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Search of human proteins with 113428887
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113428887 PREDICTED: hypothetical protein [Homo sapiens]
(284 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|113428887 PREDICTED: hypothetical protein [Homo sapiens] 605 e-173
gi|113429040 PREDICTED: hypothetical protein [Homo sapiens] 602 e-173
gi|169214872 PREDICTED: hypothetical protein [Homo sapiens] 600 e-172
gi|134244285 Notch homolog 3 [Homo sapiens] 35 0.057
gi|9945318 MAX binding protein [Homo sapiens] 35 0.075
gi|148727370 immediate early response 5-like [Homo sapiens] 35 0.098
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ... 34 0.17
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.22
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.22
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens] 33 0.28
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.28
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] 33 0.28
gi|169215350 PREDICTED: hypothetical protein [Homo sapiens] 33 0.28
gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo ... 33 0.28
gi|32140182 keratin associated protein 10-10 [Homo sapiens] 33 0.28
gi|145312251 EPH receptor A6 isoform a [Homo sapiens] 32 0.48
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 32 0.48
gi|223941923 OTU domain containing 1 [Homo sapiens] 32 0.63
gi|39812378 RAN binding protein 9 [Homo sapiens] 32 0.63
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 32 0.63
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 32 0.63
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 32 0.63
gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 32 0.63
gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 32 0.63
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 32 0.83
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 32 0.83
gi|169208819 PREDICTED: similar to kinase D-interacting substrat... 32 0.83
gi|239753283 PREDICTED: hypothetical protein [Homo sapiens] 32 0.83
gi|169215453 PREDICTED: hypothetical protein [Homo sapiens] 32 0.83
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 32 0.83
>gi|113428887 PREDICTED: hypothetical protein [Homo sapiens]
Length = 284
Score = 605 bits (1560), Expect = e-173
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MWLQAVSLQLMIHLTARGTDEIKAQRRYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
MWLQAVSLQLMIHLTARGTDEIKAQRRYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL
Sbjct: 1 MWLQAVSLQLMIHLTARGTDEIKAQRRYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
Query: 61 QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC
Sbjct: 61 QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
Query: 121 GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF
Sbjct: 121 GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
Query: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL
Sbjct: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
Query: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP
Sbjct: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
>gi|113429040 PREDICTED: hypothetical protein [Homo sapiens]
Length = 284
Score = 602 bits (1553), Expect = e-173
Identities = 283/284 (99%), Positives = 283/284 (99%)
Query: 1 MWLQAVSLQLMIHLTARGTDEIKAQRRYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
MWLQAVSLQLMIHLTARGTDEIKAQR YTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL
Sbjct: 1 MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
Query: 61 QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC
