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Search of human proteins with 21450861
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21450861 attractin isoform 1 [Homo sapiens]
(1429 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21450861 attractin isoform 1 [Homo sapiens] 3051 0.0
gi|21450863 attractin isoform 2 [Homo sapiens] 2733 0.0
gi|46410931 attractin-like 1 [Homo sapiens] 1771 0.0
gi|145701025 multiple EGF-like-domains 8 [Homo sapiens] 213 1e-54
gi|38788416 laminin, alpha 1 precursor [Homo sapiens] 79 3e-14
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 77 9e-14
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 77 9e-14
gi|5453579 bone morphogenetic protein 1 isoform 3 precursor [Hom... 75 5e-13
gi|119703755 laminin, beta 2 precursor [Homo sapiens] 74 8e-13
gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens] 73 2e-12
gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens] 73 2e-12
gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens] 73 2e-12
gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens] 73 2e-12
gi|145309326 laminin, gamma 1 precursor [Homo sapiens] 72 3e-12
gi|143770880 laminin, beta 4 [Homo sapiens] 72 4e-12
gi|22547221 tolloid-like 1 [Homo sapiens] 72 4e-12
gi|6912724 tolloid-like 2 [Homo sapiens] 71 9e-12
gi|92110053 CUB and Sushi multiple domains 2 [Homo sapiens] 70 1e-11
gi|219842266 usherin isoform B [Homo sapiens] 69 2e-11
gi|219842259 usherin isoform A [Homo sapiens] 69 2e-11
gi|181336739 multiple EGF-like-domains 11 [Homo sapiens] 69 3e-11
gi|38045890 CUB and Sushi multiple domains 3 isoform 2 [Homo sap... 68 7e-11
gi|205277354 CUB and Sushi multiple domains 3 isoform 3 [Homo sa... 68 7e-11
gi|38045888 CUB and Sushi multiple domains 3 isoform 1 [Homo sap... 68 7e-11
gi|16945972 kelch domain containing 3 [Homo sapiens] 68 7e-11
gi|164414431 netrin G1 isoform 1 [Homo sapiens] 67 2e-10
gi|110611156 laminin, gamma 3 precursor [Homo sapiens] 67 2e-10
gi|126091152 cubilin [Homo sapiens] 66 2e-10
gi|50659100 regeneration associated muscle protease isoform b [H... 66 2e-10
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 65 5e-10
>gi|21450861 attractin isoform 1 [Homo sapiens]
Length = 1429
Score = 3051 bits (7910), Expect = 0.0
Identities = 1429/1429 (100%), Positives = 1429/1429 (100%)
Query: 1 MVAAAAATEARLRRRTAATAALAGRSGGPHWDWDVTRAGRPGLGAGLRLPRLLSPPLRPR 60
MVAAAAATEARLRRRTAATAALAGRSGGPHWDWDVTRAGRPGLGAGLRLPRLLSPPLRPR
Sbjct: 1 MVAAAAATEARLRRRTAATAALAGRSGGPHWDWDVTRAGRPGLGAGLRLPRLLSPPLRPR 60
Query: 61 LLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVC 120
LLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVC
Sbjct: 61 LLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVC 120
Query: 121 PAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE 180
PAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE
Sbjct: 121 PAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE 180
Query: 181 CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTG 240
CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTG
Sbjct: 181 CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTG 240
Query: 241 FNITYSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICN 300
FNITYSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICN
Sbjct: 241 FNITYSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICN 300
Query: 301 SSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWVVGGYM 360
SSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWVVGGYM
Sbjct: 301 SSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWVVGGYM 360
Query: 361 FNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNE 420
FNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNE
Sbjct: 361 FNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNE 420
Query: 421 LRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEY 480
LRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEY
Sbjct: 421 LRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEY 480
Query: 481 DLDKNTWSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVD 540
DLDKNTWSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVD
Sbjct: 481 DLDKNTWSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVD 540
Query: 541 TQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRW 600
TQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRW
Sbjct: 541 TQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRW 600
Query: 601 SVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAA 660
SVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAA
Sbjct: 601 SVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAA 660
Query: 661 GPGIRCVWNTGSSQCISWALATDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDC 720
GPGIRCVWNTGSSQCISWALATDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDC
Sbjct: 661 GPGIRCVWNTGSSQCISWALATDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDC 720
Query: 721 HWCNDHCVPRNHSCSEGQISIFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQEC 780
HWCNDHCVPRNHSCSEGQISIFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQEC
Sbjct: 721 HWCNDHCVPRNHSCSEGQISIFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQEC 780
Query: 781 IALPENICGIGWHLVGNSCLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLR 840
IALPENICGIGWHLVGNSCLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLR
Sbjct: 781 IALPENICGIGWHLVGNSCLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLR 840
Query: 841 IMQSSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPS 900
IMQSSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPS
Sbjct: 841 IMQSSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPS 900
Query: 901 TRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVD 960
TRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVD
Sbjct: 901 TRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVD 960
Query: 961 SNAYVASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGS 1020
SNAYVASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGS
Sbjct: 961 SNAYVASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGS 1020
Query: 1021 YKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKC 1080
YKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKC
Sbjct: 1021 YKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKC 1080
Query: 1081 ENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLC 1140
ENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLC
Sbjct: 1081 ENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLC 1140
Query: 1141 EVENRYQGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINAS 1200
EVENRYQGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINAS
Sbjct: 1141 EVENRYQGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINAS 1200
Query: 1201 KNFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNF 1260
KNFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNF
Sbjct: 1201 KNFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNF 1260
Query: 1261 TWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLLREM 1320
TWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLLREM
Sbjct: 1261 TWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLLREM 1320
Query: 1321 QQMASRPFASVNVALETDEEPPDLIGGSIKTVPKPIALEPCFGNKAAVLSVFVRLPRGLG 1380
QQMASRPFASVNVALETDEEPPDLIGGSIKTVPKPIALEPCFGNKAAVLSVFVRLPRGLG
Sbjct: 1321 QQMASRPFASVNVALETDEEPPDLIGGSIKTVPKPIALEPCFGNKAAVLSVFVRLPRGLG 1380
Query: 1381 GIPPPGQSGLAVASALVDISQQMPIVYKEKSGAVRNRKQQPPAQPGTCI 1429
GIPPPGQSGLAVASALVDISQQMPIVYKEKSGAVRNRKQQPPAQPGTCI
Sbjct: 1381 GIPPPGQSGLAVASALVDISQQMPIVYKEKSGAVRNRKQQPPAQPGTCI 1429
>gi|21450863 attractin isoform 2 [Homo sapiens]
Length = 1272
Score = 2733 bits (7084), Expect = 0.0
Identities = 1268/1272 (99%), Positives = 1269/1272 (99%)
Query: 1 MVAAAAATEARLRRRTAATAALAGRSGGPHWDWDVTRAGRPGLGAGLRLPRLLSPPLRPR 60
MVAAAAATEARLRRRTAATAALAGRSGGPHWDWDVTRAGRPGLGAGLRLPRLLSPPLRPR
Sbjct: 1 MVAAAAATEARLRRRTAATAALAGRSGGPHWDWDVTRAGRPGLGAGLRLPRLLSPPLRPR 60
Query: 61 LLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVC 120
LLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVC
Sbjct: 61 LLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVC 120
Query: 121 PAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE 180
PAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE
Sbjct: 121 PAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE 180
Query: 181 CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTG 240
CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTG
Sbjct: 181 CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTG 240
Query: 241 FNITYSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICN 300
FNITYSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICN
Sbjct: 241 FNITYSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICN 300
Query: 301 SSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWVVGGYM 360
SSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWVVGGYM
Sbjct: 301 SSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWVVGGYM 360
Query: 361 FNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNE 420
FNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNE
Sbjct: 361 FNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNE 420
Query: 421 LRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEY 480
LRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEY
Sbjct: 421 LRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEY 480
Query: 481 DLDKNTWSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVD 540
DLDKNTWSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVD
Sbjct: 481 DLDKNTWSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVD 540
Query: 541 TQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRW 600
TQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRW
Sbjct: 541 TQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRW 600
Query: 601 SVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAA 660
SVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAA
Sbjct: 601 SVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAA 660
Query: 661 GPGIRCVWNTGSSQCISWALATDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDC 720
GPGIRCVWNTGSSQCISWALATDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDC
Sbjct: 661 GPGIRCVWNTGSSQCISWALATDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDC 720
Query: 721 HWCNDHCVPRNHSCSEGQISIFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQEC 780
HWCNDHCVPRNHSCSEGQISIFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQEC
Sbjct: 721 HWCNDHCVPRNHSCSEGQISIFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQEC 780
Query: 781 IALPENICGIGWHLVGNSCLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLR 840
IALPENICGIGWHLVGNSCLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLR
Sbjct: 781 IALPENICGIGWHLVGNSCLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLR 840
Query: 841 IMQSSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPS 900
IMQSSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPS
Sbjct: 841 IMQSSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPS 900
Query: 901 TRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVD 960
TRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVD
Sbjct: 901 TRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVD 960
Query: 961 SNAYVASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGS 1020
SNAYVASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGS
Sbjct: 961 SNAYVASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGS 1020
Query: 1021 YKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKC 1080
YKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKC
Sbjct: 1021 YKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKC 1080
Query: 1081 ENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLC 1140
ENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLC
Sbjct: 1081 ENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLC 1140
Query: 1141 EVENRYQGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINAS 1200
EVENRYQGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINAS
Sbjct: 1141 EVENRYQGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINAS 1200
Query: 1201 KNFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNF 1260
KNFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNF
Sbjct: 1201 KNFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNF 1260
Query: 1261 TWPIKIQIAFSQ 1272
TWPIKIQ+ Q
Sbjct: 1261 TWPIKIQVQTEQ 1272
>gi|46410931 attractin-like 1 [Homo sapiens]
Length = 1379
Score = 1771 bits (4586), Expect = 0.0
Identities = 818/1341 (60%), Positives = 1021/1341 (76%), Gaps = 36/1341 (2%)
Query: 103 RPCVNGGRCNPG---TGQCVCPAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCT 159
+PC G C G C+C GWVG+QCQHC GRF+LT SG++TDGP NYKYKTKCT
Sbjct: 61 KPCERTGSCFSGRCVNSTCLCDPGWVGDQCQHCQGRFKLTEPSGYLTDGPINYKYKTKCT 120
Query: 160 WLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEV 219
WLIEG PN ++RLRFNHFATECSWDH+YVYDGDSIYAPL+A SGLIVPE GNETVPEV
Sbjct: 121 WLIEGYPNAVLRLRFNHFATECSWDHMYVYDGDSIYAPLIAVLSGLIVPEIRGNETVPEV 180
Query: 220 VATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGECKISNSSDT-VECECSENWK 278
V TSGYALLHFFSDAAYNLTGFNI YS + CPNNCSG G+C S S + V CEC + WK
Sbjct: 181 VTTSGYALLHFFSDAAYNLTGFNIFYSINSCPNNCSGHGKCTTSVSVPSQVYCECDKYWK 240
Query: 279 GEACDIPHCTDNCGFPHRGICNSSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLK 338
GEACDIP+C NCG P G C+ + + C C WQGP CS+ VP+ +S+W
Sbjct: 241 GEACDIPYCKANCGSPDHGYCDLTGEKLCVCNDSWQGPDCSLNVPSTESYWILPNVKPFS 300
Query: 339 --LPRASHKAVVNGNIMWVVGGYMFNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHS 396
+ RASHKAV++G MWV+GGY FN+S + MVL Y+L S W + + RYGHS
Sbjct: 301 PSVGRASHKAVLHGKFMWVIGGYTFNYSSFQMVLNYNLESSIW-NVGTPSRGPLQRYGHS 359
Query: 397 LALYKDKIYMYGGKIDST-GNVTNELRVFHIHNESWVLLTPKAK---EQYAVVGHSAHIV 452
LALY++ I+MYGG+I++ GNVT+EL VF+IH++SW TP +QYAV GHSAHI+
Sbjct: 360 LALYQENIFMYGGRIETNDGNVTDELWVFNIHSQSWSTKTPTVLGHGQQYAVEGHSAHIM 419
Query: 453 TLKNGRVVMLVIFGHCPLYGYISNVQEYDLDKNTWSILHTQGALVQGGYGHSSVYDHRTR 512
L + VVM++IFG+ +YGY S++QEY + NTW + T+GA+VQGGYGH+SVYD T+
Sbjct: 420 ELDSRDVVMIIIFGYSAIYGYTSSIQEYHISSNTWLVPETKGAIVQGGYGHTSVYDEITK 479
Query: 513 ALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTILKDSRFFRYLHTAVIVSGTMLVFGGN 572
++YVHGGYKA NKY L DDLY+Y+V+T+ WTILK+S F RYLH+AV+++G ML+FGGN
Sbjct: 480 SIYVHGGYKALPGNKYGLVDDLYKYEVNTKTWTILKESGFARYLHSAVLINGAMLIFGGN 539
Query: 573 THNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGF 632
THNDTS+S+GAKCFS+DF+AYDIACD W +LP+P+LH DVNRFGHSAV+ N +MY+FGGF
Sbjct: 540 THNDTSLSNGAKCFSADFLAYDIACDEWKILPKPNLHRDVNRFGHSAVVINGSMYIFGGF 599
Query: 633 NSLLLSDILVFTSEQCDAHRSEAACLAAGPGIRCVWNTGSSQCISWALATDEQEEKLKSE 692
+S+LL+DILV+ C A R E C AGPGI+CVWN + C SW + L+++
Sbjct: 600 SSVLLNDILVYKPPNCKAFRDEELCKNAGPGIKCVWN--KNHCESWE--SGNTNNILRAK 655
Query: 693 CFSKRTLDHDRCDQHTDCYSCTANTNDCHWCNDH-CVPRNHSCSEGQISIFRYENCPKDN 751
C K DRC ++ DC SCTANTN C WC+D C+ N +CS +S+ Y C N
Sbjct: 656 CPPKTAASDDRCYRYADCASCTANTNGCQWCDDKKCISANSNCS---MSVKNYTKCHVRN 712
Query: 752 PMYYCNKKTSCRSCALDQNCQWEPRNQECIALPENICGIGWHLVGNSCLKITTAKENYDN 811
CNK TSC+SC+L+ NCQW+ R QEC ALP ++CG GW +G++CL++ +++ENYDN
Sbjct: 713 EQI-CNKLTSCKSCSLNLNCQWDQRQQECQALPAHLCGEGWSHIGDACLRVNSSRENYDN 771
Query: 812 AKLFCRNHNALLASLTTQKKVEFVLKQLRIMQSSQSMSKLTLTPWVGLRKINVSYWCWED 871
AKL+C N + LASLTT K+VEFVL ++ Q ++ ++PWVGLRKIN+SYW WED
Sbjct: 772 AKLYCYNLSGNLASLTTSKEVEFVLDEI------QKYTQQKVSPWVGLRKINISYWGWED 825
Query: 872 MSPFTNSLLQWMPSEPSDAGFCGILSEPSTRGLKAATCINPLNGSVCERPA---NHSAKQ 928
MSPFTN+ LQW+P EP+D+GFC L + GLKA C + NG VCE+P N +A+
Sbjct: 826 MSPFTNTTLQWLPGEPNDSGFCAYLERAAVAGLKANPCTSMANGLVCEKPVVSPNQNARP 885
Query: 929 CRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMSTCPPENCS 988
C+ PC+LRT+C +CTS ECMWCS+ K+CVDSNAY+ SFP+GQC+EW T +TC P+NCS
Sbjct: 886 CKKPCSLRTSCSNCTSNGMECMWCSSTKRCVDSNAYIISFPYGQCLEWQT-ATCSPQNCS 944
Query: 989 GYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCL 1048
G TC CLEQPGCGWC DPSNTG+G CIEGS +GP+K+ G + + +L++++C
Sbjct: 945 GLRTCGQCLEQPGCGWCNDPSNTGRGHCIEGSSRGPMKL-----IGMHHSEMVLDTNLCP 999
Query: 1049 EDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQP 1108
++ Y WSFI CPACQCNGHS CIN ++CE+C+NLTTGK C+ C+ G+YGDPTNGG+C
Sbjct: 1000 KEKNYEWSFIQCPACQCNGHSTCINNNVCEQCKNLTTGKQCQDCMPGYYGDPTNGGQCTA 1059
Query: 1109 CKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLRGTCYYTLLIDYQFTFS 1168
C C+GHA++C+ +TGKCFCTTKG+KGD+CQLC+ ENRY GNPLRGTCYY+LLIDYQFTFS
Sbjct: 1060 CTCSGHANICHLHTGKCFCTTKGIKGDQCQLCDSENRYVGNPLRGTCYYSLLIDYQFTFS 1119
Query: 1169 LSQEDDRYYTAINFVATPDEQNRDLDMFINASKNFNLNITWAASFSAGTQAGEEMPVVSK 1228
L QEDDR++TAINF+A P++ N++LD+ INAS NFNLNITW+ +AGT +GEE +VSK
Sbjct: 1120 LLQEDDRHHTAINFIANPEQSNKNLDISINASNNFNLNITWSVGSTAGTISGEETSIVSK 1179
Query: 1229 TNIKEYKDSFSNEKFDFRNHPNITFFVYVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFS 1288
NIKEY+DSFS EKF+FR++PNITF+VYVSNF+WPIKIQIAFSQH+ MDLVQFFVTFFS
Sbjct: 1180 NNIKEYRDSFSYEKFNFRSNPNITFYVYVSNFSWPIKIQIAFSQHNTIMDLVQFFVTFFS 1239
Query: 1289 CFLSLLLVAAVVWKIKQSCWASRRREQLLREMQQMASRPFASVNVALETDEEPPDLIGGS 1348
CFLSLLLVAAVVWKIKQ+CWASRRREQLLRE QQMASRPFASV+VALE E + + G
Sbjct: 1240 CFLSLLLVAAVVWKIKQTCWASRRREQLLRERQQMASRPFASVDVALEVGAEQTEFLRGP 1299
Query: 1349 IKTVPKPIALEPCFGNKAAVLSVFVRLPRGLGGIPPPGQSGLAVASALVDISQQMPIVYK 1408
++ PKPIA+EPC GN+AAVL+VF+ LPRG G PPPGQSGLA+ASAL+DISQQ K
Sbjct: 1300 LEGAPKPIAIEPCAGNRAAVLTVFLCLPRGSSGAPPPGQSGLAIASALIDISQQKASDSK 1359
Query: 1409 EKSGAVRNRKQQPPAQPGTCI 1429
+K+ VRNRK Q GTC+
Sbjct: 1360 DKTSGVRNRKHLSTRQ-GTCV 1379
>gi|145701025 multiple EGF-like-domains 8 [Homo sapiens]
Length = 2778
Score = 213 bits (542), Expect = 1e-54
Identities = 159/536 (29%), Positives = 239/536 (44%), Gaps = 49/536 (9%)
Query: 133 GGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEG-QPNRIMRLRFNHFATECSWDHLYVYDG 191
G R L + GFVTDG GNY C WLIE P + L F TEC++D+L+VYDG
Sbjct: 32 GQRQVLREAPGFVTDGAGNYSVNGNCEWLIEAPSPQHRILLDFLFLDTECTYDYLFVYDG 91
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCP 251
DS PL+A+ SG P P + A+SG LLH FSDA YNL GFN ++ F +CP
Sbjct: 92 DSPRGPLLASLSGSTRP--------PPIEASSGKMLLHLFSDANYNLLGFNASFRFSLCP 143
Query: 252 NNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSCFS 311
C G+C+ C C W G C + C+ CG G C +S + C C
Sbjct: 144 GGCQSHGQCQPPG-----VCACEPGWGGPDCGLQECSAYCG--SHGTC-ASPLGPCRCEP 195
Query: 312 DWQGPGCSVPVPANQ--SFW----TREEYSNLKLPRASHKAVVNGNIMWVVGGYMFNHSD 365
+ G C + + NQ +W R+ + ++ A G ++ V GG N++
Sbjct: 196 GFLGRACDLHLWENQGAGWWHNVSARDPAFSARIGAAGAFLSPPG-LLAVFGGQDLNNAL 254
Query: 366 YNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNELRVFH 425
++VL Y+ ++ W + S R+ H + + + GG++ + G++TN++ F
Sbjct: 255 GDLVL-YNFSANTWESWDLS-PAPAARHSHVAVAWAGSLVLMGGEL-ADGSLTNDVWAFS 311
Query: 426 -IHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEYDLDK 484
+ W LL P A G + H L + V + V G P + S + + LD
Sbjct: 312 PLGRGHWELLAPPASSSSGPPGLAGHAAALVDD-VWLYVSGGRTPHDLFSSGLFRFRLDS 370
Query: 485 NT---WSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVDT 541
+ W + G GHS V+ +RAL VHGG++ +A + + VD
Sbjct: 371 TSGGYWEQVIPAGGRPPAATGHSMVFHAPSRALLVHGGHRPSTARFSVRVNSTELFHVDR 430
Query: 542 QMWTILKDSRFF-----RYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIA 596
+WT LK R HTA ++ M+V+GGN H KC+ Y +
Sbjct: 431 HVWTTLKGRDGLQGPRERAFHTASVLGNYMVVYGGNVHTHYQEE---KCYEDGIFFYHLG 487
Query: 597 CDRW--------SVLPRPDLHHDVNRFGH-SAVLHNSTMYVFGGFNSLLLSDILVF 643
C +W P R+ H +AVL S + V GG++ D++ +
Sbjct: 488 CHQWVSGAELAPPGTPEGRAAPPSGRYSHVAAVLGGSVLLVAGGYSGRPRGDLMAY 543
Score = 143 bits (361), Expect = 1e-33
Identities = 198/836 (23%), Positives = 298/836 (35%), Gaps = 197/836 (23%)
Query: 103 RPC-VNG------GRCNPGTGQCVCPAGWVGEQCQ------------------HCGGRFR 137
RPC NG G C+ +G C C G CQ CGGR
Sbjct: 1142 RPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGDPRAGGSCFRECGGRAL 1201
Query: 138 LTGSS-----------------GFVTDGPGNYKYKTKCTWLIEGQ-------PNRI---M 170
LT S G GPG + C W++ P + +
Sbjct: 1202 LTNVSSVALGSRRVGGLLPPGGGAARAGPG----LSYCVWVVSATEELQPCAPGTLCPPL 1257
Query: 171 RLRFN-HFATECSWDHLYVYDGDSIYAP---------LVAAFSGLIVPERDGNETVPEVV 220
L F+ +T C+ ++ +DG + L+AAF G RD TV
Sbjct: 1258 TLTFSPDSSTPCTLSYVLAFDGFPRFLDTGVVQSDRSLIAAFCG---QRRDRPLTVQ--- 1311
Query: 221 ATSGYALLHFFSDAAYNLTGFNITYSFDMC----PNNCSGRGECKISNSSDTVE-CECSE 275
A SG +LH+ ++ + + GFN + C P +C EC + + C C +
Sbjct: 1312 ALSGLLVLHWEANGSSSW-GFNASVGSARCGSGGPGSCPVPQECVPQDGAAGAGLCRCPQ 1370
Query: 276 NWKGEACDIPHCTDNCG-FPHRGICNSSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEY 334
W G C + C +NC G CN S + C C + GP C+ + Q W
Sbjct: 1371 GWAGPHCRMALCPENCNAHTGAGTCNQS-LGVCICAEGFGGPDCATKLDGGQLVWETLMD 1429
Query: 335 SNLKLPRASH------KAVVNGN--IMWVVGGYMFNHSDYNMVLAYDLASREWLPLNRSV 386
S L AS +V+G +W+ GG + Y ++ R W +
Sbjct: 1430 SRLSADTASRFLHRLGHTMVDGPDATLWMFGGLGLPQGLLGNLYRYSVSERRWTQMLAGA 1489
Query: 387 NN----VVVRYGHSLALY---KDKIYMYGGKIDSTGNVTNELRVFHIHNESWVL-LTPKA 438
+ R H+ A + +Y+ GG + G VT + V ++ W P+
Sbjct: 1490 EDGGPGPSPRSFHAAAYVPAGRGAMYLLGGL--TAGGVTRDFWVLNLTTLQWRQEKAPQT 1547
Query: 439 KEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEYDLDKNTWSILHTQGALVQ 498
E AV GH+ +T + G + +L++ G+ P G+ + EY L TW G
Sbjct: 1548 VELPAVAGHT---LTARRG-LSLLLVGGYSPENGFNQQLLEYQLATGTWVSGAQSGTPPT 1603
Query: 499 GGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTILKDSR------- 551
G YGHS+VY T +LYV GG++ F + +LY + W++L S+
Sbjct: 1604 GLYGHSAVYHEATDSLYVFGGFR-FHVELAAPSPELYSLHCPDRTWSLLAPSQGAKRDRM 1662
Query: 552 ---------------------FFRYLHTAVIVSGTMLVFGG-----NTH----------- 574
FR + + + + GG + H
Sbjct: 1663 RNVRGSSRGLGQVPGEQPGSWGFREVRKKMALWAALAGTGGFLEEISPHLKEPRPRLFHA 1722
Query: 575 ----NDTSMSHGAKC----FSSDFMAYDIACDRWSVLPRPDLHHDVN-------RFGHSA 619
DT + G + FSSD + Y + C+ W + PDL + H+
