BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|21361320 TRK-fused [Homo sapiens] (400 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|21361320 TRK-fused [Homo sapiens] 814 0.0 gi|56090139 TRK-fused [Homo sapiens] 814 0.0 gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 68 2e-11 gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 68 2e-11 gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 67 3e-11 gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 65 8e-11 gi|150170670 piccolo isoform 2 [Homo sapiens] 64 2e-10 gi|150378539 piccolo isoform 1 [Homo sapiens] 64 2e-10 gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 64 2e-10 gi|55750053 atrophin-1 [Homo sapiens] 61 2e-09 gi|55750041 atrophin-1 [Homo sapiens] 61 2e-09 gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 59 8e-09 gi|19924099 synapsin I isoform Ia [Homo sapiens] 58 2e-08 gi|19924097 synapsin I isoform Ib [Homo sapiens] 58 2e-08 gi|33286444 mastermind-like 2 [Homo sapiens] 57 3e-08 gi|162951884 R3H domain containing 2 [Homo sapiens] 57 3e-08 gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 56 5e-08 gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 56 5e-08 gi|5454064 RNA binding motif protein 14 [Homo sapiens] 56 7e-08 gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 55 9e-08 gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 55 9e-08 gi|148277037 AP2 associated kinase 1 [Homo sapiens] 55 1e-07 gi|124378039 SEC16 homolog A [Homo sapiens] 55 1e-07 gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 54 2e-07 gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 54 2e-07 gi|188536004 zinc finger protein 469 [Homo sapiens] 54 2e-07 gi|73695473 roquin [Homo sapiens] 54 2e-07 gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 53 6e-07 gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 53 6e-07 gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 53 6e-07 >gi|21361320 TRK-fused [Homo sapiens] Length = 400 Score = 814 bits (2103), Expect = 0.0 Identities = 400/400 (100%), Positives = 400/400 (100%) Query: 1 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD 60 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD Sbjct: 1 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD 60 Query: 61 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL 120 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL Sbjct: 61 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL 120 Query: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN Sbjct: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180 Query: 181 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE 240 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE Sbjct: 181 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE 240 Query: 241 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP 300 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP Sbjct: 241 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP 300 Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR Sbjct: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360 Query: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR 400 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR Sbjct: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR 400 >gi|56090139 TRK-fused [Homo sapiens] Length = 400 Score = 814 bits (2103), Expect = 0.0 Identities = 400/400 (100%), Positives = 400/400 (100%) Query: 1 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD 60 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD Sbjct: 1 MNGQLDLSGKLIIKAQLGEDIRRIPIHNEDITYDELVLMMQRVFRGKLLSNDEVTIKYKD 60 Query: 61 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL 120 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL Sbjct: 61 EDGDLITIFDSSDLSFAIQCSRILKLTLFVNGQPRPLESSQVKYLRRELIELRNKVNRLL 120 Query: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN Sbjct: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180 Query: 181 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE 240 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE Sbjct: 181 VMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE 240 Query: 241 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP 300 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP Sbjct: 241 GQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAP 300 Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR Sbjct: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360 Query: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR 400 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR Sbjct: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGYR 400 >gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] Length = 2285 Score = 67.8 bits (164), Expect = 2e-11 Identities = 79/256 (30%), Positives = 97/256 (37%), Gaps = 53/256 (20%) Query: 170 PLKNQDEINKNVMSAFGLTD--DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQ-PQQ 226 P D++ K +G T+ Q GPPS P + G P P G Q PQ+ Sbjct: 380 PSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGH-GYP---------GQPYGSQTPQR 429 Query: 227 PPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ 286 P T + G Y Q Q P Q P YG Q Y Q P Q Sbjct: 430 YPMTMQGRAQSAMGGLSYTQ---------QIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQ 480 Query: 287 QFQGYGQQPTSQAP--APAFSGQPQ--------------QLPAQPPQQYQASNYPAQTYT 330 Q Y QQP SQ P P++ QPQ Q P+QPP Q + YP+Q T Sbjct: 481 QQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540 Query: 331 AQ---TSQPTNYTVAPASQPGMAPSQPGAYQP-RPGFTSLPGSTMTPPP----SGPNPYA 382 Q SQP P SQP A S QP +P ++L P P S Y+ Sbjct: 541 TQQHPQSQP------PYSQP-QAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYS 593 Query: 383 RNRPPFGQGYTQPGPG 398 + R P Q +Q G Sbjct: 594 QQRFPPPQELSQDSFG 609 Score = 48.1 bits (113), Expect = 1e-05 Identities = 59/225 (26%), Positives = 80/225 (35%), Gaps = 38/225 (16%) Query: 193 SGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQ-QQA 251 S PS P +S P S++ HP QPPY+ Q Q+ YQQ Q QQ Sbjct: 519 SQQPSQPPHQQSPAPYPSQQSTTQQHPQS----QPPYSQPQAQSP------YQQQQPQQP 568 Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSG----- 306 QA QPQ Q +A Q+ P Q +G Q +S + G Sbjct: 569 APSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDM 628 Query: 307 ------QPQQLP------AQPPQQYQASNYPAQTYTAQTS---QPTNYTVAPASQPGMAP 351 +P LP P + + P + + +S + +N +P S P +P Sbjct: 629 NLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFS-PHTSP 687 Query: 352 SQPGAYQPRPGFTSLPGSTM------TPPPSGPNPYARNRPPFGQ 390 PG P P P S P + P RPP GQ Sbjct: 688 HLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQ 732 Score = 47.0 bits (110), Expect = 3e-05 Identities = 57/222 (25%), Positives = 80/222 (36%), Gaps = 39/222 (17%) Query: 195 PPSAPA----EDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQ 250 PP APA R GTP S A++++ + PP + + + A Q G M Sbjct: 223 PPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASAS-SSSSSFAQQRFGAMGGGGPSA 281 Query: 251 AGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQ-PQ 309 AG G QP A P Q T P + +QGY S P +G+ P Sbjct: 282 AGGGTPQPTATPTLNQLL-----------TSPSSARGYQGYPGGDYSGGPQDGGAGKGPA 330 Query: 310 QLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPAS------------QPGMAPSQPGAY 357 + +Q A+ A + + ++P S QP Q G Sbjct: 331 DMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKM 390 Query: 358 QPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGY 399 +P+P + P S PPSGP QG+ PG Y Sbjct: 391 RPQPYGGTNPYSQQQGPPSGPQ----------QGHGYPGQPY 422 Score = 42.7 bits (99), Expect = 6e-04 Identities = 58/213 (27%), Positives = 76/213 (35%), Gaps = 38/213 (17%) Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQP--QQPPYTGAQTQAGQIEGQMYQQYQQ 249 + GP +P G+P S+A S S P P Q PP + +GQ + M+ Q Sbjct: 692 IRGPSPSPV----GSPASVAQSRSGPLSPAAVPGNQMPP----RPPSGQSDSIMHPSMNQ 743 Query: 250 QA-----GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT-SQAPAPA 303 + GY + PQ P Q G S Q +G Q Y Q S P Sbjct: 744 SSIAQDRGYMQRNPQMPQYSSPQPGSALSPR--QPSGGQIHTGMGSYQQNSMGSYGPQGG 801 Query: 304 FSGQPQQLPAQPPQQYQA---SNYPAQTYTAQTSQPTNYTVAPASQPGMAP--------- 351 G P QP Y A +NYP+ + P QPG+ P Sbjct: 802 QYGPQGGYPRQP--NYNALPNANYPSAGMAGGIN-PMGAGGQMHGQPGIPPYGTLPPGRM 858 Query: 352 --SQPGAYQPRPGFTSLP---GSTMTPPPSGPN 379 + G P ++P GS M PPP G N Sbjct: 859 SHASMGNRPYGPNMANMPPQVGSGMCPPPGGMN 891 Score = 40.4 bits (93), Expect = 0.003 Identities = 65/237 (27%), Positives = 78/237 (32%), Gaps = 65/237 (27%) Query: 205 GTPDS--IASSSSAAHPPGVQPQQPPYTGAQ-TQAGQIEGQMYQQYQQQAGYGAQQPQAP 261 GTP S + + Q + P G A + EG+MY QQ Q P Sbjct: 1347 GTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLP 1406 Query: 262 PQQPQ------------------QYGIQYSASYSQQT------GPQQPQQFQGYGQQPTS 297 P QPQ QYG Y A+ + T GPQ FQ +G+ S Sbjct: 1407 PAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQ-FGRDRVS 1465 Query: 298 QAPA--------PAFSGQPQQLPAQPPQQ---YQASNYPAQTYTAQTSQPTN-------- 338 P P G P Q A+ QQ +Q N TY Q T Sbjct: 1466 APPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRN--DMTYNYANRQSTGSAPQGPAY 1523 Query: 339 ----------YTVAPASQPGMAPS----QP--GAYQPRPGFTSLPGSTMTPPPSGPN 379 +T A+ G PS QP G P P T P S PPPS N Sbjct: 1524 HGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPPPSMQN 1580 Score = 39.3 bits (90), Expect = 0.006 Identities = 47/189 (24%), Positives = 60/189 (31%), Gaps = 23/189 (12%) Query: 220 PGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQ 279 PG+ P+ TGA Q + + Y QQ Q Q+ YG Q+S + Sbjct: 1292 PGIGPEGNMSTGAP-QPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPS 1350 Query: 280 TGPQQPQQFQGYGQQPTS---------------------QAPAPAFSGQPQQLPAQPPQQ 318 P QQ Y QQ + P GQPQQ P Q Sbjct: 1351 GSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQP 1410 Query: 319 YQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGP 378 AS A + Q Y A + A + A P+ F G P G Sbjct: 1411 QPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGT 1470 Query: 379 NPYARNRPP 387 N +N PP Sbjct: 1471 NA-QQNMPP 1478 Score = 32.3 bits (72), Expect = 0.78 Identities = 34/118 (28%), Positives = 42/118 (35%), Gaps = 18/118 (15%) Query: 294 QPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS- 352 QP Q P+PA SG Q Q PQ +S T T ++ P PGM+ S Sbjct: 1127 QPKIQPPSPAGSGSMQ--GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIP-PLPGMSRSN 1183 Query: 353 -----------QPGAYQPRPGFTSLPG---STMTPPPSGPNPYARNRPPFGQGYTQPG 396 +Q R T PG S T G Y N+ P+G PG Sbjct: 1184 SVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG 1241 >gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] Length = 2068 Score = 67.8 bits (164), Expect = 2e-11 Identities = 79/256 (30%), Positives = 97/256 (37%), Gaps = 53/256 (20%) Query: 170 PLKNQDEINKNVMSAFGLTD--DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQ-PQQ 226 P D++ K +G T+ Q GPPS P + G P P G Q PQ+ Sbjct: 380 PSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGH-GYP---------GQPYGSQTPQR 429 Query: 227 PPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ 286 P T + G Y Q Q P Q P YG Q Y Q P Q Sbjct: 430 YPMTMQGRAQSAMGGLSYTQ---------QIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQ 480 Query: 287 QFQGYGQQPTSQAP--APAFSGQPQ--------------QLPAQPPQQYQASNYPAQTYT 330 Q Y QQP SQ P P++ QPQ Q P+QPP Q + YP+Q T Sbjct: 481 QQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQST 540 Query: 331 AQ---TSQPTNYTVAPASQPGMAPSQPGAYQP-RPGFTSLPGSTMTPPP----SGPNPYA 