Sbjct: 61 QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
Query: 121 GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF
Sbjct: 121 GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
Query: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL
Sbjct: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
Query: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP
Sbjct: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
>gi|169214872 PREDICTED: hypothetical protein [Homo sapiens]
Length = 284
Score = 600 bits (1547), Expect = e-172
Identities = 282/284 (99%), Positives = 282/284 (99%)
Query: 1 MWLQAVSLQLMIHLTARGTDEIKAQRRYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
MWLQAVSLQLMIHLTARGTDEIKAQR YTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL
Sbjct: 1 MWLQAVSLQLMIHLTARGTDEIKAQRGYTLAVRLSRCCWCHHAGAAGTDLSHRQALRGLL 60
Query: 61 QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC
Sbjct: 61 QCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLAC 120
Query: 121 GAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
GAPAVSCKPQAA PLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF
Sbjct: 121 GAPAVSCKPQAAEPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRF 180
Query: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL
Sbjct: 181 CDLPEALGPSLSHHLWRKDLPLSGVFYLYRSSDRSASLIGFPGKQTQRAGHAGGLLGSAL 240
Query: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP
Sbjct: 241 THSTCEGGRVVWGAVMWGWNAGTPEASPELRGWNSPSELPTSGP 284
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 35.4 bits (80), Expect = 0.057
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 68 GSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAVSC 127
G+ + P+ R RV P+ ++ PP + W ++P P+ A GA A +
Sbjct: 2225 GAHSSPPKARFLRVPSEHPYLTPSPESPEHWASPSPPSLSDWSESTPSPATATGAMATTT 2284
Query: 128 KPQAAVPLPLCWVESWPIADTEFRPE 153
A PLPL S A T+ P+
Sbjct: 2285 GALPAQPLPLSVPSSLAQAQTQLGPQ 2310
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 35.0 bits (79), Expect = 0.075
Identities = 29/77 (37%), Positives = 32/77 (41%), Gaps = 17/77 (22%)
Query: 63 PVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLP-----S 117
P PP A AP T VIP VTN PQ PPP + A PLP
Sbjct: 74 PAPPPPLATPAPLT----VIPIPV--------VTNSPQPLPPPPPLPAAAQPLPLAPRQP 121
Query: 118 LACGAPAVSCKPQAAVP 134
GAP +S K A +P
Sbjct: 122 ALVGAPGLSIKEPAPLP 138
Score = 29.3 bits (64), Expect = 4.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 103 PPPCAVWPLASPLPSLACGAPAVSCKPQAAVPLP 136
PPP PLA+P P P V+ PQ P P
Sbjct: 72 PPPAPPPPLATPAPLTVIPIPVVTNSPQPLPPPP 105
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 34.7 bits (78), Expect = 0.098
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 12/81 (14%)
Query: 41 HHAGAAGTDLSHRQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQ 100
H A G L Q L P+ PP A PR PRA + C A P
Sbjct: 166 HGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRD------PRAPAACSAP------PG 213
Query: 101 ICPPPCAVWPLASPLPSLACG 121
PP A P ASP P+ + G
Sbjct: 214 AAPPAAAASPPASPAPASSPG 234
Score = 29.6 bits (65), Expect = 3.1
Identities = 32/98 (32%), Positives = 36/98 (36%), Gaps = 11/98 (11%)
Query: 40 CHHAGAAGTDLSHRQALRGLLQCP-VQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNY 98
C A AAG AL L C +QPP AP RG + P P
Sbjct: 137 CAAAAAAGAPAGGAGALSELPGCAALQPP---HGAPH-RGQPLEPLQPGPAPLPL----- 187
Query: 99 PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAVPLP 136
P P P A+ P P AC AP + P AA P
Sbjct: 188 PLPPPAPAALCP-RDPRAPAACSAPPGAAPPAAAASPP 224
>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
isoform 1 [Homo sapiens]
