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Search of human proteins with 21362070
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21362070 hypothetical protein LOC79034 [Homo sapiens]
(449 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21362070 hypothetical protein LOC79034 [Homo sapiens] 900 0.0
gi|239753972 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11
gi|239755199 PREDICTED: hypothetical protein [Homo sapiens] 33 0.40
gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate... 33 0.40
gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo ... 33 0.53
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 33 0.69
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 33 0.69
gi|18201900 T-box 6 [Homo sapiens] 33 0.69
gi|13540549 potassium voltage-gated channel, subfamily H, member... 33 0.69
gi|27886651 potassium voltage-gated channel, subfamily H, member... 33 0.69
gi|239750721 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.90
gi|113204604 aristaless-like homeobox 3 [Homo sapiens] 32 1.2
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 32 1.2
gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens] 32 1.5
gi|157739940 nudix (nucleoside diphosphate linked moiety X)-type... 32 1.5
gi|102469694 galectin-9 isoform short [Homo sapiens] 31 2.0
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 31 2.0
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 31 2.0
gi|239740735 PREDICTED: hypothetical protein [Homo sapiens] 31 2.6
gi|126131104 fibrocystin isoform 2 [Homo sapiens] 31 2.6
gi|126131102 fibrocystin isoform 1 [Homo sapiens] 31 2.6
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 3.4
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 3.4
gi|239754993 PREDICTED: hypothetical protein [Homo sapiens] 30 3.4
gi|224831257 importin 13 [Homo sapiens] 30 4.4
gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] 30 4.4
gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ... 30 4.4
gi|109148550 N-acylethanolamine acid amidase isoform 1 precursor... 30 4.4
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 30 4.4
gi|21361937 proline rich 7 (synaptic) [Homo sapiens] 30 4.4
>gi|21362070 hypothetical protein LOC79034 [Homo sapiens]
Length = 449
Score = 900 bits (2325), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 1 MSDIRHSLLRRDALSAAKEVLYHLDIYFSSQLQSAPLPIVDKGPVELLEEFVFQVPKERS 60
MSDIRHSLLRRDALSAAKEVLYHLDIYFSSQLQSAPLPIVDKGPVELLEEFVFQVPKERS
Sbjct: 1 MSDIRHSLLRRDALSAAKEVLYHLDIYFSSQLQSAPLPIVDKGPVELLEEFVFQVPKERS 60
Query: 61 AQPKRLNSLQELQLLEIMCNYFQEQTKDSVRQIIFSSLFSPQGNKADDSRMSLLGKLVSM 120
AQPKRLNSLQELQLLEIMCNYFQEQTKDSVRQIIFSSLFSPQGNKADDSRMSLLGKLVSM
Sbjct: 61 AQPKRLNSLQELQLLEIMCNYFQEQTKDSVRQIIFSSLFSPQGNKADDSRMSLLGKLVSM 120
Query: 121 AVAVCRIPVLECAASWLQRTPVVYCVRLAKALVDDYCCLVPGSIQTLKQIFSASPRFCCQ 180
AVAVCRIPVLECAASWLQRTPVVYCVRLAKALVDDYCCLVPGSIQTLKQIFSASPRFCCQ