382 Q SQP P SQP A S QP +P ++L P P S Y+ Sbjct: 541 TQQHPQSQP------PYSQP-QAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYS 593 Query: 383 RNRPPFGQGYTQPGPG 398 + R P Q +Q G Sbjct: 594 QQRFPPPQELSQDSFG 609 Score = 48.1 bits (113), Expect = 1e-05 Identities = 59/225 (26%), Positives = 80/225 (35%), Gaps = 38/225 (16%) Query: 193 SGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQ-QQA 251 S PS P +S P S++ HP QPPY+ Q Q+ YQQ Q QQ Sbjct: 519 SQQPSQPPHQQSPAPYPSQQSTTQQHPQS----QPPYSQPQAQSP------YQQQQPQQP 568 Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSG----- 306 QA QPQ Q +A Q+ P Q +G Q +S + G Sbjct: 569 APSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDM 628 Query: 307 ------QPQQLP------AQPPQQYQASNYPAQTYTAQTS---QPTNYTVAPASQPGMAP 351 +P LP P + + P + + +S + +N +P S P +P Sbjct: 629 NLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFS-PHTSP 687 Query: 352 SQPGAYQPRPGFTSLPGSTM------TPPPSGPNPYARNRPPFGQ 390 PG P P P S P + P RPP GQ Sbjct: 688 HLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQ 732 Score = 47.0 bits (110), Expect = 3e-05 Identities = 57/222 (25%), Positives = 80/222 (36%), Gaps = 39/222 (17%) Query: 195 PPSAPA----EDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQ 250 PP APA R GTP S A++++ + PP + + + A Q G M Sbjct: 223 PPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASAS-SSSSSFAQQRFGAMGGGGPSA 281 Query: 251 AGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQ-PQ 309 AG G QP A P Q T P + +QGY S P +G+ P Sbjct: 282 AGGGTPQPTATPTLNQLL-----------TSPSSARGYQGYPGGDYSGGPQDGGAGKGPA 330 Query: 310 QLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPAS------------QPGMAPSQPGAY 357 + +Q A+ A + + ++P S QP Q G Sbjct: 331 DMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKM 390 Query: 358 QPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPGY 399 +P+P + P S PPSGP QG+ PG Y Sbjct: 391 RPQPYGGTNPYSQQQGPPSGPQ----------QGHGYPGQPY 422 Score = 42.7 bits (99), Expect = 6e-04 Identities = 58/213 (27%), Positives = 76/213 (35%), Gaps = 38/213 (17%) Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQP--QQPPYTGAQTQAGQIEGQMYQQYQQ 249 + GP +P G+P S+A S S P P Q PP + +GQ + M+ Q Sbjct: 692 IRGPSPSPV----GSPASVAQSRSGPLSPAAVPGNQMPP----RPPSGQSDSIMHPSMNQ 743 Query: 250 QA-----GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT-SQAPAPA 303 + GY + PQ P Q G S Q +G Q Y Q S P Sbjct: 744 SSIAQDRGYMQRNPQMPQYSSPQPGSALSPR--QPSGGQIHTGMGSYQQNSMGSYGPQGG 801 Query: 304 FSGQPQQLPAQPPQQYQA---SNYPAQTYTAQTSQPTNYTVAPASQPGMAP--------- 351 G P QP Y A +NYP+ + P QPG+ P Sbjct: 802 QYGPQGGYPRQP--NYNALPNANYPSAGMAGGIN-PMGAGGQMHGQPGIPPYGTLPPGRM 858 Query: 352 --SQPGAYQPRPGFTSLP---GSTMTPPPSGPN 379 + G P ++P GS M PPP G N Sbjct: 859 SHASMGNRPYGPNMANMPPQVGSGMCPPPGGMN 891 Score = 38.5 bits (88), Expect = 0.011 Identities = 44/156 (28%), Positives = 55/156 (35%), Gaps = 13/156 (8%) Query: 220 PGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQ 279 PG+ P+ TGA Q + + Y QQ Q Q+ YG Q+S + Sbjct: 1292 PGIGPEGNMSTGAP-QPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPS 1350 Query: 280 TGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNY 339 P QQ Y QQ +PAP LP + S P ++ Q Sbjct: 1351 GSPFPSQQTTMYQQQQQVSSPAP--------LPRPMENRTSPSKSPF-LHSGMKMQKAGP 1401 Query: 340 TVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPP 375 V PAS AP QP R T PGS P Sbjct: 1402 PV-PASHIAPAPVQPPMI--RRDITFPPGSVEATQP 1434 Score = 32.3 bits (72), Expect = 0.78 Identities = 34/118 (28%), Positives = 42/118 (35%), Gaps = 18/118 (15%) Query: 294 QPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS- 352 QP Q P+PA SG Q Q PQ +S T T ++ P PGM+ S Sbjct: 1127 QPKIQPPSPAGSGSMQ--GPQTPQSTSSSMAEGGDLKPPTPASTPHSQIP-PLPGMSRSN 1183 Query: 353 -----------QPGAYQPRPGFTSLPG---STMTPPPSGPNPYARNRPPFGQGYTQPG 396 +Q R T PG S T G Y N+ P+G PG Sbjct: 1184 SVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG 1241 >gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] Length = 416 Score = 67.0 bits (162), Expect = 3e-11 Identities = 55/205 (26%), Positives = 73/205 (35%), Gaps = 4/205 (1%) Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253 GPPS P + + P PPG PP G + Q G+ Q G Sbjct: 49 GPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK--PQGPPPQGD 106 Query: 254 GAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPA 313 ++ P++PP +PQ G Q P P + QG Q ++ P G+PQ P Sbjct: 107 KSRSPRSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP 164 Query: 314 QPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTP 373 Q + ++S P Q N P PG P +P PG P Sbjct: 165 QGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 224 Query: 374 PPSGPNPYARNRPPFGQGYTQPGPG 398 PP G N R P G+ P G Sbjct: 225 PPQGDNKSQSARSPPGKPQGPPPQG 249 Score = 64.7 bits (156), Expect = 1e-10 Identities = 64/208 (30%), Positives = 72/208 (34%), Gaps = 20/208 (9%) Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253 GPP P + + P S SA PPG PP G Q Q Q Q G Sbjct: 214 GPPP-PGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 272 Query: 254 GAQQPQAP--PQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQL 311 Q P P PQ P G S S G Q QG G QP P P G+PQ Sbjct: 273 KPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQG-GNQPQGPPPPP---GKPQGP 328 Query: 312 PAQPPQQYQASNYPA--QTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGS 369 P Q + Q P Q Q + +P +P P Q G P Sbjct: 329 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGP-------- 380 Query: 370 TMTPPPSGPNPYARNRPPFGQGYTQPGP 397 PPP+G NP PP GQ P P Sbjct: 381 ---PPPAGGNPQQPQAPPAGQPQGPPRP 405 Score = 61.2 bits (147), Expect = 2e-09 Identities = 52/206 (25%), Positives = 71/206 (34%), Gaps = 2/206 (0%) Query: 193 SGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAG 252 S P +P G P + PP +PQ PP G G Q Q Sbjct: 108 SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 167 Query: 253 YGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLP 312 ++ ++PP +PQ G Q P P + QG Q ++ P G+PQ P Sbjct: 168 NKSRSSRSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 225 Query: 313 AQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMT 372 Q + Q++ P Q N P PG P +P PG Sbjct: 226 PQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 285 Query: 373 PPPSGPNPYARNRPPFGQGYTQPGPG 398 PPP G + +R P G+ P G Sbjct: 286 PPPQGGSKSRSSRSPPGKPQGPPPQG 311 Score = 58.2 bits (139), Expect = 1e-08 Identities = 52/201 (25%), Positives = 68/201 (33%), Gaps = 6/201 (2%) Query: 195 PPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYG 254 PP P G P + PP +PQ PP G G Q Q Sbjct: 176 PPGKP----QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 231 Query: 255 AQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQ 314 +Q ++PP +PQ G Q P P + QG Q ++ P G+PQ P Q Sbjct: 232 SQSARSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 289 Query: 315 PPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPP 374 + ++S P Q N P PG P +P PG PP Sbjct: 290 GGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 349 Query: 375 PSGPNPYARNRPPFGQGYTQP 395 P G + R P G+ P Sbjct: 350 PQGGSKSRSARSPPGKPQGPP 370 Score = 55.5 bits (132), Expect = 9e-08 Identities = 61/207 (29%), Positives = 76/207 (36%), Gaps = 11/207 (5%) Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255 PS A + G P + P +PQ PP G G Q G Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNK 88 Query: 256 QQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ--QFQGYGQQPTSQAPAPAFSGQPQQLPA 313 Q PP +PQ Q S S ++ P +PQ QG G QP P P G+PQ P Sbjct: 89 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG-GNQPQGPPPPP---GKPQGPPP 144 Query: 314 QPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPG--MAPSQPGAYQPRPGFTSLPGSTM 371 Q + Q P + Q N + + S PG P G QP+ G PG Sbjct: 145 QGGNKPQGPPPPGKP-QGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQ-GPPPPPGKPQ 202 Query: 372 TPPPSGPNPYARNRPPFGQGYTQPGPG 398 PPP G N + PP G+ P G Sbjct: 203 GPPPQGGNK-PQGPPPPGKPQGPPPQG 228 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/95 (26%), Positives = 32/95 (33%), Gaps = 1/95 (1%) Query: 294 QPTSQAPAPAF-SGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS 352 + SQ +P+ +G PQ P Q + Q P Q N P PG Sbjct: 21 EDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 80 Query: 353 QPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPP 387 P +P PG PPP G + PP Sbjct: 81 PPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 115 >gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 preproprotein [Homo sapiens] Length = 331 Score = 65.5 bits (158), Expect = 8e-11 Identities = 67/208 (32%), Positives = 76/208 (36%), Gaps = 22/208 (10%) Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253 GPP P G P S S PPG PP G Q Q Q Q G Sbjct: 131 GPP--PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGK 188 Query: 254 GAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ--QFQGYGQQPTSQAPAPAFSGQPQQL 311 Q P PP +PQ Q S S Q+ P +PQ QG G QP P P G+PQ Sbjct: 189 KPQGPP-PPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQG-GNQPQGPPPPP---GKPQGP 243 Query: 312 PAQPPQQYQASNYPA--QTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGS 369 P Q + Q P Q AQ + +P +P P Q G P Sbjct: 244 PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP-------- 295 Query: 370 TMTPPPSGPNPYARNRPPFGQGYTQPGP 397 PPP+G NP PP GQ P P Sbjct: 296 ---PPPAGGNPQQPQAPPAGQPQGPPRP 320 Score = 56.2 bits (134), Expect = 5e-08 Identities = 69/234 (29%), Positives = 92/234 (39%), Gaps = 44/234 (18%) Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253 GPP P + + G P + PPG +PQ PP G ++++ + Q Q G Sbjct: 49 GPPPPPGKPQ-GPPPQGGNKPQGPPPPG-KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGN 106 Query: 254 GAQQPQAPPQQPQ----QYG----------------IQYSASYSQQTGPQQPQ--QFQGY 291 Q P PP +PQ Q G Q S S ++ P +PQ QG Sbjct: 107 QPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG- 165 Query: 292 GQQPTSQAPAPAFSGQPQQLPAQ-------PPQQYQASNYPAQTYTAQTSQPTNYTVAPA 344 G QP P P G+PQ P Q PP + P Q +++SQ +P Sbjct: 166 GNQPQGPPPPP---GKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQ------SPP 216 Query: 345 SQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPG 398 +P P Q G QP+ G PG PPP G N + PP G+ P G Sbjct: 217 GKPQGPPPQ-GGNQPQ-GPPPPPGKPQGPPPQGGNK-PQGPPPPGKPQGPPAQG 267 Score = 52.4 bits (124), Expect = 7e-07 Identities = 49/196 (25%), Positives = 67/196 (34%), Gaps = 11/196 (5%) Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQA 251 ++G P P+ P PP +PQ PP G G Q Q Sbjct: 32 IAGNPQGPSPQGGNKPQG-------PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ- 83 Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQL 311 G ++ P++PP +PQ G Q P P + QG Q ++ P G+PQ Sbjct: 84 GDKSRSPRSPPGKPQ--GPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP 141 Query: 312 PAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTM 371 P Q + + P + Q N P PG P +P PG Sbjct: 142 PPQGDKSRSPRSPPGKP-QGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQ 200 Query: 372 TPPPSGPNPYARNRPP 387 PPP G + PP Sbjct: 201 GPPPQGDKSRSSQSPP 216 >gi|150170670 piccolo isoform 2 [Homo sapiens] Length = 4935 Score = 64.3 bits (155), Expect = 2e-10 Identities = 71/217 (32%), Positives = 86/217 (39%), Gaps = 26/217 (11%) Query: 191 QVSGPPSAPAEDR-SGTPDSIASSSSA-AHPPGV---QPQQPPYTGAQTQAGQIEGQMYQ 245 Q GP PA+ S P S A A PPGV QQP TQ + Q Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQ 423 Query: 246 QYQQQAGYGAQQP-QAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAF 304 Q Q+ A P + P QQP I +QQ GP + Q +P SQ P PA Sbjct: 424 QPGLQSPAKAPGPTKTPVQQPGPGKIP-----AQQAGPGKTSAQQTGPTKPPSQLPGPAK 478 Query: 305 SGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMA---PSQPGAYQP-- 359 Q PA+PP Q S P SQ T P QPG A P QPG+ +P Sbjct: 479 PPPQQPGPAKPPPQQPGSAKP-------PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531 Query: 360 -RPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQP 395 +PG S S P P+ P+ +P G +P Sbjct: 532 QQPG--SAKPSAQQPSPAKPSAQQSTKPVSQTGSGKP 566 Score = 53.9 bits (128), Expect = 2e-07 Identities = 72/292 (24%), Positives = 110/292 (37%), Gaps = 31/292 (10%) Query: 124 EPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMS 183 + P +P P P D + +++ + S +Q ++ + P++ + + + Sbjct: 213 QQPPKPIPKQQGPGRDPL--QQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHA 270 Query: 184 AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQM 243 L D S P + A+ G +S+ S + P +Q P AQ Q G + Q Sbjct: 271 KLPLQRD-ASRPQTKQADIVRG--ESVKPSLPSPSKPPIQQPTPGKPPAQ-QPGHEKSQP 326 Query: 244 YQQYQQQAGYGAQQPQA-------PPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT 296 G +P A PP QP + +Q GP +P Q ++P+ Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT----TKPPAQPLGPAKPPAQQTGSEKPS 382 Query: 297 SQAPAPAFSGQP---------QQLPAQPPQQYQASNYP--AQTYTAQTSQPTNYTVAPAS 345 S+ P P QP Q PA+PP Q + P Q ++ T P Sbjct: 383 SEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQ 442 Query: 346 QPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 QPG P + A Q PG TS + T PPS P PP G +P P Sbjct: 443 QPG--PGKIPAQQAGPGKTSAQQTGPTKPPS-QLPGPAKPPPQQPGPAKPPP 491 Score = 44.7 bits (104), Expect = 2e-04 Identities = 78/338 (23%), Positives = 110/338 (32%), Gaps = 93/338 (27%) Query: 122 SLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNV 181 +++PP +P P T P + + + S K S++ A P Sbjct: 348 TVKPPVQP-PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP----------- 395 Query: 182 MSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP-----PGVQPQQPPYTGA---- 232 G T Q GP P + + GTP +A P P P Q P G Sbjct: 396 --GVGKTPAQQPGPAKPPTQ-QVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 452 Query: 233 QTQAGQIEGQMY------QQYQQQAGYGAQQP---QAPPQQP-------QQYGIQYSASY 276 Q G+ Q Q A QQP + PPQQP QQ G + Sbjct: 453 QAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS--TKPP 510 Query: 277 SQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQP 336 QQ GP +P Q +P SQ P A Q PA+P Q Q++ +QT + + QP Sbjct: 511 PQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQ-QSTKPVSQTGSGKPLQP 569 Query: 337 TNYTVAPASQPGMAPSQPGA-----------------------------------YQPRP 361 TV+P+++ + P + P P Sbjct: 570 P--TVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSLCGFNPNP 627 Query: 362 GFTSLP-------------GSTMTPPPSGPNPYARNRP 386 T + G + P PS P P + P Sbjct: 628 HLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAP 665 Score = 41.2 bits (95), Expect = 0.002 Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 12/125 (9%) Query: 200 AEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI-------EGQMYQQYQQQAG 252 AEDR DS SS+ + P T QT+ Q E Q+ Sbjct: 3828 AEDRDYMSDSEVSSTRPTRIESQHGIERPRTAPQTEFSQFIPPQTQTESQLVPPTSPYTQ 3887 Query: 253 YGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLP 312 Y P P Q P Y Q + + QQT QQ Y QPT QA A S PQ P Sbjct: 3888 YQYSSPALPTQAPTSYTQQ--SHFEQQT--LYHQQVSPYQTQPTFQAVA-TMSFTPQVQP 3942 Query: 313 AQPPQ 317 PQ Sbjct: 3943 TPTPQ 3947 Score = 40.8 bits (94), Expect = 0.002 Identities = 65/291 (22%), Positives = 100/291 (34%), Gaps = 41/291 (14%) Query: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180 DSL P P + E D ++K K +T ++++S + P D + Sbjct: 727 DSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKP----DIPSSK 782 Query: 181 VMS-AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP-PGVQPQQPPYTGAQTQA-G 237 V S A T + + P++ T + ++ S A P P + + G +++ G Sbjct: 783 VQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKG 842 Query: 238 QIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTS 297 Q + Q+ ++ + P +P G P P G +PT+ Sbjct: 843 QKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKG-----------SPTPP------GPRPTA 885 Query: 298 QAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTN-----------YTVAPASQ 346 P PQQ P Q + S A SQPT + + SQ Sbjct: 886 GQTVPT----PQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQ 941 Query: 347 PGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 S G QP P S PG+ M P+ P PP G P P Sbjct: 942 ASNLISTAG--QPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAP 990 Score = 37.0 bits (84), Expect = 0.032 Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 13/125 (10%) Query: 278 QQTGPQQPQQFQGYGQQPTSQ--APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQ 335 QQ P+ + QG G+ P Q P S QP+++ +QPP + P Q T QT Sbjct: 212 QQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQ--TPQTDH 269 Query: 336 PTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPF---GQGY 392 AS+P Q + SLP S PP P P +PP G Sbjct: 270 AKLPLQRDASRP--QTKQADIVRGESVKPSLP-SPSKPPIQQPTP---GKPPAQQPGHEK 323 Query: 393 TQPGP 397 +QPGP Sbjct: 324 SQPGP 328 Score = 31.2 bits (69), Expect = 1.7 Identities = 45/213 (21%), Positives = 74/213 (34%), Gaps = 28/213 (13%) Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255 P S PD+ + PPG +P Q+ + + Q +++ G Sbjct: 855 PKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQS-RRFSLNLGSIT 913 Query: 256 QQPQAPPQQPQQ--------YGIQYSASYSQ------------QTGPQQP-QQFQGYGQQ 294 P++ P PQ+ +G + S Q+GP P +Q Q Sbjct: 914 DAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQP 973 Query: 295 PTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP 354 PTSQ P P +GQ PA+ + + PA A+ +P AP + +P Sbjct: 974 PTSQGP-PKSTGQAPPAPAKSIPVKKETKAPA----AEKLEP-KAEQAPTVKRTETEKKP 1027 Query: 355 GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPP 387 + T+ P + P +P + P Sbjct: 1028 PPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCP 1060 Score = 28.9 bits (63), Expect = 8.6 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 7/97 (7%) Query: 293 QQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS 352 ++ S F P + A P ++ ++ Y T +P + P+ P ++ S Sbjct: 2329 ERTKSSLSETVFDHPPSSVIALPMKEQLSTTYFTSGETFGQEKPASQL--PSGSPSVS-S 2385 Query: 353 QPGAYQPRPGF--TSLPGSTMTPPPSGPNPYARNRPP 387 P +PRP F +SL S PPP P P PP Sbjct: 2386 LPA--KPRPFFRSSSLDISAQPPPPPPPPPPPPPPPP 2420 >gi|150378539 piccolo isoform 1 [Homo sapiens] Length = 5142 Score = 64.3 bits (155), Expect = 2e-10 Identities = 71/217 (32%), Positives = 86/217 (39%), Gaps = 26/217 (11%) Query: 191 QVSGPPSAPAEDR-SGTPDSIASSSSA-AHPPGV---QPQQPPYTGAQTQAGQIEGQMYQ 245 Q GP PA+ S P S A A PPGV QQP TQ + Q Sbjct: 364 QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQ 423 Query: 246 QYQQQAGYGAQQP-QAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAF 304 Q Q+ A P + P QQP I +QQ GP + Q +P SQ P PA Sbjct: 424 QPGLQSPAKAPGPTKTPVQQPGPGKIP-----AQQAGPGKTSAQQTGPTKPPSQLPGPAK 478 Query: 305 SGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMA---PSQPGAYQP-- 359 Q PA+PP Q S P SQ T P QPG A P QPG+ +P Sbjct: 479 PPPQQPGPAKPPPQQPGSAKP-------PSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS 531 Query: 360 -RPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQP 395 +PG S S P P+ P+ +P G +P Sbjct: 532 QQPG--SAKPSAQQPSPAKPSAQQSTKPVSQTGSGKP 566 Score = 53.9 bits (128), Expect = 2e-07 Identities = 72/292 (24%), Positives = 110/292 (37%), Gaps = 31/292 (10%) Query: 124 EPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMS 183 + P +P P P D + +++ + S +Q ++ + P++ + + + Sbjct: 213 QQPPKPIPKQQGPGRDPL--QQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHA 270 Query: 184 AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQM 243 L D S P + A+ G +S+ S + P +Q P AQ Q G + Q Sbjct: 271 KLPLQRD-ASRPQTKQADIVRG--ESVKPSLPSPSKPPIQQPTPGKPPAQ-QPGHEKSQP 326 Query: 244 YQQYQQQAGYGAQQPQA-------PPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT 296 G +P A PP QP + +Q GP +P Q ++P+ Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGT----TKPPAQPLGPAKPPAQQTGSEKPS 382 Query: 297 SQAPAPAFSGQP---------QQLPAQPPQQYQASNYP--AQTYTAQTSQPTNYTVAPAS 345 S+ P P QP Q PA+PP Q + P Q ++ T P Sbjct: 383 SEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQ 442 Query: 346 QPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 QPG P + A Q PG TS + T PPS P PP G +P P Sbjct: 443 QPG--PGKIPAQQAGPGKTSAQQTGPTKPPS-QLPGPAKPPPQQPGPAKPPP 491 Score = 44.7 bits (104), Expect = 2e-04 Identities = 78/338 (23%), Positives = 110/338 (32%), Gaps = 93/338 (27%) Query: 122 SLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNV 181 +++PP +P P T P + + + S K S++ A P Sbjct: 348 TVKPPVQP-PGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP----------- 395 Query: 182 MSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP-----PGVQPQQPPYTGA---- 232 G T Q GP P + + GTP +A P P P Q P G Sbjct: 396 --GVGKTPAQQPGPAKPPTQ-QVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQ 452 Query: 233 QTQAGQIEGQMY------QQYQQQAGYGAQQP---QAPPQQP-------QQYGIQYSASY 276 Q G+ Q Q A QQP + PPQQP QQ G + Sbjct: 453 QAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGS--TKPP 510 Query: 277 SQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQP 336 QQ GP +P Q +P SQ P A Q PA+P Q Q++ +QT + + QP Sbjct: 511 PQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQ-QSTKPVSQTGSGKPLQP 569 Query: 337 TNYTVAPASQPGMAPSQPGA-----------------------------------YQPRP 361 TV+P+++ + P + P P Sbjct: 570 P--TVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSLCGFNPNP 627 Query: 362 GFTSLP-------------GSTMTPPPSGPNPYARNRP 386 T + G + P PS P P + P Sbjct: 628 HLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAP 665 Score = 41.2 bits (95), Expect = 0.002 Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 12/125 (9%) Query: 200 AEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI-------EGQMYQQYQQQAG 252 AEDR DS SS+ + P T QT+ Q E Q+ Sbjct: 3828 AEDRDYMSDSEVSSTRPTRIESQHGIERPRTAPQTEFSQFIPPQTQTESQLVPPTSPYTQ 3887 Query: 253 YGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLP 312 Y P P Q P Y Q + + QQT QQ Y QPT QA A S PQ P Sbjct: 3888 YQYSSPALPTQAPTSYTQQ--SHFEQQT--LYHQQVSPYQTQPTFQAVA-TMSFTPQVQP 3942 Query: 313 AQPPQ 317 PQ Sbjct: 3943 TPTPQ 3947 Score = 40.8 bits (94), Expect = 0.002 Identities = 65/291 (22%), Positives = 100/291 (34%), Gaps = 41/291 (14%) Query: 121 DSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKN 180 DSL P P + E D ++K K +T ++++S + P D + Sbjct: 727 DSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKP----DIPSSK 782 Query: 181 VMS-AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP-PGVQPQQPPYTGAQTQA-G 237 V S A T + + P++ T + ++ S A P P + + G +++ G Sbjct: 783 VQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKG 842 Query: 238 QIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTS 297 Q + Q+ ++ + P +P G P P G +PT+ Sbjct: 843 QKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKG-----------SPTPP------GPRPTA 885 Query: 298 QAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTN-----------YTVAPASQ 346 P PQQ P Q + S A SQPT + + SQ Sbjct: 886 GQTVPT----PQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQ 941 Query: 347 PGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 S G QP P S PG+ M P+ P PP G P P Sbjct: 942 ASNLISTAG--QPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAP 990 