Sbjct: 1723 SALLGDTMVVLGGRSDPDEFSSDVLLYQVNCNAWLL---PDLTRSASVGPPMEESVAHAV 1779
Query: 620 VLHNSTMYVFGGFNSLLLSDILVFT--SEQCDAHRSEAACLAAGPGIRCVW--------- 668
S +Y+ GGF + L +L T + C S AC +G C W
Sbjct: 1780 AAVGSRLYISGGFGGVALGRLLALTLPPDPCRLLSSPEACNQSG---ACTWCHGACLSGD 1836
Query: 669 -----NTGSSQCISWALATDE-QEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDCHW 722
G S C + +E + + SEC ++ H R Q D A+T C W
Sbjct: 1837 QAHRLGCGGSPCSPMPRSPEECRRLRTCSECLAR----HPRTLQPGD---GEASTPRCKW 1889
Query: 723 CND----HCVPRNHSC-SEGQISIFRYENCPKDNPMYYCNKKTSCRSCALDQNCQW 773
C + C+ RN SC SE I + E N C C + C W
Sbjct: 1890 CTNCPEGACIGRNGSCTSENDCRINQREVFWAGNCSEAACGAADCEQCTREGKCMW 1945
Score = 97.1 bits (240), Expect = 1e-19
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 27/190 (14%)
Query: 920 RPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTM 979
R A S ++C C+ R C DC + SS+C WC + C AY+A +P G C W
Sbjct: 870 RGALKSPEECPPLCSQRLTCEDCLANSSQCAWCQSTHTCFLFAAYLARYPHGGCRGWDDS 929
Query: 980 STCPP--ENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFY 1037
P +C G+ TC CL+ CGWC + N G+C++G + GP+ + +
Sbjct: 930 VHSEPRCRSCDGFLTCHECLQSHECGWCGNEDNPTLGRCLQGDFSGPL----GGGNCSLW 985
Query: 1038 PQPLLNSSMCLEDSRYNWSFIHCP--------ACQCNGHSKCINQSICEKCENLTTGKHC 1089
L + L W++ CP +C+ + C+N + +C HC
Sbjct: 986 VGEGLGLPVALP---ARWAYARCPDVDECRLGLARCHPRATCLNTPLSYEC-------HC 1035
Query: 1090 ETCISGFYGD 1099
+ G+ GD
Sbjct: 1036 Q---RGYQGD 1042
Score = 95.5 bits (236), Expect = 3e-19
Identities = 77/284 (27%), Positives = 107/284 (37%), Gaps = 78/284 (27%)
Query: 908 TCINPLNGSVCERPANHSAK-QCRTPCALRTACGDCTS------GSSECMWCSNMKQCVD 960
TC + +V P S C TPC L C C G C+W S+++QC+
Sbjct: 1968 TCFSHSLLNVSPMPVESSPPLPCPTPCHLLPNCTSCLDSKGADGGWQHCVWSSSLQQCLS 2027
Query: 961 SNAYVASFPFGQCMEWYTMSTCPPENCSGYCT----CSHCLEQPGCGWCTDPSNTGKGKC 1016
+ G C PE+CS C C+ CL +P CGWC G G+C
Sbjct: 2028 PSYLPLRCMAGGCGRLLR----GPESCSLGCAQATQCALCLRRPHCGWCAWGGQDGGGRC 2083
Query: 1017 IEGSYKGP---------------VKMPSQ----------APTGNFYPQP----------- 1040
+EG GP + P + T N + QP
Sbjct: 2084 MEGGLSGPRDGLTCGRPGASWAFLSCPPEDECANGHHDCNETQNCHDQPHGYECSCKTGY 2143
Query: 1041 ----------------LLNSSMCLEDS--RYNWSFI--HCPA-CQCNGHSKCIN---QSI 1076
+N S C+E R ++ F+ +C C+CN HS+C +
Sbjct: 2144 TMDNMTGLCRPVCAQGCVNGS-CVEPDHCRCHFGFVGRNCSTECRCNRHSECAGVGARDH 2202
Query: 1077 CEKCENLTTGKHCETCISGFYGDPTNGGKCQPCK--CNGHASLC 1118
C C N T G HCE C+ F G GG C+PC C G++ +C
Sbjct: 2203 CLLCRNHTKGSHCEQCLPLFVGSAVGGGTCRPCHAFCRGNSHIC 2246
Score = 83.6 bits (205), Expect = 1e-15
Identities = 77/292 (26%), Positives = 112/292 (38%), Gaps = 88/292 (30%)
Query: 924 HSAKQCRTPCALRTACGDCTSGSSECMWCSN-----MKQCVDSNAYVASFPFGQCMEW-- 976
HS +CR+ C C +C S EC WC N + +C+ + + G C W
Sbjct: 931 HSEPRCRS-CDGFLTCHECLQ-SHECGWCGNEDNPTLGRCLQGD-FSGPLGGGNCSLWVG 987
Query: 977 ------------YTMSTCPPEN--------CSGYCTC--------------------SHC 996
+ + CP + C TC SHC
Sbjct: 988 EGLGLPVALPARWAYARCPDVDECRLGLARCHPRATCLNTPLSYECHCQRGYQGDGISHC 1047
Query: 997 ----LEQPGCGWCTDPSNTGKGKCI-EGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDS 1051
LE G G C+ P + C+ + + + P+ AP P P C D
Sbjct: 1048 NRTCLEDCGHGVCSGPPDF---TCVCDLGWTSDLPPPTPAPGP---PAP-----RCSRD- 1095
Query: 1052 RYNWSFIHCPACQCNGHSKCINQS--ICEKCENLTTGKHCETCISGFYGDPTNGGKCQPC 1109
C C+ HS C + C++C++ T G+HCE C G +G+ T C+PC
Sbjct: 1096 -----------CGCSFHSHCRKRGPGFCDECQDWTWGEHCERCRPGSFGNATGSRGCRPC 1144
Query: 1110 KCNGHA----SLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNP-LRGTCY 1156
+CNGH C+ +G CFC +G CQLC Y G+P G+C+
Sbjct: 1145 QCNGHGDPRRGHCDNLSGLCFCQDH-TEGAHCQLC--SPGYYGDPRAGGSCF 1193
Score = 67.4 bits (163), Expect = 9e-11
Identities = 108/449 (24%), Positives = 162/449 (36%), Gaps = 105/449 (23%)
Query: 704 CDQHTDCYSCTANTNDCHWCNDHCVPRNHSCS---EGQISIFRYENCPKDNPMYYCNKKT 760
C++H DC++CT + C W + +CS G+ ++ E CP C+++
Sbjct: 834 CEEHRDCHACTQDP-FCEWHQSTSRKGDAACSRRGRGRGALKSPEECPP-----LCSQRL 887
Query: 761 SCRSC-ALDQNCQWEPRNQECIAL-------PENICGIGWHLVGNSCLKITTAKENYDNA 812
+C C A C W C P C GW ++ ++
Sbjct: 888 TCEDCLANSSQCAWCQSTHTCFLFAAYLARYPHGGCR-GW--------------DDSVHS 932
Query: 813 KLFCRNHNALLASLTTQKKVEFVLKQLRIMQSSQSMSKLTLTPWVG-LRKINVSYWCWED 871
+ CR+ + LT + ++ + + ++ + + G L N S W E
Sbjct: 933 EPRCRSCDGF---LTCHECLQSHECGWCGNEDNPTLGRCLQGDFSGPLGGGNCSLWVGEG 989
Query: 872 MSPFTNSLLQWMPSEPSDAGFCGILSEPSTRGLKAATCIN-PLNGSV-CERP-ANHSAKQ 928
+ +W + D C + R ATC+N PL+ C+R
Sbjct: 990 LGLPVALPARWAYARCPDVDECRL---GLARCHPRATCLNTPLSYECHCQRGYQGDGISH 1046
Query: 929 CRTPCALRTACGDCTSGSSECMWCSNMKQ--CVDSNAYVASFPFGQCMEWYTMSTCPP-E 985
C RT DC G CS CV + + P T + PP
Sbjct: 1047 CN-----RTCLEDCGHGV-----CSGPPDFTCVCDLGWTSDLPPP------TPAPGPPAP 1090
Query: 986 NCSGYCTC---SHCLEQPGCGWCTDPSNTGKG----KCIEGSYKGPVKMPSQAPTGNFYP 1038
CS C C SHC ++ G G+C + + G +C GS+ GN
Sbjct: 1091 RCSRDCGCSFHSHCRKR-GPGFCDECQDWTWGEHCERCRPGSF------------GN--- 1134
Query: 1039 QPLLNSSMCLEDSRYNWSFIHCPACQCNGH-----SKCINQSICEKCENLTTGKHCETCI 1093
SR C CQCNGH C N S C++ T G HC+ C
Sbjct: 1135 ---------ATGSR------GCRPCQCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCS 1179
Query: 1094 SGFYGDPTNGGKCQPCKCNGHASLCNTNT 1122
G+YGDP GG C +C G A L N ++
Sbjct: 1180 PGYYGDPRAGGSCFR-ECGGRALLTNVSS 1207
Score = 62.8 bits (151), Expect = 2e-09
Identities = 55/205 (26%), Positives = 83/205 (40%), Gaps = 37/205 (18%)
Query: 986 NCSGYCTCSHCLEQPGCG---WCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLL 1042
NCS C C+ E G G C N KG E P+ + S G P
Sbjct: 2181 NCSTECRCNRHSECAGVGARDHCLLCRNHTKGSHCEQCL--PLFVGSAVGGGTCRPCHAF 2238
Query: 1043 ---NSSMCL----------EDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHC 1089
NS +C+ E +Y+ G S+ ++++C C+N + G+ C
Sbjct: 2239 CRGNSHICISRKELQMSKGEPKKYSLDPEEIENWVTEGPSE--DEAVCVNCQNNSYGEKC 2296
Query: 1090 ETCISGFYGDPTNGGKCQPCKCNGHASLC------------NTNTGKCFCTTKGVKGD-- 1135
E+C+ G++ GKC C+CNGHA C NT TG C ++ + D
Sbjct: 2297 ESCLQGYF---LLDGKCTKCQCNGHADTCNEQDGTGCPCQNNTETGTCQGSSPSDRRDCY 2353
Query: 1136 ECQLCEVENRYQGNPLRGTCYYTLL 1160
+ Q + + G+PL G Y L+
Sbjct: 2354 KYQCAKCRESFHGSPLGGQQCYRLI 2378
Score = 60.1 bits (144), Expect = 2e-08
Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 48/177 (27%)
Query: 1270 FSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQLLREMQQMASRPFA 1329
F Q +DL FF FFSCF L + ++WK KQ+ + + + L+EM +MASRPFA
Sbjct: 2572 FRQDQAHIDLFVFFSVFFSCFFLFLSLCVLLWKAKQALDQRQEQRRHLQEMTKMASRPFA 2631
Query: 1330 SVNVALETDEE-------------------------------------------PPDLIG 1346
V V D PP +
Sbjct: 2632 KVTVCFPPDPTAPASAWKPAGLPPPAFRRSEPFLAPLLLTGAGGPWGPMGGGCCPPAIPA 2691
Query: 1347 GSIKTVPKPIALEPCFGNKAAVLSVFVRLPRGLGGIPPPGQSGLAVASALVDISQQM 1403
+ PI LEP A V ++ ++LP G P +G + SALV + ++
Sbjct: 2692 TTAGLRAGPITLEPTEDGMAGVATLLLQLPGG-----PHAPNGACLGSALVTLRHRL 2743
Score = 46.2 bits (108), Expect = 2e-04
Identities = 46/214 (21%), Positives = 65/214 (30%), Gaps = 52/214 (24%)
Query: 933 CALRTACGDCTSGSSECMWCSNMKQCV--DSNAYVASFPFGQCMEWYTMSTCPPENCSGY 990
C ++C C + C WC C A+ G + + CP C +
Sbjct: 781 CTSYSSCLGCLADQG-CGWCLTSATCHLRQGGAHCGDDGAGGSLLVLVPTLCPL--CEEH 837
Query: 991 CTCSHCLEQPGCGWCTDPSNTGKGKCIE-GSYKGPVKMPSQAPTGNFYPQPLLNSSMCLE 1049
C C + P C W S G C G +G +K P + P PL + + E
Sbjct: 838 RDCHACTQDPFCEWHQSTSRKGDAACSRRGRGRGALKSPEECP-------PLCSQRLTCE 890
Query: 1050 DSRYNWSFIHCPACQ-------------------CNGHSKCIN-QSICEKCENLTTGKHC 1089
D N S C CQ C G ++ + C C+ T C
Sbjct: 891 DCLANSS--QCAWCQSTHTCFLFAAYLARYPHGGCRGWDDSVHSEPRCRSCDGFLTCHEC 948
Query: 1090 -----------------ETCISGFYGDPTNGGKC 1106
C+ G + P GG C
Sbjct: 949 LQSHECGWCGNEDNPTLGRCLQGDFSGPLGGGNC 982
Score = 38.1 bits (87), Expect = 0.061
Identities = 54/238 (22%), Positives = 76/238 (31%), Gaps = 44/238 (18%)
Query: 915 GSVCERPANHSAKQCR-----TPCALR----TACGDCTSGSSECMWCSNMKQ--CVDSNA 963
GS C P S ++CR + C R GD + + C WC+N + C+ N
Sbjct: 1845 GSPCS-PMPRSPEECRRLRTCSECLARHPRTLQPGDGEASTPRCKWCTNCPEGACIGRNG 1903
Query: 964 YVASFPFGQCM----EWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGK---- 1015
S C E + C C G C C + C W TG+ +
Sbjct: 1904 SCTSE--NDCRINQREVFWAGNCSEAAC-GAADCEQCTREGKCMWTRQFKRTGETRRILS 1960
Query: 1016 --------CIEGSYKGPVKMPSQAPTGNFYPQP---LLNSSMCLEDSRYNWSFIHC---- 1060
C S MP ++ P P L N + CL+ + + HC
Sbjct: 1961 VQPTYDWTCFSHSLLNVSPMPVESSPPLPCPTPCHLLPNCTSCLDSKGADGGWQHCVWSS 2020
Query: 1061 PACQCNGHSKCINQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLC 1118
QC S + + C L G E+C G +C C H C
Sbjct: 2021 SLQQCLSPSYLPLRCMAGGCGRLLRGP--ESCSLGC----AQATQCALCLRRPHCGWC 2072
Score = 35.4 bits (80), Expect = 0.40
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 969 PFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWC 1005
P G + ++ + +C+ Y +C CL GCGWC
Sbjct: 763 PGGSEISFFFLEPYRSSSCTSYSSCLGCLADQGCGWC 799
Score = 32.3 bits (72), Expect = 3.4
Identities = 32/103 (31%), Positives = 38/103 (36%), Gaps = 29/103 (28%)
Query: 932 PCALRTACGDCTSGSSECMWCSNMKQCVDSN-AYVASFPFGQCMEWYTMSTCP--PENCS 988
PC L ++ C S C WC C+ + A+ C S P PE C
Sbjct: 1809 PCRLLSSPEACNQ-SGACTWCHGA--CLSGDQAHRLGCGGSPC------SPMPRSPEECR 1859
Query: 989 GYCTCSHCLE------QPG--------CGWCTDPSNTGKGKCI 1017
TCS CL QPG C WCT N +G CI
Sbjct: 1860 RLRTCSECLARHPRTLQPGDGEASTPRCKWCT---NCPEGACI 1899
Score = 31.6 bits (70), Expect = 5.7
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 8/89 (8%)
Query: 1054 NWSF---IHCPACQCNGHSKCINQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCK 1110
+W F + C G C C + C C G+ G C P
Sbjct: 1328 SWGFNASVGSARCGSGGPGSCPVPQECVPQDGAAGAGLCR-CPQGWAGPHCRMALC-PEN 1385
Query: 1111 CNGH--ASLCNTNTGKCFCTTKGVKGDEC 1137
CN H A CN + G C C +G G +C
Sbjct: 1386 CNAHTGAGTCNQSLGVCIC-AEGFGGPDC 1413
Score = 31.2 bits (69), Expect = 7.5
Identities = 14/51 (27%), Positives = 19/51 (37%)
Query: 79 CEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVCPAGWVGEQC 129
C+ A G +EC C + G C G C C G++G C
Sbjct: 152 CQPPGVCACEPGWGGPDCGLQECSAYCGSHGTCASPLGPCRCEPGFLGRAC 202
>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
Length = 3075
Score = 79.0 bits (193), Expect = 3e-14
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 1060 CPACQCNGHS-KCINQSICEKCENLTTGKHCETCISGFYGDPTNG--GKCQPCKC----- 1111
C C+C+GH+ +C +C C + TTG HCE C+ GFYG+P+ G G CQPC C
Sbjct: 739 CQPCECHGHAAECNVHGVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGDCQPCACPLTIA 798
Query: 1112 -NGHASLCNTNTGK---CFCTTKGVKGDECQLCEVENRYQGNP 1150
N + C+ N G C G G C+ C + Y GNP
Sbjct: 799 SNNFSPTCHLNDGDEVVCDWCAPGYSGAWCERC--ADGYYGNP 839
Score = 67.4 bits (163), Expect = 9e-11
Identities = 52/184 (28%), Positives = 69/184 (37%), Gaps = 38/184 (20%)
Query: 987 CSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSS- 1045
C+ T HC EQ G+ +PS G C P P + NF P LN
Sbjct: 760 CAHNTTGVHC-EQCLPGFYGEPSRGTPGDC------QPCACPLTIASNNFSPTCHLNDGD 812
Query: 1046 --MC--------------LEDSRYNWSFI---HCPACQCNGHSKCINQSICE-------K 1079
+C D Y + C C C+G+ C+ K
Sbjct: 813 EVVCDWCAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGECLK 872
Query: 1080 CENLTTGKHCETCISGFYGDPTNGGKCQPCKCN---GHASLCNTNTGKCFCTTKGVKGDE 1136
C T G HCE C GFYGD C+ C+C+ H+++C+ TG C C V G +
Sbjct: 873 CLGNTDGAHCERCADGFYGDAVTAKNCRACECHVKGSHSAVCHLETGLCDC-KPNVTGQQ 931
Query: 1137 CQLC 1140
C C
Sbjct: 932 CDQC 935
Score = 65.1 bits (157), Expect = 5e-10
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 1077 CEKCENLTTGKHCETCISGFYGDP-TNGGKCQPCKCNGHASL---CNTNTGKCFCT--TK 1130
C+ C GKHCE C S +YG+P T GG CQ C CN H S+ C+ +G+C C
Sbjct: 1476 CDACLLGYEGKHCERCSSSYYGNPQTPGGSCQKCDCNPHGSVHGDCDRTSGQCVCRLGAS 1535
Query: 1131 GVKGDECQ 1138
G++ DEC+
Sbjct: 1536 GLRCDECE 1543
Score = 61.6 bits (148), Expect = 5e-09
Identities = 59/239 (24%), Positives = 84/239 (35%), Gaps = 30/239 (12%)
Query: 922 ANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMST 981
+N+ + C C C G S WC ++C D + P C+
Sbjct: 799 SNNFSPTCHLNDGDEVVCDWCAPGYSGA-WC---ERCADGYYGNPTVPGESCVPCDCSGN 854
Query: 982 CPPENCSGYCT-----CSHCL--------EQPGCGWCTDPSNTGKGKCIEGSYKGPVKMP 1028
P +G+C C CL E+ G+ D + E KG
Sbjct: 855 VDPSE-AGHCDSVTGECLKCLGNTDGAHCERCADGFYGDAVTAKNCRACECHVKGSHSAV 913
Query: 1029 SQAPTGNFYPQPLLNSSMCLE--DSRYNWSFIH-CPACQCNGHSK----CINQSICEKCE 1081
TG +P + C + Y H C C C+ C ++ C C
Sbjct: 914 CHLETGLCDCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSDGCTDEGQCH-CV 972
Query: 1082 NLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCT--TKGVKGDECQ 1138
GK C+ C GFY G C PC C + C+ TG+C C T+GVK +EC+
Sbjct: 973 PGVAGKRCDRCAHGFYA--YQDGSCTPCDCPHTQNTCDPETGECVCPPHTQGVKCEECE 1029
Score = 61.2 bits (147), Expect = 7e-09
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 1077 CEKCENLTTGKHCETCISGFY--GDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKG 1134
CE C TG CE+C+SG+Y GG CQPC+C+GHA+ CN + G C G
Sbjct: 709 CE-CPQGYTGTSCESCLSGYYRVDGILFGGICQPCECHGHAAECNVH-GVCIACAHNTTG 766
Query: 1135 DECQLCEVENRYQGNPLRGT 1154
C+ C + G P RGT
Sbjct: 767 VHCEQC--LPGFYGEPSRGT 784
Score = 57.0 bits (136), Expect = 1e-07
Identities = 43/146 (29%), Positives = 60/146 (41%), Gaps = 33/146 (22%)
Query: 1016 CIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCI--N 1073
C G ++G K+P+ + G P+PL+ C C CN HS N
Sbjct: 1376 CAPGYHRG--KLPAGSDRG---PRPLVAP---------------CVPCSCNNHSDTCDPN 1415
Query: 1074 QSICEKCENLTTGKHCETCISGFYGDPT-NGGKCQPCKC--NGHASLCNT------NTGK 1124
C C + T G HC+ C SG+YG T + C C C + AS T + +
Sbjct: 1416 TGKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHSPPASFSPTCVLEGDHDFR 1475
Query: 1125 CFCTTKGVKGDECQLCEVENRYQGNP 1150
C G +G C+ C + Y GNP
Sbjct: 1476 CDACLLGYEGKHCERC--SSSYYGNP 1499
Score = 53.1 bits (126), Expect = 2e-06
Identities = 68/284 (23%), Positives = 99/284 (34%), Gaps = 65/284 (22%)
Query: 886 EPSDAGFCGILSEPSTRGLKAATCINPLNGSVCERPANH------SAKQCRTPCALRTAC 939
+PS+AG C ++ + C+ +G+ CER A+ +AK CR AC
Sbjct: 856 DPSEAGHCDSVTGECLK------CLGNTDGAHCERCADGFYGDAVTAKNCR-------AC 902
Query: 940 GDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWY----TMSTCPPENCSGYCTCSH 995
+C S C D V QC+ Y + C P NCS + S
Sbjct: 903 -ECHVKGSHSAVCHLETGLCDCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNCSVAGSVSD 961
Query: 996 CLEQPGCGWCTDPSNTGK--GKCIEG--SYKGPVKMPSQAP---------TGNFYPQPLL 1042
G C P GK +C G +Y+ P P TG P
Sbjct: 962 GCTDEGQCHCV-PGVAGKRCDRCAHGFYAYQDGSCTPCDCPHTQNTCDPETGECVCPPHT 1020
Query: 1043 NSSMCLEDSRYNWSF---IHCPACQCN----GHSKCINQSICEKCENLTTGKHCETCISG 1095
C E +W + + C AC C+ H +C + +C++ G+ C+ C G
Sbjct: 1021 QGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTGHCQCKSKFGGRACDQCSLG 1080
Query: 1096 FYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQL 1139
+ P C PC C+ +G GD C L
Sbjct: 1081 YRDFPD----CVPCDCD----------------LRGTSGDACNL 1104
Score = 52.4 bits (124), Expect = 3e-06
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 1080 CENLTTGKHCETCISGFYGDPTNGGK----------CQPCKCNGHASLCNTNTGKCFCTT 1129
C T G C+ C G++ G C PC CN H+ C+ NTGKC
Sbjct: 1364 CPPGTVGFSCQDCAPGYHRGKLPAGSDRGPRPLVAPCVPCSCNNHSDTCDPNTGKCLNCG 1423
Query: 1130 KGVKGDECQLC 1140
GD C +C
Sbjct: 1424 DNTAGDHCDVC 1434
Score = 48.9 bits (115), Expect = 3e-05
Identities = 54/253 (21%), Positives = 84/253 (33%), Gaps = 31/253 (12%)
Query: 889 DAGFCGILSEPSTRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSE 948
+ G C +P+ G + C++ G + H + C A + G G
Sbjct: 917 ETGLCDC--KPNVTGQQCDQCLHGYYGL----DSGHGCRPCNCSVAGSVSDGCTDEGQCH 970
Query: 949 CMWCSNMKQCVDSNAYVASFPFGQCMEW---YTMSTCPPENCSGYCTCSHCLEQPGCGWC 1005
C+ K+C ++ G C +T +TC PE +G C C + C C
Sbjct: 971 CVPGVAGKRCDRCAHGFYAYQDGSCTPCDCPHTQNTCDPE--TGECVCPPHTQGVKCEEC 1028
Query: 1006 TD-----PSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHC 1060
D + G C S G TG+ + C + S F C
Sbjct: 1029 EDGHWGYDAEVGCQAC-NCSLVGSTHHRCDVVTGHCQCKSKFGGRACDQCSLGYRDFPDC 1087
Query: 1061 PACQCN-------------GHSKCINQSICEKCENLTTGKHCETCISGFYG-DPTNGGKC 1106
C C+ G C+ ++ C+ G C C G + N C
Sbjct: 1088 VPCDCDLRGTSGDACNLEQGLCGCVEETGACPCKENVFGPQCNECREGTFALRADNPLGC 1147
Query: 1107 QPCKCNGHASLCN 1119
PC C+G + LC+
Sbjct: 1148 SPCFCSGLSHLCS 1160
Score = 48.1 bits (113), Expect = 6e-05
Identities = 50/197 (25%), Positives = 74/197 (37%), Gaps = 46/197 (23%)
Query: 971 GQCMEWYTMSTCPPENCSG--YCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMP 1028
G C+ + S+CP + + C C H C + N +C G ++ P + P
Sbjct: 268 GMCICYGHASSCPWDETTKKLQCQCEH-------NTCGESCN----RCCPGYHQQPWR-P 315
Query: 1029 SQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCP-----ACQCNGHSKCINQSICEKCENL 1083
+GN N +D Y+ S A Q G CIN C
Sbjct: 316 GTVSSGNTCEA--CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCIN------CLQN 367
Query: 1084 TTGKHCETCISGFYG----DPTNGGKCQPCKCNGHASLCNT--------------NTGKC 1125
T G +CETCI G+Y P C+PC C+ SL + G+C
Sbjct: 368 TMGINCETCIDGYYRPHKVSPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQC 427
Query: 1126 FCTTKGVKGDECQLCEV 1142
C +G G++C C++
Sbjct: 428 PC-KEGYTGEKCDRCQL 443
Score = 37.0 bits (84), Expect = 0.14
Identities = 34/133 (25%), Positives = 47/133 (35%), Gaps = 18/133 (13%)
Query: 998 EQPGCGWCT-DPSNTGKGKCIEGSYKGPV---KMPSQAPTGNFYPQPLLNSSMCLEDSRY 1053
E C C DP + CI+ + K P Q P Y C
Sbjct: 390 EDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCKEGY-----TGEKCDRCQLG 444
Query: 1054 NWSFIHCPACQCN-----GHSKCINQSICEKCENLTTGKHCETCISGFYG-DPTNGGKCQ 1107
+ C +C CN C +C+ EN+ GK C+ C GFY N C
Sbjct: 445 YKDYPTCVSCGCNPVGSASDEPCTGPCVCK--ENVE-GKACDRCKPGFYNLKEKNPRGCS 501
Query: 1108 PCKCNGHASLCNT 1120
C C G + +C++
Sbjct: 502 ECFCFGVSDVCSS 514
Score = 34.7 bits (78), Expect = 0.68
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 101 CDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHC 132
CD P C+P TG+CVCP G +C+ C
Sbjct: 998 CDCPHTQN-TCDPETGECVCPPHTQGVKCEEC 1028
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 77.4 bits (189), Expect = 9e-14
Identities = 56/208 (26%), Positives = 82/208 (39%), Gaps = 57/208 (27%)
Query: 982 CPPENCSGYCT--------CSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVK------- 1026
C P C G+ C +C + G +C KC+ G Y P K
Sbjct: 754 CEPCQCFGHAESCDDVTGECLNCKDHTGGPYCD--------KCLPGFYGEPTKGTSEDCQ 805
Query: 1027 ---MPSQAPTGNFYPQPLLNSSMCL-----------------EDSRYNWSFI---HCPAC 1063
P P+ NF P L+ S+ L + + + C C
Sbjct: 806 PCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPC 865
Query: 1064 QCNGH------SKCINQS-ICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS 1116
QCN + C + S C C+ TTG++CE C G++GD + CQPC+CN S
Sbjct: 866 QCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAVDAKNCQPCRCNAGGS 925
Query: 1117 ---LCNTNTGKCFCTTKGVKGDECQLCE 1141
+C++ TG+C C V+G C C+
Sbjct: 926 FSEVCHSQTGQCECRA-NVQGQRCDKCK 952
Score = 61.6 bits (148), Expect = 5e-09
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 39/176 (22%)
Query: 978 TMSTCPPENCSGYCT--------CSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPS 1029
T+ TC P C+G+ + C +C +C +C G Y +P+
Sbjct: 1413 TLGTCVPCQCNGHSSLCDPETSICQNCQHHTAGDFCE--------RCALGYYGIVKGLPN 1464
Query: 1030 QAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHC 1089
PL++SS N+S P+C G ++ C C G++C
Sbjct: 1465 DCQQ---CACPLISSSN-------NFS----PSCVAEG----LDDYRCTACPRGYEGQYC 1506
Query: 1090 ETCISGFYGDPTN-GGKCQPCKCNGHASL---CNTNTGKCFCTTKGVKGDECQLCE 1141
E C G+ G P N GG CQ C+C+ + SL C+ TG C C G G +C C+
Sbjct: 1507 ERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTC-RPGATGRKCDGCK 1561
Score = 58.9 bits (141), Expect = 3e-08
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 1060 CPACQCNGHSKCINQ--SICEKCENLTTGKHCETCISGFYGDPTN-GGKCQPCKC----- 1111
C CQCNGHS + SIC+ C++ T G CE C G+YG CQ C C
Sbjct: 1417 CVPCQCNGHSSLCDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLISS 1476
Query: 1112 -NGHASLC---NTNTGKCFCTTKGVKGDECQLCEVENRYQGNP 1150
N + C + +C +G +G C+ C Y G+P
Sbjct: 1477 SNNFSPSCVAEGLDDYRCTACPRGYEGQYCERC--APGYTGSP 1517
Score = 55.5 bits (132), Expect = 4e-07
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 1076 ICEKCENLT--TGKHCETCISGFY------GDPTNG---GKCQPCKCNGHASLCNTNTGK 1124
+ EKC+ +G CE C+ GFY G T G G C PC+CNGH+SLC+ T
Sbjct: 1376 LIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQCNGHSSLCDPETSI 1435
Query: 1125 CFCTTKGVKGDECQLC 1140
C GD C+ C
Sbjct: 1436 CQNCQHHTAGDFCERC 1451
Score = 52.0 bits (123), Expect = 4e-06
Identities = 67/281 (23%), Positives = 95/281 (33%), Gaps = 47/281 (16%)
Query: 918 CERPANHSAKQCRTPCA----LRTACG----DCTSGSSECMWCSNMKQCVDSNAYVASFP 969
CE AN ++C A L++A G +C S S+ C QC V
Sbjct: 937 CECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPG-VTGKK 995
Query: 970 FGQCMEWYTMSTCPPENCSGYCTCSHCLEQ--PGCGWCTDPSNTGKGKCIEG-------- 1019
+C Y C+ C CSH P G C P NT KC +
Sbjct: 996 CDRCAHGYF--NFQEGGCTA-CECSHLGNNCDPKTGRCICPPNTIGEKCSKCAPNTWGHS 1052
Query: 1020 ----------SYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQC---- 1065
S G + TG P + + C E SR +W++ C C C
Sbjct: 1053 ITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPRCNLCDCFLPG 1112
Query: 1066 ---------NGHSKCINQSICEKCENLTTGKHCETCISGFYG-DPTNGGKCQPCKCNGHA 1115
C +Q+ C+ G HC+ C G +G D N C C C G
Sbjct: 1113 TDATTCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYCFGTT 1172
Query: 1116 SLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLRGTCY 1156
+ C+ G T +K ++ L V+ Q +G +
Sbjct: 1173 TQCSEAKG-LIRTWVTLKAEQTILPLVDEALQHTTTKGIVF 1212
Score = 47.8 bits (112), Expect = 8e-05
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 31/108 (28%)
Query: 1063 CQCNGHSKCI------NQSICEKCENLTTGKHCETCISGFYGDPTNGG------KCQPCK 1110
C C GH++ N+S CE CE+ T G C+ C GF+ P G +C+ C
Sbjct: 287 CICYGHARACPLDPATNKSRCE-CEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACN 345
Query: 1111 CNGHASLCNTNT------------------GKCFCTTKGVKGDECQLC 1140
C+G A C + G C T+ G C+ C
Sbjct: 346 CHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETC 393
Score = 47.4 bits (111), Expect = 1e-04
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 1076 ICEKCENLTTGKHCETCISGF--YGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVK 1133
+C+ C TG CE+C GG C+PC+C GHA C+ TG+C
