Guide to the Human Genome
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Name: GRIN3B Sequence: fasta or formatted (1043aa) NCBI GI: 62988346
Description:

glutamate receptor, ionotropic, N-methyl-D-aspartate 3B

Referenced in:

Glutamate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.0        136           3
 C cysteine            1.6         17           2
 D aspartate           3.9         41           1
 E glutamate           4.9         51           2
 F phenylalanine       3.5         37           2
 G glycine             8.1         84           2
 H histidine           2.6         27           2
 I isoleucine          2.0         21           1
 K lysine              2.4         25           2
 L leucine            13.7        143           2
 M methionine          1.3         14           1
 N asparagine          1.4         15           1
 P proline             9.3         97           4
 Q glutamine           3.6         38           6
 R arginine            8.4         88           2
 S serine              6.0         63           2
 T threonine           4.3         45           2
 V valine              6.0         63           3
 W tryptophan          2.0         21           1
 Y tyrosine            1.6         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, ionotropic, N-methyl-D-aspartate... 
GRIN3A                0.444   glutamate receptor, ionotropic, N-methyl-D-aspartat...
GRIN2D                0.126   N-methyl-D-aspartate receptor subunit 2D precursor ...
GRIN2C                0.121   N-methyl-D-aspartate receptor subunit 2C precursor [...
GRIN2B                0.112   N-methyl-D-aspartate receptor subunit 2B precursor ...
GRIN2A                0.108   N-methyl-D-aspartate receptor subunit 2A isoform 2 ...
GRIN2A                0.108   N-methyl-D-aspartate receptor subunit 2A isoform 1 ...
GRIN2A                0.108   N-methyl-D-aspartate receptor subunit 2A isoform 1 pr...
GRIN1                 0.105   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.104   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.104   NMDA receptor 1 isoform NR1-2 precursor 
GRIA2                 0.067   glutamate receptor, ionotropic, AMPA 2 isoform 3 [H...
GRIA2                 0.067   glutamate receptor, ionotropic, AMPA 2 isoform 1 pre...
GRIA2                 0.066   glutamate receptor, ionotropic, AMPA 2 isoform 2 pr...
GRIA1                 0.064   glutamate receptor, ionotropic, AMPA 1 isoform 2 [H...
GRIA1                 0.064   glutamate receptor, ionotropic, AMPA 1 isoform 1 [H...
GRIK2                 0.063   glutamate receptor, ionotropic, kainate 2 isoform 1 ...
GRIK2                 0.063   glutamate receptor, ionotropic, kainate 2 isoform 2 ...
GRIA3                 0.063   glutamate receptor, ionotrophic, AMPA 3 isoform 1 p...
GRIA4                 0.062   glutamate receptor, ionotrophic, AMPA 4 isoform 1 p...
GRIA3                 0.062   glutamate receptor, ionotrophic, AMPA 3 isoform 2 p...
GRIK3                 0.062   glutamate receptor, ionotropic, kainate 3 precursor ...
GRIA4                 0.062   glutamate receptor, ionotrophic, AMPA 4 isoform 2 p...
GRIK1                 0.061   glutamate receptor, ionotropic, kainate 1 isoform 2 ...
GRIK1                 0.061   glutamate receptor, ionotropic, kainate 1 isoform 1 p...
GRIK4                 0.060   glutamate receptor KA1 precursor 
GRID2                 0.058   glutamate receptor, ionotropic, delta 2 
GRIK5                 0.057   glutamate receptor KA2 precursor 
GRID1                 0.055   glutamate receptor, ionotropic, delta 1 precursor [H...
APC2                  0.007   adenomatosis polyposis coli 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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