Guide to the Human Genome
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Name: KLHDC3 Sequence: fasta or formatted (382aa) NCBI GI: 16945972
Description:

kelch domain containing 3

Referenced in:

Kelch Family
Spindle, M phase, and Meiosis
Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         19           2
 C cysteine            3.4         13           3
 D aspartate           6.0         23           2
 E glutamate           3.7         14           2
 F phenylalanine       5.0         19           1
 G glycine             9.2         35           2
 H histidine           4.7         18           1
 I isoleucine          5.2         20           1
 K lysine              3.7         14           2
 L leucine             7.6         29           2
 M methionine          1.8          7           1
 N asparagine          4.5         17           2
 P proline             5.8         22           2
 Q glutamine           1.8          7           2
 R arginine            7.1         27           3
 S serine              6.8         26           2
 T threonine           6.0         23           2
 V valine              6.5         25           2
 W tryptophan          2.6         10           1
 Y tyrosine            3.7         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kelch domain containing 3 
HCFC2                 0.112   host cell factor C2 
HCFC1                 0.112   host cell factor 1 
KLHDC10               0.075   kelch domain containing 10 
KLHDC2                0.074   kelch domain containing 2 
ATRNL1                0.069   attractin-like 1 
RABEPK                0.069   Rab9 effector protein with kelch motifs 
KLHDC1                0.061   kelch domain containing 1 
LZTR1                 0.061   leucine-zipper-like transcription regulator 1 
KLHDC4                0.056   kelch domain containing 4 
ATRN                  0.054   attractin isoform 2 
ATRN                  0.054   attractin isoform 1 
FBXO42                0.053   F-box protein 42 
KLHL4                 0.046   kelch-like 4 isoform 2 
KLHL4                 0.046   kelch-like 4 isoform 1 
KLHL23                0.041   kelch-like 23 
MEGF8                 0.039   multiple EGF-like-domains 8 
KLHL10                0.038   kelch-like 10 
KLHL33                0.036   kelch-like 33 
KLHL36                0.036   kelch-like 36 
KLHL9                 0.036   kelch-like 9 
KLHL25                0.034   BTB/POZ KELCH domain protein 
KLHL3                 0.034   kelch-like 3 
KLHL13                0.033   kelch-like 13 
KLHL2                 0.033   kelch-like 2, Mayven isoform 3 
KLHL2                 0.033   kelch-like 2, Mayven isoform 2 
KLHL2                 0.033   kelch-like 2, Mayven isoform 1 
KLHL12                0.031   kelch-like 12 
KLHL34                0.031   kelch-like 34 
KLHL17                0.029   kelch-like 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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