Sbjct: 121 AVAVCRIPVLECAASWLQRTPVVYCVRLAKALVDDYCCLVPGSIQTLKQIFSASPRFCCQ 180
Query: 181 FITSVTALYDLSSDDLIPPMDLLEMIVTWIFEDPRLILITFLNTPIAANLPIGFLELTPL 240
FITSVTALYDLSSDDLIPPMDLLEMIVTWIFEDPRLILITFLNTPIAANLPIGFLELTPL
Sbjct: 181 FITSVTALYDLSSDDLIPPMDLLEMIVTWIFEDPRLILITFLNTPIAANLPIGFLELTPL 240
Query: 241 VGLIRWCVKAPLAYKRKKKPPLSNGHVSNKVTKDPGVGMDRDSHLLYSKLHLSVLQVLMT 300
VGLIRWCVKAPLAYKRKKKPPLSNGHVSNKVTKDPGVGMDRDSHLLYSKLHLSVLQVLMT
Sbjct: 241 VGLIRWCVKAPLAYKRKKKPPLSNGHVSNKVTKDPGVGMDRDSHLLYSKLHLSVLQVLMT 300
Query: 301 LQLHLTEKNLYGRLGLILFDHMVPLVEEINRLADELNPLNASQEIELSLDRLAQALQVAM 360
LQLHLTEKNLYGRLGLILFDHMVPLVEEINRLADELNPLNASQEIELSLDRLAQALQVAM
Sbjct: 301 LQLHLTEKNLYGRLGLILFDHMVPLVEEINRLADELNPLNASQEIELSLDRLAQALQVAM 360
Query: 361 ASGALLCTRDDLRTLCSRLPHNNLLQLVISGPVQQSPHAALPPGFYPHIHTPPLGYGAVP 420
ASGALLCTRDDLRTLCSRLPHNNLLQLVISGPVQQSPHAALPPGFYPHIHTPPLGYGAVP
Sbjct: 361 ASGALLCTRDDLRTLCSRLPHNNLLQLVISGPVQQSPHAALPPGFYPHIHTPPLGYGAVP 420
Query: 421 AHPAAHPALPTHPGHTFISGVTFPFRPIR 449
AHPAAHPALPTHPGHTFISGVTFPFRPIR
Sbjct: 421 AHPAAHPALPTHPGHTFISGVTFPFRPIR 449
>gi|239753972 PREDICTED: hypothetical protein [Homo sapiens]
Length = 298
Score = 35.4 bits (80), Expect = 0.11
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 12/48 (25%)
Query: 398 HAALPPGFYPHIHTPPLGYGAV--PAHPAAHPAL----------PTHP 433
H ++ P YP IH PP + ++ P HP+ HP + PTHP
Sbjct: 164 HLSIYPPTYPSIHPPPTPHPSIHPPIHPSTHPLIHPSTHTSTHPPTHP 211
Score = 33.5 bits (75), Expect = 0.40
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 338 PLNASQEIELSLDRLAQAL--QVAMASGALLCTRDDLRTLCSRLPHNNLLQLVISGPVQQ 395
P +E EL+ + A + + ++ +GA LC L ++L+ V++ P
Sbjct: 2 PPGTPEESELTSPKPAYQIPGKSSLLTGAWLC-----------LSRGSILKDVLNQPTHP 50
Query: 396 SPH-AALPPGFYPHIHTPPLGYGAVPAHPAAHPALPTHP 433
+ H ++ P +P H P +P HP+ HP P HP
Sbjct: 51 TIHPSSTHPPIHPSTHLPIHPSTHLPIHPSTHP--PIHP 87
Score = 32.7 bits (73), Expect = 0.69
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Query: 392 PVQQSPHAALPPGFYPHIHT---PPLGYGAVPAHPAAHPALPTHPGHTFISGVTFPF 445
P+ S + + P +P IH PP Y +P HP+AHP + H FI +T F
Sbjct: 92 PIHPSTNPPIHPSTHPTIHPSTHPPSTY--LPIHPSAHPLI-----HPFIHPLTHLF 141
>gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 279
Score = 33.5 bits (75), Expect = 0.40
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 392 PVQQSPHAALPPGFYPHIHTPPLGYGAVPAHPAAHPALPTHPG-HTFISGVTFP 444
P S H ++ P +P H P P HP+ HP+ THP H T+P
Sbjct: 167 PTHPSTHPSIHPTIHPRAHPPIHPSIHSPTHPSIHPS--THPSTHPLTHPSTYP 218
Score = 32.7 bits (73), Expect = 0.69
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 389 ISGPVQQSPHAALPPGFYPHIHTPPLGYGAVPA-HPAAHPALPTHP 433
I PV S H P +P IH PP+ P+ HP+ HP P HP
Sbjct: 75 IHPPVHPSIHPPTRPSIHPSIH-PPVHLSTHPSTHPSIHP--PIHP 117
>gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
[Homo sapiens]
Length = 1043
Score = 33.5 bits (75), Expect = 0.40
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 375 LCSRLPHNNLLQLVISGPVQQSPHAALPPGFYPHIHTPPLGYGAVPAHPAAHPAL 429
L RLPHN L+LV++ P + P A+L G + P G A+ A P A P L
