Guide to the Human Genome
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Name: MYO6 Sequence: fasta or formatted (1285aa) NCBI GI: 92859701
Description:

myosin VI

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         85           3
 C cysteine            1.9         24           1
 D aspartate           5.8         74           2
 E glutamate           9.1        117           4
 F phenylalanine       4.4         57           2
 G glycine             4.7         61           2
 H histidine           2.3         30           2
 I isoleucine          5.4         70           2
 K lysine              9.4        121           3
 L leucine             9.3        120           3
 M methionine          2.6         33           2
 N asparagine          4.7         61           3
 P proline             3.4         44           2
 Q glutamine           5.1         66           3
 R arginine            6.8         88           3
 S serine              5.8         74           2
 T threonine           4.0         52           2
 V valine              4.6         59           2
 W tryptophan          0.9         11           2
 Y tyrosine            3.0         38           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin VI 
MYO10                 0.193   myosin X 
MYO5B                 0.185   myosin VB 
MYO5A                 0.184   myosin VA isoform 2 
MYO5A                 0.184   myosin VA isoform 1 
MYH9                  0.184   myosin, heavy polypeptide 9, non-muscle 
MYH10                 0.182   myosin, heavy polypeptide 10, non-muscle 
MYO5C                 0.180   myosin VC 
MYH11                 0.178   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.178   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH11                 0.177   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.177   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYO7A                 0.175   myosin VIIA isoform 2 
MYO7A                 0.175   myosin VIIA isoform 3 
MYO7A                 0.175   myosin VIIA isoform 1 
MYH8                  0.169   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH14                 0.168   myosin, heavy chain 14 isoform 2 
MYH3                  0.168   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH2                  0.168   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.168   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH14                 0.168   myosin, heavy chain 14 isoform 1 
MYH1                  0.166   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH4                  0.166   myosin, heavy polypeptide 4, skeletal muscle 
MYH7                  0.164   myosin, heavy chain 7, cardiac muscle, beta 
MYH6                  0.163   myosin heavy chain 6 
MYH7B                 0.163   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH14                 0.162   myosin, heavy chain 14 isoform 3 
MYO15A                0.162   myosin XV 
MYO1B                 0.160   myosin IB isoform 1 
MYO1B                 0.160   myosin IB isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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