Sbjct: 723 VCQ-CPPGYTGSSCESCWPRHRRVNGTIFGGICEPCQCFGHAESCDDVTGECLNCKDHTG 781
Query: 1134 GDECQLCEVENRYQGNPLRGT 1154
G C C + G P +GT
Sbjct: 782 GPYCDKC--LPGFYGEPTKGT 800
Score = 47.0 bits (110), Expect = 1e-04
Identities = 37/127 (29%), Positives = 43/127 (33%), Gaps = 39/127 (30%)
Query: 1060 CPACQCNGHS--------------------KCINQSICEKCENLTTGKHCETCISGFYG- 1098
C AC C+G + K I +C C T G +CETC GF+
Sbjct: 341 CEACNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRP 400
Query: 1099 ---DPTNGGKCQPCKCNGHASL---C---------NTNTGKCFCTTKGVKGDECQLCEVE 1143
P CQPC C+ SL C G C C T G G C C
Sbjct: 401 KGVSPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKT-GFGGVSCDRC--A 457
Query: 1144 NRYQGNP 1150
Y G P
Sbjct: 458 RGYTGYP 464
Score = 40.4 bits (93), Expect = 0.012
Identities = 63/267 (23%), Positives = 88/267 (32%), Gaps = 74/267 (27%)
Query: 95 AAEAKECDRPCVNGGRCNPG----------TGQCVCPAGWVGEQCQHC-GGRFRLTGSSG 143
A +AK C +PC RCN G TGQC C A G++C C G F L + G
Sbjct: 909 AVDAKNC-QPC----RCNAGGSFSEVCHSQTGQCECRANVQGQRCDKCKAGTFGLQSARG 963
Query: 144 FVTDGPGNYKYKT-------KCTWLIEG-QPNRIMRLRFNHF------ATECSWDHLYVY 189
V ++ K+ +C W G + R +F T C HL
Sbjct: 964 CVPCNCNSFGSKSFDCEESGQC-WCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL--- 1019
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEV--VATSGYALLHFFSDAAYNLTGFNITYSF 247
GN P+ + S A N G +IT
Sbjct: 1020 ----------------------GNNCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGC 1057
Query: 248 DMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCT-DNCGFPHRGICN------ 300
C NCS G + +T +C C + G C C+ + +P +C+
Sbjct: 1058 KAC--NCSTVGSLDFQCNVNTGQCNCHPKFSGAKC--TECSRGHWNYPRCNLCDCFLPGT 1113
Query: 301 -----SSDVRGCSCFSDWQGPGCSVPV 322
S+ + CSC C V V
Sbjct: 1114 DATTCDSETKKCSCSDQTGQCTCKVNV 1140
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 77.4 bits (189), Expect = 9e-14
Identities = 56/208 (26%), Positives = 82/208 (39%), Gaps = 57/208 (27%)
Query: 982 CPPENCSGYCT--------CSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVK------- 1026
C P C G+ C +C + G +C KC+ G Y P K
Sbjct: 754 CEPCQCFGHAESCDDVTGECLNCKDHTGGPYCD--------KCLPGFYGEPTKGTSEDCQ 805
Query: 1027 ---MPSQAPTGNFYPQPLLNSSMCL-----------------EDSRYNWSFI---HCPAC 1063
P P+ NF P L+ S+ L + + + C C
Sbjct: 806 PCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPRCERCAEGYFGQPSVPGGSCQPC 865
Query: 1064 QCNGH------SKCINQS-ICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS 1116
QCN + C + S C C+ TTG++CE C G++GD + CQPC+CN S
Sbjct: 866 QCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAVDAKNCQPCRCNAGGS 925
Query: 1117 ---LCNTNTGKCFCTTKGVKGDECQLCE 1141
+C++ TG+C C V+G C C+
Sbjct: 926 FSEVCHSQTGQCECRA-NVQGQRCDKCK 952
Score = 61.6 bits (148), Expect = 5e-09
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 39/176 (22%)
Query: 978 TMSTCPPENCSGYCT--------CSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPS 1029
T+ TC P C+G+ + C +C +C +C G Y +P+
Sbjct: 1413 TLGTCVPCQCNGHSSLCDPETSICQNCQHHTAGDFCE--------RCALGYYGIVKGLPN 1464
Query: 1030 QAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHC 1089
PL++SS N+S P+C G ++ C C G++C
Sbjct: 1465 DCQQ---CACPLISSSN-------NFS----PSCVAEG----LDDYRCTACPRGYEGQYC 1506
Query: 1090 ETCISGFYGDPTN-GGKCQPCKCNGHASL---CNTNTGKCFCTTKGVKGDECQLCE 1141
E C G+ G P N GG CQ C+C+ + SL C+ TG C C G G +C C+
Sbjct: 1507 ERCAPGYTGSPGNPGGSCQECECDPYGSLPVPCDPVTGFCTC-RPGATGRKCDGCK 1561
Score = 58.9 bits (141), Expect = 3e-08
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
Query: 1060 CPACQCNGHSKCINQ--SICEKCENLTTGKHCETCISGFYGDPTN-GGKCQPCKC----- 1111
C CQCNGHS + SIC+ C++ T G CE C G+YG CQ C C
Sbjct: 1417 CVPCQCNGHSSLCDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLISS 1476
Query: 1112 -NGHASLC---NTNTGKCFCTTKGVKGDECQLCEVENRYQGNP 1150
N + C + +C +G +G C+ C Y G+P
Sbjct: 1477 SNNFSPSCVAEGLDDYRCTACPRGYEGQYCERC--APGYTGSP 1517
Score = 55.5 bits (132), Expect = 4e-07
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 1076 ICEKCENLT--TGKHCETCISGFY------GDPTNG---GKCQPCKCNGHASLCNTNTGK 1124
+ EKC+ +G CE C+ GFY G T G G C PC+CNGH+SLC+ T
Sbjct: 1376 LIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVPCQCNGHSSLCDPETSI 1435
Query: 1125 CFCTTKGVKGDECQLC 1140
C GD C+ C
Sbjct: 1436 CQNCQHHTAGDFCERC 1451
Score = 52.0 bits (123), Expect = 4e-06
Identities = 67/281 (23%), Positives = 95/281 (33%), Gaps = 47/281 (16%)
Query: 918 CERPANHSAKQCRTPCA----LRTACG----DCTSGSSECMWCSNMKQCVDSNAYVASFP 969
CE AN ++C A L++A G +C S S+ C QC V
Sbjct: 937 CECRANVQGQRCDKCKAGTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQPG-VTGKK 995
Query: 970 FGQCMEWYTMSTCPPENCSGYCTCSHCLEQ--PGCGWCTDPSNTGKGKCIEG-------- 1019
+C Y C+ C CSH P G C P NT KC +
Sbjct: 996 CDRCAHGYF--NFQEGGCTA-CECSHLGNNCDPKTGRCICPPNTIGEKCSKCAPNTWGHS 1052
Query: 1020 ----------SYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQC---- 1065
S G + TG P + + C E SR +W++ C C C
Sbjct: 1053 ITTGCKACNCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPRCNLCDCFLPG 1112
Query: 1066 ---------NGHSKCINQSICEKCENLTTGKHCETCISGFYG-DPTNGGKCQPCKCNGHA 1115
C +Q+ C+ G HC+ C G +G D N C C C G
Sbjct: 1113 TDATTCDSETKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCYCFGTT 1172
Query: 1116 SLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLRGTCY 1156
+ C+ G T +K ++ L V+ Q +G +
Sbjct: 1173 TQCSEAKG-LIRTWVTLKAEQTILPLVDEALQHTTTKGIVF 1212
Score = 47.8 bits (112), Expect = 8e-05
Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 31/108 (28%)
Query: 1063 CQCNGHSKCI------NQSICEKCENLTTGKHCETCISGFYGDPTNGG------KCQPCK 1110
C C GH++ N+S CE CE+ T G C+ C GF+ P G +C+ C
Sbjct: 287 CICYGHARACPLDPATNKSRCE-CEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEACN 345
Query: 1111 CNGHASLCNTNT------------------GKCFCTTKGVKGDECQLC 1140
C+G A C + G C T+ G C+ C
Sbjct: 346 CHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETC 393
Score = 47.4 bits (111), Expect = 1e-04
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 1076 ICEKCENLTTGKHCETCISGF--YGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVK 1133
+C+ C TG CE+C GG C+PC+C GHA C+ TG+C
Sbjct: 723 VCQ-CPPGYTGSSCESCWPRHRRVNGTIFGGICEPCQCFGHAESCDDVTGECLNCKDHTG 781
Query: 1134 GDECQLCEVENRYQGNPLRGT 1154
G C C + G P +GT
Sbjct: 782 GPYCDKC--LPGFYGEPTKGT 800
Score = 47.0 bits (110), Expect = 1e-04
Identities = 37/127 (29%), Positives = 43/127 (33%), Gaps = 39/127 (30%)
Query: 1060 CPACQCNGHS--------------------KCINQSICEKCENLTTGKHCETCISGFYG- 1098
C AC C+G + K I +C C T G +CETC GF+
Sbjct: 341 CEACNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFFRP 400
Query: 1099 ---DPTNGGKCQPCKCNGHASL---C---------NTNTGKCFCTTKGVKGDECQLCEVE 1143
P CQPC C+ SL C G C C T G G C C
Sbjct: 401 KGVSPNYPRPCQPCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKT-GFGGVSCDRC--A 457
Query: 1144 NRYQGNP 1150
Y G P
Sbjct: 458 RGYTGYP 464
Score = 40.4 bits (93), Expect = 0.012
Identities = 63/267 (23%), Positives = 88/267 (32%), Gaps = 74/267 (27%)
Query: 95 AAEAKECDRPCVNGGRCNPG----------TGQCVCPAGWVGEQCQHC-GGRFRLTGSSG 143
A +AK C +PC RCN G TGQC C A G++C C G F L + G
Sbjct: 909 AVDAKNC-QPC----RCNAGGSFSEVCHSQTGQCECRANVQGQRCDKCKAGTFGLQSARG 963
Query: 144 FVTDGPGNYKYKT-------KCTWLIEG-QPNRIMRLRFNHF------ATECSWDHLYVY 189
V ++ K+ +C W G + R +F T C HL
Sbjct: 964 CVPCNCNSFGSKSFDCEESGQC-WCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHL--- 1019
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEV--VATSGYALLHFFSDAAYNLTGFNITYSF 247
GN P+ + S A N G +IT
Sbjct: 1020 ----------------------GNNCDPKTGRCICPPNTIGEKCSKCAPNTWGHSITTGC 1057
Query: 248 DMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCT-DNCGFPHRGICN------ 300
C NCS G + +T +C C + G C C+ + +P +C+
Sbjct: 1058 KAC--NCSTVGSLDFQCNVNTGQCNCHPKFSGAKC--TECSRGHWNYPRCNLCDCFLPGT 1113
Query: 301 -----SSDVRGCSCFSDWQGPGCSVPV 322
S+ + CSC C V V
Sbjct: 1114 DATTCDSETKKCSCSDQTGQCTCKVNV 1140
>gi|5453579 bone morphogenetic protein 1 isoform 3 precursor [Homo
sapiens]
Length = 986
Score = 75.1 bits (183), Expect = 5e-13
Identities = 48/156 (30%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 101 CDRPCVNGGRCNPGTGQCVCPAGWV----GEQCQHCGGRFRLTGSSGFVT--DGPGNYKY 154
C + CVN G+ +C C +G+V C+ G ++T +SG +T + P Y
Sbjct: 714 CQQDCVN----TFGSYECQCRSGFVLHDNKHDCKEAGCDHKVTSTSGTITSPNWPDKYPS 769
Query: 155 KTKCTWLIEGQPNRIMRLRFNHF----ATECSWDHLYVYDGDSIYAPLVAAFSGLIVPER 210
K +CTW I P ++L F EC++DHL V+DG AP++ F G PE
Sbjct: 770 KKECTWAISSTPGHRVKLTFMEMDIESQPECAYDHLEVFDGRDAKAPVLGRFCGSKKPE- 828
Query: 211 DGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYS 246
V+AT L F+SD + GF +++
Sbjct: 829 -------PVLATGSRMFLRFYSDNSVQRKGFQASHA 857
Score = 53.9 bits (128), Expect = 1e-06
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 15/167 (8%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLY 187
CGG + + P +Y+ C W I+ + L F F E C++D+L
Sbjct: 435 CGGDVKKDYGHIQSPNYPDDYRPSKVCIWRIQVSEGFHVGLTFQSFEIERHDSCAYDYLE 494
Query: 188 VYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY-- 245
V DG S + L+ + G P+ ++ +TS L F SD + N GF + +
Sbjct: 495 VRDGHSESSTLIGRYCGYEKPD--------DIKSTSSRLWLKFVSDGSINKAGFAVNFFK 546
Query: 246 SFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCG 292
D C G E + N+ + +C C ++ A D C CG
Sbjct: 547 EVDECSRPNRGGCEQRCLNTLGSYKCSCDPGYE-LAPDKRRCEAACG 592
Score = 46.6 bits (109), Expect = 2e-04
Identities = 55/198 (27%), Positives = 78/198 (39%), Gaps = 36/198 (18%)
Query: 97 EAKECDRPCVNGGRCNP------GTGQCVCPAGWV----GEQCQHCGGRFRLTGSSGFVT 146
E EC RP N G C G+ +C C G+ +C+ G F LT +G +T
Sbjct: 547 EVDECSRP--NRGGCEQRCLNTLGSYKCSCDPGYELAPDKRRCEAACGGF-LTKLNGSIT 603
Query: 147 DG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLYVYDGDSIYAPLVA 200
P Y C W + + L+F+ F TE C +D + V G + + L
Sbjct: 604 SPGWPKEYPPNKNCIWQLVAPTQYRISLQFDFFETEGNDVCKYDFVEVRSGLTADSKLHG 663
Query: 201 AFSGLIVPERDGNETVPEVVATSGY--ALLHFFSDAAYNLTGFNITYSFDMCPNNCS-GR 257
F G PE V TS Y + F SD + GF + D + CS
Sbjct: 664 KFCGSEKPE----------VITSQYNNMRVEFKSDNTVSKKGFKAHFFSD--KDECSKDN 711
Query: 258 GECK--ISNSSDTVECEC 273
G C+ N+ + EC+C
Sbjct: 712 GGCQQDCVNTFGSYECQC 729
Score = 46.2 bits (108), Expect = 2e-04
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 16/132 (12%)
Query: 123 GWVGEQCQHCGGRFRLTGSS----GFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFA 178
G+ CGG+ R + G NY C W+I + + L F F
Sbjct: 851 GFQASHATECGGQVRADVKTKDLYSHAQFGDNNYPGGVDCEWVIVAEEGYGVELVFQTFE 910
Query: 179 ----TECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDA 234
T+C +D++ ++DG AP + + G PE EV + L+ F SD
Sbjct: 911 VEEETDCGYDYMELFDGYDSTAPRLGRYCGSGPPE--------EVYSAGDSVLVKFHSDD 962
Query: 235 AYNLTGFNITYS 246
GF++ Y+
Sbjct: 963 TITKKGFHLRYT 974
Score = 35.0 bits (79), Expect = 0.52
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 128 QCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHF----ATECSW 183
+C CG + + + + P Y C W I P + L F + C +
Sbjct: 318 KCPACGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVTPGEKIILNFTSLDLYRSRLCWY 377
Query: 184 DHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNI 243
D++ V DG APL F G +PE +V+T + F S + + GF
Sbjct: 378 DYVEVRDGFWRKAPLRGRFCGSKLPE--------PIVSTDSRLWVEFRSSSNWVGKGFFA 429
Query: 244 TY 245
Y
Sbjct: 430 VY 431
>gi|119703755 laminin, beta 2 precursor [Homo sapiens]
Length = 1798
Score = 74.3 bits (181), Expect = 8e-13
Identities = 66/247 (26%), Positives = 97/247 (39%), Gaps = 32/247 (12%)
Query: 914 NGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQC 973
+ + ER A QC G S +S C+ + + + Y + P QC
Sbjct: 734 DAAALERQATFERYQCHEE-------GLVPSKTSPSEACAPLLISLSTLIYNGALPC-QC 785
Query: 974 MEWYTMST-CPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKG----KCIEGSYKGPVKMP 1028
++S+ C P G C C + C C P G G + + S++G +
Sbjct: 786 NPQGSLSSECNPHG--GQCLCKPGVVGRRCDLCA-PGYYGFGPTGCQACQCSHEGALSSL 842
Query: 1029 SQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQ--SICEKCENLTTG 1086
+ +G + C R W F C C CNGH+ N C C + T G
Sbjct: 843 CEKTSGQCLCRTGAFGLRCDRCQRGQWGFPSCRPCVCNGHADECNTHTGACLGCRDHTGG 902
Query: 1087 KHCETCISGFYGDP--TNGGKCQPCKC-------NGHASLCNTNTGK----CFCTTKGVK 1133
+HCE CI+GF+GDP GG+C+PC C A+ C+ + C C G
Sbjct: 903 EHCERCIAGFHGDPRLPYGGQCRPCPCPEGPGSQRHFATSCHQDEYSQQIVCHCRA-GYT 961
Query: 1134 GDECQLC 1140
G C+ C
Sbjct: 962 GLRCEAC 968
Score = 60.8 bits (146), Expect = 9e-09
Identities = 68/246 (27%), Positives = 95/246 (38%), Gaps = 44/246 (17%)
Query: 921 PANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMS 980
P A QC AL + C + TSG C + +C FP
Sbjct: 825 PTGCQACQCSHEGALSSLC-EKTSGQCLCRTGAFGLRCDRCQRGQWGFP----------- 872
Query: 981 TCPPENCSGYCTCSHCLEQPG-CGWCTDPSNTGKG---KCIEGSYKGPVKMPSQAPTGNF 1036
+C P C+G+ C G C C D +TG +CI G + G ++P G
Sbjct: 873 SCRPCVCNGHA--DECNTHTGACLGCRD--HTGGEHCERCIAG-FHGDPRLPYG---GQC 924
Query: 1037 YPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHCETCISGF 1096
P P C E F A C H +Q I C TG CE C G
Sbjct: 925 RPCP------CPEGPGSQRHF----ATSC--HQDEYSQQIVCHCRAGYTGLRCEACAPGH 972
Query: 1097 YGDPTN-GGKCQPCKCNGH-----ASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNP 1150
+GDP+ GG+CQ C+C+G+ C+ +TG+C +G C C + + G
Sbjct: 973 FGDPSRPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHC--KPGFHGQA 1030
Query: 1151 LRGTCY 1156
R +C+
Sbjct: 1031 ARQSCH 1036
Score = 53.1 bits (126), Expect = 2e-06
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 30/110 (27%)
Query: 1060 CPACQCNGHSKC-------------INQSICEKCENLTTGKHCETCISGFYGDPT----N 1102
C C+C+GH+ ++ +C+ C++ T G+HCE C FY DPT +
Sbjct: 344 CRKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPTKDLRD 403
Query: 1103 GGKCQPCKCNGHAS----LCNTN--------TGKCFCTTKGVKGDECQLC 1140
C+ C C+ S C+++ +G+C C + V G CQ C
Sbjct: 404 PAVCRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRC-KEHVVGTRCQQC 452
Score = 44.3 bits (103), Expect = 9e-04
Identities = 62/270 (22%), Positives = 92/270 (34%), Gaps = 71/270 (26%)
Query: 929 CRTPCALRTACGDCTSGSSECMWC------SNMKQCVDSNAYVASFPFG-QCM------- 974
CR PC +C + + C+ C + ++C+ P+G QC
Sbjct: 874 CR-PCVCNGHADECNTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCPEG 932
Query: 975 ---EWYTMSTCPPENCSGYCTCSHC------LEQPGC--GWCTDPSNTGKGKCIEGSYKG 1023
+ + ++C + S C HC L C G DPS G G+C G
Sbjct: 933 PGSQRHFATSCHQDEYSQQIVC-HCRAGYTGLRCEACAPGHFGDPSRPG-GRCQLCECSG 990
Query: 1024 PVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCE-N 1082
+ P P ++ CL ++ HC C+ H + QS C +C N
Sbjct: 991 NID-----PMDPDACDP--HTGQCLR-CLHHTEGPHCAHCKPGFHGQAARQS-CHRCTCN 1041
Query: 1083 L----------------------------TTGKHCETCISGFYGDPTNGGKCQPCKCN-- 1112
L G C+ C F+ + T+G CQPC C+
Sbjct: 1042 LLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFW-NLTSGHGCQPCACHPS 1100
Query: 1113 -GHASLCNTNTGKCFCTTKGVKGDECQLCE 1141
CN TG+C C G G C C+
Sbjct: 1101 RARGPTCNEFTGQCHCRA-GFGGRTCSECQ 1129
Score = 42.4 bits (98), Expect = 0.003
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 1079 KCENLTTGKHCETCISGFYG-DPTNGGKCQPCKCNGHASL-----CNTNTGKCFCTTKGV 1132
+C+ G C+ C GF+G ++ C+ C+CN ++ C+ N+G C+C + V
Sbjct: 439 RCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARGTVPGSTPCDPNSGSCYC-KRLV 497
Query: 1133 KGDECQLC 1140
G C C
Sbjct: 498 TGRGCDRC 505
Score = 37.7 bits (86), Expect = 0.080
Identities = 38/149 (25%), Positives = 53/149 (35%), Gaps = 29/149 (19%)
Query: 982 CP-PENC-----SGYCTCSHCLEQPGCGWCTD---PSNTGKG----KCIEGSYKGPVKMP 1028
CP P+ C SG C C ++ P C C +G G C +GP
Sbjct: 1050 CPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHPSRARGPT--- 1106
Query: 1029 SQAPTGNFYPQPLLNSSMCLEDSRYNWS--FIHCPACQCNGHSKCINQSICEK------C 1080
TG + + C E +W + C AC C+ S+ I+ C + C
Sbjct: 1107 CNEFTGQCHCRAGFGGRTCSECQELHWGDPGLQCHACDCD--SRGIDTPQCHRFTGHCSC 1164
Query: 1081 ENLTTGKHCETCISGFYGDPTNGGKCQPC 1109
+G C+ C GF G C PC
Sbjct: 1165 RPGVSGVRCDQCARGFSG---IFPACHPC 1190
Score = 35.0 bits (79), Expect = 0.52
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 100 ECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHCGGRFRLTGSSG 143
+C+ CNP GQC+C G VG +C C + G +G
Sbjct: 784 QCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTG 827
Score = 33.9 bits (76), Expect = 1.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 101 CDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHC 132
C G CN TGQC C AG+ G C C
Sbjct: 1097 CHPSRARGPTCNEFTGQCHCRAGFGGRTCSEC 1128
Score = 31.2 bits (69), Expect = 7.5
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 92 GSAAAEAKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHC 132
G +A +C C +GQC+C G G +C C
Sbjct: 824 GPTGCQACQCSHEGALSSLCEKTSGQCLCRTGAFGLRCDRC 864
Score = 30.8 bits (68), Expect = 9.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 98 AKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHCGGRF 136
A +CD ++ +C+ TG C C G G +C C F
Sbjct: 1142 ACDCDSRGIDTPQCHRFTGHCSCRPGVSGVRCDQCARGF 1180
>gi|38045910 laminin alpha 3 subunit isoform 1 [Homo sapiens]
Length = 3333
Score = 73.2 bits (178), Expect = 2e-12
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 1060 CPACQCNGHS-KCINQS-ICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKC---NGH 1114
C C CNGHS +C + S IC C++ T G+HCE C G+YG+ + G C+ C C N
Sbjct: 1684 CVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVH-GSCRACPCPHTNSF 1742
Query: 1115 ASLCNTNTGKCFCTTK-GVKGDECQLCEVENRYQGNPLR--GTC 1155
A+ C N G C+ K G G +C+ C Y GNP + G+C
Sbjct: 1743 ATGCVVNGGDVRCSCKAGYTGTQCERC--APGYFGNPQKFGGSC 1784
Score = 61.6 bits (148), Expect = 5e-09
Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 982 CPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKG--KCIEGSYKGPVKMPS-------QAP 1032
C P +G HC + G C P+ G+ +C G Y P P +
Sbjct: 1268 CHPTGATG----PHCSPEGGQCPC-QPNVIGRQCTRCATGHYGFPRCKPCSCGRRLCEEM 1322
Query: 1033 TGNFYPQPLLNSSMCLEDSRYNWSF---IHCPACQCNGHS-------KCINQSICEKCEN 1082
TG P C +++SF C C C+ +C S +C+
Sbjct: 1323 TGQCRCPPRTVRPQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKP 1382
Query: 1083 LTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS---LCNTNTGKCFCTTKGVKGDECQL 1139
TG+ C+ C SGFY P +C PC CN + +C+ TG C C + V+G EC +
Sbjct: 1383 RITGRQCDRCASGFYRFP----ECVPCNCNRDGTEPGVCDPGTGACLC-KENVEGTECNV 1437
Query: 1140 C 1140
C
Sbjct: 1438 C 1438
Score = 60.1 bits (144), Expect = 2e-08
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 1080 CENLTTGKHCETCISGFYGDPTN--GGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDEC 1137
C G C+ C G+Y D G+C PC CNGH++ C +G C G+ C
Sbjct: 1656 CPPAYAGDSCQGCSPGYYRDHKGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAGEHC 1715
Query: 1138 QLCEVENRYQGNPLRGTC 1155
+ C + Y GN + G+C
Sbjct: 1716 ERC--QEGYYGNAVHGSC 1731
Score = 59.7 bits (143), Expect = 2e-08
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1035 NFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICE------KCENLTTGKH 1088
+FY P S C +R +F H A C H C C+ G+
Sbjct: 1236 SFYLDPQTASRFCKNSARSLVAFYHKGALPCECHPTGATGPHCSPEGGQCPCQPNVIGRQ 1295
Query: 1089 CETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQG 1148
C C +G YG P +C+PC C LC TG+C C + V+ +C++CE + +
Sbjct: 1296 CTRCATGHYGFP----RCKPCSCG--RRLCEEMTGQCRCPPRTVR-PQCEVCETHS-FSF 1347
Query: 1149 NPLRG 1153
+P+ G
Sbjct: 1348 HPMAG 1352
Score = 58.2 bits (139), Expect = 6e-08
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 43/172 (25%)
Query: 982 CPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKG----KCIEGSYKGPVKMPSQAPTGNFY 1037
C P NC+G+ + C Q G G C + + G +C EG Y V +A
Sbjct: 1684 CVPCNCNGHS--NQC--QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRA-----C 1734
Query: 1038 PQPLLNSSMCLEDSRYNWSFIHCPACQCNGHS-KCINQSICEKCENLTTGKHCETCISGF 1096
P P NS C NG +C C+ TG CE C G+
Sbjct: 1735 PCPHTNS--------------FATGCVVNGGDVRC-------SCKAGYTGTQCERCAPGY 1773
Query: 1097 YGDPTN-GGKCQPCKCNGHASL--CNTNTGKCF-----CTTKGVKGDECQLC 1140
+G+P GG CQPC CN + L C+ TG C ++ + D+C C
Sbjct: 1774 FGNPQKFGGSCQPCSCNSNGQLGSCHPLTGDCINQEPKDSSPAEECDDCDSC 1825
Score = 57.8 bits (138), Expect = 7e-08
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 27/114 (23%)
Query: 1055 WSFIH-CPACQCNGH-SKCINQ-------------------SICEKCENLTTGKHCETCI 1093
W H C AC C+GH S C +C C++ T G +CE C
Sbjct: 347 WEQSHECEACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCA 406
Query: 1094 SGF---YGDPTNG-GKCQPCKCN-GHASLCNTNTGKCFCTTKGVKGDECQLCEV 1142
G+ YG P + C PC C+ HA C +G+C C GD C+ C +
Sbjct: 407 KGYYRPYGVPVDAPDGCIPCSCDPEHADGCEQGSGRCHC-KPNFHGDNCEKCAI 459
Score = 50.8 bits (120), Expect = 9e-06
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Query: 1065 CNGHSKCINQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASL---CNTN 1121
C+ H +C+ C G C+TC SGFY P CQ C C+ S C++
Sbjct: 503 CDAHGRCL-------CRPGVEGPRCDTCRSGFYSFPI----CQACWCSALGSYQMPCSSV 551
Query: 1122 TGKCFCTTKGVKGDECQLC 1140
TG+C C GV G C C
Sbjct: 552 TGQCEC-RPGVTGQRCDRC 569
Score = 45.1 bits (105), Expect = 5e-04
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 1055 WSFIHCPACQCN--GHSKCINQSICEKCENL--TTGKHCETCISGFYGDPTNGGKCQPCK 1110
+SF C AC C+ G + S+ +CE TG+ C+ C+SG Y P G C
Sbjct: 528 YSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSAC- 586
Query: 1111 CNGHASLCNTNTGKCFCTTKGVKGDECQLCEV 1142
A N+N G C C V+G C C++
Sbjct: 587 --DPAGTINSNLGYCQCKLH-VEGPTCSRCKL 615
Score = 42.7 bits (99), Expect = 0.002
Identities = 59/266 (22%), Positives = 94/266 (35%), Gaps = 69/266 (25%)
Query: 896 LSEPSTRGLKAATCINPLNG-SVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSN 954
L P G + TC + +C+ + + PC+ T +C G +
Sbjct: 510 LCRPGVEGPRCDTCRSGFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTG----QR 565
Query: 955 MKQCVDSNAYVASFPFGQCMEWYTMSTCPPENCS----GYCTCSHCLEQPGCGWCTDPSN 1010
+C+ S AY FP Q + S C P GYC C +E P C C
Sbjct: 566 CDRCL-SGAY--DFPHCQG----SSSACDPAGTINSNLGYCQCKLHVEGPTCSRC----- 613
Query: 1011 TGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSK 1070
K + + + + P+G C C+C+
Sbjct: 614 ----KLLYWN------LDKENPSG-------------------------CSECKCHKAGT 638