Sbjct: 62 LAPRLPHNLSLELVVAAPPARDP-ASLTRGLCQALVPP--GVAALLAFPEARPEL 113
>gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo
sapiens]
Length = 475
Score = 33.1 bits (74), Expect = 0.53
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 389 ISGPVQQSPHAALPPGFYPHIHTPPLGYGAVPA-HPAAHPALP---THP 433
I PV S H + P +P IH PP+ P+ HP HP +P THP
Sbjct: 194 IRPPVHPSTHPSTHPLIHPPIH-PPIHPSIHPSTHPPTHPPVPHPSTHP 241
Score = 29.3 bits (64), Expect = 7.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 393 VQQSPHAALPPGFYPHIHT---PPLG-YGAVPAHPAAHPALPTHP 433
V S H + P +P IH PP+ + P HP+ HP+ THP
Sbjct: 126 VHPSTHPSTHPSIHPFIHPPVHPPIHLHIHPPIHPSVHPS--THP 168
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 32.7 bits (73), Expect = 0.69
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 384 LLQLVISGPVQQSPHAAL-PPGFYPHIHT---PPLGYGAVPA-HPAAHPALPTHP 433
LL L +S P + H L PP P IH PP P+ HP HP++ THP
Sbjct: 8 LLVLAVSPPGKICIHPPLHPPTHSPSIHPSIHPPTHPSIHPSIHPPTHPSIHTHP 62
Score = 32.3 bits (72), Expect = 0.90
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 381 HNNLLQLVISGPVQQSPHAALPPGFYPHIHT-PPLG-YGAVPAHPAAHPALPTHP 433
H+ + I P S H ++ P +P IHT PP+ + P HP HP++ HP
Sbjct: 30 HSPSIHPSIHPPTHPSIHPSIHPPTHPSIHTHPPIHPHTHPPIHPPTHPSI--HP 82
Score = 29.3 bits (64), Expect = 7.6
Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
Query: 389 ISGPVQQSPHAALPPGFYPHIHTPPLGYGAVPAHPAAHPALPTHPG-HTFISGVTFP 444
I P S H + P +P +H P HP+ HP PTH H I T P
Sbjct: 72 IHPPTHPSIHPLIHPSIHPSLHPPTHS----SIHPSTHP--PTHSSIHPSIHPSTHP 122
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 32.7 bits (73), Expect = 0.69
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 392 PVQQSPHAALPPGFY--PHIHTPP-LGYGAVPAHPAAHPALPTHPGHTFISGVTFPFRPI 448
P+ P LPP P TPP L AV + PA H ALP P P +P
Sbjct: 826 PILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPA 885
Query: 449 R 449
R
Sbjct: 886 R 886
>gi|18201900 T-box 6 [Homo sapiens]
Length = 436
Score = 32.7 bits (73), Expect = 0.69
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 391 GPVQQSPHAALPPGF-----YPHIHTPPL-----GYGAVPAHPAAHPALPTHP 433
GP Q ++ PP YP + TP L G A P AAHP LP P
Sbjct: 18 GPAQPGADSSFPPALAEGYRYPELDTPKLDCFLSGMEAAPRTLAAHPPLPLLP 70
>gi|13540549 potassium voltage-gated channel, subfamily H, member 6
isoform 1 [Homo sapiens]
Length = 994
Score = 32.7 bits (73), Expect = 0.69
Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 12/108 (11%)
Query: 325 LVEEINRLADELNPLNASQEIELSLDRLAQALQVAMASGALLCTRDDLRTLCSRLPHNNL 384
L + +L ++N L + +LS R+ Q LQ M G + P +N
Sbjct: 822 LGSRLEQLQAQMNRLESRVSSDLS--RILQLLQKPMPQGHA--------SYILEAPASND 871
Query: 385 LQLVISGPVQQSPHAALPPGFYPHIHTPPLG--YGAVPAHPAAHPALP 430
L LV SP LP GF P TP G P H + P +P
Sbjct: 872 LALVPIASETTSPGPRLPQGFLPPAQTPSYGDLDDCSPKHRNSSPRMP 919
>gi|27886651 potassium voltage-gated channel, subfamily H, member 6
isoform 2 [Homo sapiens]
Length = 905
Score = 32.7 bits (73), Expect = 0.69
Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 12/108 (11%)
Query: 325 LVEEINRLADELNPLNASQEIELSLDRLAQALQVAMASGALLCTRDDLRTLCSRLPHNNL 384
L + +L ++N L + +LS R+ Q LQ M G + P +N
Sbjct: 733 LGSRLEQLQAQMNRLESRVSSDLS--RILQLLQKPMPQGHA--------SYILEAPASND 782
Query: 385 LQLVISGPVQQSPHAALPPGFYPHIHTPPLG--YGAVPAHPAAHPALP 430
L LV SP LP GF P TP G P H + P +P
Sbjct: 783 LALVPIASETTSPGPRLPQGFLPPAQTPSYGDLDDCSPKHRNSSPRMP 830
>gi|239750721 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 230
Score = 32.3 bits (72), Expect = 0.90
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 389 ISGPVQQSPHAALPPGFYPHIHTP--PLGYGAVPAHPAAHPALPTHPG-HTFISGVTFPF 445
I P+ S H ++ P Y IH P + ++ HP+ HP++ HP HT++ T+ F
Sbjct: 51 IHPPICSSIHPSIHPSTYLFIHLSMHPSIHASIHLHPSIHPSI--HPSIHTYMHTSTYLF 108
Score = 30.0 bits (66), Expect = 4.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 393 VQQSPHAALPPGFYPHIHT---PPLGYGAVPA-HPAAHPA--LPTHP 433
+ S H ++ P YP IH PP+ P+ HP+ HP+ L HP
Sbjct: 3 IHPSIHLSIHPSIYPFIHPCIHPPICSSIHPSIHPSIHPSIHLSIHP 49
>gi|113204604 aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 32.0 bits (71), Expect = 1.2
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 9/56 (16%)
Query: 391 GPVQQSPHAALPPGF--YPHIHTPPLGYGAVPAHPAAHPAL-------PTHPGHTF 437
GP SP P Y H H G+ VPA AAHP + PT GH+F
Sbjct: 257 GPCLVSPEGIPSPCMSPYSHPHGSVAGFMGVPAPSAAHPGIYSIHGFPPTLGGHSF 312
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 32.0 bits (71), Expect = 1.2
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 390 SGPVQQSPHAALPPGFYPHIHTPPLGYGAV-PAHPAAHPALPTHPGHTFISGVTFP 444
S P P ALPPG P + PP+ GA P+A HPGH FP
Sbjct: 242 SFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFP 297
>gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]
Length = 1114
Score = 31.6 bits (70), Expect = 1.5
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 16/73 (21%)
Query: 380 PHNNLLQLVISGPVQQSPHAALPPGFYPHIHTPPL---------------GYGAVPAHPA 424
P L Q + G Q H PP ++ H H P G+ A AH
Sbjct: 1015 PPEGLPQAAMHGHHTQYCHMQNPPPYHHHHHHHPPQHIQHAHQYHHGPHGGHPAYGAHAH 1074
Query: 425 AHPALPT-HPGHT 436
HP LP+ H GHT
Sbjct: 1075 GHPPLPSAHVGHT 1087
>gi|157739940 nudix (nucleoside diphosphate linked moiety X)-type
motif 19 [Homo sapiens]
Length = 375
Score = 31.6 bits (70), Expect = 1.5
Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 27/115 (23%)
Query: 351 RLAQALQVAMASGALLCTRDDLRTLCSRLPHNNLLQLVISGPVQQSPHAALPPG------ 404
R +A + +A+G +R + T SR P +L++ +Q+SPH PG
Sbjct: 11 RWRRAASIVLAAG---WSRPETATPPSRPPPAEGFRLLL---LQRSPHQGFMPGAHVFSG 64
Query: 405 ---------------FYPHIHTPPLGYGAVPAHPAAHPALPTHPGHTFISGVTFP 444
F PH P G G P A P+LP H + T P
Sbjct: 65 GVLDAADRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLP 119
>gi|102469694 galectin-9 isoform short [Homo sapiens]
Length = 323
Score = 31.2 bits (69), Expect = 2.0
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 378 RLPHNNLLQLVISGPVQQSPHAALPPGFYPH---------IHTPPLGYGAVPAHPAAHPA 428
R+P + + + ++G VQ S + PPG +P IHT G + + PA P