Length = 666
Score = 33.9 bits (76), Expect = 0.17
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 58 GLLQCPVQPPGSARAAPRTRGDRVIP--RATSGCP-AEARVTNYPQICPPPCAVWPLASP 114
G L CP P S AP R ++ R SG P AE ++ P C P + PL+SP
Sbjct: 430 GPLPCPSPAPFSPLPAPSPRISDILNSVRRGSGTPEAEGPLSAGPPPCLSPALLGPLSSP 489
Query: 115 LPSLACGAPAV---SCKPQAAVPLPL 137
P ++ +V S P+A P P+
Sbjct: 490 SPRISDILNSVRRGSGTPEAEGPSPV 515
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 33.5 bits (75), Expect = 0.22
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 60 LQCPVQPPGSARAAPRTRGDRVIPRATSGCPAE------ARVTNYPQICPPPCAVWPLAS 113
+Q P PP S +P P + + P + A P PPP A PLA+
Sbjct: 448 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 507
Query: 114 PLPSLA----CGAPAVSCKPQAAVPLP 136
P LA PA++ P A+P P
Sbjct: 508 PPLQLAKPPPQAPPALATPPLQALPSP 534
Score = 32.0 bits (71), Expect = 0.63
Identities = 32/105 (30%), Positives = 38/105 (36%), Gaps = 20/105 (19%)
Query: 53 RQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGC-PAEARVTNYPQICPP------- 104
R A R L AR+ P RG P S P + PQ+ PP
Sbjct: 236 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 295
Query: 105 --PCAVWPLASPLPSLACGAPAVSCKP----------QAAVPLPL 137
P + PLA+P PS A + A P Q A PLPL
Sbjct: 296 LGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPL 340
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 33.5 bits (75), Expect = 0.22
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 60 LQCPVQPPGSARAAPRTRGDRVIPRATSGCPAE------ARVTNYPQICPPPCAVWPLAS 113
+Q P PP S +P P + + P + A P PPP A PLA+
Sbjct: 409 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 468
Query: 114 PLPSLA----CGAPAVSCKPQAAVPLP 136
P LA PA++ P A+P P
Sbjct: 469 PPLQLAKPPPQAPPALATPPLQALPSP 495
Score = 32.7 bits (73), Expect = 0.37
Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Query: 53 RQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGC-PAEARVTNYPQICPPPCAVWPL 111
R A R L AR+ P RG P S P + PQ+ PP P
Sbjct: 227 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 286
Query: 112 ASPLPSLACGAPAVSCKPQAAVPLPLCWVESWP 144
PL S P+ S P + P L + S P
Sbjct: 287 LGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPP 319
>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 33.1 bits (74), Expect = 0.28
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 25/91 (27%)
Query: 99 PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAG 158
P IC P C+V P+ G+ A SC+P VP T +P
Sbjct: 156 PAICEPSCSVSSCCQPV-----GSEATSCQPVLCVP-------------TSCQP------ 191
Query: 159 QVEEEQSCEEESLGSPQLCQRFCDLPEALGP 189
V + SC + + P C C LP + P
Sbjct: 192 -VLCKSSCCQPVVCEPSCCSAVCTLPSSCQP 221
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 33.1 bits (74), Expect = 0.28
Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 53 RQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGC-PAEARVTNYPQICPP------- 104
R A R L AR+ P RG P S P + PQ+ PP
Sbjct: 236 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 295
Query: 105 --PCAVWPLASPLPSLACGAPAVSCKPQAAVPLPLCWVESWPIA 146
P + PLA+P PS P V AA PLP S P+A
Sbjct: 296 LGPLSSSPLATPSPSGTKARP-VPPPDNAATPLPATLPPSPPLA 338
Score = 30.8 bits (68), Expect = 1.4
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Query: 60 LQCPVQPPGSARAAPRTRGDRVIPRATSGCPAE------ARVTNYPQICPPPCAVWPLAS 113
+Q P PP S +P P + + P + A P PPP A PLA+
Sbjct: 673 VQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAA 732
Query: 114 PLPSLACGAPAVSCKPQAAVPLP 136
P + PA +A P P
Sbjct: 733 PPLQVPPSPPASPPMSPSATPPP 755
Score = 28.5 bits (62), Expect = 7.0
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 60 LQCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCA---VWPLASPLP 116