Query: 1071 CINQSICEK------CENLTTGKHCETCISGFYG-DPTNGGKCQPCKCN---GHASLCNT 1120
C + C++ G C+TC G++ + +N CQ C+C+ +S+C+
Sbjct: 639 VSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSG 698
Query: 1121 NTGKCFCTTKGVKGDECQLCEVENRY 1146
+G C C + V G CQ EN Y
Sbjct: 699 PSGVCQC-REHVVGKVCQ--RPENNY 721
Score = 41.6 bits (96), Expect = 0.006
Identities = 65/303 (21%), Positives = 96/303 (31%), Gaps = 95/303 (31%)
Query: 909 CINPLNGSVCERPANHSAKQCRTPCALRTA---CGDCTSGSSECMWCSNMKQCVDSNAYV 965
C+ + VC N+ K R C T C C +G ++ W
Sbjct: 299 CVCNGHAEVCN--INNPEKLFRCECQHHTCGETCDRCCTGYNQRRW-------------- 342
Query: 966 ASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQP----------------GCGWCTDPS 1009
+ W C NC G+ S+C P G G C +
Sbjct: 343 ------RPAAWEQSHECEACNCHGHA--SNCYYDPDVERQQASLNTQGIYAGGGVCINCQ 394
Query: 1010 NTGKG----KCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQC 1065
+ G +C +G Y+ P +P AP G C D H C+
Sbjct: 395 HNTAGVNCEQCAKGYYR-PYGVPVDAPDGCI---------PCSCDPE------HADGCE- 437
Query: 1066 NGHSKCINQSICEKCENLTTGKHCETCISGFYGDP-----------------TNGGKCQP 1108
G +C C+ G +CE C G+Y P G +
Sbjct: 438 QGSGRC-------HCKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGDIKG 490
Query: 1109 CKCNGHA---SLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLRGTCYYTLLIDYQF 1165
C CN +C+ + G+C C GV+G C C + + P+ C+ + L YQ
Sbjct: 491 CDCNLEGVLPEICDAH-GRCLC-RPGVEGPRCDTC--RSGFYSFPICQACWCSALGSYQM 546
Query: 1166 TFS 1168
S
Sbjct: 547 PCS 549
Score = 40.4 bits (93), Expect = 0.012
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 245 YSFDMCPNN-CSGRGECKISNSSDTVECECSENWKGEAC--------DIPHCTDNCGFPH 295
YSF +C CS G ++ SS T +CEC G+ C D PHC +
Sbjct: 528 YSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSACD 587
Query: 296 RGICNSSDVRGCSCFSDWQGPGCS 319
+S++ C C +GP CS
Sbjct: 588 PAGTINSNLGYCQCKLHVEGPTCS 611
Score = 40.4 bits (93), Expect = 0.012
Identities = 50/220 (22%), Positives = 70/220 (31%), Gaps = 46/220 (20%)
Query: 915 GSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCM 974
G C N +QC T C G C CS ++ + GQC
Sbjct: 1282 GGQCPCQPNVIGRQC-------TRCATGHYGFPRCKPCSCGRRLCEEMT-------GQCR 1327
Query: 975 EWYTMSTCPPENCSGYCTC--SHCLE---QPGCGWCTDPSNTGKGKCIEGSYKGPVKMPS 1029
CPP C +H GC C N + IE + MP
Sbjct: 1328 -------CPPRTVRPQCEVCETHSFSFHPMAGCEGC----NCSRRGTIEAA------MPE 1370
Query: 1030 -QAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEK------CEN 1082
+G +P + C + + F C C CN +C+ C+
Sbjct: 1371 CDRDSGQCRCKPRITGRQCDRCASGFYRFPECVPCNCNRDGT--EPGVCDPGTGACLCKE 1428
Query: 1083 LTTGKHCETCISG-FYGDPTNGGKCQPCKCNGHASLCNTN 1121
G C C G F+ DP N C C C G + C+++
Sbjct: 1429 NVEGTECNVCREGSFHLDPANLKGCTSCFCFGVNNQCHSS 1468
Score = 37.0 bits (84), Expect = 0.14
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 101 CDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHC-GGRFRLTGSSGFVTDGPGNYKYKTKC 158
C+R G C+PGTG C+C G +C C G F L P N K T C
Sbjct: 1407 CNRDGTEPGVCDPGTGACLCKENVEGTECNVCREGSFHL---------DPANLKGCTSC 1456
Score = 35.8 bits (81), Expect = 0.30
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 100 ECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGF 144
EC G C+P GQC C +G QC C TG GF
Sbjct: 1267 ECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCA-----TGHYGF 1306
Score = 32.0 bits (71), Expect = 4.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 103 RPCVNGGR-CNPGTGQCVCPAGWVGEQCQHC 132
+PC G R C TGQC CP V QC+ C
Sbjct: 1310 KPCSCGRRLCEEMTGQCRCPPRTVRPQCEVC 1340
Score = 31.6 bits (70), Expect = 5.7
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 254 CSGRGE-CKISNSSDTVECECSENWKGEACD 283
C+G E C I+N CEC + GE CD
Sbjct: 301 CNGHAEVCNINNPEKLFRCECQHHTCGETCD 331
Score = 30.8 bits (68), Expect = 9.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
Query: 89 AVSGSAAAEAKECDRPCVN----GGRCNPGTGQCVCPAGWVGEQCQHC 132
AV GS A C P N G N G +C C AG+ G QC+ C
Sbjct: 1726 AVHGSCRA----CPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERC 1769
>gi|189217428 laminin alpha 3 subunit isoform 4 [Homo sapiens]
Length = 1668
Score = 73.2 bits (178), Expect = 2e-12
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 1060 CPACQCNGHS-KCINQS-ICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKC---NGH 1114
C C CNGHS +C + S IC C++ T G+HCE C G+YG+ + G C+ C C N
Sbjct: 75 CVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVH-GSCRACPCPHTNSF 133
Query: 1115 ASLCNTNTGKCFCTTK-GVKGDECQLCEVENRYQGNPLR--GTC 1155
A+ C N G C+ K G G +C+ C Y GNP + G+C
Sbjct: 134 ATGCVVNGGDVRCSCKAGYTGTQCERC--APGYFGNPQKFGGSC 175
Score = 58.2 bits (139), Expect = 6e-08
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 43/172 (25%)
Query: 982 CPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKG----KCIEGSYKGPVKMPSQAPTGNFY 1037
C P NC+G+ + C Q G G C + + G +C EG Y V +A
Sbjct: 75 CVPCNCNGHS--NQC--QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRA-----C 125
Query: 1038 PQPLLNSSMCLEDSRYNWSFIHCPACQCNGHS-KCINQSICEKCENLTTGKHCETCISGF 1096
P P NS C NG +C C+ TG CE C G+
Sbjct: 126 PCPHTNS--------------FATGCVVNGGDVRC-------SCKAGYTGTQCERCAPGY 164
Query: 1097 YGDPTN-GGKCQPCKCNGHASL--CNTNTGKCF-----CTTKGVKGDECQLC 1140
+G+P GG CQPC CN + L C+ TG C ++ + D+C C
Sbjct: 165 FGNPQKFGGSCQPCSCNSNGQLGSCHPLTGDCINQEPKDSSPAEECDDCDSC 216
Score = 53.9 bits (128), Expect = 1e-06
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 1092 CISGFYGDPTN--GGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGN 1149
C G+Y D G+C PC CNGH++ C +G C G+ C+ C + Y GN
Sbjct: 59 CSPGYYRDHKGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERC--QEGYYGN 116
Query: 1150 PLRGTC 1155
+ G+C
Sbjct: 117 AVHGSC 122
Score = 30.8 bits (68), Expect = 9.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
Query: 89 AVSGSAAAEAKECDRPCVN----GGRCNPGTGQCVCPAGWVGEQCQHC 132
AV GS A C P N G N G +C C AG+ G QC+ C
Sbjct: 117 AVHGSCRA----CPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERC 160
>gi|189217425 laminin alpha 3 subunit isoform 3 [Homo sapiens]
Length = 3277
Score = 73.2 bits (178), Expect = 2e-12
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 1060 CPACQCNGHS-KCINQS-ICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKC---NGH 1114
C C CNGHS +C + S IC C++ T G+HCE C G+YG+ + G C+ C C N
Sbjct: 1684 CVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVH-GSCRACPCPHTNSF 1742
Query: 1115 ASLCNTNTGKCFCTTK-GVKGDECQLCEVENRYQGNPLR--GTC 1155
A+ C N G C+ K G G +C+ C Y GNP + G+C
Sbjct: 1743 ATGCVVNGGDVRCSCKAGYTGTQCERC--APGYFGNPQKFGGSC 1784
Score = 61.6 bits (148), Expect = 5e-09
Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 32/181 (17%)
Query: 982 CPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKG--KCIEGSYKGPVKMPS-------QAP 1032
C P +G HC + G C P+ G+ +C G Y P P +
Sbjct: 1268 CHPTGATG----PHCSPEGGQCPC-QPNVIGRQCTRCATGHYGFPRCKPCSCGRRLCEEM 1322
Query: 1033 TGNFYPQPLLNSSMCLEDSRYNWSF---IHCPACQCNGHS-------KCINQSICEKCEN 1082
TG P C +++SF C C C+ +C S +C+
Sbjct: 1323 TGQCRCPPRTVRPQCEVCETHSFSFHPMAGCEGCNCSRRGTIEAAMPECDRDSGQCRCKP 1382
Query: 1083 LTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS---LCNTNTGKCFCTTKGVKGDECQL 1139
TG+ C+ C SGFY P +C PC CN + +C+ TG C C + V+G EC +
Sbjct: 1383 RITGRQCDRCASGFYRFP----ECVPCNCNRDGTEPGVCDPGTGACLC-KENVEGTECNV 1437
Query: 1140 C 1140
C
Sbjct: 1438 C 1438
Score = 60.1 bits (144), Expect = 2e-08
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 1080 CENLTTGKHCETCISGFYGDPTN--GGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDEC 1137
C G C+ C G+Y D G+C PC CNGH++ C +G C G+ C
Sbjct: 1656 CPPAYAGDSCQGCSPGYYRDHKGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAGEHC 1715
Query: 1138 QLCEVENRYQGNPLRGTC 1155
+ C + Y GN + G+C
Sbjct: 1716 ERC--QEGYYGNAVHGSC 1731
Score = 59.7 bits (143), Expect = 2e-08
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 14/125 (11%)
Query: 1035 NFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICE------KCENLTTGKH 1088
+FY P S C +R +F H A C H C C+ G+
Sbjct: 1236 SFYLDPQTASRFCKNSARSLVAFYHKGALPCECHPTGATGPHCSPEGGQCPCQPNVIGRQ 1295
Query: 1089 CETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQG 1148
C C +G YG P +C+PC C LC TG+C C + V+ +C++CE + +
Sbjct: 1296 CTRCATGHYGFP----RCKPCSCG--RRLCEEMTGQCRCPPRTVR-PQCEVCETHS-FSF 1347
Query: 1149 NPLRG 1153
+P+ G
Sbjct: 1348 HPMAG 1352
Score = 58.2 bits (139), Expect = 6e-08
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 43/172 (25%)
Query: 982 CPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKG----KCIEGSYKGPVKMPSQAPTGNFY 1037
C P NC+G+ + C Q G G C + + G +C EG Y V +A
Sbjct: 1684 CVPCNCNGHS--NQC--QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRA-----C 1734
Query: 1038 PQPLLNSSMCLEDSRYNWSFIHCPACQCNGHS-KCINQSICEKCENLTTGKHCETCISGF 1096
P P NS C NG +C C+ TG CE C G+
Sbjct: 1735 PCPHTNS--------------FATGCVVNGGDVRC-------SCKAGYTGTQCERCAPGY 1773
Query: 1097 YGDPTN-GGKCQPCKCNGHASL--CNTNTGKCF-----CTTKGVKGDECQLC 1140
+G+P GG CQPC CN + L C+ TG C ++ + D+C C
Sbjct: 1774 FGNPQKFGGSCQPCSCNSNGQLGSCHPLTGDCINQEPKDSSPAEECDDCDSC 1825
Score = 57.8 bits (138), Expect = 7e-08
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 27/114 (23%)
Query: 1055 WSFIH-CPACQCNGH-SKCINQ-------------------SICEKCENLTTGKHCETCI 1093
W H C AC C+GH S C +C C++ T G +CE C
Sbjct: 347 WEQSHECEACNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCA 406
Query: 1094 SGF---YGDPTNG-GKCQPCKCN-GHASLCNTNTGKCFCTTKGVKGDECQLCEV 1142
G+ YG P + C PC C+ HA C +G+C C GD C+ C +
Sbjct: 407 KGYYRPYGVPVDAPDGCIPCSCDPEHADGCEQGSGRCHC-KPNFHGDNCEKCAI 459
Score = 50.8 bits (120), Expect = 9e-06
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Query: 1065 CNGHSKCINQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASL---CNTN 1121
C+ H +C+ C G C+TC SGFY P CQ C C+ S C++
Sbjct: 503 CDAHGRCL-------CRPGVEGPRCDTCRSGFYSFPI----CQACWCSALGSYQMPCSSV 551
Query: 1122 TGKCFCTTKGVKGDECQLC 1140
TG+C C GV G C C
Sbjct: 552 TGQCEC-RPGVTGQRCDRC 569
Score = 45.1 bits (105), Expect = 5e-04
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 1055 WSFIHCPACQCN--GHSKCINQSICEKCENL--TTGKHCETCISGFYGDPTNGGKCQPCK 1110
+SF C AC C+ G + S+ +CE TG+ C+ C+SG Y P G C
Sbjct: 528 YSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSAC- 586
Query: 1111 CNGHASLCNTNTGKCFCTTKGVKGDECQLCEV 1142
A N+N G C C V+G C C++
Sbjct: 587 --DPAGTINSNLGYCQCKLH-VEGPTCSRCKL 615
Score = 42.7 bits (99), Expect = 0.002
Identities = 59/266 (22%), Positives = 94/266 (35%), Gaps = 69/266 (25%)
Query: 896 LSEPSTRGLKAATCINPLNG-SVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSN 954
L P G + TC + +C+ + + PC+ T +C G +
Sbjct: 510 LCRPGVEGPRCDTCRSGFYSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTG----QR 565
Query: 955 MKQCVDSNAYVASFPFGQCMEWYTMSTCPPENCS----GYCTCSHCLEQPGCGWCTDPSN 1010
+C+ S AY FP Q + S C P GYC C +E P C C
Sbjct: 566 CDRCL-SGAY--DFPHCQG----SSSACDPAGTINSNLGYCQCKLHVEGPTCSRC----- 613
Query: 1011 TGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSK 1070
K + + + + P+G C C+C+
Sbjct: 614 ----KLLYWN------LDKENPSG-------------------------CSECKCHKAGT 638
Query: 1071 CINQSICEK------CENLTTGKHCETCISGFYG-DPTNGGKCQPCKCN---GHASLCNT 1120
C + C++ G C+TC G++ + +N CQ C+C+ +S+C+
Sbjct: 639 VSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGGALSSMCSG 698
Query: 1121 NTGKCFCTTKGVKGDECQLCEVENRY 1146
+G C C + V G CQ EN Y
Sbjct: 699 PSGVCQC-REHVVGKVCQ--RPENNY 721
Score = 41.6 bits (96), Expect = 0.006
Identities = 65/303 (21%), Positives = 96/303 (31%), Gaps = 95/303 (31%)
Query: 909 CINPLNGSVCERPANHSAKQCRTPCALRTA---CGDCTSGSSECMWCSNMKQCVDSNAYV 965
C+ + VC N+ K R C T C C +G ++ W
Sbjct: 299 CVCNGHAEVCN--INNPEKLFRCECQHHTCGETCDRCCTGYNQRRW-------------- 342
Query: 966 ASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQP----------------GCGWCTDPS 1009
+ W C NC G+ S+C P G G C +
Sbjct: 343 ------RPAAWEQSHECEACNCHGHA--SNCYYDPDVERQQASLNTQGIYAGGGVCINCQ 394
Query: 1010 NTGKG----KCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQC 1065
+ G +C +G Y+ P +P AP G C D H C+
Sbjct: 395 HNTAGVNCEQCAKGYYR-PYGVPVDAPDGCI---------PCSCDPE------HADGCE- 437
Query: 1066 NGHSKCINQSICEKCENLTTGKHCETCISGFYGDP-----------------TNGGKCQP 1108
G +C C+ G +CE C G+Y P G +
Sbjct: 438 QGSGRC-------HCKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSEDPVAGDIKG 490
Query: 1109 CKCNGHA---SLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLRGTCYYTLLIDYQF 1165
C CN +C+ + G+C C GV+G C C + + P+ C+ + L YQ
Sbjct: 491 CDCNLEGVLPEICDAH-GRCLC-RPGVEGPRCDTC--RSGFYSFPICQACWCSALGSYQM 546
Query: 1166 TFS 1168
S
Sbjct: 547 PCS 549
Score = 40.4 bits (93), Expect = 0.012
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 245 YSFDMCPNN-CSGRGECKISNSSDTVECECSENWKGEAC--------DIPHCTDNCGFPH 295
YSF +C CS G ++ SS T +CEC G+ C D PHC +
Sbjct: 528 YSFPICQACWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQGSSSACD 587
Query: 296 RGICNSSDVRGCSCFSDWQGPGCS 319
+S++ C C +GP CS
Sbjct: 588 PAGTINSNLGYCQCKLHVEGPTCS 611
Score = 40.4 bits (93), Expect = 0.012
Identities = 50/220 (22%), Positives = 70/220 (31%), Gaps = 46/220 (20%)
Query: 915 GSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCM 974
G C N +QC T C G C CS ++ + GQC
Sbjct: 1282 GGQCPCQPNVIGRQC-------TRCATGHYGFPRCKPCSCGRRLCEEMT-------GQCR 1327
Query: 975 EWYTMSTCPPENCSGYCTC--SHCLE---QPGCGWCTDPSNTGKGKCIEGSYKGPVKMPS 1029
CPP C +H GC C N + IE + MP
Sbjct: 1328 -------CPPRTVRPQCEVCETHSFSFHPMAGCEGC----NCSRRGTIEAA------MPE 1370
Query: 1030 -QAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEK------CEN 1082
+G +P + C + + F C C CN +C+ C+
Sbjct: 1371 CDRDSGQCRCKPRITGRQCDRCASGFYRFPECVPCNCNRDGT--EPGVCDPGTGACLCKE 1428
Query: 1083 LTTGKHCETCISG-FYGDPTNGGKCQPCKCNGHASLCNTN 1121
G C C G F+ DP N C C C G + C+++
Sbjct: 1429 NVEGTECNVCREGSFHLDPANLKGCTSCFCFGVNNQCHSS 1468
Score = 37.0 bits (84), Expect = 0.14
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 101 CDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHC-GGRFRLTGSSGFVTDGPGNYKYKTKC 158
C+R G C+PGTG C+C G +C C G F L P N K T C
Sbjct: 1407 CNRDGTEPGVCDPGTGACLCKENVEGTECNVCREGSFHL---------DPANLKGCTSC 1456
Score = 35.8 bits (81), Expect = 0.30
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 100 ECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGF 144
EC G C+P GQC C +G QC C TG GF
Sbjct: 1267 ECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCA-----TGHYGF 1306
Score = 32.0 bits (71), Expect = 4.4
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 103 RPCVNGGR-CNPGTGQCVCPAGWVGEQCQHC 132
+PC G R C TGQC CP V QC+ C
Sbjct: 1310 KPCSCGRRLCEEMTGQCRCPPRTVRPQCEVC 1340
Score = 31.6 bits (70), Expect = 5.7
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 254 CSGRGE-CKISNSSDTVECECSENWKGEACD 283
C+G E C I+N CEC + GE CD
Sbjct: 301 CNGHAEVCNINNPEKLFRCECQHHTCGETCD 331
Score = 30.8 bits (68), Expect = 9.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
Query: 89 AVSGSAAAEAKECDRPCVN----GGRCNPGTGQCVCPAGWVGEQCQHC 132
AV GS A C P N G N G +C C AG+ G QC+ C
Sbjct: 1726 AVHGSCRA----CPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERC 1769
>gi|38045908 laminin alpha 3 subunit isoform 2 [Homo sapiens]
Length = 1724
Score = 73.2 bits (178), Expect = 2e-12
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 1060 CPACQCNGHS-KCINQS-ICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKC---NGH 1114
C C CNGHS +C + S IC C++ T G+HCE C G+YG+ + G C+ C C N
Sbjct: 75 CVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVH-GSCRACPCPHTNSF 133
Query: 1115 ASLCNTNTGKCFCTTK-GVKGDECQLCEVENRYQGNPLR--GTC 1155
A+ C N G C+ K G G +C+ C Y GNP + G+C
Sbjct: 134 ATGCVVNGGDVRCSCKAGYTGTQCERC--APGYFGNPQKFGGSC 175
Score = 58.2 bits (139), Expect = 6e-08
Identities = 50/172 (29%), Positives = 68/172 (39%), Gaps = 43/172 (25%)
Query: 982 CPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKG----KCIEGSYKGPVKMPSQAPTGNFY 1037
C P NC+G+ + C Q G G C + + G +C EG Y V +A
Sbjct: 75 CVPCNCNGHS--NQC--QDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRA-----C 125
Query: 1038 PQPLLNSSMCLEDSRYNWSFIHCPACQCNGHS-KCINQSICEKCENLTTGKHCETCISGF 1096
P P NS C NG +C C+ TG CE C G+
Sbjct: 126 PCPHTNS--------------FATGCVVNGGDVRC-------SCKAGYTGTQCERCAPGY 164
Query: 1097 YGDPTN-GGKCQPCKCNGHASL--CNTNTGKCF-----CTTKGVKGDECQLC 1140
+G+P GG CQPC CN + L C+ TG C ++ + D+C C
Sbjct: 165 FGNPQKFGGSCQPCSCNSNGQLGSCHPLTGDCINQEPKDSSPAEECDDCDSC 216
Score = 53.9 bits (128), Expect = 1e-06
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 1092 CISGFYGDPTN--GGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGN 1149
C G+Y D G+C PC CNGH++ C +G C G+ C+ C + Y GN
Sbjct: 59 CSPGYYRDHKGLYTGRCVPCNCNGHSNQCQDGSGICVNCQHNTAGEHCERC--QEGYYGN 116
Query: 1150 PLRGTC 1155
+ G+C
Sbjct: 117 AVHGSC 122
Score = 30.8 bits (68), Expect = 9.8
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 8/48 (16%)
Query: 89 AVSGSAAAEAKECDRPCVN----GGRCNPGTGQCVCPAGWVGEQCQHC 132
AV GS A C P N G N G +C C AG+ G QC+ C
Sbjct: 117 AVHGSCRA----CPCPHTNSFATGCVVNGGDVRCSCKAGYTGTQCERC 160
>gi|145309326 laminin, gamma 1 precursor [Homo sapiens]
Length = 1609
Score = 72.4 bits (176), Expect = 3e-12
Identities = 40/98 (40%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 1060 CPACQCNGHSK-CINQSICEKCENLTTGKHCETCISGFYGDPTNG--GKCQPCKCNGHAS 1116
C C CNGHS+ C ++ C + T G HCE C G+YGD T G CQPC C G +S
Sbjct: 721 CVLCACNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSS 780
Query: 1117 LCNT-NTGKCFCTT--KGVKGDECQLCEVENRYQGNPL 1151
T + CT G G C+LC ++ Y G+PL
Sbjct: 781 CAVVPKTKEVVCTNCPTGTTGKRCELC--DDGYFGDPL 816
Score = 61.6 bits (148), Expect = 5e-09
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 1060 CPACQCNGHSKCI-----NQSICEKCENLTTGKHCETCISGFYGDP--TNG--GKCQPCK 1110
C C C G S C + +C C TTGK CE C G++GDP NG C+ C+
Sbjct: 770 CQPCPCPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQ 829
Query: 1111 CNGH-----ASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPL 1151
C+ + CN TG+C G C C ++ + GNPL
Sbjct: 830 CSDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRC--KDGFFGNPL 873
Score = 59.3 bits (142), Expect = 3e-08
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 27/163 (16%)
Query: 991 CTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLED 1050
C CS ++ G C N G+C++ Y + G F+ PL +
Sbjct: 828 CQCSDNIDPNAVGNC----NRLTGECLKCIYNTAGFYCDRCKDG-FFGNPLAPNPAD--- 879
Query: 1051 SRYNWSFIHCPACQCNGHSKCINQSICE----KCENL--TTGKHCETCISGFYGDPTNGG 1104
C AC CN + QS C +CE L TG+ C C GFY + +G
Sbjct: 880 --------KCKACNCNLYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFY-NLQSGQ 930
Query: 1105 KCQPCKCNGHASL---CNTNTGKCFCTTKGVKGDECQLCEVEN 1144
C+ C C+ S C+ TG+C C G+ G C+ CEV +
Sbjct: 931 GCERCDCHALGSTNGQCDIRTGQCEC-QPGITGQHCERCEVNH 972
Score = 58.2 bits (139), Expect = 6e-08
Identities = 55/193 (28%), Positives = 70/193 (36%), Gaps = 36/193 (18%)
Query: 981 TCPPENCSGYCTCSHCLEQPGCGWCTD----PSNTGKGK------CIEGSYKGPVKMPSQ 1030
TC PE +G C C P C C+D S G C GS V +
Sbjct: 732 TCDPE--TGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTKE 789
Query: 1031 APTGNFYPQPLLNSSMCLEDSRY-------NWSFIHCPACQC------NGHSKCINQS-I 1076
N P L D Y N C CQC N C +
Sbjct: 790 VVCTNC-PTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCSDNIDPNAVGNCNRLTGE 848
Query: 1077 CEKCENLTTGKHCETCISGFYGD---PTNGGKCQPCKCNGHASL-----CNTNTGKCFCT 1128
C KC T G +C+ C GF+G+ P KC+ C CN + ++ CN TG+C C
Sbjct: 849 CLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNLYGTMKQQSSCNPVTGQCECL 908
Query: 1129 TKGVKGDECQLCE 1141
V G +C C+
Sbjct: 909 PH-VTGQDCGACD 920
Score = 51.6 bits (122), Expect = 5e-06
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 1086 GKHCETCISGFYGDPTNGGKCQP---CKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEV 1142
G+ CE C+SG+ + N G P C CNGH+ C+ TG C C G C+ C
Sbjct: 698 GQFCEMCLSGYRRETPNLGPYSPCVLCACNGHSETCDPETGVCNC-RDNTAGPHCEKC-- 754
Query: 1143 ENRYQGNPLRGT 1154
+ Y G+ GT
Sbjct: 755 SDGYYGDSTAGT 766
Score = 50.8 bits (120), Expect = 9e-06
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 1060 CPACQCNGHSK-CI----------NQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQP 1108
C C CNG S+ C + C C++ T G HCE C F+ N C
Sbjct: 339 CLPCDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFF-RLGNNEACSS 397
Query: 1109 CKCNGHASLCN--TNTGKCFCTTKGVKGDECQLCE 1141
C C+ SL + G+C C GV GD+C C+
Sbjct: 398 CHCSPVGSLSTQCDSYGRCSC-KPGVMGDKCDRCQ 431
Score = 50.4 bits (119), Expect = 1e-05
Identities = 55/244 (22%), Positives = 83/244 (34%), Gaps = 77/244 (31%)
Query: 900 STRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCV 959
+T G+ C+ N R SA +C PC DC S EC +
Sbjct: 310 NTYGVDCEKCLPFFNDRPWRRATAESASEC-LPC-------DCNGRSQECYF-------- 353
Query: 960 DSNAYVASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEG 1019
D Y ++ G C NC +HC +C E
Sbjct: 354 DPELYRSTGHGGHCT-----------NCQDNTDGAHC-----------------ERCREN 385
Query: 1020 SYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEK 1079
++ L N+ C S + S + + QC+ + +C
Sbjct: 386 FFR------------------LGNNEAC---SSCHCSPVGSLSTQCDSYGRC-------S 417
Query: 1080 CENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASL--CNTNTGKCFCTTKGVKGDEC 1137
C+ G C+ C GF+ G C+PC C+ S+ CN TG+C C V+G C
Sbjct: 418 CKPGVMGDKCDRCQPGFHSLTEAG--CRPCSCDPSGSIDECNIETGRCVC-KDNVEGFNC 474
Query: 1138 QLCE 1141
+ C+
Sbjct: 475 ERCK 478
Score = 49.7 bits (117), Expect = 2e-05
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 1060 CPACQCNG----HSKC-INQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCN-- 1112
C C C+ + +C I CE C+ TG+HCE C +G G C+PC C+
Sbjct: 932 CERCDCHALGSTNGQCDIRTGQCE-CQPGITGQHCERCEVNHFGFGPEG--CKPCDCHPE 988
Query: 1113 GHASLCNTNTGKCFCTTKGVKGDECQLCE 1141
G SL + G+C C +G G+ C CE
Sbjct: 989 GSLSLQCKDDGRCEC-REGFVGNRCDQCE 1016
Score = 46.2 bits (108), Expect = 2e-04
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 24/116 (20%)
Query: 1063 CQCNGH-SKCINQS----ICEKCENLTTGKHCETCISGFYGDP------TNGGKCQPCKC 1111