Score = 37.0 bits (84), Expect = 0.032 Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 13/125 (10%) Query: 278 QQTGPQQPQQFQGYGQQPTSQ--APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQ 335 QQ P+ + QG G+ P Q P S QP+++ +QPP + P Q T QT Sbjct: 212 QQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQ--TPQTDH 269 Query: 336 PTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPF---GQGY 392 AS+P Q + SLP S PP P P +PP G Sbjct: 270 AKLPLQRDASRP--QTKQADIVRGESVKPSLP-SPSKPPIQQPTP---GKPPAQQPGHEK 323 Query: 393 TQPGP 397 +QPGP Sbjct: 324 SQPGP 328 Score = 31.2 bits (69), Expect = 1.7 Identities = 45/213 (21%), Positives = 74/213 (34%), Gaps = 28/213 (13%) Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255 P S PD+ + PPG +P Q+ + + Q +++ G Sbjct: 855 PKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQS-RRFSLNLGSIT 913 Query: 256 QQPQAPPQQPQQ--------YGIQYSASYSQ------------QTGPQQP-QQFQGYGQQ 294 P++ P PQ+ +G + S Q+GP P +Q Q Sbjct: 914 DAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQP 973 Query: 295 PTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP 354 PTSQ P P +GQ PA+ + + PA A+ +P AP + +P Sbjct: 974 PTSQGP-PKSTGQAPPAPAKSIPVKKETKAPA----AEKLEP-KAEQAPTVKRTETEKKP 1027 Query: 355 GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPP 387 + T+ P + P +P + P Sbjct: 1028 PPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCP 1060 Score = 28.9 bits (63), Expect = 8.6 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 7/97 (7%) Query: 293 QQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPS 352 ++ S F P + A P ++ ++ Y T +P + P+ P ++ S Sbjct: 2329 ERTKSSLSETVFDHPPSSVIALPMKEQLSTTYFTSGETFGQEKPASQL--PSGSPSVS-S 2385 Query: 353 QPGAYQPRPGF--TSLPGSTMTPPPSGPNPYARNRPP 387 P +PRP F +SL S PPP P P PP Sbjct: 2386 LPA--KPRPFFRSSSLDISAQPPPPPPPPPPPPPPPP 2420 >gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo sapiens] Length = 309 Score = 64.3 bits (155), Expect = 2e-10 Identities = 62/228 (27%), Positives = 76/228 (33%), Gaps = 20/228 (8%) Query: 190 DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQA-----GQIEGQMY 244 +Q GPP P + P S PG QPP G Q+Q G+ EG Sbjct: 66 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPP 125 Query: 245 QQYQQQAG-------------YGAQQPQAPPQQP-QQYGIQYSASYSQQTGPQQPQQFQG 290 Q Q G G Q Q PP +P + G Q P P + +G Sbjct: 126 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEG 185 Query: 291 YGQQPTSQAPAPA-FSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGM 349 Q +Q+ P G+P+ P Q Q Q SQ N P PG Sbjct: 186 PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGK 245 Query: 350 APSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 P +P PG PPP G NP PP G+ P P Sbjct: 246 PQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPP 293 Score = 48.9 bits (115), Expect = 8e-06 Identities = 65/232 (28%), Positives = 77/232 (33%), Gaps = 24/232 (10%) Query: 183 SAFGLTDD--QVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQA---- 236 SA L +D Q P + P PPG +PP G Q+Q Sbjct: 15 SAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPR 74 Query: 237 -GQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQP 295 G+ EG Q Q G +P P QP Q G Q + P+ P QG Q Sbjct: 75 PGKPEGPPPQGGNQSQG-PPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPP-QGGNQ-- 130 Query: 296 TSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP- 354 SQ P P G+P+ P Q Q Q Q N + P PG P Sbjct: 131 -SQGPPPR-PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPP 188 Query: 355 -GAYQPRPGFTSLPGSTMTPPPSG--------PNPYARNRPPFGQGYTQPGP 397 G Q + G PG PPP G P P PP G GP Sbjct: 189 QGGNQSQ-GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGP 239 Score = 43.1 bits (100), Expect = 4e-04 Identities = 37/128 (28%), Positives = 45/128 (35%), Gaps = 3/128 (2%) Query: 190 DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQ 249 +Q GPP P + P S PG PP G Q+Q + Sbjct: 171 NQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPS 230 Query: 250 QAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQ 309 Q G Q P P +PQ Q + P +PQ G P P PA G+PQ Sbjct: 231 QGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPA--GKPQ 288 Query: 310 QLPAQPPQ 317 P PPQ Sbjct: 289 G-PPPPPQ 295 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 60.8 bits (146), Expect = 2e-09 Identities = 77/313 (24%), Positives = 103/313 (32%), Gaps = 62/313 (19%) Query: 129 PGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMS------AFDP---LKNQDEINK 179 P P P + + S+S SS S AS + +F P L ++ K Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPK 426 Query: 180 NVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI 239 + GPP P R ++S AHP PP TGAQ+ A Sbjct: 427 YTQPSLPSQAVWSQGPPPPPPYGR-------LLANSNAHPGPF----PPSTGAQSTAHPP 475 Query: 240 EGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQF----------- 288 + +QQQ QQ Q QQ Q +G +GP P F Sbjct: 476 VSTHHHHHQQQQQQQQQQQQQQQQQQQHHG---------NSGPPPPGAFPHPLEGGSSHH 526 Query: 289 -QGYGQQPTSQAPAPAFSGQPQQLP---AQPPQQYQASNYPAQTYTAQTSQPTNYTVAPA 344 Y P+ + P G P LP +Q N P + ++ +S T+ P Sbjct: 527 AHPYAMSPSLGSLRPYPPG-PAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPC 585 Query: 345 SQPGMAPSQPGAYQPRP-----------------GFTSLPGSTMTPPPSGPNPYARNRPP 387 S P + GA P P S P T P GP PY + P Sbjct: 586 SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPS 645 Query: 388 FGQGYTQPGPGYR 400 G T PGY+ Sbjct: 646 PGAYKTATPPGYK 658 Score = 42.0 bits (97), Expect = 0.001 Identities = 53/223 (23%), Positives = 78/223 (34%), Gaps = 36/223 (16%) Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQA 251 V GP TP S++SS ++ PP P P + G A Sbjct: 244 VGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTP-----------VGGGNLPSAPPPA 292 Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTG--------PQQPQQFQGYGQQPTSQAPAPA 303 + P PP P + +++ G P QG G P P Sbjct: 293 NFPHVTPNLPP-PPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPT 351 Query: 304 FSGQPQQLP------AQPPQQYQASNYPAQTYTAQTSQPTNYTVA---PASQPGMAPSQP 354 + P LP PP ++ S+ + + A +S ++ + A PASQ PS P Sbjct: 352 LAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQ--ALPSYP 409 Query: 355 GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 ++ P TSL S PP P ++ + QG P P Sbjct: 410 HSFPPP---TSL--SVSNQPPKYTQPSLPSQAVWSQGPPPPPP 447 Score = 35.0 bits (79), Expect = 0.12 Identities = 45/194 (23%), Positives = 64/194 (32%), Gaps = 36/194 (18%) Query: 193 SGPPSAPAEDRSGTPDSIASSS-SAAHPPGVQPQQ------PPYTGAQTQAGQIEGQMYQ 245 +GP P S + S + S +HP Q Q PP T + + + Sbjct: 561 AGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIAT 620 Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTG------PQQPQQFQ-----GY-GQ 293 AGY P PP YG + + + +T P P F+ GY G Sbjct: 621 VASSPAGYKTASPPGPPP----YGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGT 676 Query: 294 QPTSQ-----------APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVA 342 P + P P P LP+ PP ++ P + T +P Sbjct: 677 SPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYET 736 Query: 343 PAS--QPGMAPSQP 354 P S P +PS P Sbjct: 737 PESPVPPARSPSPP 750 Score = 32.3 bits (72), Expect = 0.78 Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 22/143 (15%) Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253 GPP P R+ +P + +++ PPG +P PP T G Y+ AG Sbjct: 635 GPP--PYGKRAPSPGAYKTAT----PPGYKPGSPPSFRTGTPPG------YRGTSPPAGP 682 Query: 254 GAQQPQAP--------PQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305 G +P +P P P + +GP P Q+P + P Sbjct: 683 GTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGP--PLSATQIKQEPAEEYETPESP 740 Query: 306 GQPQQLPAQPPQQYQASNYPAQT 328 P + P+ PP+ ++ +Q+ Sbjct: 741 VPPARSPSPPPKVVDVPSHASQS 763 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 60.8 bits (146), Expect = 2e-09 Identities = 77/313 (24%), Positives = 103/313 (32%), Gaps = 62/313 (19%) Query: 129 PGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMS------AFDP---LKNQDEINK 179 P P P + + S+S SS S AS + +F P L ++ K Sbjct: 367 PAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPK 426 Query: 180 NVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQI 239 + GPP P R ++S AHP PP TGAQ+ A Sbjct: 427 YTQPSLPSQAVWSQGPPPPPPYGR-------LLANSNAHPGPF----PPSTGAQSTAHPP 475 Query: 240 EGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQF----------- 288 + +QQQ QQ Q QQ Q +G +GP P F Sbjct: 476 VSTHHHHHQQQQQQQQQQQQQQQQQQQHHG---------NSGPPPPGAFPHPLEGGSSHH 526 Query: 289 -QGYGQQPTSQAPAPAFSGQPQQLP---AQPPQQYQASNYPAQTYTAQTSQPTNYTVAPA 344 Y P+ + P G P LP +Q N P + ++ +S T+ P Sbjct: 527 AHPYAMSPSLGSLRPYPPG-PAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPC 585 Query: 345 SQPGMAPSQPGAYQPRP-----------------GFTSLPGSTMTPPPSGPNPYARNRPP 387 S P + GA P P S P T P GP PY + P Sbjct: 586 SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPS 645 Query: 388 FGQGYTQPGPGYR 400 G T PGY+ Sbjct: 646 PGAYKTATPPGYK 658 Score = 42.0 bits (97), Expect = 0.001 Identities = 53/223 (23%), Positives = 78/223 (34%), Gaps = 36/223 (16%) Query: 192 VSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQA 251 V GP TP S++SS ++ PP P P + G A Sbjct: 244 VGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTP-----------VGGGNLPSAPPPA 292 Query: 252 GYGAQQPQAPPQQPQQYGIQYSASYSQQTG--------PQQPQQFQGYGQQPTSQAPAPA 303 + P PP P + +++ G P QG G P P Sbjct: 293 NFPHVTPNLPP-PPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPT 351 Query: 304 FSGQPQQLP------AQPPQQYQASNYPAQTYTAQTSQPTNYTVA---PASQPGMAPSQP 354 + P LP PP ++ S+ + + A +S ++ + A PASQ PS P Sbjct: 352 LAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQ--ALPSYP 409 Query: 355 GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 ++ P TSL S PP P ++ + QG P P Sbjct: 410 HSFPPP---TSL--SVSNQPPKYTQPSLPSQAVWSQGPPPPPP 447 Score = 35.0 bits (79), Expect = 0.12 Identities = 45/194 (23%), Positives = 64/194 (32%), Gaps = 36/194 (18%) Query: 193 SGPPSAPAEDRSGTPDSIASSS-SAAHPPGVQPQQ------PPYTGAQTQAGQIEGQMYQ 245 +GP P S + S + S +HP Q Q PP T + + + Sbjct: 561 AGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIAT 620 Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTG------PQQPQQFQ-----GY-GQ 293 AGY P PP YG + + + +T P P F+ GY G Sbjct: 621 VASSPAGYKTASPPGPPP----YGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGT 676 Query: 294 QPTSQ-----------APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVA 342 P + P P P LP+ PP ++ P + T +P Sbjct: 677 SPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYET 736 Query: 343 PAS--QPGMAPSQP 354 P S P +PS P Sbjct: 737 PESPVPPARSPSPP 750 Score = 32.3 bits (72), Expect = 0.78 Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 22/143 (15%) Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253 GPP P R+ +P + +++ PPG +P PP T G Y+ AG Sbjct: 635 GPP--PYGKRAPSPGAYKTAT----PPGYKPGSPPSFRTGTPPG------YRGTSPPAGP 682 Query: 254 GAQQPQAP--------PQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305 G +P +P P P + +GP P Q+P + P Sbjct: 683 GTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGP--PLSATQIKQEPAEEYETPESP 740 Query: 306 GQPQQLPAQPPQQYQASNYPAQT 328 P + P+ PP+ ++ +Q+ Sbjct: 741 VPPARSPSPPPKVVDVPSHASQS 763 >gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo sapiens] Length = 247 Score = 58.9 bits (141), Expect = 8e-09 Identities = 54/208 (25%), Positives = 71/208 (34%), Gaps = 22/208 (10%) Query: 190 DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQ 249 +Q PP P + + P S PPG +PP G Q+Q Sbjct: 45 NQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPP----------- 93 Query: 250 QAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQ 309 P P + P Q G Q + P++P QG G Q P P G+P+ Sbjct: 94 ------PHPGKPERPPPQGGNQSQGTPPPPGKPERPPP-QG-GNQSHRPPPPP---GKPE 142 Query: 310 QLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGS 369 + P Q Q Q Q N + + S PG P +P PG Sbjct: 143 RPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGK 202 Query: 370 TMTPPPSGPNPYARNRPPFGQGYTQPGP 397 PPP+G NP PP G+ P P Sbjct: 203 PQGPPPAGGNPQQPQAPPAGKPQGPPPP 230 Score = 43.5 bits (101), Expect = 3e-04 Identities = 38/121 (31%), Positives = 47/121 (38%), Gaps = 7/121 (5%) Query: 280 TGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNY 339 +G + ++ QG G QP P P G+PQ P Q Q Q P + Q N Sbjct: 33 SGKPEGRRPQG-GNQPQRPPPPP---GKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQ 88 Query: 340 TVAPASQPGMAPSQP--GAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 + P PG P G Q + G PG PPP G N R PP G+ P Sbjct: 89 SQGPPPHPGKPERPPPQGGNQSQ-GTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQ 147 Query: 398 G 398 G Sbjct: 148 G 148 Score = 42.4 bits (98), Expect = 8e-04 Identities = 42/146 (28%), Positives = 54/146 (36%), Gaps = 17/146 (11%) Query: 190 DQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQA-----GQIEGQMY 244 +Q G P P + P S PPG + PP G Q+Q G+ EG Sbjct: 108 NQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPP 167 Query: 245 QQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAF 304 Q+ + A+ P PQ P Q PQ P G QQP QAP Sbjct: 168 QEGNKSRS--ARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQP--QAPP--- 220 Query: 305 SGQPQQLP-----AQPPQQYQASNYP 325 +G+PQ P +PP+ Q P Sbjct: 221 AGKPQGPPPPPQGGRPPRPAQGQQPP 246 >gi|19924099 synapsin I isoform Ia [Homo sapiens] Length = 705 Score = 57.8 bits (138), Expect = 2e-08 Identities = 69/263 (26%), Positives = 98/263 (37%), Gaps = 27/263 (10%) Query: 159 QVMAASMSAFDPLKNQD-----EINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASS 213 +V+ +SM +++D E+ N M+ Q P + ++ +P ++ Sbjct: 386 EVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHGQTPSPGALPLG 445 Query: 214 SSAAHPPGVQP--QQPPYTGAQTQAG---QIEGQMYQQY---QQQAGYGAQQPQAPPQQP 265 + P P Q+PP G Q G Q +G QQ Q Q P A P Sbjct: 446 RQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLP 505 Query: 266 QQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYP 325 Q+ SA + P Q QG +P + P + +P PA P Q QA Sbjct: 506 QRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP---PASPSPQRQAGPPQ 562 Query: 326 A--QTYTAQTSQPTNYTVAPASQPGMAPSQ--PG-------AYQPRPGFTSLPGSTMTPP 374 A QT + + P P Q P Q PG A Q P + P +T P Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPR 622 Query: 375 PSGPNPYARNRPPFGQGYTQPGP 397 PSGP P R +P Q +Q P Sbjct: 623 PSGPGPAGRPKPQLAQKPSQDVP 645 Score = 50.8 bits (120), Expect = 2e-06 Identities = 48/151 (31%), Positives = 59/151 (39%), Gaps = 10/151 (6%) Query: 255 AQQPQAPPQQ---PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQL 311 +QQP PP Q P Q G Q+ GP Q+ GQQ S PA S PQ+L Sbjct: 449 SQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRL 508 Query: 312 PAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTM 371 P+ Q ++ A Q Q P + P P + Q + G P +T Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAG---PPQATR 565 Query: 372 TPPPSGP-NPYARNRPPFG---QGYTQPGPG 398 SGP P A PP G QG Q PG Sbjct: 566 QTSVSGPAPPKASGAPPGGQQRQGPPQKPPG 596 Score = 43.9 bits (102), Expect = 3e-04 Identities = 57/217 (26%), Positives = 74/217 (34%), Gaps = 51/217 (23%) Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253 GPP+ S P + S +SA PQQP A A +GQ Q G Sbjct: 497 GPPAG-----SPLPQRLPSPTSA-------PQQP----ASQAAPPTQGQGRQSRPVAGGP 540 Query: 254 GAQQPQAPPQQPQQYGIQYSASYSQQTGPQQP-QQFQGYGQQPTSQAPAPAFSGQPQQLP 312 GA PP P S +Q GP Q +Q G P + AP Q Q P Sbjct: 541 GAPPAARPPASP---------SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPP 591 Query: 313 AQPP------QQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPG-AYQPRPGFTS 365 +PP +Q + +T T QP PS PG A +P+P Sbjct: 592 QKPPGPAGPTRQASQAGPVPRTGPPTTQQP-------------RPSGPGPAGRPKPQLAQ 638 Query: 366 LPGSTMTPPPSG-----PNPYARNRPPFGQGYTQPGP 397 P + PP + P+P + P P Sbjct: 639 KPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFNLPEP 675 >gi|19924097 synapsin I isoform Ib [Homo sapiens] Length = 669 Score = 57.8 bits (138), Expect = 2e-08 Identities = 69/263 (26%), Positives = 98/263 (37%), Gaps = 27/263 (10%) Query: 159 QVMAASMSAFDPLKNQD-----EINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASS 213 +V+ +SM +++D E+ N M+ Q P + ++ +P ++ Sbjct: 386 EVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHGQTPSPGALPLG 445 Query: 214 SSAAHPPGVQP--QQPPYTGAQTQAG---QIEGQMYQQY---QQQAGYGAQQPQAPPQQP 265 + P P Q+PP G Q G Q +G QQ Q Q P A P Sbjct: 446 RQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLP 505 Query: 266 QQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYP 325 Q+ SA + P Q QG +P + P + +P PA P Q QA Sbjct: 506 QRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARP---PASPSPQRQAGPPQ 562 Query: 326 A--QTYTAQTSQPTNYTVAPASQPGMAPSQ--PG-------AYQPRPGFTSLPGSTMTPP 374 A QT + + P P Q P Q PG A Q P + P +T P Sbjct: 563 ATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPR 622 Query: 375 PSGPNPYARNRPPFGQGYTQPGP 397 PSGP P R +P Q +Q P Sbjct: 623 PSGPGPAGRPKPQLAQKPSQDVP 645 Score = 50.8 bits (120), Expect = 2e-06 Identities = 48/151 (31%), Positives = 59/151 (39%), Gaps = 10/151 (6%) Query: 255 AQQPQAPPQQ---PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQL 311 +QQP PP Q P Q G Q+ GP Q+ GQQ S PA S PQ+L Sbjct: 449 SQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRL 508 Query: 312 PAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTM 371 P+ Q ++ A Q Q P + P P + Q + G P +T Sbjct: 509 PSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAG---PPQATR 565 Query: 372 TPPPSGP-NPYARNRPPFG---QGYTQPGPG 398 SGP P A PP G QG Q PG Sbjct: 566 QTSVSGPAPPKASGAPPGGQQRQGPPQKPPG 596 Score = 43.5 bits (101), Expect = 3e-04 Identities = 57/210 (27%), Positives = 74/210 (35%), Gaps = 51/210 (24%) Query: 194 GPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGY 253 GPP+ S P + S +SA PQQP A A +GQ Q G Sbjct: 497 GPPAG-----SPLPQRLPSPTSA-------PQQP----ASQAAPPTQGQGRQSRPVAGGP 540 Query: 254 GAQQPQAPPQQPQQYGIQYSASYSQQTGPQQP-QQFQGYGQQPTSQAPAPAFSGQPQQLP 312 GA PP P S +Q GP Q +Q G P + AP Q Q P Sbjct: 541 GAPPAARPPASP---------SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPP 591 Query: 313 AQPP------QQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPG-AYQPRPGFTS 365 +PP +Q + +T T QP PS PG A +P+P Sbjct: 592 QKPPGPAGPTRQASQAGPVPRTGPPTTQQP-------------RPSGPGPAGRPKPQLAQ 638 Query: 366 LPGSTMTPPPSG-----PNPYARNRPPFGQ 390 P + PP + P+P + P Q Sbjct: 639 KPSQDVPPPATAAAGGPPHPQLKASPAQAQ 668 >gi|33286444 mastermind-like 2 [Homo sapiens] Length = 1156 Score = 57.0 bits (136), Expect = 3e-08 Identities = 79/279 (28%), Positives = 101/279 (36%), Gaps = 45/279 (16%) Query: 145 EEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFG------------------ 186 +EK S S G+Q+ ++ M Q ++ N M G Sbjct: 477 QEKIPSPSFGQQTFSPQSSPMPGVAGGSGQSKVMANYMYKAGPSAQGGHLDVLMQQKPQD 536 Query: 187 LTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHP--PGVQPQQ-PPYTGAQTQAGQIEGQM 243 L+ ++ P A + T +S A+ P V P Q P TQ Q + Q Sbjct: 537 LSRSFINNPHPAMEPRQGNTKPLFHFNSDQANQQMPSVLPSQNKPSLLHYTQQQQQQQQQ 596 Query: 244 YQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPA 303 QQ QQQ QQ Q QQ QQ Q +S S Q QQ QQ Q Q Sbjct: 597 QQQQQQQ-----QQQQQQQQQQQQQQQQQQSSISAQ---QQQQQQSSISAQQQQQQQQQQ 648 Query: 304 FSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAP----------ASQPGMAPSQ 353 Q QQ Q QQ Q S+ PAQ+ SQP + P +QP Sbjct: 649 QQQQQQQQQQQQQQQQQPSSQPAQSL---PSQPLLRSPLPLQQKLLLQQMQNQPIAGMGY 705 Query: 354 PGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGY 392 + Q R S+ G P PS PNP + P G GY Sbjct: 706 QVSQQQRQDQHSVVGQNTGPSPS-PNPC--SNPNTGSGY 741 Score = 31.2 bits (69), Expect = 1.7 Identities = 35/141 (24%), Positives = 51/141 (36%), Gaps = 18/141 (12%) Query: 212 SSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQ--PQAPPQQPQQYG 269 S S PP P A + + I Q Q Q G GA + P Q Sbjct: 377 SGSPQLRPPSAGPAFSMANSALSTSSPIPSVPQSQAQPQTGSGASRALPSWQEVSHAQQL 436 Query: 270 IQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTY 329 Q +A+ Q QQ QQ QPT+ + P+ +G P + P+ ++ Sbjct: 437 KQIAANRQQHARMQQHQQ----QHQPTNWSALPSSAG-------PSPGPFGQEKIPSPSF 485 Query: 330 TAQTSQPTNYTVAPASQPGMA 350 QT P + + PG+A Sbjct: 486 GQQTFSPQS-----SPMPGVA 501 >gi|162951884 R3H domain containing 2 [Homo sapiens] Length = 976 Score = 57.0 bits (136), Expect = 3e-08 Identities = 62/232 (26%), Positives = 81/232 (34%), Gaps = 46/232 (19%) Query: 204 SGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIE------------GQMYQQYQQQA 251 +G P ++ S+++H P Q PP G QI+ Q Y+ Sbjct: 482 TGQPLPTSNYSTSSHAPPTQQVLPPQ-GYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPV 540 Query: 252 GYGAQQPQAPPQQPQQYGI------QYSASYSQQTGPQQPQ--------------QFQG- 290 Y Q+ Q PQ QQ G+ Q A+Y G QQPQ Q QG Sbjct: 541 AYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGL 600 Query: 291 ---YGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQP 347 Y P+ Q P + S Q P Q P S Q P Y++ P Sbjct: 601 VVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQ-SVQGGLPAAGVPVYYSMIP---- 655 Query: 348 GMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYA-RNRPPFGQGYTQPGPG 398 P+Q P GF PGS P P+P + P G + GPG Sbjct: 656 ---PAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPG 704 Score = 43.1 bits (100), Expect = 4e-04 Identities = 59/227 (25%), Positives = 76/227 (33%), Gaps = 63/227 (27%) Query: 195 PPSAPAEDRSGTP-----DSIASSSSAA----HPPGVQPQQPPYTGAQTQAGQIEGQMYQ 245 PP A SG DSI SS + PG+ P T + + G + Sbjct: 342 PPVTKASSFSGISILTRGDSIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPC 401 Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAP--- 302 QQQ QQ A P PQQ + SQ P +Q +++A P Sbjct: 402 TAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAA 461 Query: 303 ------------------AFSGQP----------------QQLP----AQPPQQYQASNY 324 A +GQP Q LP QPPQQ Q S Y Sbjct: 462 LFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYY 521 Query: 325 PAQTY--TAQTSQPTNYTVA-----------PASQPGMAPSQPGAYQ 358 P Y + Q +P ++ VA P+ QPG+ P P Q Sbjct: 522 PPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQ 568 >gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] Length = 788 Score = 56.2 bits (134), Expect = 5e-08 Identities = 74/257 (28%), Positives = 86/257 (33%), Gaps = 36/257 (14%) Query: 172 KNQDEINKNVMSAFGLTDDQVSG------PPSAPAEDRSGTPDSIAS----SSSAAHPPG 221 K+Q ++ + + LT +G PP P + G A S S PPG Sbjct: 73 KSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPG 132 Query: 222 VQPQQP----------PYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQ 271 P P T Q Q ++ Q QQ QQ A Q Q QQ QQ+ Q Sbjct: 133 TSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQ 192 Query: 272 YSASYSQ-QTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQ-------ASN 323 SA Q Q QQ QQ Q QQ Q Q QQ Q QQ Q Sbjct: 193 QSAMQQQFQAVVQQQQQLQ---QQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQ 249 Query: 324 YPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGST---MTPPPSGPNP 380 Q Q Q P QP M QP Q P T PP P Sbjct: 250 QQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPP 309 Query: 381 YARNRPPF--GQGYTQP 395 