LQ P PP S +P +P + P Q+ P P A + PLA P P
Sbjct: 735 LQVPPSPPASPPMSPSATPPPRVPPLLAAPPL--------QVPPSPPASLPMSPLAKPPP 786
Query: 117 SLACGAPAVSCKPQAAVPLP 136
PA++ P A+P P
Sbjct: 787 Q---APPALATPPLQALPSP 803
>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 33.1 bits (74), Expect = 0.28
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 25/91 (27%)
Query: 99 PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAG 158
P IC P C+V P+ G+ A SC+P VP T +P
Sbjct: 156 PAICEPSCSVSSCCQPV-----GSEATSCQPVLCVP-------------TSCQP------ 191
Query: 159 QVEEEQSCEEESLGSPQLCQRFCDLPEALGP 189
V + SC + + P C C LP + P
Sbjct: 192 -VLCKSSCCQPVVCEPSCCSAVCTLPSSCQP 221
>gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 33.1 bits (74), Expect = 0.28
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 9/81 (11%)
Query: 67 PGSARAAPRTRGDRVI----PRATSGCPAEA----RVTNYPQICPPPCAVW-PLASPLPS 117
P S P R I PR S P RV++ P PPC V PL P
Sbjct: 474 PNSPATVPGARRSPQILLWAPRHVSSPPPRVQPPCRVSSPPPRVQPPCRVSSPLPRVQPP 533
Query: 118 LACGAPAVSCKPQAAVPLPLC 138
AC AP + +P A P C
Sbjct: 534 AACPAPLLRVQPPAVSSPPAC 554
>gi|239745811 PREDICTED: hypothetical protein XP_002343557 [Homo
sapiens]
Length = 517
Score = 33.1 bits (74), Expect = 0.28
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 25/91 (27%)
Query: 99 PQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAG 158
P IC P C+V P+ G+ A SC+P VP T +P
Sbjct: 156 PAICEPSCSVSSCCQPV-----GSEATSCQPVLCVP-------------TSCQP------ 191
Query: 159 QVEEEQSCEEESLGSPQLCQRFCDLPEALGP 189
V + SC + + P C C LP + P
Sbjct: 192 -VLCKSSCCQPVVCEPSCCSAVCTLPSSCQP 221
>gi|32140182 keratin associated protein 10-10 [Homo sapiens]
Length = 251
Score = 33.1 bits (74), Expect = 0.28
Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 25/111 (22%)
Query: 86 TSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAVSCKPQAAVPLPLCWVESWPI 145
+S C RV + P+ C PC +P PSL + C P + V P C
Sbjct: 10 SSACTDSWRVVDCPESCCEPCC----CAPAPSL-----TLVCTPVSCVSSPCC------- 53
Query: 146 ADTEFRPEGRKAGQVE-------EEQSCEEESLGSPQLCQRFCDLPEALGP 189
T P ++G ++ SC+ + S CQ+ C +P P
Sbjct: 54 -QTACEPSACQSGYTSSCTTPCYQQSSCQPDCCTSSP-CQQACCVPVCCVP 102
>gi|145312251 EPH receptor A6 isoform a [Homo sapiens]
Length = 1130
Score = 32.3 bits (72), Expect = 0.48
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 100 QICPPPCAVWPLASPLPSLACGAPAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQ 159
Q PP A +SP P A + A + P P P C V P RP AG+
Sbjct: 2 QFPSPPAA---RSSPAPQAASSSEAAA--PATGQPGPSCPV---PGTSRRGRPGTPPAGR 53
Query: 160 VEEEQSCEEESLG-SPQLCQRFC 181
VEEE+ EEE + P Q C
Sbjct: 54 VEEEEEEEEEDVDKDPHPTQNTC 76
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 32.3 bits (72), Expect = 0.48
Identities = 39/132 (29%), Positives = 46/132 (34%), Gaps = 40/132 (30%)
Query: 63 PVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGA 122
PV PG AAP G V + G P CPPP A S A G+
Sbjct: 732 PVPGPGPQGAAPEPLGASVQRDSAQGRP-----------CPPPQAPANQPEGASSAAPGS 780
Query: 123 PAVSCKPQAAVPLPLCWVESWPIADTEFRPEGRKAGQVEEEQSCEEESLGSPQLCQRFCD 182
P V P A LP VE P E P G +G +
Sbjct: 781 P-VPAPPTKASALP---VEQGP---AEPIPPGVASGGLR--------------------- 812
Query: 183 LPEALGPSLSHH 194
P+ALGP+ +HH
Sbjct: 813 -PDALGPTTAHH 823
>gi|223941923 OTU domain containing 1 [Homo sapiens]
Length = 481
Score = 32.0 bits (71), Expect = 0.63
Identities = 34/106 (32%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 35 SRCCWCHHAGAAGTDLSHRQ--ALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGCPAE 92
S C + AGA G + A + +QPPG+A AAP P A +