Sbjct: 125 RVPFHRVDTISVNGSVQLSYISFQPPGVWPANPAPITQTVIHTVQSAPGQMFSTPAIPPM 184
Query: 429 LPTHPGH-----TFISGVTFPFRPI 448
+ HP + T I G +P + I
Sbjct: 185 MYPHPAYPMPFITTILGGLYPSKSI 209
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 31.2 bits (69), Expect = 2.0
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 392 PVQQSPHAALPPGFYPHIHTPPLGYGAVPAHPAAHPALPTHPGHTFISGVTFPFRPI 448
P QQ P PP PH PP + P HP HP P H H ++ P P+
Sbjct: 597 PQQQPPPQHQPPHQPPH--QPPPQHQPPPQHPPQHP--PQHQHHHHHHHLSVPPPPL 649
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 31.2 bits (69), Expect = 2.0
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 389 ISGPVQQSPHAALPPGFYPHIHTP-----PLGYG---AVPAHPAAHPALPTHPGHTFISG 440
+ GP+ H + P +P +H P+G G P P P +P PG + SG
Sbjct: 624 MGGPMHPDMHPDMHPDMHPDMHADMHADMPMGPGMNPGPPMGPGGPPMMPYGPGDSPHSG 683
Query: 441 VTFPFRP 447
+ P P
Sbjct: 684 MMPPIPP 690
>gi|239740735 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 30.8 bits (68), Expect = 2.6
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 8/41 (19%)
Query: 407 PHIHTPPLGYGAVPAHPAAHPALPTHPGHTFISGVTFPFRP 447
P H PP Y PAA PA PTH +TFP P
Sbjct: 73 PAPHQPPAFYTICVLAPAARPACPTH--------ITFPEHP 105
>gi|126131104 fibrocystin isoform 2 [Homo sapiens]
Length = 3396
Score = 30.8 bits (68), Expect = 2.6
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 11 RDALSAAKEVLYHLDIYFSSQLQSAPLP 38
R LS A E LY L+ YF QL S+P P
Sbjct: 94 RSVLSEAHEGLYFLEAYFGGQLVSSPNP 121
>gi|126131102 fibrocystin isoform 1 [Homo sapiens]
Length = 4074
Score = 30.8 bits (68), Expect = 2.6
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 11 RDALSAAKEVLYHLDIYFSSQLQSAPLP 38
R LS A E LY L+ YF QL S+P P
Sbjct: 94 RSVLSEAHEGLYFLEAYFGGQLVSSPNP 121
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 397 PHAALPPGFYPHIHTPPLGYGAVPAHP--AAHPALPTHP 433
PH P H H P + +P HP HP LPTHP
Sbjct: 7 PHLPTHPHLPTHPHLPT--HPHLPTHPHLPTHPHLPTHP 43
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 397 PHAALPPGFYPHIHTPPLGYGAVPAHP--AAHPALPTHP 433
PH P H H P + +P HP HP LPTHP
Sbjct: 13 PHLPTHPHLPTHPHLPT--HPHLPTHPHLPTHPHLPTHP 49
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 397 PHAALPPGFYPHIHTPPLGYGAVPAHP--AAHPALPTHP 433
PH P H H P + +P HP HP LPTHP
Sbjct: 7 PHLPTHPHLPTHPHLPT--HPHLPTHPHLPTHPHLPTHP 43
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 397 PHAALPPGFYPHIHTPPLGYGAVPAHP--AAHPALPTHP 433
PH P H H P + +P HP HP LPTHP
Sbjct: 13 PHLPTHPHLPTHPHLPT--HPHLPTHPHLPTHPHLPTHP 49
>gi|239754993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 30.4 bits (67), Expect = 3.4
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 371 DLRTLCSRLPHNNLLQLVISGPVQQSPHAALPPGFYPHIHTPPLG 415
D +L S PH + L I P P + P PH H PP+G
Sbjct: 106 DEPSLLSPFPHTHQSPLAIPSPSASPPPSCAPA---PHSHPPPIG 147
>gi|224831257 importin 13 [Homo sapiens]
Length = 963
Score = 30.0 bits (66), Expect = 4.4
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 20/171 (11%)