C+CNGH S+C+ +C C++ T G CE C+ F P + +C PC C
Sbjct: 286 CKCNGHASECMKNEFDKLVCN-CKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDC 344
Query: 1112 NGHASLC---------NTNTGKCFCTTKGVKGDECQLCEVEN--RYQGNPLRGTCY 1156
NG + C + G C G C+ C EN R N +C+
Sbjct: 345 NGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCR-ENFFRLGNNEACSSCH 399
Score = 33.5 bits (75), Expect = 1.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 97 EAKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHC 132
E +C G+C+ TGQC C G G+ C+ C
Sbjct: 933 ERCDCHALGSTNGQCDIRTGQCECQPGITGQHCERC 968
>gi|143770880 laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 72.0 bits (175), Expect = 4e-12
Identities = 77/267 (28%), Positives = 105/267 (39%), Gaps = 51/267 (19%)
Query: 915 GSVCERPANHSAKQCRTPCALRTACGDCTSGSSE-----CMWCSNMKQCVDSNAYVASFP 969
GS C R QC+ P + C C++GS + C C Q S V
Sbjct: 778 GSSCSRLGGQC--QCK-PLVVGRCCDRCSTGSYDLGHHGCHPCHCHPQ--GSKDTVCDQV 832
Query: 970 FGQCMEWYTMSTCPPENC-SGY--------CTCSHCLE--QPGCGWCTDPSN--TGKG-- 1014
GQC +S + C +GY C C+ E P G C + TG+
Sbjct: 833 TGQCPCHGEVSGRRCDRCLAGYFGFPSCHPCPCNRFAELCDPETGSCFNCGGFTTGRNCE 892
Query: 1015 KCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQ 1074
+CI+G Y P P +C +D N F H +C N S +
Sbjct: 893 RCIDGYYGNPSSGQPCRPC------------LCPDDPSSNQYFAH--SCYQNLWSSDV-- 936
Query: 1075 SICEKCENLTTGKHCETCISGFYGDPT-NGGKCQPCKCNGHASL-----CNTNTGKCFCT 1128
IC C TG C C +GFYG+P +G CQPC CN + + C+ TG+C
Sbjct: 937 -ICN-CLQGYTGTQCGECSTGFYGNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLRC 994
Query: 1129 TKGVKGDECQLCEVENRYQGNPLRGTC 1155
+G CQLC + + G+ L TC
Sbjct: 995 LHNTQGANCQLC--KPGHYGSALNQTC 1019
Score = 65.1 bits (157), Expect = 5e-10
Identities = 59/232 (25%), Positives = 87/232 (37%), Gaps = 45/232 (19%)
Query: 937 TACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMSTCPPENCS---GYCT- 992
T CG+C++G N ++ P C + PE+CS G C
Sbjct: 947 TQCGECSTGFY-------------GNPRISGAPCQPCACNNNIDVTDPESCSRVTGECLR 993
Query: 993 CSHCLEQPGCGWCTDPSNTGKG---KCIEGSYKGPVKMPSQAPTGN--FYPQPLLNSSMC 1047
C H + C C P + G C S P + P G P+ + C
Sbjct: 994 CLHNTQGANCQLCK-PGHYGSALNQTCRRCSCHASGVSPMECPPGGGACLCDPVTGACPC 1052
Query: 1048 LED---------SRYNWSFIHCPACQ-CNGHSKCINQSICEK------CENLTTGKHCET 1091
L + + W+ + CQ C+ + S C++ C+ GK C
Sbjct: 1053 LPNVTGLACDRCADGYWNLVPGRGCQSCDCDPRTSQSSHCDQLTGQCPCKLGYGGKRCSE 1112
Query: 1092 CISGFYGDPTNGGKCQPCKCNGHAS---LCNTNTGKCFCTTKGVKGDECQLC 1140
C +YGDP G+C PC CN + +C+ +TG C C +GV G C C
Sbjct: 1113 CQENYYGDPP--GRCIPCDCNRAGTQKPICDPDTGMCRC-REGVSGQRCDRC 1161
Score = 59.3 bits (142), Expect = 3e-08
Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 65/188 (34%)
Query: 983 PPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLL 1042
PP G C C H + P C C D F+
Sbjct: 287 PPGMVHGQCVCQHNTDGPNCERCKD----------------------------FFQDAPW 318
Query: 1043 NSSMCLEDSRYNWSFIHCPACQCNGHS-KC------------INQSICEKCENLTTGKHC 1089
+ L+D+ C +C CN HS +C ++ +CE C++ T G+HC
Sbjct: 319 RPAADLQDNA-------CRSCSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHC 371
Query: 1090 ETCISGFYGDP----TNGGKCQPCKCNGHAS----LCNTNT--------GKCFCTTKGVK 1133
+ C FY DP ++ C PC+C+ + +C +++ G+C C + V+
Sbjct: 372 DRCRPLFYRDPLKTISDPYACIPCECDPDGTISGGICVSHSDPALGSVAGQCLC-KENVE 430
Query: 1134 GDECQLCE 1141
G +C C+
Sbjct: 431 GAKCDQCK 438
Score = 45.8 bits (107), Expect = 3e-04
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 1060 CPACQCNGHSKC------INQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCN- 1112
C C CN ++ C C + TG HCE C G++G + C PC C+
Sbjct: 452 CQPCDCNPLGSLPFLTCDVDTGQC-LCLSYVTGAHCEECTVGYWGLGNHLHGCSPCDCDI 510
Query: 1113 --GHASLCNTNTGKCFCTTKGVKGDEC 1137
++++C+ G+C C V G C
Sbjct: 511 GGAYSNVCSPKNGQCECRPH-VTGRSC 536
Score = 33.9 bits (76), Expect = 1.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 100 ECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHC 132
+CD C+ TGQC C G+ G++C C
Sbjct: 1081 DCDPRTSQSSHCDQLTGQCPCKLGYGGKRCSEC 1113
Score = 32.7 bits (73), Expect = 2.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 100 ECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHC 132
+C+R C+P TG C C G G++C C
Sbjct: 1129 DCNRAGTQKPICDPDTGMCRCREGVSGQRCDRC 1161
>gi|22547221 tolloid-like 1 [Homo sapiens]
Length = 1013
Score = 72.0 bits (175), Expect = 4e-12
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 27/167 (16%)
Query: 101 CDRPCVNGGRCNPGTGQCVCPAGWV----GEQCQHCGGRFRLTGSSGFVT--DGPGNYKY 154
C CVN G+ C C G+V C+ ++ SG +T + P Y
Sbjct: 741 CQHECVN----TMGSYMCQCRNGFVLHDNKHDCKEAECEQKIHSPSGLITSPNWPDKYPS 796
Query: 155 KTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLYVYDGDSIYAPLVAAFSGLIVPER 210
+ +CTW I P ++L F+ F E C++DHL V+DG++ +P++ G +P+
Sbjct: 797 RKECTWEISATPGHRIKLAFSEFEIEQHQECAYDHLEVFDGETEKSPILGRLCGNKIPD- 855
Query: 211 DGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGR 257
+VAT + F SDA+ GF T+S C GR
Sbjct: 856 -------PLVATGNKMFVRFVSDASVQRKGFQATHS-----TECGGR 890
Score = 58.5 bits (140), Expect = 4e-08
Identities = 46/167 (27%), Positives = 67/167 (40%), Gaps = 15/167 (8%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLY 187
CGG R + P +Y+ +C W I + + L F F E C++D+L
Sbjct: 462 CGGEIRKNEGQIQSPNYPDDYRPMKECVWKITVSESYHVGLTFQSFEIERHDNCAYDYLE 521
Query: 188 VYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGF--NITY 245
V DG S +PL+ F G PE ++ +TS + F SD N GF N
Sbjct: 522 VRDGTSENSPLIGRFCGYDKPE--------DIRSTSNTLWMKFVSDGTVNKAGFAANFFK 573
Query: 246 SFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCG 292
D C G E + N+ + +C C ++ D C CG
Sbjct: 574 EEDECAKPDRGGCEQRCLNTLGSYQCACEPGYE-LGPDRRSCEAACG 619
Score = 49.7 bits (117), Expect = 2e-05
Identities = 34/131 (25%), Positives = 51/131 (38%), Gaps = 16/131 (12%)
Query: 123 GWVGEQCQHCGGRFRLTGSS----GFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFA 178
G+ CGGR + G NY + C WL+ + + L F F
Sbjct: 878 GFQATHSTECGGRLKAESKPRDLYSHAQFGDNNYPGQVDCEWLLVSERGSRLELSFQTFE 937
Query: 179 TE----CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDA 234
E C +D++ ++DG A + F G PE E+ + L+HF +D
Sbjct: 938 VEEEADCGYDYVELFDGLDSTAVGLGRFCGSGPPE--------EIYSIGDSVLIHFHTDD 989
Query: 235 AYNLTGFNITY 245
N GF+I Y
Sbjct: 990 TINKKGFHIRY 1000
Score = 44.7 bits (104), Expect = 7e-04
Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 34/189 (17%)
Query: 101 CDRPCVNGGRCNPGTGQCVCPAGWV----GEQCQH-CGGRFRLTGSSGFVTDG--PGNYK 153
C++ C+N G+ QC C G+ C+ CGG LT +G +T P Y
Sbjct: 586 CEQRCLN----TLGSYQCACEPGYELGPDRRSCEAACGGL--LTKLNGTITTPGWPKEYP 639
Query: 154 YKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLYVYDGDSIYAPLVAAFSGLIVPE 209
C W + + ++F F E C +D++ ++ G S + L F G VPE
Sbjct: 640 PNKNCVWQVVAPTQYRISVKFEFFELEGNEVCKYDYVEIWSGLSSESKLHGKFCGAEVPE 699
Query: 210 RDGNETVPEVVATSGY--ALLHFFSDAAYNLTGFNITYSFDMCPNNCS-GRGEC--KISN 264
V TS + + F SD + GF + D + CS G C + N
Sbjct: 700 ----------VITSQFNNMRIEFKSDNTVSKKGFKAHFFSD--KDECSKDNGGCQHECVN 747
Query: 265 SSDTVECEC 273
+ + C+C
Sbjct: 748 TMGSYMCQC 756
Score = 36.6 bits (83), Expect = 0.18
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query: 120 CPAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFN---- 175
CPA GE Q G S GF P Y T C W + P + L F
Sbjct: 346 CPA--CGETLQESNGNL---SSPGF----PNGYPSYTHCIWRVSVTPGEKIVLNFTTMDL 396
Query: 176 HFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPE 209
+ ++ C +D++ V DG +PL+ F G +PE
Sbjct: 397 YKSSLCWYDYIEVRDGYWRKSPLLGRFCGDKLPE 430
>gi|6912724 tolloid-like 2 [Homo sapiens]
Length = 1015
Score = 70.9 bits (172), Expect = 9e-12
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 29/195 (14%)
Query: 101 CDRPCVNGGRCNPGTGQCVCPAG-WV---GEQCQHCGGRFRLTGSSGFVT--DGPGNYKY 154
C CVN G+ C C G W+ G C+ G +++ G + + P Y
Sbjct: 743 CQHECVN----TFGSYLCRCRNGYWLHENGHDCKEAGCAHKISSVEGTLASPNWPDKYPS 798
Query: 155 KTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLYVYDGDSIYAPLVAAFSGLIVPER 210
+ +CTW I ++L FN F E C++DHL +YDG AP++ F G P+
Sbjct: 799 RRECTWNISSTAGHRVKLTFNEFEIEQHQECAYDHLEMYDGPDSLAPILGRFCGSKKPD- 857
Query: 211 DGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGECKISNSSDTVE 270
VA+ L F+SDA+ GF +S C GR + ++
Sbjct: 858 -------PTVASGSSMFLRFYSDASVQRKGFQAVHS-----TECGGRLKAEVQTKELYSH 905
Query: 271 CECSE-NWKGEA-CD 283
+ + N+ EA CD
Sbjct: 906 AQFGDNNYPSEARCD 920
Score = 51.6 bits (122), Expect = 5e-06
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLY 187
CGG + P +Y+ +C W I + L F F E C++D+L
Sbjct: 464 CGGDMNKDAGQIQSPNYPDDYRPSKECVWRITVSEGFHVGLTFQAFEIERHDSCAYDYLE 523
Query: 188 VYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGF--NITY 245
V DG + + L+ F G PE +V ++S + F SD + N GF N
Sbjct: 524 VRDGPTEESALIGHFCGYEKPE--------DVKSSSNRLWMKFVSDGSINKAGFAANFFK 575
Query: 246 SFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCG 292
D C G E + N+ + +C C ++ A D C CG
Sbjct: 576 EVDECSWPDHGGCEHRCVNTLGSYKCACDPGYE-LAADKKMCEVACG 621
Score = 47.0 bits (110), Expect = 1e-04
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 16/132 (12%)
Query: 123 GWVGEQCQHCGGRFRLTGSS----GFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFA 178
G+ CGGR + + G NY + +C W+I + + L F F
Sbjct: 880 GFQAVHSTECGGRLKAEVQTKELYSHAQFGDNNYPSEARCDWVIVAEDGYGVELTFRTFE 939
Query: 179 TE----CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDA 234
E C +D++ YDG AP + F G+ + E+ + ++ F +D
Sbjct: 940 VEEEADCGYDYMEAYDGYDSSAPRLGRFC--------GSGPLEEIYSAGDSLMIRFRTDD 991
Query: 235 AYNLTGFNITYS 246
N GF+ Y+
Sbjct: 992 TINKKGFHARYT 1003
Score = 36.6 bits (83), Expect = 0.18
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Query: 120 CPAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHF-- 177
CPA GE Q G F G P Y + C W I P + L F
Sbjct: 348 CPA--CGETLQDTTGNFSAPGF-------PNGYPSYSHCVWRISVTPGEKIVLNFTSMDL 398
Query: 178 --ATECSWDHLYVYDGDSIYAPLVAAFSGLIVPE 209
+ C +D++ V DG APL+ F G +PE
Sbjct: 399 FKSRLCWYDYVEVRDGYWRKAPLLGRFCGDKIPE 432
>gi|92110053 CUB and Sushi multiple domains 2 [Homo sapiens]
Length = 3487
Score = 70.5 bits (171), Expect = 1e-11
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG LT SG + PG YK C W+IE QP +++ F+ F TE ++D L V
Sbjct: 752 CGGH--LTSPSGTILSPGWPGFYKDALSCAWVIEAQPGYPIKITFDRFKTEVNYDTLEVR 809
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
DG + APL+ + G VP+ +++TS Y L F +D +++ GF + Y
Sbjct: 810 DGRTYSAPLIGVYHGTQVPQ--------FLISTSNYLYLLFSTDKSHSDIGFQLRY 857
Score = 67.4 bits (163), Expect = 9e-11
Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 131 HCGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYV 188
HC LT S+G + PG+Y C+WL+ +P+ + L +F +E +D +
Sbjct: 2354 HCPTNELLTDSTGVILSQSYPGSYPQFQTCSWLVRVEPDYNISLTVEYFLSEKQYDEFEI 2413
Query: 189 YDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYAL-LHFFSDAAYNLTGFNITYSF 247
+DG S +PL+ A S GN + P +V +S ++ L + SD AYN GF I YS
Sbjct: 2414 FDGPSGQSPLLKALS--------GNYSAPLIVTSSSNSVYLRWSSDHAYNRKGFKIRYSA 2465
Query: 248 DMC 250
C
Sbjct: 2466 PYC 2468
Score = 60.5 bits (145), Expect = 1e-08
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 113 PGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIM 170
P C+ P CGG LTG SG + P Y +C W + P+ ++
Sbjct: 1436 PSPPTCIAP----------CGGD--LTGPSGVILSPNYPEPYPPGKECDWKVTVSPDYVI 1483
Query: 171 RLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHF 230
L FN F E +D L++YDG +PL+ +F G +P R + ++S L F
Sbjct: 1484 ALVFNIFNLEPGYDFLHIYDGRDSLSPLIGSFYGSQLPGR--------IESSSNSLFLAF 1535
Query: 231 FSDAAYNLTGFNITYS 246
SDA+ + GF I Y+
Sbjct: 1536 RSDASVSNAGFVIDYT 1551
Score = 56.6 bits (135), Expect = 2e-07
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 136 FRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDS 193
F T SG V P +Y C WLI +P + L FN E +D L + DG +
Sbjct: 580 FNFTSPSGVVLSPNYPEDYGNHLHCVWLILARPESRIHLAFNDIDVEPQFDFLVIKDGAT 639
Query: 194 IYAPLVAAFSGLIVPERDGNETVPEVVATSGY-ALLHFFSDAAYNLTGFNITYS---FDM 249
AP++ FSG +P + +SG+ A L F +D + GFNIT++ +
Sbjct: 640 AEAPVLGTFSG---------NQLPSSITSSGHVARLEFQTDHSTGKRGFNITFTTFRHNE 690
Query: 250 CPN 252
CP+
Sbjct: 691 CPD 693
Score = 56.2 bits (134), Expect = 2e-07
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 16/158 (10%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG + P Y C W I ++++ F TE +WD L V+DG
Sbjct: 1796 CGGNLTERRGTILSPGFPEPYLNSLNCVWKIVVPEGAGIQIQVVSFVTEQNWDSLEVFDG 1855
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY---SFD 248
++ +FSG VP + +TS LHF+SD + + GF++ Y
Sbjct: 1856 ADNTVTMLGSFSGTTVPAL--------LNSTSNQLYLHFYSDISVSAAGFHLEYKTVGLS 1907
Query: 249 MC-----PNNCSGRGECKISNSSDTVECECSENWKGEA 281
C P+N GE + N + +CE +G A
Sbjct: 1908 SCPEPAVPSNGVKTGERYLVNDVVSFQCEPGYALQGHA 1945
Score = 47.8 bits (112), Expect = 8e-05
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 132 CGGRFRLTGSSGFVTDG-PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYD 190
CGG R S ++ G P Y++ C W IE + + L F F TE D L ++D
Sbjct: 1271 CGGTVRGEVSGQVLSPGYPAPYEHNLNCIWTIEAEAGCTIGLHFLVFDTEEVHDVLRIWD 1330
Query: 191 GDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMC 250
G SG+++ E G ++ +T +L F +D + GF I +S
Sbjct: 1331 G--------PVESGVLLKELSGPALPKDLHSTFNSVVLQFSTDFFTSKQGFAIQFSVSTA 1382
Query: 251 --------PNNCSGRGECKISNSSDTVECECSENWKGEA 281
P N S G+ + S +C+ +G A
Sbjct: 1383 TSCNDPGIPQNGSRSGDSWEAGDSTVFQCDPGYALQGSA 1421
Score = 45.1 bits (105), Expect = 5e-04
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 130 QHCGGRFRLTGSSGFVTDGPG---NYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHL 186
Q+C F+L G +G V + PG Y CTW I + ++L F FA E +D L
Sbjct: 24 QNC--TFQLHGPNGTV-ESPGFPYGYPNYANCTWTITAEEQHRIQLVFQSFALEEDFDVL 80
Query: 187 YVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYS 246
V+DG L +G +P +V+ + L SD A + GF+ TY
Sbjct: 81 SVFDGPPQPENLRTRLTGFQLP--------ATIVSAATTLSLRLISDYAVSAQGFHATY- 131
Query: 247 FDMCPNNCSG 256
++ P++ G
Sbjct: 132 -EVLPSHTCG 140
Score = 44.7 bits (104), Expect = 7e-04
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 26/143 (18%)
Query: 111 CNPGTGQ--------CVCPAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLI 162
C PGT + C+ G E+ + + S GF PGNY C+W I
Sbjct: 1949 CMPGTVRRWNYPPPLCIAQCGGTVEEMEG------VILSPGF----PGNYPSNMDCSWKI 1998
Query: 163 EGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVAT 222
++F +F+TE + D++ + +G + ++ FSG +P +++T
Sbjct: 1999 ALPVGFGAHIQFLNFSTEPNHDYIEIRNGPYETSRMMGRFSGSELPS--------SLLST 2050
Query: 223 SGYALLHFFSDAAYNLTGFNITY 245
S ++F SD + N GF + Y
Sbjct: 2051 SHETTVYFHSDHSQNRPGFKLEY 2073
Score = 43.5 bits (101), Expect = 0.001
Identities = 49/178 (27%), Positives = 68/178 (38%), Gaps = 23/178 (12%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYV- 188
CGG R G SG ++ P Y CTW I + + L F F E +D L V
Sbjct: 202 CGGTLR--GQSGIISSPHFPSEYHNNADCTWTILAELGDTIALVFIDFQLEDGYDFLEVT 259
Query: 189 -YDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSF 247
+G S++ F+G +P V+++ + LHF SD + GF+ Y
Sbjct: 260 GTEGSSLW------FTGASLP--------APVISSKNWLRLHFTSDGNHRQRGFSAQYQV 305
Query: 248 DMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICNSSDVR 305
RG K+ S D + G + C D G P RG SD R
Sbjct: 306 KK-QIELKSRG-VKLMPSKDNSQKTSVLTQVGVSQGHNMCPDP-GIPERGKRLGSDFR 360
Score = 43.5 bits (101), Expect = 0.001
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG + GSSG + P Y CTW+IE + + F+ F E D+L +
Sbjct: 924 CGGFIQ--GSSGTILSPGFPDFYPNNLNCTWIIETSHGKGVFFTFHTFHLESGHDYLLIT 981
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGY----ALLHFFSDAAYNLTGFNITY 245
+ S PL + +P ++ Y A + F SD + + GFNIT+
Sbjct: 982 ENGSFTQPL----------RQLTGSRLPAPISAGLYGNFTAQVRFISDFSMSYEGFNITF 1031
Query: 246 S-FDMCP 251
S +D+ P
Sbjct: 1032 SEYDLEP 1038
Score = 42.4 bits (98), Expect = 0.003
Identities = 48/188 (25%), Positives = 66/188 (35%), Gaps = 39/188 (20%)
Query: 92 GSAAAEAKECDRP------CVNGGRCNPG---TGQCVCPAGWVGEQ---CQH-------- 131
G A E +EC P V G N G T +C+ G CQH
Sbjct: 2114 GCEAYELQECPDPEPFANGIVRGAGYNVGQSVTFECLPGYQLTGHPVLTCQHGTNRNWDH 2173
Query: 132 --------CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSW 183
CGG + + + P Y C WLI +RL + TE S
Sbjct: 2174 PLPKCEVPCGGNITSSNGTVYSPGFPSPYSSSQDCVWLITVPIGHGVRLNLSLLQTEPSG 2233
Query: 184 DHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNI 243
D + ++DG AP + F+ + + V ++S LL F DAA TG
Sbjct: 2234 DFITIWDGPQQTAPRLGVFTRSMAKK--------TVQSSSNQVLLKFHRDAA---TGGIF 2282
Query: 244 TYSFDMCP 251
+F P
Sbjct: 2283 AIAFSAYP 2290
Score = 40.0 bits (92), Expect = 0.016
Identities = 46/178 (25%), Positives = 66/178 (37%), Gaps = 16/178 (8%)
Query: 76 LLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVCPAG----WVGE--QC 129
L PCE A + G C G R GT + C G W +C
Sbjct: 1036 LEPCEEPEVPAYSIRKGLQFGVGDTLTFSCFPGYRLE-GTARITCLGGRRRLWSSPLPRC 1094
Query: 130 -QHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYV 188
CG T + + P NY +C + I+ QP + ++L+ F D L V
Sbjct: 1095 VAECGNSVTGTQGTLLSPNFPVNYNNNHECIYSIQTQPGKGIQLKARAFELS-EGDVLKV 1153
Query: 189 YDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYS 246
YDG++ A L+ FS + +TS L F +DA GF + +S
Sbjct: 1154 YDGNNNSARLLGVFS-------HSEMMGVTLNSTSSSLWLDFITDAENTSKGFELHFS 1204
>gi|219842266 usherin isoform B [Homo sapiens]
Length = 5202
Score = 69.3 bits (168), Expect = 2e-11
Identities = 69/264 (26%), Positives = 97/264 (36%), Gaps = 48/264 (18%)
Query: 928 QCRTPCALRTACGDCTSGSSECMWCSNMKQC--VDSNAYVASFPFGQCMEWYTMSTCPPE 985
QC ++ C SG EC + QC N Y + + T + P
Sbjct: 748 QCNLHGSVNKFCNP-HSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACDCDTAGSLPGT 806
Query: 986 NCS---GYCTCSHCLEQPGCGWCTD--------------PSNTGKGKCIEGSYKGPVKMP 1028
C+ G C C +E C C + P N K I GS K
Sbjct: 807 VCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCN-KST 865
Query: 1029 SQAP-----TGNFYPQPLLNSSMCLEDSRYNWS---FIHCPACQCNGHSKCINQSICEK- 1079
Q P TG L + C E RYN + F HC C+C+ + +IC+
Sbjct: 866 GQCPCKLGVTG-------LRCNQC-EPHRYNLTIDNFQHCQMCECDSLGT-LPGTICDPI 916
Query: 1080 -----CENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS---LCNTNTGKCFCTTKG 1131
C G+ C C GFY P N C PC C+ + +CN+ TG+C C
Sbjct: 917 SGQCLCVPNRQGRRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNSLTGQCVCQDAS 976
Query: 1132 VKGDECQLCEVENRYQGNPLRGTC 1155
+ G C C+ ++ + +P G C
Sbjct: 977 IAGQRCDQCK-DHYFGFDPQTGRC 999
Score = 62.0 bits (149), Expect = 4e-09
Identities = 66/254 (25%), Positives = 96/254 (37%), Gaps = 42/254 (16%)
Query: 909 CINPLNGSVCERPANHSAKQCRTPCALRTACGDC---TSGSSE-CMWCSNMKQCVDSNAY 964
C + G CE ++ +Q + C C T G+ + C + + +
Sbjct: 608 CEHNTTGRNCELCKDYFFRQVGADPSAIDVCKPCDCDTVGTRNGSILCDQIGGQCNCKRH 667
Query: 965 VASFPFGQCME-WYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKG 1023
V+ QC +Y + P+ CS C C+ G C N+G+ KC + + G
Sbjct: 668 VSGRQCNQCQNGFYNLQELDPDGCSP-CNCNTSGTVDGDITCHQ--NSGQCKC-KANVIG 723
Query: 1024 PVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSF--IHCPACQCNGHSK----CINQSIC 1077
L C ++ SF + C CQCN H C S
Sbjct: 724 ------------------LRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQ 765
Query: 1078 EKCENLTTGKHCETCISGFYG-DPTNGGKCQPCKCNGHASL----CNTNTGKCFCTTKGV 1132
+C+ G C+TC FYG D TN C+ C C+ SL CN TG+C C V
Sbjct: 766 CECKKEAKGLQCDTCRENFYGLDVTN---CKACDCDTAGSLPGTVCNAKTGQCIC-KPNV 821
Query: 1133 KGDECQLCEVENRY 1146
+G +C C N Y
Sbjct: 822 EGRQCNKCLEGNFY 835
Score = 61.2 bits (147), Expect = 7e-09
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 26/108 (24%)
Query: 1059 HCPACQCNGHSKCINQSI----------------CEKCENLTTGKHCETCISGFY----G 1098
+C CQCN HSK + +I C+ CE+ TTG++CE C F+
Sbjct: 571 NCKPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGA 630
Query: 1099 DPTNGGKCQPCKCN-----GHASLCNTNTGKCFCTTKGVKGDECQLCE 1141
DP+ C+PC C+ + LC+ G+C C + V G +C C+
Sbjct: 631 DPSAIDVCKPCDCDTVGTRNGSILCDQIGGQCNC-KRHVSGRQCNQCQ 677
Score = 53.9 bits (128), Expect = 1e-06
Identities = 58/236 (24%), Positives = 85/236 (36%), Gaps = 63/236 (26%)
Query: 913 LNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQ 972
+NGS+ N S QC PC L C C + N + +F Q
Sbjct: 855 INGSLL---CNKSTGQC--PCKLGVT-------GLRCNQCEPHRY----NLTIDNFQHCQ 898
Query: 973 CMEWYTMSTCPPENC---SGYCTCSHCLEQPGCGWCTDPSNTGK--GKCIEGSYKGPVKM 1027
E ++ T P C SG C C P+ G+ +C G Y P
Sbjct: 899 MCECDSLGTLPGTICDPISGQCLCV-------------PNRQGRRCNQCQPGFYISPG-- 943
Query: 1028 PSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGK 1087
N++ CL S + ++ G C + SI G+
Sbjct: 944 ---------------NATGCLPCSCHTTGAVNHICNSLTGQCVCQDASIA--------GQ 980
Query: 1088 HCETCISGFYGDPTNGGKCQPCKCNGHASL---CNTNTGKCFCTTKGVKGDECQLC 1140
C+ C ++G G+CQPC C+ +L C+ TG+CFC + V G +C C
Sbjct: 981 RCDQCKDHYFGFDPQTGRCQPCNCHLSGALNETCHLVTGQCFC-KQFVTGSKCDAC 1035
Score = 51.6 bits (122), Expect = 5e-06
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 25/104 (24%)
Query: 1063 CQCNGHS-KCINQSICEKC----ENLTTGKHCETCISGFYGDPTNGG------KCQPCKC 1111
CQC+GH+ C S +C E+ T G HC+ C+ + P G C+PC+C
Sbjct: 518 CQCHGHADNCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFRQGDQVYAFNCKPCQC 577
Query: 1112 NGHASLCNTNT--------------GKCFCTTKGVKGDECQLCE 1141
N H+ C+ N G C G C+LC+
Sbjct: 578 NSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCK 621
Score = 38.9 bits (89), Expect = 0.036
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 224 GYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGECKISNSSDTVECE-CSENWKGEAC 282
G+ L F+D N+ S + N SG+ ECK + ++C+ C EN+ G
Sbjct: 732 GFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECK--KEAKGLQCDTCRENFYG--L 787
Query: 283 DIPHC----TDNCGFPHRGICNSSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLK 338
D+ +C D G +CN+ + C C + +G C+ + N F+ R+ S L
Sbjct: 788 DVTNCKACDCDTAGSLPGTVCNAKTGQ-CICKPNVEGRQCNKCLEGN--FYLRQNNSFLC 844
Query: 339 LP-RASHKAVVNGNIM 353
LP +NG+++
Sbjct: 845 LPCNCDKTGTINGSLL 860
Score = 36.2 bits (82), Expect = 0.23
Identities = 62/239 (25%), Positives = 89/239 (37%), Gaps = 53/239 (22%)
Query: 97 EAKECDRP-CVNGGRCNPGTGQCVCPAGWVGEQCQHC-GGRFRLTGSSGFV-----TDGP 149
+A +CD + G CN TGQC+C G QC C G F L ++ F+ D