Sbjct: 5 SSVCTHYPAGAPGPTAAAPAPPAAATPFKVSLQPPGAAGAAPEPETGECQPAAAAEHREA 64
Query: 93 ARVTNYPQICPPPC--AVWPLASPLPSLACGAPAVSCKPQAAVPLP 136
A V C V A+P S A G P SCKP PLP
Sbjct: 65 AAVPAAKMPAFSSCFEVVSGAAAP-ASAAAGPPGASCKP----PLP 105
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 32.0 bits (71), Expect = 0.63
Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 12/93 (12%)
Query: 44 GAAGTDLSHRQALRGLLQCPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICP 103
GA G L A LL P PP A AAP P A++ PA
Sbjct: 54 GAGGEGLG--AAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASG---------- 101
Query: 104 PPCAVWPLASPLPSLACGAPAVSCKPQAAVPLP 136
PP A P P+ PA+ AA P P
Sbjct: 102 PPAPPGLAAGPGPAGGAPTPALVAGSSAAAPFP 134
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 32.0 bits (71), Expect = 0.63
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 62 CPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACG 121
CP + +A A+PR S A+ R P P P PL P P L
Sbjct: 362 CPGELKATAPASPRL--------GQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPA 413
Query: 122 APAVSCKPQAAVP 134
AP + C +AA P
Sbjct: 414 APPLPCAQKAAHP 426
Score = 29.3 bits (64), Expect = 4.1
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 66 PPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAV 125
PP S P T + P+A G + T P I PP +WP P +L PA
Sbjct: 619 PPQSTTLLPTTS---LQPKAMLGPAIPPKATPEPAI-PPKATLWPATPPKATL---GPAT 671
Query: 126 SCKPQAAVPLPLCWVESWPIADT 148
K + PL IA T
Sbjct: 672 PLKATSGPTTPLKATSGPAIAST 694
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 32.0 bits (71), Expect = 0.63
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 62 CPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACG 121
CP + +A A+PR S A+ R P P P PL P P L
Sbjct: 362 CPGELKATAPASPRL--------GQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPA 413
Query: 122 APAVSCKPQAAVP 134
AP + C +AA P
Sbjct: 414 APPLPCAQKAAHP 426
Score = 29.3 bits (64), Expect = 4.1
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 66 PPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAV 125
PP S P T + P+A G + T P I PP +WP P +L PA
Sbjct: 619 PPQSTTLLPTTS---LQPKAMLGPAIPPKATPEPAI-PPKATLWPATPPKATL---GPAT 671
Query: 126 SCKPQAAVPLPLCWVESWPIADT 148
K + PL IA T
Sbjct: 672 PLKATSGPTTPLKATSGPAIAST 694
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 32.0 bits (71), Expect = 0.63
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 62 CPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACG 121
CP + +A A+PR S A+ R P P P PL P P L
Sbjct: 362 CPGELKATAPASPRL--------GQSQSQADERAGTPPPAPPLPPPAPPLPPPAPPLPPA 413
Query: 122 APAVSCKPQAAVP 134
AP + C +AA P
Sbjct: 414 APPLPCAQKAAHP 426
Score = 29.3 bits (64), Expect = 4.1
Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 66 PPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACGAPAV 125
PP S P T + P+A G + T P I PP +WP P +L PA
Sbjct: 619 PPQSTTLLPTTS---LQPKAMLGPAIPPKATPEPAI-PPKATLWPATPPKATL---GPAT 671
Query: 126 SCKPQAAVPLPLCWVESWPIADT 148
K + PL IA T
Sbjct: 672 PLKATSGPTTPLKATSGPAIAST 694
>gi|188219577 ring finger protein 19B isoform a [Homo sapiens]
Length = 732
Score = 32.0 bits (71), Expect = 0.63
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 99 PQICPPPCAVWPLASPLPSLACGAP--AVSCKPQAAVPLPLCWVESWPIADTEFRPEGRK 156
PQ PPP A P +P P+ A G P A+ +P A + P D E EG
Sbjct: 52 PQAEPPPPAAQPPPAPAPAAAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGG 111
Query: 157 AGQVEEE 163
G E E
Sbjct: 112 PGAEEVE 118
>gi|188219579 ring finger protein 19B isoform b [Homo sapiens]
Length = 587
Score = 32.0 bits (71), Expect = 0.63