Query: 47 LLEEFVFQVPKERSAQPKRLNSLQELQLLEIMCNYFQ----EQTKDSVRQIIFSSLFSPQ 102
L+ ++ Q+ K P N L + +L ++ N F +D L PQ
Sbjct: 613 LISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHHEDDHEGPELRKLPVPQ 672
Query: 103 GNKADDSRMSLLGKLVSMAVAVCRIPVLECAASWLQRTPVVYCV-----RLAKALVDDYC 157
G + + +L+ ++ WL VV V + K L+DD+
Sbjct: 673 GPNPVVVVLQQVFQLIQKVLS-----------KWLNDAQVVEAVCAIFEKSVKTLLDDFA 721
Query: 158 CLVPGSIQTLKQIFSASPRFCCQFITSVTALYDLSSDDLIPPMDLLEMIVT 208
+VP + L +++S P+ +T PP++ L ++VT
Sbjct: 722 PMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVT 772
>gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 864
Score = 30.0 bits (66), Expect = 4.4
Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 20/68 (29%)
Query: 380 PHNNLLQLVISGPVQQSPHAALPPGFYPHIHT-----------PPLGYGAVPAHPAAHPA 428
PH N LQL QQ P ++P G P IHT P G A P P
Sbjct: 329 PHQNFLQL------QQQP-LSIPKG--PSIHTRQQANPQGCPRPQAGDPAGPTKGLKCPC 379
Query: 429 LPTHPGHT 436
LPT GH+
Sbjct: 380 LPTRRGHS 387
>gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo
sapiens]
Length = 894
Score = 30.0 bits (66), Expect = 4.4
Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 20/68 (29%)
Query: 380 PHNNLLQLVISGPVQQSPHAALPPGFYPHIHT-----------PPLGYGAVPAHPAAHPA 428
PH N LQL QQ P ++P G P IHT P G A P P
Sbjct: 329 PHQNFLQL------QQQP-LSIPKG--PSIHTRQQANPQGCPRPQAGDPAGPTKGLKCPC 379
Query: 429 LPTHPGHT 436
LPT GH+
Sbjct: 380 LPTRRGHS 387
>gi|109148550 N-acylethanolamine acid amidase isoform 1 precursor
[Homo sapiens]
Length = 359
Score = 30.0 bits (66), Expect = 4.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 319 FDHMVPLVEEINRLADELNPLNASQEIELSLDRLAQALQV 358
+DH P +E +R + LNA+ + LSL+ L Q L V
Sbjct: 288 YDHWKPAPKEDDRRTSAIKALNATGQANLSLEALFQILSV 327
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 30.0 bits (66), Expect = 4.4
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 392 PVQQSPHAALPPGFYPHIHTPPLGYGAV-PAHPAAHPALPTHPGHTFISGVTFPFRP 447
PV + H ALPP +P + P G + P +PAA G+++ + P RP
Sbjct: 214 PVGPTAHGALPPAPFPVVSQPSFYSGPLGPTYPAAQLGPRGAAGYSWSPQRSMPPRP 270
>gi|21361937 proline rich 7 (synaptic) [Homo sapiens]
Length = 274
Score = 30.0 bits (66), Expect = 4.4
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 378 RLPHNNLLQLVISGPVQQSPHAALPPGFYPHIHTPPLGYGAVPAHPAAHPALPTHP 433
RL NL L + + A PPG P P PAH +HP + HP
Sbjct: 45 RLREQNLRALELEPLELEGSLAGSPPGLAPPQPPPHRSRLEAPAHAHSHPHVHVHP 100
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,818,399
Number of Sequences: 37866
Number of extensions: 834921
Number of successful extensions: 2630
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 2564
Number of HSP's gapped (non-prelim): 102
length of query: 449
length of database: 18,247,518
effective HSP length: 106
effective length of query: 343
effective length of database: 14,233,722
effective search space: 4882166646
effective search space used: 4882166646
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.