Sbjct: 793 KACDCDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKT 852
Query: 150 GNYKYKTKCTWLIEGQPNR--IMRLRFN------HFATECSWDHLYVYDGDS---IYAPL 198
G C P + + LR N + T ++ H + + DS + +
Sbjct: 853 GTINGSLLCNKSTGQCPCKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTI 912
Query: 199 VAAFSG--LIVPERDG---NETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNN 253
SG L VP R G N+ P + G N TG P +
Sbjct: 913 CDPISGQCLCVPNRQGRRCNQCQPGFYISPG------------NATG--------CLPCS 952
Query: 254 CSGRGECKISNSSDTVECECSE-NWKGEACDIPHCTDN-CGF-PHRGICNSSDVRGCSC 309
C G +S T +C C + + G+ CD C D+ GF P G C + C+C
Sbjct: 953 CHTTGAVNHICNSLTGQCVCQDASIAGQRCD--QCKDHYFGFDPQTGRC-----QPCNC 1004
Score = 33.1 bits (74), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 111 CNPGTGQCVCPAGWVGEQCQHCGGRFRLTGS 141
C+ +GQC C A +G +C HC F+ S
Sbjct: 708 CHQNSGQCKCKANVIGLRCDHCNFGFKFLRS 738
>gi|219842259 usherin isoform A [Homo sapiens]
Length = 1546
Score = 69.3 bits (168), Expect = 2e-11
Identities = 69/264 (26%), Positives = 97/264 (36%), Gaps = 48/264 (18%)
Query: 928 QCRTPCALRTACGDCTSGSSECMWCSNMKQC--VDSNAYVASFPFGQCMEWYTMSTCPPE 985
QC ++ C SG EC + QC N Y + + T + P
Sbjct: 748 QCNLHGSVNKFCNP-HSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACDCDTAGSLPGT 806
Query: 986 NCS---GYCTCSHCLEQPGCGWCTD--------------PSNTGKGKCIEGSYKGPVKMP 1028
C+ G C C +E C C + P N K I GS K
Sbjct: 807 VCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGTINGSLLCN-KST 865
Query: 1029 SQAP-----TGNFYPQPLLNSSMCLEDSRYNWS---FIHCPACQCNGHSKCINQSICEK- 1079
Q P TG L + C E RYN + F HC C+C+ + +IC+
Sbjct: 866 GQCPCKLGVTG-------LRCNQC-EPHRYNLTIDNFQHCQMCECDSLGT-LPGTICDPI 916
Query: 1080 -----CENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHAS---LCNTNTGKCFCTTKG 1131
C G+ C C GFY P N C PC C+ + +CN+ TG+C C
Sbjct: 917 SGQCLCVPNRQGRRCNQCQPGFYISPGNATGCLPCSCHTTGAVNHICNSLTGQCVCQDAS 976
Query: 1132 VKGDECQLCEVENRYQGNPLRGTC 1155
+ G C C+ ++ + +P G C
Sbjct: 977 IAGQRCDQCK-DHYFGFDPQTGRC 999
Score = 62.0 bits (149), Expect = 4e-09
Identities = 66/254 (25%), Positives = 96/254 (37%), Gaps = 42/254 (16%)
Query: 909 CINPLNGSVCERPANHSAKQCRTPCALRTACGDC---TSGSSE-CMWCSNMKQCVDSNAY 964
C + G CE ++ +Q + C C T G+ + C + + +
Sbjct: 608 CEHNTTGRNCELCKDYFFRQVGADPSAIDVCKPCDCDTVGTRNGSILCDQIGGQCNCKRH 667
Query: 965 VASFPFGQCME-WYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKG 1023
V+ QC +Y + P+ CS C C+ G C N+G+ KC + + G
Sbjct: 668 VSGRQCNQCQNGFYNLQELDPDGCSP-CNCNTSGTVDGDITCHQ--NSGQCKC-KANVIG 723
Query: 1024 PVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSF--IHCPACQCNGHSK----CINQSIC 1077
L C ++ SF + C CQCN H C S
Sbjct: 724 ------------------LRCDHCNFGFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQ 765
Query: 1078 EKCENLTTGKHCETCISGFYG-DPTNGGKCQPCKCNGHASL----CNTNTGKCFCTTKGV 1132
+C+ G C+TC FYG D TN C+ C C+ SL CN TG+C C V
Sbjct: 766 CECKKEAKGLQCDTCRENFYGLDVTN---CKACDCDTAGSLPGTVCNAKTGQCIC-KPNV 821
Query: 1133 KGDECQLCEVENRY 1146
+G +C C N Y
Sbjct: 822 EGRQCNKCLEGNFY 835
Score = 61.2 bits (147), Expect = 7e-09
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 26/108 (24%)
Query: 1059 HCPACQCNGHSKCINQSI----------------CEKCENLTTGKHCETCISGFY----G 1098
+C CQCN HSK + +I C+ CE+ TTG++CE C F+
Sbjct: 571 NCKPCQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGA 630
Query: 1099 DPTNGGKCQPCKCN-----GHASLCNTNTGKCFCTTKGVKGDECQLCE 1141
DP+ C+PC C+ + LC+ G+C C + V G +C C+
Sbjct: 631 DPSAIDVCKPCDCDTVGTRNGSILCDQIGGQCNC-KRHVSGRQCNQCQ 677
Score = 53.9 bits (128), Expect = 1e-06
Identities = 58/236 (24%), Positives = 85/236 (36%), Gaps = 63/236 (26%)
Query: 913 LNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQ 972
+NGS+ N S QC PC L C C + N + +F Q
Sbjct: 855 INGSLL---CNKSTGQC--PCKLGVT-------GLRCNQCEPHRY----NLTIDNFQHCQ 898
Query: 973 CMEWYTMSTCPPENC---SGYCTCSHCLEQPGCGWCTDPSNTGK--GKCIEGSYKGPVKM 1027
E ++ T P C SG C C P+ G+ +C G Y P
Sbjct: 899 MCECDSLGTLPGTICDPISGQCLCV-------------PNRQGRRCNQCQPGFYISPG-- 943
Query: 1028 PSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGK 1087
N++ CL S + ++ G C + SI G+
Sbjct: 944 ---------------NATGCLPCSCHTTGAVNHICNSLTGQCVCQDASIA--------GQ 980
Query: 1088 HCETCISGFYGDPTNGGKCQPCKCNGHASL---CNTNTGKCFCTTKGVKGDECQLC 1140
C+ C ++G G+CQPC C+ +L C+ TG+CFC + V G +C C
Sbjct: 981 RCDQCKDHYFGFDPQTGRCQPCNCHLSGALNETCHLVTGQCFC-KQFVTGSKCDAC 1035
Score = 51.6 bits (122), Expect = 5e-06
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 25/104 (24%)
Query: 1063 CQCNGHS-KCINQSICEKC----ENLTTGKHCETCISGFYGDPTNGG------KCQPCKC 1111
CQC+GH+ C S +C E+ T G HC+ C+ + P G C+PC+C
Sbjct: 518 CQCHGHADNCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFRQGDQVYAFNCKPCQC 577
Query: 1112 NGHASLCNTNT--------------GKCFCTTKGVKGDECQLCE 1141
N H+ C+ N G C G C+LC+
Sbjct: 578 NSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCK 621
Score = 38.9 bits (89), Expect = 0.036
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 224 GYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGECKISNSSDTVECE-CSENWKGEAC 282
G+ L F+D N+ S + N SG+ ECK + ++C+ C EN+ G
Sbjct: 732 GFKFLRSFNDVGCEPCQCNLHGSVNKFCNPHSGQCECK--KEAKGLQCDTCRENFYG--L 787
Query: 283 DIPHC----TDNCGFPHRGICNSSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLK 338
D+ +C D G +CN+ + C C + +G C+ + N F+ R+ S L
Sbjct: 788 DVTNCKACDCDTAGSLPGTVCNAKTGQ-CICKPNVEGRQCNKCLEGN--FYLRQNNSFLC 844
Query: 339 LP-RASHKAVVNGNIM 353
LP +NG+++
Sbjct: 845 LPCNCDKTGTINGSLL 860
Score = 36.2 bits (82), Expect = 0.23
Identities = 62/239 (25%), Positives = 89/239 (37%), Gaps = 53/239 (22%)
Query: 97 EAKECDRP-CVNGGRCNPGTGQCVCPAGWVGEQCQHC-GGRFRLTGSSGFV-----TDGP 149
+A +CD + G CN TGQC+C G QC C G F L ++ F+ D
Sbjct: 793 KACDCDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKT 852
Query: 150 GNYKYKTKCTWLIEGQPNR--IMRLRFN------HFATECSWDHLYVYDGDS---IYAPL 198
G C P + + LR N + T ++ H + + DS + +
Sbjct: 853 GTINGSLLCNKSTGQCPCKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDSLGTLPGTI 912
Query: 199 VAAFSG--LIVPERDG---NETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNN 253
SG L VP R G N+ P + G N TG P +
Sbjct: 913 CDPISGQCLCVPNRQGRRCNQCQPGFYISPG------------NATG--------CLPCS 952
Query: 254 CSGRGECKISNSSDTVECECSE-NWKGEACDIPHCTDN-CGF-PHRGICNSSDVRGCSC 309
C G +S T +C C + + G+ CD C D+ GF P G C + C+C
Sbjct: 953 CHTTGAVNHICNSLTGQCVCQDASIAGQRCD--QCKDHYFGFDPQTGRC-----QPCNC 1004
Score = 33.1 bits (74), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 111 CNPGTGQCVCPAGWVGEQCQHCGGRFRLTGS 141
C+ +GQC C A +G +C HC F+ S
Sbjct: 708 CHQNSGQCKCKANVIGLRCDHCNFGFKFLRS 738
>gi|181336739 multiple EGF-like-domains 11 [Homo sapiens]
Length = 1044
Score = 68.9 bits (167), Expect = 3e-11
Identities = 68/253 (26%), Positives = 96/253 (37%), Gaps = 35/253 (13%)
Query: 104 PCVNGGRCNPGTGQCVCPAGWVGEQC-QHCG-GRFRLTGSSGFVTDGPGNYKYKT-KCTW 160
PC NGG C+ TG+C CP GW G C Q C G F S G + T +C
Sbjct: 233 PCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHC 292
Query: 161 LIEGQPNRIMR-LRFNHFATECSWDHLYVYDGDSIYAPLVAA------FSGLIVPERDGN 213
+R F F +CS H ++G +P A + G ER
Sbjct: 293 TAGYMGDRCQEECPFGSFGFQCS-QHCDCHNGGQC-SPTTGACECEPGYKGPRCQERLCP 350
Query: 214 E-------TVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRG---ECKIS 263
E T+P H + A G++ + + CP G G C
Sbjct: 351 EGLHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQ 410
Query: 264 NSSD----TVECECSENWKGEACDI--------PHCTDNCGFPHRGICNSSDVRGCSCFS 311
N +D T C C+ + GE C + P+C+ C + G C+ D C+C
Sbjct: 411 NGADCHSITGGCTCAPGFMGEVCAVSCAAGTYGPNCSSICSCNNGGTCSPVD-GSCTCKE 469
Query: 312 DWQGPGCSVPVPA 324
WQG C++P P+
Sbjct: 470 GWQGLDCTLPCPS 482
Score = 54.3 bits (129), Expect = 8e-07
Identities = 71/265 (26%), Positives = 97/265 (36%), Gaps = 56/265 (21%)
Query: 908 TCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQC--VDSNAYV 965
TC +P++GS C C PC T +C +E C+N C +D +
Sbjct: 457 TC-SPVDGS-CTCKEGWQGLDCTLPCPSGTWGLNC----NESCTCANGAACSPIDGSCSC 510
Query: 966 ASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPV 1025
G E NCS +C CSH GC DP TG C+ G + G +
Sbjct: 511 TPGWLGDTCELPCPDGTFGLNCSEHCDCSHA---DGC----DPV-TGHCCCLAG-WTG-I 560
Query: 1026 KMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTT 1085
+ S P G + P N S+ +C C C + +C
Sbjct: 561 RCDSTCPPGRWGP----NCSV---------------SCSCENGGSCSPEDGSCECAPGFR 601
Query: 1086 GKHCE-TCISGFYGDPTNGGKCQPCKCNGHASL-CNTNTGKCFC------------TTKG 1131
G C+ C GFYG G QPC H+S C+ +G C C G
Sbjct: 602 GPLCQRICPPGFYGH----GCAQPCPLCVHSSRPCHHISGICECLPGFSGALCNQVCAGG 657
Query: 1132 VKGDEC-QLCEVENRYQGNPLRGTC 1155
G +C QLC N +P+ G+C
Sbjct: 658 YFGQDCAQLCSCANNGTCSPIDGSC 682
Score = 52.0 bits (123), Expect = 4e-06
Identities = 66/261 (25%), Positives = 89/261 (34%), Gaps = 59/261 (22%)
Query: 909 CINPLNGSVCER--PANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDS----- 961
C G +C+R P C PC L C S C S + +C+
Sbjct: 596 CAPGFRGPLCQRICPPGFYGHGCAQPCPL------CVHSSRPCHHISGICECLPGFSGAL 649
Query: 962 -NAYVASFPFGQ-CMEWYTMS---TCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKG-- 1014
N A FGQ C + + + TC P G C C C P G
Sbjct: 650 CNQVCAGGYFGQDCAQLCSCANNGTCSP--IDGSCQCFPGWIGKDCSQACPPGFWGPACF 707
Query: 1015 ---KCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPA--------- 1062
C G+ A G + P C + CPA
Sbjct: 708 HACSCHNGA-------SCSAEDGACHCTPGWTGLFCTQ---------RCPAAFFGKDCGR 751
Query: 1063 -CQCNGHSKCINQSICEKCENLTTGKHCE-TCISGFYGDPTNGGKCQPCKCNGHASLCNT 1120
CQC + C + S C TG+HCE C G +G G Q C+C + S C+
Sbjct: 752 VCQCQNGASCDHISGKCTCRTGFTGQHCEQRCAPGTFG----YGCQQLCECMNN-STCDH 806
Query: 1121 NTGKCFCTT--KGVKGDECQL 1139
TG C+C+ KG++ D+ L
Sbjct: 807 VTGTCYCSPGFKGIRCDQAAL 827
Score = 48.5 bits (114), Expect = 5e-05
Identities = 64/243 (26%), Positives = 81/243 (33%), Gaps = 65/243 (26%)
Query: 941 DCTSGSSECMW---CSNMKQCVDSNAYVASFPFGQCM------EWYTMSTCPP----ENC 987
DC+SG W CSN QC N + + G C+ W C P + C
Sbjct: 128 DCSSGCDSDHWGPHCSNRCQC--QNGALCNPITGACVCAAGFRGWRCEELCAPGTHGKGC 185
Query: 988 SGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMC 1047
C C H G DP G+ C G Y G + +C
Sbjct: 186 QLPCQCRH-------GASCDP-RAGECLCAPG-YTG-----------------VYCEELC 219
Query: 1048 LEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHC-ETCISGFYGDPTNGGKC 1106
S + CP CQ G I C TG C + C G +G +
Sbjct: 220 PPGSHGAHCELRCP-CQNGGTCHHITGECA--CPPGWTGAVCAQPCPPGTFGQNCS---- 272
Query: 1107 QPCKCNGHASLCNTNTGKCFCTTKGVKGDEC--------------QLCEVENRYQGNPLR 1152
Q C C+ H C+ TG+C CT G GD C Q C+ N Q +P
Sbjct: 273 QDCPCH-HGGQCDHVTGQCHCTA-GYMGDRCQEECPFGSFGFQCSQHCDCHNGGQCSPTT 330
Query: 1153 GTC 1155
G C
Sbjct: 331 GAC 333
Score = 47.4 bits (111), Expect = 1e-04
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Query: 253 NCSGRGECKISNSSDTVE--CECSENWKGEACDIP--------HCTDNCGFPHRGICNSS 302
NCS C + V+ C C E W+G C +P +C ++C + C+
Sbjct: 445 NCSSICSCNNGGTCSPVDGSCTCKEGWQGLDCTLPCPSGTWGLNCNESCTCANGAACSPI 504
Query: 303 DVRGCSCFSDWQGPGCSVPVP 323
D CSC W G C +P P
Sbjct: 505 D-GSCSCTPGWLGDTCELPCP 524
Score = 44.7 bits (104), Expect = 7e-04
Identities = 54/229 (23%), Positives = 75/229 (32%), Gaps = 47/229 (20%)
Query: 105 CVNGGRCNPGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEG 164
C NG CNP TG CVC AG+ G +C+ G+ G P ++ C
Sbjct: 148 CQNGALCNPITGACVCAAGFRGWRCE----ELCAPGTHGKGCQLPCQCRHGASC------ 197
Query: 165 QPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSG 224
+ A EC Y +Y L P G +G
Sbjct: 198 ----------DPRAGECLCAPGYT----GVYC------EELCPPGSHGAHCELRCPCQNG 237
Query: 225 YALLHFFSDAAYNLTGFNITYSFDMCP-----NNCSGRGECKISNSSD--TVECECSENW 277
H + A G+ CP NCS C D T +C C+ +
Sbjct: 238 GTCHHITGECACP-PGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGY 296
Query: 278 KGEAC--DIP------HCTDNCGFPHRGICNSSDVRGCSCFSDWQGPGC 318
G+ C + P C+ +C + G C S C C ++GP C
Sbjct: 297 MGDRCQEECPFGSFGFQCSQHCDCHNGGQC-SPTTGACECEPGYKGPRC 344
Score = 42.4 bits (98), Expect = 0.003
Identities = 55/247 (22%), Positives = 75/247 (30%), Gaps = 56/247 (22%)
Query: 99 KECDRPCV--NGGRCNPGTGQCVCPAGWVGEQCQ----------HCGGRFRLTGSSGFVT 146
K C PC +G C+P G+C+C G+ G C+ HC R + G
Sbjct: 183 KGCQLPCQCRHGASCDPRAGECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQ-NGGTCH 241
Query: 147 DGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLI 206
G T + QP F CS D + G
Sbjct: 242 HITGECACPPGWTGAVCAQP-----CPPGTFGQNCSQDCPCHHGGQC------------- 283
Query: 207 VPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGECKISNSS 266
+ + T+GY + + GF + D C G+C S
Sbjct: 284 ------DHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCD-----CHNGGQC----SP 328
Query: 267 DTVECECSENWKGEACDI---------PHCTDNCGFPHRGICNSSDVRG-CSCFSDWQGP 316
T CEC +KG C P CT C + V G C+C W G
Sbjct: 329 TTGACECEPGYKGPRCQERLCPEGLHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGH 388
Query: 317 GCSVPVP 323
C+ P
Sbjct: 389 HCNESCP 395
Score = 40.8 bits (94), Expect = 0.009
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 98 AKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQ 130
++ CD C NGG+C+P TG C C G+ G +CQ
Sbjct: 315 SQHCD--CHNGGQCSPTTGACECEPGYKGPRCQ 345
Score = 40.8 bits (94), Expect = 0.009
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 18/90 (20%)
Query: 250 CPN-----NCSGRGECKISNSSDTVE--CECSENWKGEACDIP--------HCTDNCGFP 294
CP+ NC+ C + ++ C C+ W G+ C++P +C+++C
Sbjct: 480 CPSGTWGLNCNESCTCANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCS 539
Query: 295 HRGICNSSDVRG-CSCFSDWQGPGCSVPVP 323
H C+ V G C C + W G C P
Sbjct: 540 HADGCD--PVTGHCCCLAGWTGIRCDSTCP 567
Score = 39.7 bits (91), Expect = 0.021
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 79 CEAEAAAAAAAVSGSAAAEAKECDR--PCVNGGRCNPGTGQCVCPAGWVGEQC 129
C AVS +A C C NGG C+P G C C GW G C
Sbjct: 424 CAPGFMGEVCAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSCTCKEGWQGLDC 476
Score = 38.5 bits (88), Expect = 0.047
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 105 CVNGGRCNPGTGQCVCPAGWVGEQCQ 130
C NG C+P G C C GW+G+ C+
Sbjct: 495 CANGAACSPIDGSCSCTPGWLGDTCE 520
Score = 37.4 bits (85), Expect = 0.10
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 105 CVNGGRCNPGTGQCVCPAGWVGEQC 129
C N G C+P G C C GW+G+ C
Sbjct: 669 CANNGTCSPIDGSCQCFPGWIGKDC 693
Score = 36.6 bits (83), Expect = 0.18
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 19/70 (27%)
Query: 79 CEAEAAAAAAAVSGSAAAE----AKECDRPCVNG---------------GRCNPGTGQCV 119
C AA + + GS + C+ PC +G C+P TG C
Sbjct: 493 CTCANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCC 552
Query: 120 CPAGWVGEQC 129
C AGW G +C
Sbjct: 553 CLAGWTGIRC 562
Score = 35.8 bits (81), Expect = 0.30
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 11/67 (16%)
Query: 271 CECSENWKGEACDI--------PHCTDNCGFPHRGICNSSDVRGCSCFSDWQGPGCSVPV 322
CEC + G C+ C C + G C+ D C CF W G CS
Sbjct: 639 CECLPGFSGALCNQVCAGGYFGQDCAQLCSCANNGTCSPID-GSCQCFPGWIGKDCSQAC 697
Query: 323 PANQSFW 329
P FW
Sbjct: 698 P--PGFW 702
Score = 35.8 bits (81), Expect = 0.30
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 13/80 (16%)
Query: 253 NCSGRGECKISNSSDTVECECSENWKGEACDI--------PHCTDNCGFPHRGICNSSDV 304
+C+ G C + S C+C W G+ C P C C H G S++
Sbjct: 668 SCANNGTCSPIDGS----CQCFPGWIGKDCSQACPPGFWGPACFHACSC-HNGASCSAED 722
Query: 305 RGCSCFSDWQGPGCSVPVPA 324
C C W G C+ PA
Sbjct: 723 GACHCTPGWTGLFCTQRCPA 742
Score = 35.8 bits (81), Expect = 0.30
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 94 AAAEAKECDR--PCVNGGRCNPGTGQCVCPAGWVGEQCQ 130
AA K+C R C NG C+ +G+C C G+ G+ C+
Sbjct: 742 AAFFGKDCGRVCQCQNGASCDHISGKCTCRTGFTGQHCE 780
Score = 35.4 bits (80), Expect = 0.40
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 19/81 (23%)
Query: 68 LSPPLLLLLLPCEAEAAAAAAAVSGSAAAE-----------------AKECDRPCV--NG 108
L P L PC+A+ + V+G+ + C PC NG
Sbjct: 353 LHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNG 412
Query: 109 GRCNPGTGQCVCPAGWVGEQC 129
C+ TG C C G++GE C
Sbjct: 413 ADCHSITGGCTCAPGFMGEVC 433
Score = 35.0 bits (79), Expect = 0.52
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 105 CVNGGRCNPGTGQCVCPAGWVGEQCQ 130
C NGG C+P G C C G+ G CQ
Sbjct: 581 CENGGSCSPEDGSCECAPGFRGPLCQ 606
Score = 34.3 bits (77), Expect = 0.88
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 15/82 (18%)
Query: 245 YSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDI--------PHCTDNCGFPHR 296
+ +C C G C S DT C C W G C PHC++ C +
Sbjct: 98 FCIPLCTEECV-HGRCV---SPDT--CHCEPGWGGPDCSSGCDSDHWGPHCSNRCQCQNG 151
Query: 297 GICNSSDVRGCSCFSDWQGPGC 318
+CN C C + ++G C
Sbjct: 152 ALCNPI-TGACVCAAGFRGWRC 172
Score = 32.3 bits (72), Expect = 3.4
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 105 CVNGGRCNPGTGQCVCPAGWVGEQC-QHCGGRF 136
C NG C+ G C C GW G C Q C F
Sbjct: 712 CHNGASCSAEDGACHCTPGWTGLFCTQRCPAAF 744
Score = 31.6 bits (70), Expect = 5.7
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 279 GEACDIPHCTDNCGFPHRGICNSSDVRGCSCFSDWQGPGCS 319
G+ C IP CT+ C G C S D C C W GP CS
Sbjct: 96 GDFC-IPLCTEECV---HGRCVSPDT--CHCEPGWGGPDCS 130
>gi|38045890 CUB and Sushi multiple domains 3 isoform 2 [Homo
sapiens]
Length = 3667
Score = 67.8 bits (164), Expect = 7e-11
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG F PG YK C W+IE +P +++ F F TE ++D L V+DG
Sbjct: 855 CGGHFSAPSGVILSPGWPGYYKDSLNCEWVIEAEPGHSIKITFERFQTELNYDVLEVHDG 914
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
++ +PL+ +++G VP+ + ++S + L F +D + + GF I Y
Sbjct: 915 PNLLSPLLGSYNGTQVPQ--------FLFSSSNFIYLLFTTDNSRSNNGFKIHY 960
Score = 67.8 bits (164), Expect = 7e-11
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG LTGSSGF+ P Y + C W I + ++ L F F+ E ++D LY+Y
Sbjct: 1548 CGGN--LTGSSGFILSPNFPHPYPHSRDCDWTITVNADYVISLAFISFSIEPNYDFLYIY 1605
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
DG +PL+ +F +PER + ++S L F SD + + TGF++ Y
Sbjct: 1606 DGPDSNSPLIGSFQDSKLPER--------IESSSNTMHLAFRSDGSVSYTGFHLEY 1653
Score = 60.8 bits (146), Expect = 9e-09
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 132 CGGRFRLTGSSGFVTDG-PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYD 190
CGGRF+ S ++ G P Y +C W+IE P I+ L+F F TE S D L V+D
Sbjct: 1374 CGGRFKGESSGRILSPGYPFPYDNNLRCMWMIEVDPGNIVSLQFLAFDTEASHDILRVWD 1433
Query: 191 GDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMC 250
G L+ SG ++PE + +T + F +D + +GF I +S +
Sbjct: 1434 GPPENDMLLKEISGSLIPE--------GIHSTLNIVTIQFDTDFYISKSGFAIQFSSSVA 1485
Query: 251 --------PNNCSGRGECKISNSSDTVECECSENWKGE 280
P N + G+ + + +C+ +GE
Sbjct: 1486 TACRDPGVPMNGTRNGDGREPGDTVVFQCDPGYELQGE 1523
Score = 58.5 bits (140), Expect = 4e-08
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 147 DGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLI 206
D P Y C W I P + L FN F E +D L V DGDS +P++ F+G
Sbjct: 696 DYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLESQFDFLAVKDGDSPESPILGTFTGAE 755
Query: 207 VPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGEC 260
VP + + S L F +D + + GFNITY N G EC
Sbjct: 756 VPS--------HLTSNSHILRLEFQADHSMSGRGFNITY-------NTFGHNEC 794
Score = 56.6 bits (135), Expect = 2e-07
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG R GSSG ++ P Y CTW I +P + L F F E +D+L +
Sbjct: 201 CGGTMR--GSSGIISSPSFPNEYHNNADCTWTIVAEPGDTISLIFTDFQMEEKYDYLEIE 258
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDM 249
+ P SG+ +P P +++ + LHF +D+ + GF+ Y
Sbjct: 259 GSE----PPTIWLSGMNIP--------PPIISNKNWLRLHFVTDSNHRYRGFSAPYQGSS 306
Query: 250 CPNNCSGRGECKISNSSDT 268
+ + GE + N + T
Sbjct: 307 TLTHTTSTGELEEHNRTTT 325
Score = 56.2 bits (134), Expect = 2e-07
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG + P Y C W I ++++ FATE +WD L YDG
Sbjct: 1899 CGGILTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGIQVQVVSFATEHNWDSLDFYDG 1958
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYS---FD 248
AP + ++SG +P + +TS L+F SD + + GF++ Y+ D
Sbjct: 1959 GDNNAPRLGSYSGTTIPHL--------LNSTSNNLYLNFQSDISVSAAGFHLEYTAIGLD 2010
Query: 249 MCPNNCSGRGECKISNS---SDTVECECSENW 277
CP + KI + D V +C + +
Sbjct: 2011 SCPEPQTPSSGIKIGDRYMVGDVVSFQCDQGY 2042
Score = 55.1 bits (131), Expect = 5e-07
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 39/187 (20%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG ++ SG + PGNY CTW I + L+F +F+TE D+L V
Sbjct: 2071 CGGA--MSDFSGVILSPGFPGNYPSSLDCTWTINLPIGFGVHLQFVNFSTETIHDYLEVR 2128
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNI---TYS 246
G S + ++ SG +P + +T+ L+F SD + N GF+I Y
Sbjct: 2129 SGSSETSTVIGRLSGPQIPS--------SLFSTTHETSLYFHSDYSQNKQGFHIVYQAYQ 2180
Query: 247 FDMCPNNCSGRGECKISNS---SDTVECEC------------------SENWKGEACDIP 285
CP+ R I N T+ EC S NW +P
Sbjct: 2181 LQSCPDPRPFRNGFVIGNDFTVGQTISFECFPGYTLIGNSALTCLHGVSRNWNH---PLP 2237
Query: 286 HCTDNCG 292
C CG
Sbjct: 2238 RCEALCG 2244
Score = 47.0 bits (110), Expect = 1e-04
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 132 CGGRFRLTGSSGFVTDGPG---NYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYV 188
CGG L G +G + + PG Y CTW+I + +++ F FA E +D+L +
Sbjct: 25 CGGT--LKGLNGTI-ESPGFPYGYPNGANCTWVIIAEERNRIQIVFQSFALEEEYDYLSL 81
Query: 189 YDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFD 248
YDG +G +P P V +T L SD A + GF + Y +
Sbjct: 82 YDGHPHPTNFRTRLTGFHLP--------PPVTSTKSVFSLRLTSDFAVSAHGFKVYYE-E 132
Query: 249 MCPNNCSGRG 258
+ ++C G
Sbjct: 133 LQSSSCGNPG 142
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG + + P Y C WL+ P + + F TE +D + V+DG
Sbjct: 2243 CGGNITAMNGTIYSPGYPDEYPNFQDCFWLVRVPPGNGIYINFTVLQTEPIYDFITVWDG 2302
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGF 241
+P + FS GN + V +TS L+ F SD + +GF
Sbjct: 2303 PDQNSPQIGQFS--------GNTALESVYSTSNQILIKFHSD--FTTSGF 2342
Score = 45.4 bits (106), Expect = 4e-04
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEG-QPNRIMRLRFNHFATECSWDHLYV 188
CG L G SG T P Y +C W+I N+++++ F F E +D L +
Sbjct: 508 CGSN--LQGPSGTFTSPNFPFQYDSNAQCVWVITAVNTNKVIQINFEEFDLEIGYDTLTI 565
Query: 189 YDGDSIYAP--LVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
DG + P ++ +G VP+ +V+ S LH +D + GF + Y
