PICALM 33209

Name: PICALM	Sequence: fasta or formatted (652aa)		NCBI GI: 56788366
Description: phosphatidylinositol-binding clathrin assembly protein isoform 1		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [610aa] phosphatidylinositol-binding clathrin assembly protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 52 2 C cysteine 0.5 3 1 D aspartate 5.2 34 2 E glutamate 3.8 25 3 F phenylalanine 4.1 27 1 G glycine 6.0 39 2 H histidine 1.8 12 2 I isoleucine 4.4 29 2 K lysine 6.1 40 3 L leucine 9.5 62 2 M methionine 3.2 21 1 N asparagine 5.5 36 1 P proline 6.3 41 2 Q glutamine 4.4 29 2 R arginine 3.1 20 2 S serine 10.0 65 3 T threonine 8.6 56 2 V valine 6.6 43 3 W tryptophan 0.8 5 1 Y tyrosine 2.0 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phosphatidylinositol-binding clathrin assembly prote... PICALM 0.898 phosphatidylinositol-binding clathrin assembly prote... SNAP91 0.384 synaptosomal-associated protein, 91kDa homolog MUC17 0.018 mucin 17 MUC2 0.013 mucin 2 precursor MUC6 0.012 mucin 6, gastric LOC284297 0.010 hypothetical protein LOC284297 CDX1 0.010 caudal type homeobox 1 ERC1 0.010 RAB6-interacting protein 2 isoform epsilon ERC1 0.010 RAB6-interacting protein 2 isoform delta ATRX 0.010 transcriptional regulator ATRX isoform 2 ATRX 0.010 transcriptional regulator ATRX isoform 1 AGFG1 0.010 HIV-1 Rev binding protein isoform 4 AGFG1 0.010 HIV-1 Rev binding protein isoform 3 AGFG1 0.010 HIV-1 Rev binding protein isoform 1 AGFG1 0.010 HIV-1 Rev binding protein isoform 2 GRM5 0.009 glutamate receptor, metabotropic 5 isoform b precurso... MLL2 0.009 myeloid/lymphoid or mixed-lineage leukemia 2 CLINT1 0.008 epsin 4 WNK1 0.008 WNK lysine deficient protein kinase 1 LOC100132635 0.008 PREDICTED: similar to mucin 5, partial LOC100133408 0.008 PREDICTED: similar to mucin LOC100132738 0.008 PREDICTED: similar to hCG1817845 NUMA1 0.008 nuclear mitotic apparatus protein 1 LOC100133698 0.007 PREDICTED: hypothetical protein MUC12 0.007 PREDICTED: mucin 12 MACF1 0.007 microfilament and actin filament cross-linker protei... MACF1 0.007 microfilament and actin filament cross-linker protei... SYNE2 0.007 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.007 spectrin repeat containing, nuclear envelope 2 isof... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.