Guide to the Human Genome
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Name: AKAP11 Sequence: fasta or formatted (1901aa) NCBI GI: 7706457
Description:

A-kinase anchor protein 11

Referenced in:

Cyclic Nucleotides

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4        121           2
 C cysteine            2.4         45           1
 D aspartate           6.2        117           4
 E glutamate           8.3        157           4
 F phenylalanine       4.1         77           2
 G glycine             3.7         71           2
 H histidine           3.0         57           2
 I isoleucine          3.9         74           2
 K lysine              7.6        145           2
 L leucine             8.9        169           2
 M methionine          1.6         31           1
 N asparagine          4.6         88           2
 P proline             4.7         90           2
 Q glutamine           4.7         89           2
 R arginine            2.7         51           2
 S serine             12.9        245           3
 T threonine           5.8        111           2
 V valine              6.0        114           2
 W tryptophan          0.4          7           1
 Y tyrosine            2.2         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A-kinase anchor protein 11 
SPHKAP                0.037   sphingosine kinase type 1-interacting protein isofo...
SPHKAP                0.033   sphingosine kinase type 1-interacting protein isofo...
AKAP3                 0.008   A-kinase anchor protein 3 
AKAP4                 0.007   A-kinase anchor protein 4 isoform 2 
AKAP4                 0.007   A-kinase anchor protein 4 isoform 1 
PDLIM1                0.005   PDZ and LIM domain 1 
LEO1                  0.004   Leo1, Paf1/RNA polymerase II complex component, homo...
EPS15L1               0.003   epidermal growth factor receptor pathway substrate 1...
SYTL2                 0.003   synaptotagmin-like 2 isoform i 
SYTL2                 0.003   synaptotagmin-like 2 isoform g 
DSPP                  0.003   dentin sialophosphoprotein preproprotein 
ZNF532                0.003   zinc finger protein 532 
LOC100294335          0.003   PREDICTED: similar to c114 SLIT-like testicular pro...
LOC100294335          0.003   PREDICTED: similar to c114 SLIT-like testicular pro...
LRRC37A2              0.003   c114 SLIT-like testicular protein 
LRRC37A               0.003   leucine rich repeat containing 37A 
LRRC37A3              0.003   leucine rich repeat containing 37, member A3 
SYTL2                 0.003   synaptotagmin-like 2 isoform a 
IFNAR2                0.003   interferon alpha/beta receptor 2 isoform a precursor...
MYO5B                 0.003   myosin VB 
AKAP9                 0.003   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.003   A-kinase anchor protein 9 isoform 3 
HEATR7B2              0.003   HEAT repeat family member 7B2 
TNRC6C                0.003   trinucleotide repeat containing 6C isoform 1 
TNRC6C                0.003   trinucleotide repeat containing 6C isoform 2 
ARHGAP26              0.003   GTPase regulator associated with the focal adhesion k...
NOLC1                 0.003   nucleolar and coiled-body phosphoprotein 1 
FAM65C                0.003   hypothetical protein LOC140876 
ARID4B                0.003   AT rich interactive domain 4B isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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