Sbjct: 566 GDGGEVGDPRTVLQVLTGSFVPDL--------IVSMSSQMWLHLQTDESVGSVGFKVNY 616
Score = 45.4 bits (106), Expect = 4e-04
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 31/184 (16%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG R G SG + P Y CTW ++ + ++ F+ F E D+L +
Sbjct: 1027 CGGDVR--GPSGTILSPGYPEFYPNSLNCTWTVDVTHGKGVQFNFHTFHLEDHHDYLLIT 1084
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNIT---YS 246
+ S PL A +G +P T+ + + A L F SD + + GFNIT Y+
Sbjct: 1085 ENGSFTQPL-ARLTGSDLP-----PTINAGLYGNFRAQLRFISDFSISYEGFNITFSEYN 1138
Query: 247 FDMCPNNCSGRGECKIS---NSSDTVECECSENWKGE---------------ACDIPHCT 288
+ C + + +I DT+ CS ++ E + +P C
Sbjct: 1139 LEPCEDPGIPQYGSRIGFNFGIGDTLTFSCSSGYRLEGTSEIICLGGGRRVWSAPLPRCV 1198
Query: 289 DNCG 292
CG
Sbjct: 1199 AECG 1202
Score = 42.4 bits (98), Expect = 0.003
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 19/139 (13%)
Query: 113 PGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGFVTDG-PGNYKYKTKCTWLIEGQPNRIMR 171
P Q +CPA RL + ++ G P +Y C W I + +
Sbjct: 2409 PPVCQVLCPAN-----------ELRLDSTGVILSPGYPDSYPNLQMCAWSISVEKGYNIT 2457
Query: 172 LRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFF 231
+ F TE +D L VYDG +I +P++ + SG + + + L +
Sbjct: 2458 MFVEFFQTEKEFDVLQVYDGPNIQSPVLISLSG-------DYSSAFNITSNGHEVFLQWS 2510
Query: 232 SDAAYNLTGFNITYSFDMC 250
+D N GF I Y C
Sbjct: 2511 ADHGNNKKGFRIRYIAFYC 2529
Score = 31.2 bits (69), Expect = 7.5
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 105 CVNGGRCNPGTGQCVCPAG----WVGE--QC-QHCGGRFRLTGSSGFVTDG--PGNYKYK 155
C +G R GT + +C G W +C CG T + G + P NY+
Sbjct: 1168 CSSGYRLE-GTSEIICLGGGRRVWSAPLPRCVAECGAS--ATNNEGILLSPNYPLNYENN 1224
Query: 156 TKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNET 215
+C + I+ Q + + + F D L +YDG L+ AF+G +
Sbjct: 1225 HECIYSIQVQAGKGINISARTFHL-AQGDVLKIYDGKDKTTHLLGAFTG-------ASMR 1276
Query: 216 VPEVVATSGYALLHFFSDAAYNLTGFNITY-SFDMCPNNCSGRG 258
+ +TS L F SD GF + Y SF++ ++C G
Sbjct: 1277 GLTLSSTSNQLWLEFNSDTEGTDEGFQLVYTSFEL--SHCEDPG 1318
>gi|205277354 CUB and Sushi multiple domains 3 isoform 3 [Homo
sapiens]
Length = 3538
Score = 67.8 bits (164), Expect = 7e-11
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG F PG YK C W+IE +P +++ F F TE ++D L V+DG
Sbjct: 791 CGGHFSAPSGVILSPGWPGYYKDSLNCEWVIEAEPGHSIKITFERFQTELNYDVLEVHDG 850
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
++ +PL+ +++G VP+ + ++S + L F +D + + GF I Y
Sbjct: 851 PNLLSPLLGSYNGTQVPQ--------FLFSSSNFIYLLFTTDNSRSNNGFKIHY 896
Score = 67.8 bits (164), Expect = 7e-11
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG LTGSSGF+ P Y + C W I + ++ L F F+ E ++D LY+Y
Sbjct: 1484 CGGN--LTGSSGFILSPNFPHPYPHSRDCDWTITVNADYVISLAFISFSIEPNYDFLYIY 1541
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
DG +PL+ +F +PER + ++S L F SD + + TGF++ Y
Sbjct: 1542 DGPDSNSPLIGSFQDSKLPER--------IESSSNTMHLAFRSDGSVSYTGFHLEY 1589
Score = 60.8 bits (146), Expect = 9e-09
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 132 CGGRFRLTGSSGFVTDG-PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYD 190
CGGRF+ S ++ G P Y +C W+IE P I+ L+F F TE S D L V+D
Sbjct: 1310 CGGRFKGESSGRILSPGYPFPYDNNLRCMWMIEVDPGNIVSLQFLAFDTEASHDILRVWD 1369
Query: 191 GDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMC 250
G L+ SG ++PE + +T + F +D + +GF I +S +
Sbjct: 1370 GPPENDMLLKEISGSLIPE--------GIHSTLNIVTIQFDTDFYISKSGFAIQFSSSVA 1421
Query: 251 --------PNNCSGRGECKISNSSDTVECECSENWKGE 280
P N + G+ + + +C+ +GE
Sbjct: 1422 TACRDPGVPMNGTRNGDGREPGDTVVFQCDPGYELQGE 1459
Score = 58.5 bits (140), Expect = 4e-08
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 147 DGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLI 206
D P Y C W I P + L FN F E +D L V DGDS +P++ F+G
Sbjct: 632 DYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLESQFDFLAVKDGDSPESPILGTFTGAE 691
Query: 207 VPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGEC 260
VP + + S L F +D + + GFNITY N G EC
Sbjct: 692 VPS--------HLTSNSHILRLEFQADHSMSGRGFNITY-------NTFGHNEC 730
Score = 56.2 bits (134), Expect = 2e-07
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG + P Y C W I ++++ FATE +WD L YDG
Sbjct: 1835 CGGILTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGIQVQVVSFATEHNWDSLDFYDG 1894
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYS---FD 248
AP + ++SG +P + +TS L+F SD + + GF++ Y+ D
Sbjct: 1895 GDNNAPRLGSYSGTTIPHL--------LNSTSNNLYLNFQSDISVSAAGFHLEYTAIGLD 1946
Query: 249 MCPNNCSGRGECKISNS---SDTVECECSENW 277
CP + KI + D V +C + +
Sbjct: 1947 SCPEPQTPSSGIKIGDRYMVGDVVSFQCDQGY 1978
Score = 55.1 bits (131), Expect = 5e-07
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 39/187 (20%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG ++ SG + PGNY CTW I + L+F +F+TE D+L V
Sbjct: 2007 CGGA--MSDFSGVILSPGFPGNYPSSLDCTWTINLPIGFGVHLQFVNFSTETIHDYLEVR 2064
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNI---TYS 246
G S + ++ SG +P + +T+ L+F SD + N GF+I Y
Sbjct: 2065 SGSSETSTVIGRLSGPQIPS--------SLFSTTHETSLYFHSDYSQNKQGFHIVYQAYQ 2116
Query: 247 FDMCPNNCSGRGECKISNS---SDTVECEC------------------SENWKGEACDIP 285
CP+ R I N T+ EC S NW +P
Sbjct: 2117 LQSCPDPRPFRNGFVIGNDFTVGQTISFECFPGYTLIGNSALTCLHGVSRNWNH---PLP 2173
Query: 286 HCTDNCG 292
C CG
Sbjct: 2174 RCEALCG 2180
Score = 53.1 bits (126), Expect = 2e-06
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG R GSSG ++ P Y CTW I +P + L F F E +D+L +
Sbjct: 241 CGGTMR--GSSGIISSPSFPNEYHNNADCTWTIVAEPGDTISLIFTDFQMEEKYDYLEIE 298
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
+ P SG+ +P P +++ + LHF +D+ + GF+ Y
Sbjct: 299 GSE----PPTIWLSGMNIP--------PPIISNKNWLRLHFVTDSNHRYRGFSAPY 342
Score = 47.0 bits (110), Expect = 1e-04
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 132 CGGRFRLTGSSGFVTDGPG---NYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYV 188
CGG L G +G + + PG Y CTW+I + +++ F FA E +D+L +
Sbjct: 65 CGGT--LKGLNGTI-ESPGFPYGYPNGANCTWVIIAEERNRIQIVFQSFALEEEYDYLSL 121
Query: 189 YDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFD 248
YDG +G +P P V +T L SD A + GF + Y +
Sbjct: 122 YDGHPHPTNFRTRLTGFHLP--------PPVTSTKSVFSLRLTSDFAVSAHGFKVYYE-E 172
Query: 249 MCPNNCSGRG 258
+ ++C G
Sbjct: 173 LQSSSCGNPG 182
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG + + P Y C WL+ P + + F TE +D + V+DG
Sbjct: 2179 CGGNITAMNGTIYSPGYPDEYPNFQDCFWLVRVPPGNGIYINFTVLQTEPIYDFITVWDG 2238
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGF 241
+P + FS GN + V +TS L+ F SD + +GF
Sbjct: 2239 PDQNSPQIGQFS--------GNTALESVYSTSNQILIKFHSD--FTTSGF 2278
Score = 45.4 bits (106), Expect = 4e-04
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEG-QPNRIMRLRFNHFATECSWDHLYV 188
CG L G SG T P Y +C W+I N+++++ F F E +D L +
Sbjct: 444 CGSN--LQGPSGTFTSPNFPFQYDSNAQCVWVITAVNTNKVIQINFEEFDLEIGYDTLTI 501
Query: 189 YDGDSIYAP--LVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
DG + P ++ +G VP+ +V+ S LH +D + GF + Y
Sbjct: 502 GDGGEVGDPRTVLQVLTGSFVPDL--------IVSMSSQMWLHLQTDESVGSVGFKVNY 552
Score = 45.4 bits (106), Expect = 4e-04
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 31/184 (16%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG R G SG + P Y CTW ++ + ++ F+ F E D+L +
Sbjct: 963 CGGDVR--GPSGTILSPGYPEFYPNSLNCTWTVDVTHGKGVQFNFHTFHLEDHHDYLLIT 1020
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNIT---YS 246
+ S PL A +G +P T+ + + A L F SD + + GFNIT Y+
Sbjct: 1021 ENGSFTQPL-ARLTGSDLP-----PTINAGLYGNFRAQLRFISDFSISYEGFNITFSEYN 1074
Query: 247 FDMCPNNCSGRGECKIS---NSSDTVECECSENWKGE---------------ACDIPHCT 288
+ C + + +I DT+ CS ++ E + +P C
Sbjct: 1075 LEPCEDPGIPQYGSRIGFNFGIGDTLTFSCSSGYRLEGTSEIICLGGGRRVWSAPLPRCV 1134
Query: 289 DNCG 292
CG
Sbjct: 1135 AECG 1138
Score = 42.4 bits (98), Expect = 0.003
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 19/139 (13%)
Query: 113 PGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGFVTDG-PGNYKYKTKCTWLIEGQPNRIMR 171
P Q +CPA RL + ++ G P +Y C W I + +
Sbjct: 2345 PPVCQVLCPAN-----------ELRLDSTGVILSPGYPDSYPNLQMCAWSISVEKGYNIT 2393
Query: 172 LRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFF 231
+ F TE +D L VYDG +I +P++ + SG + + + L +
Sbjct: 2394 MFVEFFQTEKEFDVLQVYDGPNIQSPVLISLSG-------DYSSAFNITSNGHEVFLQWS 2446
Query: 232 SDAAYNLTGFNITYSFDMC 250
+D N GF I Y C
Sbjct: 2447 ADHGNNKKGFRIRYIAFYC 2465
Score = 31.2 bits (69), Expect = 7.5
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 105 CVNGGRCNPGTGQCVCPAG----WVGE--QC-QHCGGRFRLTGSSGFVTDG--PGNYKYK 155
C +G R GT + +C G W +C CG T + G + P NY+
Sbjct: 1104 CSSGYRLE-GTSEIICLGGGRRVWSAPLPRCVAECGAS--ATNNEGILLSPNYPLNYENN 1160
Query: 156 TKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNET 215
+C + I+ Q + + + F D L +YDG L+ AF+G +
Sbjct: 1161 HECIYSIQVQAGKGINISARTFHL-AQGDVLKIYDGKDKTTHLLGAFTG-------ASMR 1212
Query: 216 VPEVVATSGYALLHFFSDAAYNLTGFNITY-SFDMCPNNCSGRG 258
+ +TS L F SD GF + Y SF++ ++C G
Sbjct: 1213 GLTLSSTSNQLWLEFNSDTEGTDEGFQLVYTSFEL--SHCEDPG 1254
>gi|38045888 CUB and Sushi multiple domains 3 isoform 1 [Homo sapiens]
Length = 3707
Score = 67.8 bits (164), Expect = 7e-11
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG F PG YK C W+IE +P +++ F F TE ++D L V+DG
Sbjct: 895 CGGHFSAPSGVILSPGWPGYYKDSLNCEWVIEAEPGHSIKITFERFQTELNYDVLEVHDG 954
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
++ +PL+ +++G VP+ + ++S + L F +D + + GF I Y
Sbjct: 955 PNLLSPLLGSYNGTQVPQ--------FLFSSSNFIYLLFTTDNSRSNNGFKIHY 1000
Score = 67.8 bits (164), Expect = 7e-11
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG LTGSSGF+ P Y + C W I + ++ L F F+ E ++D LY+Y
Sbjct: 1588 CGGN--LTGSSGFILSPNFPHPYPHSRDCDWTITVNADYVISLAFISFSIEPNYDFLYIY 1645
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
DG +PL+ +F +PER + ++S L F SD + + TGF++ Y
Sbjct: 1646 DGPDSNSPLIGSFQDSKLPER--------IESSSNTMHLAFRSDGSVSYTGFHLEY 1693
Score = 60.8 bits (146), Expect = 9e-09
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 132 CGGRFRLTGSSGFVTDG-PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYD 190
CGGRF+ S ++ G P Y +C W+IE P I+ L+F F TE S D L V+D
Sbjct: 1414 CGGRFKGESSGRILSPGYPFPYDNNLRCMWMIEVDPGNIVSLQFLAFDTEASHDILRVWD 1473
Query: 191 GDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMC 250
G L+ SG ++PE + +T + F +D + +GF I +S +
Sbjct: 1474 GPPENDMLLKEISGSLIPE--------GIHSTLNIVTIQFDTDFYISKSGFAIQFSSSVA 1525
Query: 251 --------PNNCSGRGECKISNSSDTVECECSENWKGE 280
P N + G+ + + +C+ +GE
Sbjct: 1526 TACRDPGVPMNGTRNGDGREPGDTVVFQCDPGYELQGE 1563
Score = 58.5 bits (140), Expect = 4e-08
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 147 DGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLI 206
D P Y C W I P + L FN F E +D L V DGDS +P++ F+G
Sbjct: 736 DYPEGYGNNLNCIWTIISDPGSRIHLSFNDFDLESQFDFLAVKDGDSPESPILGTFTGAE 795
Query: 207 VPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGEC 260
VP + + S L F +D + + GFNITY N G EC
Sbjct: 796 VPS--------HLTSNSHILRLEFQADHSMSGRGFNITY-------NTFGHNEC 834
Score = 56.6 bits (135), Expect = 2e-07
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG R GSSG ++ P Y CTW I +P + L F F E +D+L +
Sbjct: 241 CGGTMR--GSSGIISSPSFPNEYHNNADCTWTIVAEPGDTISLIFTDFQMEEKYDYLEIE 298
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDM 249
+ P SG+ +P P +++ + LHF +D+ + GF+ Y
Sbjct: 299 GSE----PPTIWLSGMNIP--------PPIISNKNWLRLHFVTDSNHRYRGFSAPYQGSS 346
Query: 250 CPNNCSGRGECKISNSSDT 268
+ + GE + N + T
Sbjct: 347 TLTHTTSTGELEEHNRTTT 365
Score = 56.2 bits (134), Expect = 2e-07
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG + P Y C W I ++++ FATE +WD L YDG
Sbjct: 1939 CGGILTKRKGTILSPGYPEPYDNNLNCVWKITVPEGAGIQVQVVSFATEHNWDSLDFYDG 1998
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYS---FD 248
AP + ++SG +P + +TS L+F SD + + GF++ Y+ D
Sbjct: 1999 GDNNAPRLGSYSGTTIPHL--------LNSTSNNLYLNFQSDISVSAAGFHLEYTAIGLD 2050
Query: 249 MCPNNCSGRGECKISNS---SDTVECECSENW 277
CP + KI + D V +C + +
Sbjct: 2051 SCPEPQTPSSGIKIGDRYMVGDVVSFQCDQGY 2082
Score = 55.1 bits (131), Expect = 5e-07
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 39/187 (20%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG ++ SG + PGNY CTW I + L+F +F+TE D+L V
Sbjct: 2111 CGGA--MSDFSGVILSPGFPGNYPSSLDCTWTINLPIGFGVHLQFVNFSTETIHDYLEVR 2168
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNI---TYS 246
G S + ++ SG +P + +T+ L+F SD + N GF+I Y
Sbjct: 2169 SGSSETSTVIGRLSGPQIPS--------SLFSTTHETSLYFHSDYSQNKQGFHIVYQAYQ 2220
Query: 247 FDMCPNNCSGRGECKISNS---SDTVECEC------------------SENWKGEACDIP 285
CP+ R I N T+ EC S NW +P
Sbjct: 2221 LQSCPDPRPFRNGFVIGNDFTVGQTISFECFPGYTLIGNSALTCLHGVSRNWNH---PLP 2277
Query: 286 HCTDNCG 292
C CG
Sbjct: 2278 RCEALCG 2284
Score = 47.0 bits (110), Expect = 1e-04
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 15/130 (11%)
Query: 132 CGGRFRLTGSSGFVTDGPG---NYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYV 188
CGG L G +G + + PG Y CTW+I + +++ F FA E +D+L +
Sbjct: 65 CGGT--LKGLNGTI-ESPGFPYGYPNGANCTWVIIAEERNRIQIVFQSFALEEEYDYLSL 121
Query: 189 YDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFD 248
YDG +G +P P V +T L SD A + GF + Y +
Sbjct: 122 YDGHPHPTNFRTRLTGFHLP--------PPVTSTKSVFSLRLTSDFAVSAHGFKVYYE-E 172
Query: 249 MCPNNCSGRG 258
+ ++C G
Sbjct: 173 LQSSSCGNPG 182
Score = 47.0 bits (110), Expect = 1e-04
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG + + P Y C WL+ P + + F TE +D + V+DG
Sbjct: 2283 CGGNITAMNGTIYSPGYPDEYPNFQDCFWLVRVPPGNGIYINFTVLQTEPIYDFITVWDG 2342
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGF 241
+P + FS GN + V +TS L+ F SD + +GF
Sbjct: 2343 PDQNSPQIGQFS--------GNTALESVYSTSNQILIKFHSD--FTTSGF 2382
Score = 45.4 bits (106), Expect = 4e-04
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEG-QPNRIMRLRFNHFATECSWDHLYV 188
CG L G SG T P Y +C W+I N+++++ F F E +D L +
Sbjct: 548 CGSN--LQGPSGTFTSPNFPFQYDSNAQCVWVITAVNTNKVIQINFEEFDLEIGYDTLTI 605
Query: 189 YDGDSIYAP--LVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
DG + P ++ +G VP+ +V+ S LH +D + GF + Y
Sbjct: 606 GDGGEVGDPRTVLQVLTGSFVPDL--------IVSMSSQMWLHLQTDESVGSVGFKVNY 656
Score = 45.4 bits (106), Expect = 4e-04
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 31/184 (16%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVY 189
CGG R G SG + P Y CTW ++ + ++ F+ F E D+L +
Sbjct: 1067 CGGDVR--GPSGTILSPGYPEFYPNSLNCTWTVDVTHGKGVQFNFHTFHLEDHHDYLLIT 1124
Query: 190 DGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNIT---YS 246
+ S PL A +G +P T+ + + A L F SD + + GFNIT Y+
Sbjct: 1125 ENGSFTQPL-ARLTGSDLP-----PTINAGLYGNFRAQLRFISDFSISYEGFNITFSEYN 1178
Query: 247 FDMCPNNCSGRGECKIS---NSSDTVECECSENWKGE---------------ACDIPHCT 288
+ C + + +I DT+ CS ++ E + +P C
Sbjct: 1179 LEPCEDPGIPQYGSRIGFNFGIGDTLTFSCSSGYRLEGTSEIICLGGGRRVWSAPLPRCV 1238
Query: 289 DNCG 292
CG
Sbjct: 1239 AECG 1242
Score = 42.4 bits (98), Expect = 0.003
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 19/139 (13%)
Query: 113 PGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGFVTDG-PGNYKYKTKCTWLIEGQPNRIMR 171
P Q +CPA RL + ++ G P +Y C W I + +
Sbjct: 2449 PPVCQVLCPAN-----------ELRLDSTGVILSPGYPDSYPNLQMCAWSISVEKGYNIT 2497
Query: 172 LRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFF 231
+ F TE +D L VYDG +I +P++ + SG + + + L +
Sbjct: 2498 MFVEFFQTEKEFDVLQVYDGPNIQSPVLISLSG-------DYSSAFNITSNGHEVFLQWS 2550
Query: 232 SDAAYNLTGFNITYSFDMC 250
+D N GF I Y C
Sbjct: 2551 ADHGNNKKGFRIRYIAFYC 2569
Score = 31.2 bits (69), Expect = 7.5
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 23/164 (14%)
Query: 105 CVNGGRCNPGTGQCVCPAG----WVGE--QC-QHCGGRFRLTGSSGFVTDG--PGNYKYK 155
C +G R GT + +C G W +C CG T + G + P NY+
Sbjct: 1208 CSSGYRLE-GTSEIICLGGGRRVWSAPLPRCVAECGAS--ATNNEGILLSPNYPLNYENN 1264
Query: 156 TKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNET 215
+C + I+ Q + + + F D L +YDG L+ AF+G +
Sbjct: 1265 HECIYSIQVQAGKGINISARTFHL-AQGDVLKIYDGKDKTTHLLGAFTG-------ASMR 1316
Query: 216 VPEVVATSGYALLHFFSDAAYNLTGFNITY-SFDMCPNNCSGRG 258
+ +TS L F SD GF + Y SF++ ++C G
Sbjct: 1317 GLTLSSTSNQLWLEFNSDTEGTDEGFQLVYTSFEL--SHCEDPG 1358
>gi|16945972 kelch domain containing 3 [Homo sapiens]
Length = 382
Score = 67.8 bits (164), Expect = 7e-11
Identities = 58/262 (22%), Positives = 108/262 (41%), Gaps = 22/262 (8%)
Query: 384 RSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNELRVFHIHNESWVLLTPKAKEQYA 443
R VN+ V GH ++Y +GG T HI N + T + A
Sbjct: 13 RRVNHAAVAVGH-------RVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPPVKSA 65
Query: 444 VVGHSAHIVTLKNGRVVMLVIF------GHCPLYGYISNVQEYDLDKNTWSILHTQGALV 497
+ G + + ++ G +L+ G G + + +D++ + W G +
Sbjct: 66 IRGQAPVVPYMRYGHSTVLIDDTVLLWGGRNDTEGACNVLYAFDVNTHKWFTPRVSGTVP 125
Query: 498 QGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTIL---KDSRFFR 554
GHS+ + +Y+ GGY+ A+ + ++D+++ D T WT++ +R
Sbjct: 126 GARDGHSACV--LGKIMYIFGGYEQ-QADCF--SNDIHKLDTSTMTWTLICTKGSPARWR 180
Query: 555 YLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPDLHHDVNR 614
H+A ++ M VFGG + + + +D + W P + + R
Sbjct: 181 DFHSATMLGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPEGRR 240
Query: 615 FGHSAVLHNSTMYVFGGFNSLL 636
HSA +N +Y+FGG+N+ L
Sbjct: 241 -SHSAFGYNGELYIFGGYNARL 261
Score = 62.0 bits (149), Expect = 4e-09
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 32/253 (12%)
Query: 341 RASHKAVVNGNIMWVVGGYMFNHSDYNMVLAYDL-----ASREWL---PLNRSVNNVV-- 390
R +H AV G+ ++ GGY + DY + D+ S W P+ ++
Sbjct: 14 RVNHAAVAVGHRVYSFGGYC-SGEDYETLRQIDVHIFNAVSLRWTKLPPVKSAIRGQAPV 72
Query: 391 ---VRYGHSLALYKDKIYMYGGKIDSTGNVTNELRVFHIHNESWVLLTPKAKEQYAVVGH 447
+RYGHS L D + ++GG+ D+ G N L F ++ W A GH
Sbjct: 73 VPYMRYGHSTVLIDDTVLLWGGRNDTEG-ACNVLYAFDVNTHKWFTPRVSGTVPGARDGH 131
Query: 448 SAHIVTLKNGRVVMLVIFGHCPLYG--YISNVQEYDLDKNTWSILHTQGALVQGGYGHSS 505
SA ++ G++ + IFG + +++ + D TW+++ T+G+ + HS+
Sbjct: 132 SACVL----GKI--MYIFGGYEQQADCFSNDIHKLDTSTMTWTLICTKGSPARWRDFHSA 185
Query: 506 VYDHRTRALYVHGG----YKAFSANKYRLADDLYRYDVDTQMWTILKDSRFF---RYLHT 558
+YV GG + F +N + + +D T+ W + R H+
Sbjct: 186 TM--LGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPEGRRSHS 243
Query: 559 AVIVSGTMLVFGG 571
A +G + +FGG
Sbjct: 244 AFGYNGELYIFGG 256
Score = 47.0 bits (110), Expect = 1e-04
Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 21/244 (8%)
Query: 341 RASHKAVVNGNIMWVVGGYMFNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALY 400
R H V+ + + + GG N++ A+D+ + +W S R GHS +
Sbjct: 77 RYGHSTVLIDDTVLLWGGRNDTEGACNVLYAFDVNTHKWFTPRVSGTVPGARDGHSACVL 136
Query: 401 KDKIYMYGGKIDSTGNVTNELRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVV 460
+Y++GG +N++ +W L+ K HSA ++
Sbjct: 137 GKIMYIFGGYEQQADCFSNDIHKLDTSTMTWTLICTKGSPARWRDFHSATMLGSH----- 191
Query: 461 MLVIFGHCPLYG--------YISNVQEYDLDKNTWSILHTQGALVQGGYGHSSVYDHRTR 512
M V G +G Y + ++ +D W L +G HS+
Sbjct: 192 MYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPEGRRSHSAF--GYNG 249
Query: 513 ALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTILK---DSRFFRYLHTAVIVSGTMLVF 569
LY+ GGY +A R DL++++ + W ++ R IV +++F
Sbjct: 250 ELYIFGGY---NARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLF 306
Query: 570 GGNT 573
GG +
Sbjct: 307 GGTS 310
>gi|164414431 netrin G1 isoform 1 [Homo sapiens]
Length = 539
Score = 66.6 bits (161), Expect = 2e-10
Identities = 53/201 (26%), Positives = 79/201 (39%), Gaps = 34/201 (16%)
Query: 971 GQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQ 1030
G+C + C +N C C H P CG C + +Y+G P
Sbjct: 295 GRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKC------------KKNYQGRPWSP-- 340
Query: 1031 APTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHS-KC-----INQSICEKCENLT 1084
G++ P P ++ C+ S C+C GHS +C +N IC C++ T
Sbjct: 341 ---GSYLPIPKGTANTCIP------SISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNT 391
Query: 1085 TGKHCETCISGFYGDPT----NGGKCQPCKCNGHASLCNTNTGKCFCTTK-GVKGDECQL 1139
G+HCE C G++ + + + C C CN S+ + G FC K G G +C
Sbjct: 392 RGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDRCNGSGFCECKTGTTGPKCDE 451
Query: 1140 CEVENRYQGNPLRGTCYYTLL 1160
C N + C LL
Sbjct: 452 CLPGNSWHYGCQPNVCDNELL 472
>gi|110611156 laminin, gamma 3 precursor [Homo sapiens]
Length = 1575
Score = 66.6 bits (161), Expect = 2e-10
Identities = 58/205 (28%), Positives = 74/205 (36%), Gaps = 62/205 (30%)
Query: 981 TCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQP 1040
TC P +G C CSH E P C +C+ G Y P QA P P
Sbjct: 714 TCDPN--TGICVCSHHTEGPSCE-----------RCLPGFYGNP--FAGQADDCQPCPCP 758
Query: 1041 LLNSSMCLEDSRYNWSFIHCPA------------------------------CQCNGH-- 1068
++ + +SR HCP CQC+G+
Sbjct: 759 GQSACTTIPESR-EVVCTHCPPGQRGRRCEVCDDGFFGDPLGLFGHPQPCHQCQCSGNVD 817
Query: 1069 ----SKCINQS-ICEKCENLTTGKHCETCISGFYGD---PTNGGKCQPCKCNGHASL--- 1117
C S C +C + TTG HCE C GFYG P KC PC C+ S+
Sbjct: 818 PNAVGNCDPLSGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPADKCMPCSCHPQGSVSEQ 877
Query: 1118 --CNTNTGKCFCTTKGVKGDECQLC 1140
C+ TG+C C V +C C
Sbjct: 878 MPCDPVTGQCSCLPH-VTARDCSRC 901
Score = 65.9 bits (159), Expect = 3e-10
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 1057 FIHCPACQCNGHSKCI-NQSICEKCENLTTGKHCETCISGFYGDPTNG--GKCQPCKCNG 1113
+ C C CN H C N IC C + T G CE C+ GFYG+P G CQPC C G
Sbjct: 701 YASCVPCTCNQHGTCDPNTGICV-CSHHTEGPSCERCLPGFYGNPFAGQADDCQPCPCPG 759
Query: 1114 HASLCNT--NTGKCFCT--TKGVKGDECQLCEVENRYQGNPL 1151
S C T + + CT G +G C++C ++ + G+PL
Sbjct: 760 Q-SACTTIPESREVVCTHCPPGQRGRRCEVC--DDGFFGDPL 798
Score = 57.0 bits (136), Expect = 1e-07
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 1049 EDSRYNWS-FIHCPACQCNG----HSKCINQSICEKCENLTTGKHCETCISGFYGDPTNG 1103
+++ Y+W + C C C H +C + C C+ TG C+ C+ GF+ +
Sbjct: 368 QENFYHWDPRMPCQPCDCQSAGSLHLQCDDTGTCA-CKPTVTGWKCDRCLPGFHS--LSE 424
Query: 1104 GKCQPCKCNGHASL--CNTNTGKCFCTTKGVKGDECQLC 1140
G C+PC CN SL C+ +G+C C + V+G+ C C
Sbjct: 425 GGCRPCTCNPAGSLDTCDPRSGRCPC-KENVEGNLCDRC 462
Score = 53.5 bits (127), Expect = 1e-06
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 22/108 (20%)
