Guide to the Human Genome
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Name: C7orf26 Sequence: fasta or formatted (449aa) NCBI GI: 21362070
Description:

hypothetical protein LOC79034

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         32           2
 C cysteine            2.4         11           2
 D aspartate           4.9         22           2
 E glutamate           4.0         18           2
 F phenylalanine       3.8         17           1
 G glycine             4.0         18           1
 H histidine           3.3         15           1
 I isoleucine          5.6         25           2
 K lysine              4.0         18           3
 L leucine            15.8         71           2
 M methionine          2.2         10           1
 N asparagine          2.9         13           2
 P proline             8.2         37           2
 Q glutamine           4.9         22           2
 R arginine            5.1         23           2
 S serine              7.6         34           2
 T threonine           4.0         18           1
 V valine              6.9         31           2
 W tryptophan          0.7          3           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79034 
LOC100293557          0.011   PREDICTED: hypothetical protein 
LOC100131525          0.009   PREDICTED: hypothetical protein 
GRIN3B                0.009   glutamate receptor, ionotropic, N-methyl-D-aspartate...
LOC100291393          0.009   PREDICTED: hypothetical protein XP_002347924 
LOC100288473          0.009   PREDICTED: hypothetical protein XP_002343336 
BRD4                  0.009   bromodomain-containing protein 4 isoform long 
TBX6                  0.009   T-box 6 
KCNH6                 0.009   potassium voltage-gated channel, subfamily H, member...
KCNH6                 0.009   potassium voltage-gated channel, subfamily H, member...
LOC100132614          0.008   PREDICTED: hypothetical protein, partial 
ALX3                  0.008   aristaless-like homeobox 3 
SF3B4                 0.008   splicing factor 3b, subunit 4 
IQSEC1                0.008   IQ motif and Sec7 domain 1 isoform a 
NUDT19                0.008   nudix (nucleoside diphosphate linked moiety X)-type...
LGALS9                0.007   galectin-9 isoform short 
RBM33                 0.007   RNA binding motif protein 33 
ZC3H4                 0.007   zinc finger CCCH-type containing 4 
LOC100294185          0.007   PREDICTED: hypothetical protein 
PKHD1                 0.007   fibrocystin isoform 2 
PKHD1                 0.007   fibrocystin isoform 1 
LOC727832             0.006   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.006   golgi autoantigen, golgin subfamily a-like 
LOC100292408          0.006   PREDICTED: hypothetical protein 
IPO13                 0.006   importin 13 
LOC100293404          0.006   PREDICTED: hypothetical protein 
LOC100291131          0.006   PREDICTED: hypothetical protein XP_002346641 
NAAA                  0.006   N-acylethanolamine acid amidase isoform 1 precursor...
VPS37C                0.006   vacuolar protein sorting 37C 
PRR7                  0.006   proline rich 7 (synaptic) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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