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 99 PQICPPPCAVWPLASPLPSLACGAP--AVSCKPQAAVPLPLCWVESWPIADTEFRPEGRK 156
PQ PPP A P +P P+ A G P A+ +P A + P D E EG
Sbjct: 52 PQAEPPPPAAQPPPAPAPAAAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGG 111
Query: 157 AGQVEEE 163
G E E
Sbjct: 112 PGAEEVE 118
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 31.6 bits (70), Expect = 0.83
Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 22/120 (18%)
Query: 104 PPCAVWPLASPLPSLACGAPAVSCK---PQAAVPLPLCWVESW----PIADTEFRPEGRK 156
PP P P A S + A+PLP+ ++ P ++ + GR
Sbjct: 233 PPSKASPAQDGRPPQTAAREATSIPGFPAEGAIPLPVDFLSKVSTEIPASEPDGPSVGRA 292
Query: 157 AGQ---------------VEEEQSCEEESLGSPQLCQRFCDLPEALGPSLSHHLWRKDLP 201
GQ V++EQ+ EE LG + PEA GPSL DLP
Sbjct: 293 KGQDAPLEFTFHVEITPNVQKEQAHSEEHLGRAAFPGAPGEGPEARGPSLGEDTKEADLP 352
>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
sapiens]
Length = 758
Score = 31.6 bits (70), Expect = 0.83
Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 22/120 (18%)
Query: 104 PPCAVWPLASPLPSLACGAPAVSCK---PQAAVPLPLCWVESW----PIADTEFRPEGRK 156
PP P P A S + A+PLP+ ++ P ++ + GR
Sbjct: 233 PPSKASPAQDGRPPQTAAREATSIPGFPAEGAIPLPVDFLSKVSTEIPASEPDGPSVGRA 292
Query: 157 AGQ---------------VEEEQSCEEESLGSPQLCQRFCDLPEALGPSLSHHLWRKDLP 201
GQ V++EQ+ EE LG + PEA GPSL DLP
Sbjct: 293 KGQDAPLEFTFHVEITPNVQKEQAHSEEHLGRAAFPGAPGEGPEARGPSLGEDTKEADLP 352
>gi|169208819 PREDICTED: similar to kinase D-interacting substrate
220 [Homo sapiens]
Length = 380
Score = 31.6 bits (70), Expect = 0.83
Identities = 42/137 (30%), Positives = 54/137 (39%), Gaps = 19/137 (13%)
Query: 158 GQVEEEQSCEEESLGSPQLCQRFCDLPEALGPS-LSHHLWRKDLPLSGVF-YLYRSSDRS 215
G+ +CE L + QL +F PEA + S +W V +L RS R
Sbjct: 84 GRTALSLACERGHLDAVQLLVQFSGDPEAADSAGNSPVMWAAACGHGAVLEFLVRSFRR- 142
Query: 216 ASLIGFPGKQTQRAGHAGGLLGSALTHSTC------EGGRVVWGAVMWGWNAGT------ 263
+G +T RAG L +A H TC GR A G N+ +
Sbjct: 143 ---LGLRLDRTNRAGLTALQLAAARGHGTCVQALTGPWGRAAAAAAARGSNSDSPPGRPA 199
Query: 264 PEASPELRGWNSPSELP 280
P ASPE R SP LP
Sbjct: 200 PAASPEHRR-PSPRRLP 215
>gi|239753283 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 31.6 bits (70), Expect = 0.83
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 30 LAVRLSRCCWCHHAGA-------AGTDLSHRQALRGLLQCPVQPPGSARAAPRTRGDRVI 82
LA RL R C A A AG+ L+H R P P S R +P++ R +
Sbjct: 28 LAGRLGRQCVSRQAAAGSRGPLLAGSLLAHLAEQRQWWLVPPAQPPSYRQSPKSMSLRNL 87
Query: 83 PRATS--GCPAEARVTNYPQ 100
P+ TS G E R+ +P+
Sbjct: 88 PQRTSPAGRQPEGRMRGFPR 107
>gi|169215453 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 31.6 bits (70), Expect = 0.83
Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 9/81 (11%)
Query: 67 PGSARAAPRTRGDRVI----PRATSGCPAEAR----VTNYPQICPPPCAVW-PLASPLPS 117
P S P R I PR S P + V++ P PPC V PL P
Sbjct: 474 PNSPATVPGARRSPQILLWAPRHVSSPPPRVQPPCHVSSPPPRVQPPCRVSSPLPRVQPP 533
Query: 118 LACGAPAVSCKPQAAVPLPLC 138
AC AP + +P A P C
Sbjct: 534 AACPAPLLRVQPPAVSSPPAC 554
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 31.6 bits (70), Expect = 0.83
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 62 CPVQPPGSARAAPRTRGDRVIPRATSGCPAEARVTNYPQICPPPCAVWPLASPLPSLACG 121
C PP + AA V P A +G PA A YP P A ASPL ++
Sbjct: 133 CAASPPAAVPAAVPAA---VRPPA-AGPPAAALAAVYPAAADPSAASLCAASPLAAVPAA 188
Query: 122 APAVSCKPQAAVP 134
A + P A P
Sbjct: 189 ASPAAVAPAAVCP 201
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,089,161
Number of Sequences: 37866
Number of extensions: 816593
Number of successful extensions: 3088
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 2911
Number of HSP's gapped (non-prelim): 278
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.