CCDC55 3740

Name: CCDC55	Sequence: fasta or formatted (558aa)		NCBI GI: 14149807
Description: coiled-coil domain containing 55 isoform 1		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 32 3 C cysteine 0.7 4 1 D aspartate 7.5 42 4 E glutamate 14.5 81 4 F phenylalanine 1.8 10 1 G glycine 3.0 17 1 H histidine 3.4 19 2 I isoleucine 2.3 13 1 K lysine 12.5 70 3 L leucine 4.1 23 3 M methionine 1.8 10 1 N asparagine 4.5 25 2 P proline 3.0 17 2 Q glutamine 6.5 36 2 R arginine 11.1 62 2 S serine 7.9 44 2 T threonine 2.9 16 1 V valine 3.8 21 1 W tryptophan 0.4 2 1 Y tyrosine 2.5 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 55 isoform 1 PPIG 0.079 peptidylprolyl isomerase G LOC100286959 0.078 PREDICTED: hypothetical protein XP_002343921 ZC3H13 0.073 zinc finger CCCH-type containing 13 LOC283685 0.072 PREDICTED: golgi autoantigen, golgin subfamily a-li... TCHH 0.070 trichohyalin LOC283685 0.070 PREDICTED: golgi autoantigen, golgin subfamily a-li... PRPF38B 0.068 PRP38 pre-mRNA processing factor 38 (yeast) domain ... LOC727832 0.065 golgi autoantigen, golgin subfamily a-like SFRS12 0.064 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.064 splicing factor, arginine/serine-rich 12 isoform b [... RBM25 0.062 RNA binding motif protein 25 LOC100131202 0.062 PREDICTED: hypothetical protein LOC100131202 0.061 PREDICTED: hypothetical protein LOC283767 0.061 golgi autoantigen, golgin subfamily a-like CALD1 0.060 caldesmon 1 isoform 1 LOC100133599 0.057 PREDICTED: hypothetical protein LOC440243 0.057 PREDICTED: Putative golgin subfamily A member 6-lik... SFRS4 0.055 splicing factor, arginine/serine-rich 4 ANKRD12 0.054 ankyrin repeat domain 12 isoform 2 ANKRD12 0.054 ankyrin repeat domain 12 isoform 1 RSRC2 0.054 arginine/serine-rich coiled-coil 2 isoform a LOC100133599 0.054 PREDICTED: hypothetical protein LOC645202 0.054 PREDICTED: hypothetical protein LOC645202 LOC100134067 0.052 PREDICTED: hypothetical protein LOC100288837 0.052 PREDICTED: hypothetical protein XP_002343931, parti... SFRS18 0.050 splicing factor, arginine/serine-rich 130 SFRS18 0.050 splicing factor, arginine/serine-rich 130 UPF3B 0.049 UPF3 regulator of nonsense transcripts homolog B iso... SFRS11 0.048 splicing factor, arginine/serine-rich 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.