Query: 1063 CQCNGH-SKC----INQSICEKCENLTTGKHCETCISGFYGDPTNGG------KCQPCKC 1111
C+CNGH S+C Q C +C++ TTG CE C+ F P G +C PC C
Sbjct: 271 CKCNGHASECGPDVAGQLAC-RCQHNTTGTDCERCLPFFQDRPWARGTAEAAHECLPCNC 329
Query: 1112 NGHASLCNTNT---------GKCFCTTKGVKGDECQLCEVENRYQGNP 1150
+G + C + G+C G C+ C+ EN Y +P
Sbjct: 330 SGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQ-ENFYHWDP 376
Score = 50.4 bits (119), Expect = 1e-05
Identities = 35/95 (36%), Positives = 41/95 (43%), Gaps = 20/95 (21%)
Query: 1060 CPACQCNGHSK-CI----------NQSICEKCENLTTGKHCETCISGFY-GDPTNGGKCQ 1107
C C C+G S+ C + C C + T G HCE C FY DP CQ
Sbjct: 324 CLPCNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENFYHWDPRM--PCQ 381
Query: 1108 PCKCNGHASL---CNTNTGKCFC--TTKGVKGDEC 1137
PC C SL C+ +TG C C T G K D C
Sbjct: 382 PCDCQSAGSLHLQCD-DTGTCACKPTVTGWKCDRC 415
Score = 42.0 bits (97), Expect = 0.004
Identities = 51/189 (26%), Positives = 74/189 (39%), Gaps = 39/189 (20%)
Query: 979 MSTCPPENCSGYCT----------CSHCLEQ-PGCGWCTDPSNTGKGKCIEGSY--KGPV 1025
+ C P SG+C C HC E G P++ KC+ S +G V
Sbjct: 821 VGNCDP--LSGHCLRCLHNTTGDHCEHCQEGFYGSALAPRPAD----KCMPCSCHPQGSV 874
Query: 1026 --KMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIH------CPACQCNG----HSKCIN 1073
+MP TG P + + C SR F C +C+C+ +C
Sbjct: 875 SEQMPCDPVTGQCSCLPHVTARDC---SRCYPGFFDLQPGRGCRSCKCHPLGSQEDQCHP 931
Query: 1074 QSICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCN--GHASLCNTNTGKCFCTTKG 1131
++ C TG+ C+ C GF+G G C+ C+C+ G AS G C C G
Sbjct: 932 KTGQCTCRPGVTGQACDRCQLGFFGFSIKG--CRACRCSPLGAASAQCHENGTCVC-RPG 988
Query: 1132 VKGDECQLC 1140
+G +C C
Sbjct: 989 FEGYKCDRC 997
Score = 39.7 bits (91), Expect = 0.021
Identities = 52/222 (23%), Positives = 69/222 (31%), Gaps = 54/222 (24%)
Query: 939 CGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMST-----CPPENCSGY--- 990
CG +G C C + D + PF Q W + C P NCSG
Sbjct: 280 CGPDVAGQLACR-CQHNTTGTDCERCL---PFFQDRPWARGTAEAAHECLPCNCSGRSEE 335
Query: 991 CT--------------CSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQA----- 1031
CT C HC + C +C E Y +MP Q
Sbjct: 336 CTFDRELFRSTGHGGRCHHCRDHTAGPHCE--------RCQENFYHWDPRMPCQPCDCQS 387
Query: 1032 ---------PTGNFYPQPLLNSSMCLE--DSRYNWSFIHCPACQCNGHSK---CINQSIC 1077
TG +P + C ++ S C C CN C +S
Sbjct: 388 AGSLHLQCDDTGTCACKPTVTGWKCDRCLPGFHSLSEGGCRPCTCNPAGSLDTCDPRSGR 447
Query: 1078 EKCENLTTGKHCETCISGFYG-DPTNGGKCQPCKCNGHASLC 1118
C+ G C+ C G + P N C C C GH+ +C
Sbjct: 448 CPCKENVEGNLCDRCRPGTFNLQPHNPAGCSSCFCYGHSKVC 489
Score = 35.4 bits (80), Expect = 0.40
Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 16/112 (14%)
Query: 637 LSDILVFTSEQCDAHRSEAACLAAGP-GIRCVWNTGSSQCIS---------WALATDEQ- 685
+SD V +C+ H SE AG RC NT + C WA T E
Sbjct: 262 VSDFSVGGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAA 321
Query: 686 EEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDCHWCNDHCV-PRNHSCSE 736
E L C + + C + + T + CH C DH P C E
Sbjct: 322 HECLPCNCSGRS----EECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQE 369
Score = 33.5 bits (75), Expect = 1.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 110 RCNPGTGQCVCPAGWVGEQCQHC 132
+C+P TGQC C G G+ C C
Sbjct: 928 QCHPKTGQCTCRPGVTGQACDRC 950
Score = 32.3 bits (72), Expect = 3.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 105 CVNGGRCNPGTGQCVCPAGWVGEQCQHC 132
C G C+P TG CVC G C+ C
Sbjct: 709 CNQHGTCDPNTGICVCSHHTEGPSCERC 736
>gi|126091152 cubilin [Homo sapiens]
Length = 3623
Score = 66.2 bits (160), Expect = 2e-10
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 100 EC-DRPCVNGGRCNPGTGQ--CVCPAGWVGEQCQH----CGGRFR-LTGSSGFVTDGPGN 151
EC PC+NGG C G C C W G CQ CG + GS + + G
Sbjct: 435 ECLSNPCLNGGTCVDGVDSFSCECTRLWTGALCQVPQQVCGESLSGINGSFSYRSPDVG- 493
Query: 152 YKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLYVYDGDSIYAPLVAAFSGLIV 207
Y + C W+I+ + +++R+ F F E C + L VYDGDS A + F G +
Sbjct: 494 YVHDVNCFWVIKTEMGKVLRITFTFFRLESMDNCPHEFLQVYDGDSSSAFQLGRFCGSSL 553
Query: 208 PERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
P E++++ H +S+ N GF + +
Sbjct: 554 PH--------ELLSSDNALYFHLYSEHLRNGRGFTVRW 583
Score = 65.5 bits (158), Expect = 4e-10
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Query: 130 QHCGGRFRLTGSSGFV----TDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----- 180
Q CGG LTGS+ +D G Y C W+I N+++ L FN FA E
Sbjct: 3155 QGCGGY--LTGSNNTFASPDSDSNGMYDKNLNCVWIIIAPVNKVIHLTFNTFALEAASTR 3212
Query: 181 --CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNL 238
C +D++ +YDGDS A L F G VP +++ + + F SD
Sbjct: 3213 QRCLYDYVKLYDGDSENANLAGTFCGSTVP--------APFISSGNFLTVQFISDLTLER 3264
Query: 239 TGFNITYSFDMCPNNCSG 256
GFN TY+ P C G
Sbjct: 3265 EGFNATYTIMDMP--CGG 3280
Score = 57.4 bits (137), Expect = 1e-07
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 128 QCQHCGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----C 181
Q CGG LTG G + PGNY C W++ P+ ++ F + E C
Sbjct: 586 QQPECGGI--LTGPYGSIKSPGYPGNYPPGRDCVWIVVTSPDLLVTFTFGTLSLEHHDDC 643
Query: 182 SWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGF 241
+ D+L + DG PL+ F +VP + T +A +HF SD+ + GF
Sbjct: 644 NKDYLEIRDGPLYQDPLLGKFCTTF--------SVPPLQTTGPFARIHFHSDSQISDQGF 695
Query: 242 NITYSFDMCPNNCSG 256
+ITY C G
Sbjct: 696 HITYLTSPSDLRCGG 710
Score = 51.2 bits (121), Expect = 7e-06
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 130 QHCGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQP--NRIMRLRFNHF----ATEC 181
Q CGG LT S V+ P NY C+W+I+ QP N I L F HF +T C
Sbjct: 1618 QACGGHI-LTSSFDTVSSPRFPANYPNNQNCSWIIQAQPPLNHI-TLSFTHFELERSTTC 1675
Query: 182 SWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGF 241
+ D + + DG APL + G +P + + S L F SD++ + GF
Sbjct: 1676 ARDFVEILDGGHEDAPLRGRYCGTDMPH--------PITSFSSALTLRFVSDSSISAGGF 1727
Query: 242 NIT 244
+ T
Sbjct: 1728 HTT 1730
Score = 49.7 bits (117), Expect = 2e-05
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 132 CGGRFRLTGSSGFVTDGP---GNYKYKTKCTWLIEGQPNRIMRLRFNHF----ATECSWD 184
CGG F SSG +T +Y C + I ++++ L+F+ F +T CS D
Sbjct: 3037 CGGVFNF--SSGIITSPAYSYADYPNDMHCLYTITVSDDKVIELKFSDFDVVPSTSCSHD 3094
Query: 185 HLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNIT 244
+L +YDG + PL+ F G++ P V +++ LL F +D+ G+ ++
Sbjct: 3095 YLAIYDGANTSDPLLGKFC--------GSKRPPNVKSSNNSMLLVFKTDSFQTAKGWKMS 3146
Query: 245 YSFDMCP-NNCSG 256
+ + P C G
Sbjct: 3147 FRQTLGPQQGCGG 3159
Score = 48.5 bits (114), Expect = 5e-05
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 132 CGGRFRLTGSSGFVTDGPG---NYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWD 184
CGG R TG + PG +Y + CTWLI+ P+ + L E C++D
Sbjct: 1978 CGGFLR-TGDAPVFLFSPGWPDSYSNRVDCTWLIQA-PDSTVELNILSLDIESHRTCAYD 2035
Query: 185 HLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNIT 244
L + DGD+ A +A G +P + +T Y + F SD++ GFN +
Sbjct: 2036 SLVIRDGDNNLAQQLAVLCGREIP--------GPIRSTGEYMFIRFTSDSSVTRAGFNAS 2087
Query: 245 Y 245
+
Sbjct: 2088 F 2088
Score = 48.1 bits (113), Expect = 6e-05
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 132 CGGRFRLTGSSG-FVTDG-PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDH 185
CGG L+G++G F + G P Y +C W I P ++L + F E C++D
Sbjct: 1391 CGGE--LSGATGSFSSPGFPNRYPPNKECIWYIRTDPGSSIQLTIHDFDVEYHSRCNFDV 1448
Query: 186 LYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYAL-LHFFSDAAYNLTGFNIT 244
L +Y G ++P +A PE P V+++G L + F +D + N GFN
Sbjct: 1449 LEIYGGPDFHSPRIAQLCTQRSPEN------PMQVSSTGNELAIRFKTDLSINGRGFNA- 1501
Query: 245 YSFDMCPNNCSG 256
S+ C G
Sbjct: 1502 -SWQAVTGGCGG 1512
Score = 47.0 bits (110), Expect = 1e-04
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 15/120 (12%)
Query: 132 CGGRFRLTGSSG-FVTDG-PGNYKYKTKCTWLIEGQPNRIMRLRFNHFAT----ECSWDH 185
CGG L G G F + G PG Y T C W++ R++ + F + +C ++
Sbjct: 3511 CGGT--LYGDRGSFTSPGYPGTYPNNTYCEWVLVAPAGRLVTINFYFISIDDPGDCVQNY 3568
Query: 186 LYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
L +YDG + +P + G G+ ++ VA+S + F +D A + F +T+
Sbjct: 3569 LTLYDGPNASSPSSGPYCG-------GDTSIAPFVASSNQVFIKFHADYARRPSAFRLTW 3621
Score = 46.2 bits (108), Expect = 2e-04
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 138 LTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDHLYVYDG 191
LT S+G + P Y + CTW I QPN ++ L F F E C+ D+L VYD
Sbjct: 936 LTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYLEVYDT 995
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
DS + + G +P P + ++ +L F +D+ GF I Y
Sbjct: 996 DS--ETSLGRYCGKSIP--------PSLTSSGNSLMLVFVTDSDLAYEGFLINY 1039
Score = 46.2 bits (108), Expect = 2e-04
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 19/136 (13%)
Query: 132 CGGRFRL--TGSSGFVT--DGPGNYKYKTKCTWLIEGQPNRIMRLRFN-----HFATECS 182
CGG + S+G+VT + P NY C W++ P ++L+F C+
Sbjct: 2217 CGGNVYIHDADSAGYVTSPNHPHNYPPHADCIWILAAPPETRIQLQFEDRFDIEVTPNCT 2276
Query: 183 WDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYAL-LHFFSDAAYNLTGF 241
++L + DG AP+++ F G +P +SG + L F SD + GF
Sbjct: 2277 SNYLELRDGVDSDAPILSKFCGTSLPSSQW---------SSGEVMYLRFRSDNSPTHVGF 2327
Query: 242 NITYSFDMCPNNCSGR 257
YS C G+
Sbjct: 2328 KAKYSIAQCGGRVPGQ 2343
Score = 44.7 bits (104), Expect = 7e-04
Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 36/180 (20%)
Query: 96 AEAKECDRPCVNGGRCNPGTGQCVCPA---------------GWVGEQCQHCGGRFRLTG 140
A +E D+ + G N G + P+ G+ CG F TG
Sbjct: 2869 AGTEEVDKALLATGCGNVAPGPVITPSNTFTAVFQSQEAPAQGFSASFVSRCGSNF--TG 2926
Query: 141 SSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE--------CSWDHLYVYD 190
SG++ P Y CT++IE P ++ L F F E C D +++
Sbjct: 2927 PSGYIISPNYPKQYDNNMNCTYVIEANPLSVVLLTFVSFHLEARSAVTGSCVNDGVHIIR 2986
Query: 191 GDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMC 250
G S+ + A G + +P + +G LL+F+S+ GF +Y C
Sbjct: 2987 GYSVMSTPFATVCG---------DEMPAPLTIAGPVLLNFYSNEQITDFGFKFSYRIISC 3037
Score = 42.0 bits (97), Expect = 0.004
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 10/112 (8%)
Query: 216 VPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNN-CSGRGECKISNSSDTVECECS 274
+P+ +++ Y L D G T +C +N C G C N D+ C C
Sbjct: 102 LPQNISSQIYQLNSKLVDLERKFQGLQQTVDKKVCSSNPCQNGGTCL--NLHDSFFCICP 159
Query: 275 ENWKGEAC--DIPHCTDNCGFP----HRGIC-NSSDVRGCSCFSDWQGPGCS 319
WKG C D+ C G P + G C N+ C C + GP C+
Sbjct: 160 PQWKGPLCSADVNECEIYSGTPLSCQNGGTCVNTMGSYSCHCPPETYGPQCA 211
Score = 41.6 bits (96), Expect = 0.006
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Query: 132 CGGRFRLTGSSGFVTDG--PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDH 185
CGG G SG +T P Y T C+ L+E + L F+ F E C+WD
Sbjct: 2689 CGGI--QIGDSGVITSPNYPNAYDSLTHCSSLLEAPQGHTITLTFSDFDIEPHTTCAWDS 2746
Query: 186 LYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITY 245
+ V +G S +P++ + GN + + S ++ F SD + GF T+
Sbjct: 2747 VTVRNGGSPESPIIGQYC--------GNSNPRTIQSGSNQLVVTFNSDHSLQGGGFYATW 2798
Query: 246 S 246
+
Sbjct: 2799 N 2799
Score = 40.0 bits (92), Expect = 0.016
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 132 CGGRFRLTGSSG-FVTDG-PGNYKYKTKCTWLIEGQPNRIMRLRFNHFATE----CSWDH 185
CGG LT SSG F++ P Y + ++C W ++ L F F E C+ D+
Sbjct: 1165 CGGN--LTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDY 1222
Query: 186 LYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYAL-LHFFSDAAYNLTGFNIT 244
L VYDG S + L+ G + P ++ +SG ++ + +D GF
Sbjct: 1223 LAVYDGPSSNSHLLTQLCG---------DEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAE 1273
Query: 245 Y 245
Y
Sbjct: 1274 Y 1274
Score = 40.0 bits (92), Expect = 0.016
Identities = 38/138 (27%), Positives = 53/138 (38%), Gaps = 17/138 (12%)
Query: 122 AGWVGEQCQHCGGRFRLTGSSGFVT---DGPGNYKYKTKCTWLIEG--QPNRIMRLRFNH 176
A + + CGG T F + DG NY C W + Q N + + F
Sbjct: 2560 ASYTSSEDAVCGGSLPNTPEGNFTSPGYDGVRNYSRNLNCEWTLSNPNQGNSSISIHFED 2619
Query: 177 FATE----CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFS 232
F E C +D L GD+ PL+ G P T+P V+ S +HF +
Sbjct: 2620 FYLESHQDCQFDVLEFRVGDAD-GPLMWRLCGPSKP------TLPLVIPYS-QVWIHFVT 2671
Query: 233 DAAYNLTGFNITYSFDMC 250
+ GF+ YSF C
Sbjct: 2672 NERVEHIGFHAKYSFTDC 2689
Score = 39.3 bits (90), Expect = 0.027
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 132 CGGRFRLTGSSGFVTD-GPGNYKYKTK--CTWLIEGQPNRIMRLRFNHF----ATECSWD 184
CGGR + G SG V G Y+ C W ++G + + F F ++ C D
Sbjct: 2336 CGGR--VPGQSGVVESIGHPTLPYRDNLFCEWHLQGLSGHYLTISFEDFNLQNSSGCEKD 2393
Query: 185 HLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGY-ALLHFFSDAAYNLTGFNI 243
+ ++D + SG I+ GN T+P+ + TS A++ F +D + +GF +
Sbjct: 2394 FVEIWDNHT---------SGNILGRYCGN-TIPDSIDTSSNTAVVRFVTDGSVTASGFRL 2443
Query: 244 TYSFDMCPNNCSG 256
+ M C G
Sbjct: 2444 RFESSM--EECGG 2454
Score = 38.1 bits (87), Expect = 0.061
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 230 FFSDAAYNLTGFNITYSFDMCPNN-CSGRGECKISNSSDTVECECSENWKGEACDIPHCT 288
+F TG N T + + C +N C G C + D+ CEC+ W G C +P
Sbjct: 416 YFCKCDSGWTGVNCTENINECLSNPCLNGGTCV--DGVDSFSCECTRLWTGALCQVPQ-- 471
Query: 289 DNCGFPHRGICNSSDVR 305
CG GI S R
Sbjct: 472 QVCGESLSGINGSFSYR 488
Score = 37.7 bits (86), Expect = 0.080
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 149 PGNYKYKTKCTWLIEGQPNRIMRLRFNHF----ATECSWDHLYVYDGDSIYAPLVAAFSG 204
P NY CT + N + L F+ + EC D L V +G + +PL+ + G
Sbjct: 3412 PDNYDNDKDCTVTLTAPQNHTISLFFHSLGIENSVECRNDFLEVRNGSNSNSPLLGKYCG 3471
Query: 205 LIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSG 256
++P V + + L F SD+ + G+ I ++ P+ C G
Sbjct: 3472 TLLPN--------PVFSQNNELYLRFKSDSVTSDRGYEIIWT--SSPSGCGG 3513
Score = 37.0 bits (84), Expect = 0.14
Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 17/131 (12%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATEC----SWDHLY 187
CGG + F+ + G + + +C ++++ +++ F H +C S +++
Sbjct: 708 CGGNYTDPEGELFLPELSGPFTHTRQCVYMMKQPQGEQIQINFTHVELQCQSDSSQNYIE 767
Query: 188 VYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSF 247
V DG+++ + GN T+ + + + + F DA+ F Y
Sbjct: 768 VRDGETLLGKVC------------GNGTISHIKSITNSVWIRFKIDASVEKASFRAVYQV 815
Query: 248 DMCPNNCSGRG 258
C + +G G
Sbjct: 816 -ACGDELTGEG 825
Score = 36.6 bits (83), Expect = 0.18
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 9/115 (7%)
Query: 132 CGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDG 191
CGG F+ + P Y+ T C+W+I N + L F F E + YDG
Sbjct: 1510 CGGIFQAPSGEIHSPNYPSPYRSNTDCSWVIRVDRNHRVLLNFTDFDLEPQDSCIMAYDG 1569
Query: 192 DSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYAL-LHFFSDAAYNLTGFNITY 245
L + S L G E + + +SG +L L F S + GF +
Sbjct: 1570 ------LSSTMSRL--ARTCGREQLANPIVSSGNSLFLRFQSGPSRQNRGFRAQF 1616
Score = 32.3 bits (72), Expect = 3.4
Identities = 20/67 (29%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Query: 260 CKISNSSDTVE---CECSENWKGEAC--DIPHCTDNCGFPHRGICNSSDVRGCSCFSDWQ 314
C DTV C+C W G C +I C N + D C C W
Sbjct: 404 CLNGQCIDTVSGYFCKCDSGWTGVNCTENINECLSNPCLNGGTCVDGVDSFSCECTRLWT 463
Query: 315 GPGCSVP 321
G C VP
Sbjct: 464 GALCQVP 470
>gi|50659100 regeneration associated muscle protease isoform b [Homo
sapiens]
Length = 720
Score = 66.2 bits (160), Expect = 2e-10
Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 19/181 (10%)
Query: 120 CPAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFAT 179
C AGW G C CG R + +Y C W I +P +++LRF +
Sbjct: 116 CRAGWYGGDCMRCGQVLRAPKGQILLE----SYPLNAHCEWTIHAKPGFVIQLRFVMLSL 171
Query: 180 E----CSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAA 235
E C +D++ V DGD+ G I+ GNE + + + F SD +
Sbjct: 172 EFDYMCQYDYVEVRDGDN--------RDGQIIKRVCGNERPAPIQSIGSSLHVLFHSDGS 223
Query: 236 YNLTGFNITY-SFDMCPNN-CSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGF 293
N GF+ Y C ++ C G C + + + + +C C + G+ C+ NC
Sbjct: 224 KNFDGFHAIYEEITACSSSPCFHDGTC-VLDKAGSYKCACLAGYTGQRCENLLEERNCSD 282
Query: 294 P 294
P
Sbjct: 283 P 283
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 65.1 bits (157), Expect = 5e-10
Identities = 34/88 (38%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 1059 HCPACQCNGHSKCINQSI--CEKCENLTTGKHCETCISGFYGDPTNG--GKCQPCKCNGH 1114
HC C+CNGHS + C +C++ G+ CE C G+YGD T G CQPC C
Sbjct: 1559 HCELCECNGHSDLCHPETGACSQCQHNAAGEFCELCAPGYYGDATAGTPEDCQPCAC--- 1615
Query: 1115 ASLCN-TNTGKCFCTTKGVKGDECQLCE 1141
L N N C + G G C CE
Sbjct: 1616 -PLTNPENMFSRTCESLGAGGYRCTACE 1642
Score = 59.7 bits (143), Expect = 2e-08
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 1060 CPACQCNGHSKCINQSI--CEKCENLTTGKHCETCISGFYGDPTNG--GKCQPCKCNGH- 1114
C C C+GHS+ C+ C++ T G CE C G+YGD G CQ C C G
Sbjct: 1156 CERCSCHGHSEACEPETGACQGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGDP 1215
Query: 1115 -----ASLCNTNTG---KCFCTTKGVKGDECQLCEVENRYQGNPLRG 1153
A C +T C + G G C+ C Y GNP +G
Sbjct: 1216 AAGQAAHTCFLDTDGHPTCDACSPGHSGRHCERC--APGYYGNPSQG 1260
Score = 50.8 bits (120), Expect = 9e-06
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 1079 KCENLTTGKHCETCISGFY--GDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDE 1136
+C G C+ C G+ G G C+ C+CNGH+ LC+ TG C G+
Sbjct: 1531 RCPPGYIGLSCQDCAPGYTRTGSGLYLGHCELCECNGHSDLCHPETGACSQCQHNAAGEF 1590
Query: 1137 CQLCEVENRYQGNPLRGT 1154
C+LC Y G+ GT
Sbjct: 1591 CELC--APGYYGDATAGT 1606
Score = 50.1 bits (118), Expect = 2e-05
Identities = 58/227 (25%), Positives = 89/227 (39%), Gaps = 56/227 (24%)
Query: 924 HSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMSTCP 983
HS ++CR P SG S C +A+ P G + TC
Sbjct: 726 HSVEECRCPIGY--------SGLS----------CESCDAHFTRVPGGPYL-----GTCS 762
Query: 984 PENCSGYCTCSHCLEQPGCGWCTDPSNTGKG----KCIEGSYKGPVKMPSQAPTGNFYPQ 1039
NC+G+ S C P G C + + +G KC G + +K + A + P
Sbjct: 763 GCNCNGHA--SSC--DPVYGHCLNCQHNTEGPQCNKCKAGFFGDAMK--ATATSCRPCPC 816
Query: 1040 PLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHCETCISGFYGD 1099
P +++S D+ + +G Q+ C+ C TG+ CE+C G+ G+
Sbjct: 817 PYIDASRRFSDTCF---------LDTDG------QATCDACAPGYTGRRCESCAPGYEGN 861
Query: 1100 PTN-GGKCQP-----CKCNGHASLCNTNTGKCFCTTKGVKGDECQLC 1140
P GGKC+P +C+ S+ T+ C C V G C C
Sbjct: 862 PIQPGGKCRPVNQEIVRCDERGSM-GTSGEACRC-KNNVVGRLCNEC 906
Score = 49.3 bits (116), Expect = 3e-05
Identities = 56/230 (24%), Positives = 76/230 (33%), Gaps = 62/230 (26%)
Query: 927 KQCRTPCALR-TACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMSTCPPE 985
+QC P R +C DC +G + S Y+ + +C C PE
Sbjct: 1124 EQCSCPPGYRGPSCQDCDTGYTR----------TPSGLYLGTCE--RCSCHGHSEACEPE 1171
Query: 986 N--CSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKM--PSQAPTGNFYPQPL 1041
C G C H E P C C + Y G + P Y P
Sbjct: 1172 TGACQG---CQHHTEGPRCEQC------------QPGYYGDAQRGTPQDCQLCPCYGDPA 1216
Query: 1042 LNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHCETCISGFYGDPT 1101
+ H +GH C + C +G+HCE C G+YG+P+
Sbjct: 1217 AGQAA------------HTCFLDTDGHPTC------DACSPGHSGRHCERCAPGYYGNPS 1258
Query: 1102 NGGKCQ-------PCKCN----GHASLCNTNTGKCFCTTKGVKGDECQLC 1140
G CQ P CN G S G+C C + V+G C C
Sbjct: 1259 QGQPCQRDSQVPGPIGCNCDPQGSVSSQCDAAGQCQCKAQ-VEGLTCSHC 1307
Score = 48.5 bits (114), Expect = 5e-05
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 1086 GKHCETCISGFYGDPTNG--GKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVE 1143
G C+ C +G+ P+ G C+ C C+GH+ C TG C +G C+ C +
Sbjct: 1134 GPSCQDCDTGYTRTPSGLYLGTCERCSCHGHSEACEPETGACQGCQHHTEGPRCEQC--Q 1191
Query: 1144 NRYQGNPLRGT 1154
Y G+ RGT
Sbjct: 1192 PGYYGDAQRGT 1202
Score = 45.8 bits (107), Expect = 3e-04
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 1079 KCENLTTGKHCETCISGFYGDPTNG--GKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDE 1136
+C +G CE+C + F P G C C CNGHAS C+ G C +G +
Sbjct: 732 RCPIGYSGLSCESCDAHFTRVPGGPYLGTCSGCNCNGHASSCDPVYGHCLNCQHNTEGPQ 791
Query: 1137 CQLCE 1141
C C+
Sbjct: 792 CNKCK 796
Score = 44.7 bits (104), Expect = 7e-04
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Query: 102 DRPCVNGGRCNPGTGQ---CVCPAGWVGEQCQH 131
DRPC NGG+C+ CVCPAG+ G +C+H
Sbjct: 3850 DRPCQNGGQCHDSESSSYVCVCPAGFTGSRCEH 3882
Score = 37.4 bits (85), Expect = 0.10
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Query: 104 PCVNGGRCNPGTGQCVCPAGWVGEQCQHCGGR------FRLTGSSGFVTDGPGNY 152
PC++GG C GT +C+C G+ G +CQ G + L GS G D PG Y
Sbjct: 4152 PCLHGGTCQ-GT-RCLCLPGFSGPRCQQGSGHGIAESDWHLEGSGG--NDAPGQY 4202
Score = 36.2 bits (82), Expect = 0.23
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 1077 CEKCENLTTGKHCETCISGFYGDPT-NGGKCQP 1108
C CE TG++CE C G+ G+P+ GG+C P
Sbjct: 1638 CTACEPGYTGQYCEQCGPGYVGNPSVQGGQCLP 1670
Score = 34.3 bits (77), Expect = 0.88
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 237 NLTGFNITYSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACD---IPHCTDNCGF 293
NLT I++ C G+C S SS V C C + G C+ HC
Sbjct: 3836 NLTAHGISHCPTCRDRPCQNGGQCHDSESSSYV-CVCPAGFTGSRCEHSQALHCHPEACG 3894
Query: 294 PHRGICNSSDVRGCSC 309
P N D RG +C
Sbjct: 3895 PDATCVNRPDGRGYTC 3910
Score = 33.1 bits (74), Expect = 2.0
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 55 PPLRPRLLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPG 114
P R LL+ L L L+ A ++ ++ S +A + E +P +
Sbjct: 1475 PATREHLLMALADLDELLI--------RATFSSVPLAASISAVSLEVAQPGPSNRPRALE 1526
Query: 115 TGQCVCPAGWVGEQCQHCGGRFRLTGS 141
+C CP G++G CQ C + TGS
Sbjct: 1527 VEECRCPPGYIGLSCQDCAPGYTRTGS 1553
Score = 32.3 bits (72), Expect = 3.4
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 97 EAKECDR-PCVNGGRCNPGTG---QCVCPAGWVGEQCQH 131
++ C+R PC +G C P QC+C G+ G+ C+H
Sbjct: 4104 DSSPCERQPCQHGATCMPAGEYEFQCLCRDGFKGDLCEH 4142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,541,542
Number of Sequences: 37866
Number of extensions: 3240867
Number of successful extensions: 13266
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 372
Number of HSP's that attempted gapping in prelim test: 9120
Number of HSP's gapped (non-prelim): 3446
length of query: 1429
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1314
effective length of database: 13,892,928
effective search space: 18255307392
effective search space used: 18255307392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.