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Name: LGALS9 Sequence: fasta or formatted (323aa) NCBI GI: 102469694
Description:

galectin-9 isoform short

Referenced in:

Lectin Families

Other entries for this name:
alt prot [355aa] galectin-9 isoform long
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         15           1
 C cysteine            1.5          5           1
 D aspartate           3.1         10           1
 E glutamate           2.8          9           2
 F phenylalanine       7.4         24           1
 G glycine             8.4         27           2
 H histidine           4.0         13           1
 I isoleucine          5.6         18           1
 K lysine              1.9          6           1
 L leucine             7.1         23           2
 M methionine          2.8          9           2
 N asparagine          5.3         17           1
 P proline             8.4         27           2
 Q glutamine           6.2         20           1
 R arginine            4.6         15           1
 S serine              8.4         27           3
 T threonine           5.9         19           2
 V valine              8.0         26           2
 W tryptophan          1.2          4           1
 Y tyrosine            2.8          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galectin-9 isoform short 
LGALS9                0.974   galectin-9 isoform long 
LGALS9B               0.920   galectin-9 like 
LGALS9C               0.908   galectin 9 like 
LGALS4                0.296   galectin-4 
LGALS8                0.242   galectin-8 isoform b 
LGALS8                0.242   galectin-8 isoform b 
LGALS8                0.242   galectin-8 isoform a 
LGALS8                0.242   galectin-8 isoform a 
LGALS12               0.151   lectin, galactoside-binding, soluble, 12 isoform 1 ...
LGALS12               0.145   lectin, galactoside-binding, soluble, 12 isoform 2 [...
LGALS3                0.140   galectin 3 
LGALS12               0.134   lectin, galactoside-binding, soluble, 12 isoform 3 ...
LGALS12               0.116   lectin, galactoside-binding, soluble, 12 isoform 4 ...
LGALS12               0.106   lectin, galactoside-binding, soluble, 12 isoform 5 ...
LGALS7                0.103   galectin-7 
LGALS7B               0.103   galectin-7B 
HSPC159               0.096   hypothetical protein LOC29094 
LGALS13               0.068   galectin-13 
LGALS14               0.066   lectin, galactoside-binding, soluble, 14 isoform 1 [H...
LGALS14               0.065   lectin, galactoside-binding, soluble, 14 isoform 2 [...
LOC148003             0.062   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.062   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.062   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.060   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.060   PREDICTED: similar to lectin, galactoside-binding, s...
LOC148003             0.059   PREDICTED: similar to lectin, galactoside-binding, s...
LGALS1                0.057   galectin-1 
CLC                   0.052   Charcot-Leyden crystal protein 
LOC400696             0.045   hypothetical protein LOC400696 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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