A+N+P Q TQP Sbjct: 310 VAQNQPSQLPPQSQTQP 326 Score = 48.9 bits (115), Expect = 8e-06 Identities = 53/159 (33%), Positives = 60/159 (37%), Gaps = 17/159 (10%) Query: 223 QPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGP 282 Q QQ AQ Q Q + Q QQ QQQ A Q Q P QQP +Q Q P Sbjct: 233 QQQQQLQRIAQLQLQQQQQQQQQQQQQQQQ--ALQAQPPIQQPP---MQQPQPPPSQALP 287 Query: 283 QQPQQFQ--GYGQQPTSQAPAPAFSGQPQQLPAQ---PPQQYQASNYPAQTYTAQTSQPT 337 QQ QQ + Q P P QP QLP Q P QA P Q T P Sbjct: 288 QQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQ--MLYTQPPL 345 Query: 338 NYTVAP--ASQPGMAPSQPGAYQPRPGFTSLPGSTMTPP 374 + AP QP P QP Q + + + M P Sbjct: 346 KFVRAPMVVQQP---PVQPQVQQQQTAVQTAQAAQMVAP 381 Score = 43.5 bits (101), Expect = 3e-04 Identities = 61/234 (26%), Positives = 86/234 (36%), Gaps = 27/234 (11%) Query: 172 KNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTG 231 +NQ +I + + Q+ + + ++ + PP QPQ PP Sbjct: 226 QNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPP--- 282 Query: 232 AQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGP--QQPQQFQ 289 +Q Q++ QM+ Q QQP QP Q Q QT P Q Q Sbjct: 283 SQALPQQLQ-QMHHTQHHQPPPQPQQPPVAQNQPSQLPPQ------SQTQPLVSQAQALP 335 Query: 290 G---YGQQPTSQAPAPAFSGQPQQLPAQPP-QQYQASNYPAQTYTAQTSQPTNYTVAPA- 344 G Y Q P AP QP P QP QQ Q + AQ AQ P + A Sbjct: 336 GQMLYTQPPLKFVRAPMVVQQP---PVQPQVQQQQTAVQTAQ--AAQMVAPGVQMITEAL 390 Query: 345 SQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGPG 398 +Q GM + P +++P S++ P G P A+ + P PG Sbjct: 391 AQGGM--HIRARFPPTTAVSAIPSSSI---PLGRQPMAQVSQSSLPMLSSPSPG 439 Score = 40.8 bits (94), Expect = 0.002 Identities = 58/228 (25%), Positives = 79/228 (34%), Gaps = 71/228 (31%) Query: 218 HPPGVQPQQPPYTGAQ--------------TQAGQIEGQMYQQYQQ------QAGYGAQQ 257 H P QPQQPP Q +QA + GQM Y Q +A QQ Sbjct: 299 HQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQML--YTQPPLKFVRAPMVVQQ 356 Query: 258 PQAPPQQPQQYGIQYSASYSQQTGPQQ---------------------------PQQFQG 290 P PQ QQ +A +Q P P Sbjct: 357 PPVQPQVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARFPPTTAVSAIPSSSIP 416 Query: 291 YGQQPTSQ----------APAPAFSGQ-PQQLPAQP---PQQYQASNYP-AQTYTAQTSQ 335 G+QP +Q +P+P Q PQ +P P PQ Q S+ P + + Sbjct: 417 LGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAPS 476 Query: 336 PTNYTVAPASQPGMAPSQPGAYQ----PRPGFTSL---PGSTMTPPPS 376 P+++ +P+ QP +P Q P PG + P S M+P S Sbjct: 477 PSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSPAGS 524 >gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] Length = 748 Score = 56.2 bits (134), Expect = 5e-08 Identities = 74/257 (28%), Positives = 86/257 (33%), Gaps = 36/257 (14%) Query: 172 KNQDEINKNVMSAFGLTDDQVSG------PPSAPAEDRSGTPDSIAS----SSSAAHPPG 221 K+Q ++ + + LT +G PP P + G A S S PPG Sbjct: 73 KSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPG 132 Query: 222 VQPQQP----------PYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQ 271 P P T Q Q ++ Q QQ QQ A Q Q QQ QQ+ Q Sbjct: 133 TSGMAPHSMAVVSTATPQTQLQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQQQQFQAQ 192 Query: 272 YSASYSQ-QTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQ-------ASN 323 SA Q Q QQ QQ Q QQ Q Q QQ Q QQ Q Sbjct: 193 QSAMQQQFQAVVQQQQQLQ---QQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQ 249 Query: 324 YPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGST---MTPPPSGPNP 380 Q Q Q P QP M QP Q P T PP P Sbjct: 250 QQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPP 309 Query: 381 YARNRPPF--GQGYTQP 395 A+N+P Q TQP Sbjct: 310 VAQNQPSQLPPQSQTQP 326 Score = 52.0 bits (123), Expect = 9e-07 Identities = 61/232 (26%), Positives = 81/232 (34%), Gaps = 28/232 (12%) Query: 172 KNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTG 231 +NQ +I + + Q+ + + ++ + PP QPQ PP Sbjct: 226 QNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPP--- 282 Query: 232 AQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGP--QQPQQFQ 289 +Q Q++ QM+ Q QQP QP Q Q QT P Q Q Sbjct: 283 SQALPQQLQ-QMHHTQHHQPPPQPQQPPVAQNQPSQLPPQ------SQTQPLVSQAQALP 335 Query: 290 G---YGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQ 346 G Y Q P AP + QPP Q Q TAQ +Q VAP Q Sbjct: 336 GQMLYTQPPLKFVRAP-------MVVQQPPVQPQVQQQQTAVQTAQAAQ----MVAPGVQ 384 Query: 347 PGMAPSQPGAYQPRPGFTSLPGSTMTPPPS-GPNPYARNRPPFGQGYTQPGP 397 + S P P PG +M PPP P P + P + P P Sbjct: 385 VSQS-SLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPSSQPNSNVSSGPAP 435 Score = 50.1 bits (118), Expect = 4e-06 Identities = 52/186 (27%), Positives = 71/186 (38%), Gaps = 27/186 (14%) Query: 218 HPPGVQPQQPPYTGAQ--------------TQAGQIEGQM-YQQYQQQAGYGAQQPQAPP 262 H P QPQQPP Q +QA + GQM Y Q + Q PP Sbjct: 299 HQPPPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPP 358 Query: 263 QQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQ-PQQLPAQP---PQQ 318 QPQ Q + +Q P P +P+P Q PQ +P P PQ Sbjct: 359 VQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQP 418 Query: 319 YQASNYP-AQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQ----PRPGFTSL---PGST 370 Q S+ P + + P+++ +P+ QP +P Q P PG + P S Sbjct: 419 GQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSV 478 Query: 371 MTPPPS 376 M+P S Sbjct: 479 MSPAGS 484 >gi|5454064 RNA binding motif protein 14 [Homo sapiens] Length = 669 Score = 55.8 bits (133), Expect = 7e-08 Identities = 55/187 (29%), Positives = 75/187 (40%), Gaps = 14/187 (7%) Query: 198 APAEDRSGTPDSIASSSSAAHP-PGVQPQQPPYT--GAQTQAGQIEGQMYQQYQQQAGYG 254 AP + +P S ++++S+ P G QP + G Q A Q A YG Sbjct: 283 APYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYG 342 Query: 255 AQQPQAPPQQPQQYGIQYSASYSQQTGPQQP-----QQFQGYGQQPTSQAPAPAFSGQPQ 309 Q Q YG++ +AS G Q YG Q S A + A+ Q Sbjct: 343 NQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQ--SAASSLAYGAQAA 400 Query: 310 QLPAQPPQQY--QASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLP 367 AQP Y Q++ Y AQ + +SQP Y PA+ A SQP AY + T + Sbjct: 401 SYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYA-SQPAAYAAQ-ATTPMA 458 Query: 368 GSTMTPP 374 GS P Sbjct: 459 GSYGAQP 465 Score = 47.4 bits (111), Expect = 2e-05 Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 20/141 (14%) Query: 249 QQAGYGAQQPQ---APPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTS----QAPA 301 Q A YGAQ A Q Y Q SASY+ Q+ P QQ Y QP + A A Sbjct: 380 QAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATA 439 Query: 302 PAFSGQPQQLPAQPPQQYQASNYPAQ--------TYTAQTSQPTNYTVAPASQPGMAPSQ 353 A++ QP AQ A +Y AQ +Y AQ S + + S A + Sbjct: 440 AAYASQPAAYAAQATTP-MAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQS----AAAA 494 Query: 354 PGAYQPRPGFTSLPGSTMTPP 374 G+Y + + P +T+ P Sbjct: 495 TGSYGAAAAYGAQPSATLAAP 515 Score = 46.2 bits (108), Expect = 5e-05 Identities = 61/207 (29%), Positives = 76/207 (36%), Gaps = 19/207 (9%) Query: 184 AFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQM 243 A+G + PSA +S P + ++S + P QP A A Q Sbjct: 394 AYGAQAASYNAQPSASYNAQSA-PYAAQQAASYSSQPAAYVAQPATAAAY--ASQPAAYA 450 Query: 244 YQQYQQQAG-YGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAP 302 Q AG YGAQ Q YG Q S S G Q G S A Sbjct: 451 AQATTPMAGSYGAQP--VVQTQLNSYGAQASMGLSGSYGAQSAAAATG------SYGAAA 502 Query: 303 AFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPG 362 A+ QP A P + Q+S A +Y AQ Q + QPG A GA QP Sbjct: 503 AYGAQPSATLAAP-YRTQSSASLAASYAAQ--QHPQAAASYRGQPGNA--YDGAGQPSAA 557 Query: 363 FTSLPGSTMTPPPSGPNPYARNR--PP 387 + S+ + S P PY R R PP Sbjct: 558 YLSMSQGAVANANSTPPPYERTRLSPP 584 >gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 [Homo sapiens] Length = 371 Score = 55.5 bits (132), Expect = 9e-08 Identities = 44/132 (33%), Positives = 49/132 (37%), Gaps = 10/132 (7%) Query: 218 HPPGVQPQ-----QPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQY 272 +P G QP QPPY GA + Y Q G PQ P G Sbjct: 21 YPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYP 80 Query: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS-GQPQQLPAQPPQQYQASNY----PAQ 327 Y Q+ PQ P GY Q P Q+P P GQPQ P Q P Q NY P Sbjct: 81 QGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPPS 140 Query: 328 TYTAQTSQPTNY 339 Y Q TN+ Sbjct: 141 YYDNQDFPATNW 152 Score = 29.6 bits (65), Expect = 5.0 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 8/72 (11%) Query: 334 SQPTNYTVAPASQPGMAPSQPGAYQP-RPGFTS--LPGSTMTPPPSGPNPYARNRPPFG- 389 S ++ V+ + P P PG QP P + PG+ PP P+PY + P G Sbjct: 2 SHEKSFLVSGDNYPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGP 61 Query: 390 ----QGYTQPGP 397 QG GP Sbjct: 62 SPYPQGGYPQGP 73 >gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 [Homo sapiens] Length = 371 Score = 55.5 bits (132), Expect = 9e-08 Identities = 44/132 (33%), Positives = 49/132 (37%), Gaps = 10/132 (7%) Query: 218 HPPGVQPQ-----QPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQY 272 +P G QP QPPY GA + Y Q G PQ P G Sbjct: 21 YPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYP 80 Query: 273 SASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS-GQPQQLPAQPPQQYQASNY----PAQ 327 Y Q+ PQ P GY Q P Q+P P GQPQ P Q P Q NY P Sbjct: 81 QGPYPQEGYPQGPYPQGGYPQGPYPQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPPS 140 Query: 328 TYTAQTSQPTNY 339 Y Q TN+ Sbjct: 141 YYDNQDFPATNW 152 Score = 29.6 bits (65), Expect = 5.0 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 8/72 (11%) Query: 334 SQPTNYTVAPASQPGMAPSQPGAYQP-RPGFTS--LPGSTMTPPPSGPNPYARNRPPFG- 389 S ++ V+ + P P PG QP P + PG+ PP P+PY + P G Sbjct: 2 SHEKSFLVSGDNYPPPNPGYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSPYGQPGYPHGP 61 Query: 390 ----QGYTQPGP 397 QG GP Sbjct: 62 SPYPQGGYPQGP 73 >gi|148277037 AP2 associated kinase 1 [Homo sapiens] Length = 961 Score = 55.1 bits (131), Expect = 1e-07 Identities = 64/201 (31%), Positives = 71/201 (35%), Gaps = 23/201 (11%) Query: 195 PPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYG 254 PPS P P + A A PP PQQ P T AQ Q + Q Q Sbjct: 423 PPSQPL------PQTQAKQPQA--PP--TPQQTPSTQAQGLPAQAQATPQHQQQLFLKQQ 472 Query: 255 AQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPT-SQAPAPAFSGQPQQLPA 313 QQ Q PP Q Q G Y QQ QQ Q QQP +Q P + G QQL Sbjct: 473 QQQQQPPPAQQQPAGTFYQ---QQQAQTQQFQAVHPATQQPAIAQFPVVSQGGSQQQLMQ 529 Query: 314 ---QPPQQYQASNYPAQTYTA-QTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGS 369 Q QQ Q Q TA Q A +P MA Q QP+P P Sbjct: 530 NFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQP--QPQPAAAPQPAP 587 Query: 370 TMTPPPSGP---NPYARNRPP 387 P P P + PP Sbjct: 588 AQEPAIQAPVRQQPKVQTTPP 608 Score = 45.1 bits (105), Expect = 1e-04 Identities = 57/201 (28%), Positives = 71/201 (35%), Gaps = 21/201 (10%) Query: 169 DPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPP 228 +P+K + K LTD P + S P + PG+ P QP Sbjct: 335 EPVKASEAAAKKTQPKARLTDP-------IPTTETSIAPRQRPKAGQTQPNPGILPIQPA 387 Query: 229 YTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQT--GPQQPQ 286 T + Q Q Q G A PQ PQ P + + + Q PQQ Sbjct: 388 LTPRKRATVQPPPQAAGS-SNQPGLLASVPQPKPQAPPSQPLPQTQAKQPQAPPTPQQTP 446 Query: 287 QFQGYG----QQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVA 342 Q G Q T Q F Q QQ PP Q Q + Q AQT Q V Sbjct: 447 STQAQGLPAQAQATPQHQQQLFLKQQQQQQQPPPAQQQPAGTFYQQQQAQTQQ--FQAVH 504 Query: 343 PAS-QPGMAP----SQPGAYQ 358 PA+ QP +A SQ G+ Q Sbjct: 505 PATQQPAIAQFPVVSQGGSQQ 525 Score = 35.8 bits (81), Expect = 0.070 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 11/107 (10%) Query: 298 QAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYT--AQTSQP---TNYTVAPASQP--GMA 350 + P P P +PA+ P+ +AS A+ A+ + P T ++AP +P G Sbjct: 318 ECPIPNVQNSP--IPAKLPEPVKASEAAAKKTQPKARLTDPIPTTETSIAPRQRPKAGQT 375 Query: 351 PSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 PG +P T +T+ PPP + N+P QP P Sbjct: 376 QPNPGILPIQPALTPRKRATVQPPPQAAG--SSNQPGLLASVPQPKP 420 >gi|124378039 SEC16 homolog A [Homo sapiens] Length = 2357 Score = 54.7 bits (130), Expect = 1e-07 Identities = 77/308 (25%), Positives = 118/308 (38%), Gaps = 48/308 (15%) Query: 123 LEPPGEPGPSTNIPENDTVDGREEKS-------ASDSSGKQSTQVMAASMSAFDPLKNQD 175 ++PP +P P +PE+ ++ K+ A+ +G S ++ + P N+ Sbjct: 926 VQPPSQPVPENLVPESQ----KDRKAGSALPGFANSPAGSTSVVLVPPAHGTLVPDGNKA 981 Query: 176 EINKNVMSAFGLTDDQVSGPPSAPAEDRSGT-PDSIASSSS-AAHPPGVQPQQPPYTGAQ 233 + + +G D +S P + + DS+AS S A+HP P P Sbjct: 982 NHSSHQEDTYGALDFTLSRTLENPVNVYNPSHSDSLASQQSVASHPRQSGPGAPNLDRFY 1041 Query: 234 TQAGQ-IEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQ-PQQFQGY 291 Q + +GQ + QQ QQ +PPQ P+ A +S+ + P+ P Q Q Sbjct: 1042 QQVTKDAQGQPGLERAQQELVPPQQQASPPQLPK-------AMFSELSNPESLPAQGQA- 1093 Query: 292 GQQPTSQAPAP-AFSGQPQQLPAQPPQQYQASNYPAQTYTA--QTSQPTNYTVAPASQPG 348 Q ++Q+PA QQLP +PPQ S + + A + QP V PA PG Sbjct: 1094 --QNSAQSPASLVLVDAGQQLPPRPPQSSSVSLVSSGSGQAAVPSEQPWPQPV-PALAPG 1150 Query: 349 MAPSQPGA-YQPRPGFTSLPGSTMTPPPSGP------------------NPYARNRPPFG 389 P A Y RP + + P P P PY + Sbjct: 1151 PPPQDLAAYYYYRPLYDAYQPQYSLPYPPEPGAASLYYQDVYSLYEPRYRPYDGAASAYA 1210 Query: 390 QGYTQPGP 397 Q Y P P Sbjct: 1211 QNYRYPEP 1218 Score = 40.4 bits (93), Expect = 0.003 Identities = 42/189 (22%), Positives = 67/189 (35%), Gaps = 14/189 (7%) Query: 200 AEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQP- 258 A R + SSS + PP +Q P G G + + + Q G +P Sbjct: 56 AFSRQALQSTPLGSSSKSSPPVLQGPAP--AGFSQHPGLLVPHTHARDSSQ---GPCEPL 110 Query: 259 QAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQ 318 P QP+ + +S + + + P P+ + P+S+ P +P P+ Sbjct: 111 PGPLTQPRAHASPFSGALTP-SAPPGPEMNRSAEVGPSSEPEVQTLPYLPHYIPGVDPET 169 Query: 319 ----YQASNYPAQTYTAQTSQPTNYTVAPASQPGMAP---SQPGAYQPRPGFTSLPGSTM 371 + N P P + V PA+ P + PG + P G G Sbjct: 170 SHGGHPHGNMPGLDRPLSRQNPHDGVVTPAASPSLPQPGLQMPGQWGPVQGGPQPSGQHR 229 Query: 372 TPPPSGPNP 380 +P P GP P Sbjct: 230 SPCPEGPVP 238 Score = 37.0 bits (84), Expect = 0.032 Identities = 55/261 (21%), Positives = 87/261 (33%), Gaps = 63/261 (24%) Query: 128 EPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGL 187 +P P P + + G++ ++ S ++ QS + AS Sbjct: 752 KPQPPVVQPPEEAMSGQQSRNPSSAAPVQSRGGIGAS----------------------- 788 Query: 188 TDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQY 247 + + PP E+ + S +S + PP Q PP AQ Sbjct: 789 --ENLENPPKMGEEEALQSQASSGYASLLSSPPTESLQNPPVLIAQPDHS---------- 836 Query: 248 QQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPA------ 301 Y QP I +S S S Q + G +P + A Sbjct: 837 -----YNLAQP-----------INFSVSLSNSHEKNQSWREALVGDRPAVSSWALGGDSG 880 Query: 302 --PAFSGQPQQ--LPAQPPQQYQASNYPAQTYTAQ--TSQPTNYTVAPASQPGMAPSQPG 355 + SG P L P SN+P + ++ ++QP N V P SQP P Sbjct: 881 ENTSLSGIPTSSVLSLSLPSSVAQSNFPQGSGASEMVSNQPANLLVQPPSQPVPENLVPE 940 Query: 356 AYQPRPGFTSLPGSTMTPPPS 376 + + R ++LPG +P S Sbjct: 941 SQKDRKAGSALPGFANSPAGS 961 Score = 28.9 bits (63), Expect = 8.6 Identities = 45/217 (20%), Positives = 75/217 (34%), Gaps = 36/217 (16%) Query: 206 TPDSIASSSSAAHPPGVQ-----PQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA----- 255 TP S A PPG P QPP + + + GQ ++ ++ G Sbjct: 2054 TPSRTVPDSEA--PPGWDRADSGPTQPPLSLSPAPETKRPGQAAKKETKEPKKGESWFFR 2111 Query: 256 -----QQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQ 310 ++ +A + I + +Q +P++ +AP P + P+ Sbjct: 2112 WLPGKKKTEAYLPDDKNKSIVWDEKKNQWVNLNEPEE--------EKKAPPPPPTSMPKT 2163 Query: 311 LPAQPPQQYQASNYPAQTYT-------AQTSQPTNYTVAPASQPGMAPSQ---PGAYQPR 360 + A PP P Y+ A+ N + S+P +AP+ P A P Sbjct: 2164 VQAAPPALPGPPGAPVNMYSRRAAGTRARYVDVLNPSGTQRSEPALAPADFVAPLAPLPI 2223 Query: 361 PGFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQPGP 397 P +P + P P+ R P +G P P Sbjct: 2224 PSNLFVP-TPDAEEPQLPDGTGREGPAAARGLANPEP 2259 >gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo sapiens] Length = 2231 Score = 54.3 bits (129), Expect = 2e-07 Identities = 79/304 (25%), Positives = 106/304 (34%), Gaps = 75/304 (24%) Query: 126 PGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAF 185 PG PGP+ GR + S D + Q+ + P + + ++ Sbjct: 445 PGTPGPTM---------GRSQGSPMDPMVMKRPQLYGMGSN---PHSQPQQSSPYPGGSY 492 Query: 186 GLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQ 245 G GP P + TP ++A +P Q Q PP G Q +G + Sbjct: 493 G-----PPGPQRYPIGIQGRTPGAMAGMQ---YP---QQQMPPQYGQQGVSGYCQ----- 536 Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQT-GPQQPQQFQGYGQQPTSQAPA--- 301 Q Q Y +QQPQ P PQ QY S SQQ PQQ +GYG + SQ P Sbjct: 537 --QGQQPYYSQQPQPPHLPPQA---QYLPSQSQQRYQPQQDMSQEGYGTR--SQPPLAPG 589 Query: 302 ------------------PAFSGQPQQLPA--------------QPPQQYQASNYPAQTY 329 P SG LP Q SN PAQ+ Sbjct: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN-PAQSP 648 Query: 330 TAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGF---TSLPGSTMTPPPSGPNPYARNRP 386 + + P ++ P S G+ Q R G S+PGS M P P G + + P Sbjct: 649 FSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHP 708 Query: 387 PFGQ 390 Q Sbjct: 709 ALSQ 712 Score = 46.6 bits (109), Expect = 4e-05 Identities = 77/302 (25%), Positives = 101/302 (33%), Gaps = 45/302 (14%) Query: 122 SLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNV 181 S PP P + G ++ +A GK AA+ A+ + + + Sbjct: 386 SAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445 Query: 182 MSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQP-PYTGAQTQAGQIE 240 + G T + G P P + + S+ P QPQQ PY G G Sbjct: 446 GTP-GPTMGRSQGSPMDPMVMKRPQLYGMGSN------PHSQPQQSSPYPGGSY--GPPG 496 Query: 241 GQMYQQYQQQAGYGAQQPQAPPQQ--PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQ 298 Q Y Q GA PQQ P QYG Q + Y QQ QQP Y QQP Sbjct: 497 PQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQG--QQPY----YSQQPQP- 549 Query: 299 APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQP---------TNYTVAPASQPGM 349 P Q Q LP+Q Q+YQ +Q SQP + + +P Sbjct: 550 ---PHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 606 Query: 350 APSQPGAYQPRP--------------GFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQP 395 P G+ P G TS G P S +P+A G P Sbjct: 607 LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSP 666 Query: 396 GP 397 P Sbjct: 667 SP 668 Score = 42.0 bits (97), Expect = 0.001 Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 21/143 (14%) Query: 218 HPPGVQPQQPPYTGAQT-----QAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQY 272 H PG+ PQQP Y A + EG MY Y +QQ + QYG Y Sbjct: 1343 HQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQ-----YSSQQQE----MYNQYGGSY 1393 Query: 273 SAS-----YSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQ 327 S Q P ++ QG GQ T P G Q ++ PQQ + Sbjct: 1394 SGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDM 1453 Query: 328 TYTAQTSQ-PTNYTVAPASQPGM 349 Y Q Q P T AP PGM Sbjct: 1454 PYPYQNRQGPGGPTQAP-PYPGM 1475 Score = 38.5 bits (88), Expect = 0.011 Identities = 52/201 (25%), Positives = 65/201 (32%), Gaps = 42/201 (20%) Query: 233 QTQAGQIEGQMYQQYQQQ-----------AGYGAQQPQAPPQQPQQYGIQYSASYSQQTG 281 Q Q Q + Q QQ QQQ AG GA QP +QPQ G + SA+ Q Sbjct: 56 QQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP 115 Query: 282 PQQP----------------------QQFQGYGQQPTSQAP--APAFSGQPQQLPAQPPQ 317 P P + G G T Q P P G P +P Sbjct: 116 PGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEF--N 173 Query: 318 QYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSG 377 Y S PA + P PGM + PGS M P + Sbjct: 174 NYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM----MHSASAAAAGAPGS-MDPLQNS 228 Query: 378 PNPYARNRPPFGQGYTQPGPG 398 Y ++ GY++PG G Sbjct: 229 HEGYPNSQCNHYPGYSRPGAG 249 Score = 36.2 bits (82), Expect = 0.054 Identities = 69/261 (26%), Positives = 93/261 (35%), Gaps = 47/261 (18%) Query: 148 SASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRS--- 204 SA+ S KQ Q + A ++ +E V S G T Q P +PA S Sbjct: 1118 SAASSLKKQYIQYLFAFECK---IERGEEPPPEVFST-GDTKKQPKLQPPSPANSGSLQG 1173 Query: 205 -GTPDSIASSSSAAHPPGVQPQQPPYT--GAQT--QAGQIEG-QMYQQYQQQAGYG---- 254 TP S S+S A P ++P P T G T Q G+ ++ + + Sbjct: 1174 PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1233 Query: 255 -AQQPQAPPQQ----PQQYG-IQYSASYSQQTG----PQQPQQFQGYGQQPTS------- 297 + P AP QQ P G + Y + G P + F GQ P S Sbjct: 1234 NSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN 1293 Query: 298 QAPAPAFS----GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQ 353 Q+P+ A S GQ QQ P + Y Q Y Q P+ QP Q Sbjct: 1294 QSPSGAMSNLGMGQRQQFPYGASYDRRHEPY-GQQYPGQGP--------PSGQPPYGGHQ 1344 Query: 354 PGAYQPRPGFTSLPGSTMTPP 374 PG Y +P + PP Sbjct: 1345 PGLYPQQPNYKRHMDGMYGPP 1365 Score = 36.2 bits (82), Expect = 0.054 Identities = 46/212 (21%), Positives = 71/212 (33%), Gaps = 29/212 (13%) Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255 P + +R P I + G Q G Q M YQ + G G Sbjct: 1406 PYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGG 1465 Query: 256 QQPQAPPQQ----------PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305 QAPP P Q I + + + +QP QP ++ P P++ Sbjct: 1466 PT-QAPPYPGMNRTDDMMVPDQR-INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSY- 1522 Query: 306 GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTS 365 Q P P + PA + ++ ++P+ P + + P + Sbjct: 1523 ----QTPPSLPNHISRAPSPASFQRSLENR-----MSPSKSPFLPSMKMQKVMP-----T 1568 Query: 366 LPGSTMTPPPSGPNPYAR--NRPPFGQGYTQP 395 +P S +T PP P P R PP +QP Sbjct: 1569 VPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1600 Score = 35.4 bits (80), Expect = 0.092 Identities = 61/234 (26%), Positives = 79/234 (33%), Gaps = 69/234 (29%) Query: 188 TDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGA-----QTQAGQIEGQ 242 T +Q+ PS G+ +S S+ PP Q GA Q AG G+ Sbjct: 360 TLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGK 419 Query: 243 -MYQQY---------QQQAGYGAQQPQAP----------------PQQPQQYGI------ 270 M QY QQ + A P P ++PQ YG+ Sbjct: 420 DMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHS 479 Query: 271 --QYSASY-SQQTGPQQPQQF----QG-------------------YGQQPTS----QAP 300 Q S+ Y GP PQ++ QG YGQQ S Q Sbjct: 480 QPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQ 539 Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP 354 P +S QPQ P PPQ + Q Y Q + SQP +AP +P Sbjct: 540 QPYYSQQPQP-PHLPPQAQYLPSQSQQRYQPQQDM-SQEGYGTRSQPPLAPGKP 591 Score = 31.6 bits (70), Expect = 1.3 Identities = 34/141 (24%), Positives = 47/141 (33%), Gaps = 24/141 (17%) Query: 256 QQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQP 315 +QP+ P P G Q TG + G + PT PA + Q P Q Sbjct: 1156 KQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT-----PASTPHGQMTPMQG 1210 Query: 316 PQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPP 375 + S + + + +S P ++ P AP Q G P Sbjct: 1211 GRSSTISVHDPFSDVSDSSFPKRNSMTPN-----APYQQGMSMP--------------DV 1251 Query: 376 SGPNPYARNRPPFGQGYTQPG 396 G PY N+ PFG PG Sbjct: 1252 MGRMPYEPNKDPFGGMRKVPG 1272 >gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo sapiens] Length = 2178 Score = 54.3 bits (129), Expect = 2e-07 Identities = 79/304 (25%), Positives = 106/304 (34%), Gaps = 75/304 (24%) Query: 126 PGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAF 185 PG PGP+ GR + S D + Q+ + P + + ++ Sbjct: 445 PGTPGPTM---------GRSQGSPMDPMVMKRPQLYGMGSN---PHSQPQQSSPYPGGSY 492 Query: 186 GLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQ 245 G GP P + TP ++A +P Q Q PP G Q +G + Sbjct: 493 G-----PPGPQRYPIGIQGRTPGAMAGMQ---YP---QQQMPPQYGQQGVSGYCQ----- 536 Query: 246 QYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQT-GPQQPQQFQGYGQQPTSQAPA--- 301 Q Q Y +QQPQ P PQ QY S SQQ PQQ +GYG + SQ P Sbjct: 537 --QGQQPYYSQQPQPPHLPPQA---QYLPSQSQQRYQPQQDMSQEGYGTR--SQPPLAPG 589 Query: 302 ------------------PAFSGQPQQLPA--------------QPPQQYQASNYPAQTY 329 P SG LP Q SN PAQ+ Sbjct: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN-PAQSP 648 Query: 330 TAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGF---TSLPGSTMTPPPSGPNPYARNRP 386 + + P ++ P S G+ Q R G S+PGS M P P G + + P Sbjct: 649 FSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHP 708 Query: 387 PFGQ 390 Q Sbjct: 709 ALSQ 712 Score = 46.6 bits (109), Expect = 4e-05 Identities = 77/302 (25%), Positives = 101/302 (33%), Gaps = 45/302 (14%) Query: 122 SLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNV 181 S PP P + G ++ +A GK AA+ A+ + + + Sbjct: 386 SAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445 Query: 182 MSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQP-PYTGAQTQAGQIE 240 + G T + G P P + + S+ P QPQQ PY G G Sbjct: 446 GTP-GPTMGRSQGSPMDPMVMKRPQLYGMGSN------PHSQPQQSSPYPGGSY--GPPG 496 Query: 241 GQMYQQYQQQAGYGAQQPQAPPQQ--PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQ 298 Q Y Q GA PQQ P QYG Q + Y QQ QQP Y QQP Sbjct: 497 PQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQG--QQPY----YSQQPQP- 549 Query: 299 APAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQP---------TNYTVAPASQPGM 349 P Q Q LP+Q Q+YQ +Q SQP + + +P Sbjct: 550 ---PHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 606 Query: 350 APSQPGAYQPRP--------------GFTSLPGSTMTPPPSGPNPYARNRPPFGQGYTQP 395 P G+ P G TS G P S +P+A G P Sbjct: 607 LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSP 666 Query: 396 GP 397 P Sbjct: 667 SP 668 Score = 42.0 bits (97), Expect = 0.001 Identities = 44/143 (30%), Positives = 53/143 (37%), Gaps = 21/143 (14%) Query: 218 HPPGVQPQQPPYTGAQT-----QAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQY 272 H PG+ PQQP Y A + EG MY Y +QQ + QYG Y Sbjct: 1290 HQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQ-----YSSQQQE----MYNQYGGSY 1340 Query: 273 SAS-----YSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQ 327 S Q P ++ QG GQ T P G Q ++ PQQ + Sbjct: 1341 SGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDM 1400 Query: 328 TYTAQTSQ-PTNYTVAPASQPGM 349 Y Q Q P T AP PGM Sbjct: 1401 PYPYQNRQGPGGPTQAP-PYPGM 1422 Score = 38.5 bits (88), Expect = 0.011 Identities = 52/201 (25%), Positives = 65/201 (32%), Gaps = 42/201 (20%) Query: 233 QTQAGQIEGQMYQQYQQQ-----------AGYGAQQPQAPPQQPQQYGIQYSASYSQQTG 281 Q Q Q + Q QQ QQQ AG GA QP +QPQ G + SA+ Q Sbjct: 56 QQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP 115 Query: 282 PQQP----------------------QQFQGYGQQPTSQAP--APAFSGQPQQLPAQPPQ 317 P P + G G T Q P P G P +P Sbjct: 116 PGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEF--N 173 Query: 318 QYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPPSG 377 Y S PA + P PGM + PGS M P + Sbjct: 174 NYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM----MHSASAAAAGAPGS-MDPLQNS 228 Query: 378 PNPYARNRPPFGQGYTQPGPG 398 Y ++ GY++PG G Sbjct: 229 HEGYPNSQCNHYPGYSRPGAG 249 Score = 36.2 bits (82), Expect = 0.054 Identities = 69/261 (26%), Positives = 93/261 (35%), Gaps = 47/261 (18%) Query: 148 SASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRS--- 204 SA+ S KQ Q + A ++ +E V S G T Q P +PA S Sbjct: 1065 SAASSLKKQYIQYLFAFECK---IERGEEPPPEVFST-GDTKKQPKLQPPSPANSGSLQG 1120 Query: 205 -GTPDSIASSSSAAHPPGVQPQQPPYT--GAQT--QAGQIEG-QMYQQYQQQAGYG---- 254 TP S S+S A P ++P P T G T Q G+ ++ + + Sbjct: 1121 PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1180 Query: 255 -AQQPQAPPQQ----PQQYG-IQYSASYSQQTG----PQQPQQFQGYGQQPTS------- 297 + P AP QQ P G + Y + G P + F GQ P S Sbjct: 1181 NSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN 1240 Query: 298 QAPAPAFS----GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQ 353 Q+P+ A S GQ QQ P + Y Q Y Q P+ QP Q Sbjct: 1241 QSPSGAMSNLGMGQRQQFPYGASYDRRHEPY-GQQYPGQGP--------PSGQPPYGGHQ 1291 Query: 354 PGAYQPRPGFTSLPGSTMTPP 374 PG Y +P + PP Sbjct: 1292 PGLYPQQPNYKRHMDGMYGPP 1312 Score = 36.2 bits (82), Expect = 0.054 Identities = 46/212 (21%), Positives = 71/212 (33%), Gaps = 29/212 (13%) Query: 196 PSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGA 255 P + +R P I + G Q G Q M YQ + G G Sbjct: 1353 PYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGG 1412 Query: 256 QQPQAPPQQ----------PQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305 QAPP P Q I + + + +QP QP ++ P P++ Sbjct: 1413 PT-QAPPYPGMNRTDDMMVPDQR-INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSY- 1469 Query: 306 GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTS 365 Q P P + PA + ++ ++P+ P + + P + Sbjct: 1470 ----QTPPSLPNHISRAPSPASFQRSLENR-----MSPSKSPFLPSMKMQKVMP-----T 1515 Query: 366 LPGSTMTPPPSGPNPYAR--NRPPFGQGYTQP 395 +P S +T PP P P R PP +QP Sbjct: 1516 VPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1547 Score = 35.4 bits (80), Expect = 0.092 Identities = 61/234 (26%), Positives = 79/234 (33%), Gaps = 69/234 (29%) Query: 188 TDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGA-----QTQAGQIEGQ 242 T +Q+ PS G+ +S S+ PP Q GA Q AG G+ Sbjct: 360 TLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGK 419 Query: 243 -MYQQY---------QQQAGYGAQQPQAP----------------PQQPQQYGI------ 270 M QY QQ + A P P ++PQ YG+ Sbjct: 420 DMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHS 479 Query: 271 --QYSASY-SQQTGPQQPQQF----QG-------------------YGQQPTS----QAP 300 Q S+ Y GP PQ++ QG YGQQ S Q Sbjct: 480 QPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQ 539 Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQP 354 P +S QPQ P PPQ + Q Y Q + SQP +AP +P Sbjct: 540 QPYYSQQPQP-PHLPPQAQYLPSQSQQRYQPQQDM-SQEGYGTRSQPPLAPGKP 591 Score = 31.6 bits (70), Expect = 1.3 Identities = 34/141 (24%), Positives = 47/141 (33%), Gaps = 24/141 (17%) Query: 256 QQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFSGQPQQLPAQP 315 +QP+ P P G Q TG + G + PT PA + Q P Q Sbjct: 1103 KQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT-----PASTPHGQMTPMQG 1157 Query: 316 PQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPRPGFTSLPGSTMTPPP 375 + S + + + +S P ++ P AP Q G P Sbjct: 1158 GRSSTISVHDPFSDVSDSSFPKRNSMTPN-----APYQQGMSMP--------------DV 1198 Query: 376 SGPNPYARNRPPFGQGYTQPG 396 G PY N+ PFG PG Sbjct: 1199 MGRMPYEPNKDPFGGMRKVPG 1219 >gi|188536004 zinc finger protein 469 [Homo sapiens] Length = 3925 Score = 53.9 bits (128), Expect = 2e-07 Identities = 67/274 (24%), Positives = 96/274 (35%), Gaps = 47/274 (17%) Query: 129 PGPSTNIP-ENDTVDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGL 187 PG + P E++T R K A ++ G Q A + P + +D K Sbjct: 27 PGHPSQPPLEDNTPATRTTKGAREAGG----QAQAMELPEAQPRQARDGELK-------- 74 Query: 188 TDDQVSGPPSAPAEDRSGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQY 247 PPS + S TP S + PPG P Q P AG+ EG Q+Y Sbjct: 75 -------PPSLRGQAPSSTPGKRGSPQT---PPGRSPLQAP----SRLAGRAEGSPPQRY 120 Query: 248 QQQAGYGAQQP--QAPPQQPQQYGIQYSASYSQQTGPQQPQQFQGYGQQPTSQAPAPAFS 305 +P P+ PQ +A + PQ P G G P Sbjct: 121 ILGIASSRTKPTLDETPENPQLE----AAQLPEVDTPQGP----GTGAPLRPGLPRTEAQ 172 Query: 306 GQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQ------- 358 ++L Q S++ + YT+ ++ P P G +P QPG+Y Sbjct: 173 PAAEELGFHRCFQEPPSSFTSTNYTSPSATPRPPAPGPPQSRGTSPLQPGSYPEYQASGA 232 Query: 359 ---PRPGFTSLPGSTMTPPPSGPNPYARNRPPFG 389 P S PG+ PP+ P P + P G Sbjct: 233 DSWPPAAENSFPGANFGVPPAEPEPIPKGSRPGG 266 Score = 38.1 bits (87), Expect = 0.014 Identities = 74/314 (23%), Positives = 113/314 (35%), Gaps = 57/314 (18%) Query: 126 PGEPGPSTN--IPENDTVDGREEKSASDSSGKQSTQVMAASMSA-------------FDP 170 PG PGP +P ++ R D+ GK++ V + A D Sbjct: 3556 PGSPGPLLQQALPLGASLP-RPGARGQDAEGKRAPLVFSGKRRAPGARGRCAPDHFQEDH 3614 Query: 171 L--KNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPD-SIASSSSAAHPPGVQPQQP 227 L K ++ + +++S G G + PA +S + D S AS+ S A V P++ Sbjct: 3615 LLQKEKEVSSSHMVSEGGPRGTFHKGSATKPAGCQSSSKDRSAASTPSKALKFPVHPRKA 3674 Query: 228 PYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQQ 287 G+ G + G P+A P P G ++ G QPQ Sbjct: 3675 --VGSLAPGELARGT-------ENGMKPATPKAKPG-PSSQGSGSPRPGTKTGGGSQPQP 3724 Query: 288 FQGYGQQPTSQAPA----PAFSGQPQQLPAQP-------------PQQYQASNYPAQTYT 330 G Q T+ PA P+ S P++LPA+ Q S P + Sbjct: 3725 ASGQLQSETATTPAKPSFPSRSPAPERLPARAQAKSCTKGPREAGEQGPHGSLGPKEKGE 3784 Query: 331 AQTSQPTNYTVAPASQP-----GMAPSQPGAYQPRPGFTSLPGSTMTPPPSGPNPYARNR 385 + T + PA G APS P P + P + P+ P P ++N+ Sbjct: 3785 SSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVL---PTKPKPNSQNK 3841 Query: 386 ---PPFGQGYTQPG 396 PP Q +PG Sbjct: 3842 PRPPPSEQRKAEPG 3855 Score = 33.5 bits (75), Expect = 0.35 Identities = 51/212 (24%), Positives = 80/212 (37%), Gaps = 48/212 (22%) Query: 223 QPQQPPYTGAQTQAGQIEGQMYQQYQQQAGYGAQQPQAPPQQP-QQYGIQYSASYSQQTG 281 + +QPP G + + G+ ++ + G +PQ P + Q+ G + + ++ G Sbjct: 1072 EDEQPPPRGPGFRGRRGRGEKRKEVELTQGPREDEPQKPRKAARQEAGGDGAPANPEEPG 1131 Query: 282 PQQPQQFQGYGQQPTSQAPA-------------PAFSGQPQQLPAQP---PQQYQAS--- 322 +P G G+ P ++ P+ P + +P P P P + S Sbjct: 1132 GSRP----GPGRSPQARGPSRSLETGAAAREGGPKCADRPSVAPKDPLQVPTNTETSEET 1187 Query: 323 ----NYPAQT---YTAQTSQP--TNYTVAPASQPGMAPSQPGA-------YQPRPGFTSL 366 ++P + TA+ S P T +T A S P + GA QP P Sbjct: 1188 RPSLDFPQEAKEPETAEESAPDSTEFTEALRSPPAACAGEMGASPGLLIPEQPPPS---- 1243 Query: 367 PGSTMTPPPSGPNPYARNRPPFGQGYTQPGPG 398 T TP PSG N P G T PG G Sbjct: 1244 RHDTGTPKPSGS---LANTAPHGSSPT-PGVG 1271 >gi|73695473 roquin [Homo sapiens] Length = 1133 Score = 53.9 bits (128), Expect = 2e-07 Identities = 74/323 (22%), Positives = 109/323 (33%), Gaps = 55/323 (17%) Query: 98 ESSQVKYLRRELIELRNKVNRLLDSLEPPGEPGPSTNIPENDTVDGREEKSASDSSGKQS 157 E + + + + L+ R ++ L L G P + +P+ VD K + +G S Sbjct: 442 ELEKFRKMNKRLVP-RRPLSASLGQLNEVGLPSAAI-LPDEGAVDLPSRKPPALPNGIVS 499 Query: 158 TQVMAASMSAFDPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDRSGTPDSIASSSSAA 217 T +++ P + ++ G D S P +P + P SI++ Sbjct: 500 T---GNTVTQLIPRGTDPSYDSSLKP--GKIDHLSSSAPGSPPDLLESVPKSISALPVNP 554 Query: 218 H--PPGVQPQQPPYTGAQTQAGQIEG-QMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSA 274 H PP PP + G Q+Y Q Y + APP +P A Sbjct: 555 HSIPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEP--------A 606 Query: 275 SYSQQTGPQQPQQFQGYGQQPTSQAPAPA-------------------FSGQPQQLPAQP 315 Y Q P Q +P AP PA + QPQQ P Sbjct: 607 PYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQERVVNSQYGTQPQQYPPIY 666 Query: 316 PQQYQASN-YPAQTYTAQT---SQPTNYTVAPASQPGMAPSQPGAYQP------------ 359 P Y YPA +YT + P + PA+ P P YQ Sbjct: 667 PSHYDGRRVYPAPSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQIESYYPVAPHPT 726 Query: 360 --RPGFTSLPGSTMTPPPSGPNP 380 RP + P + PPP P+P Sbjct: 727 QIRPSYLREPPYSRLPPPPQPHP 749 >gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] Length = 2382 Score = 52.8 bits (125), Expect = 6e-07 Identities = 71/265 (26%), Positives = 94/265 (35%), Gaps = 35/265 (13%) Query: 129 PGPSTNIPENDT----VDGREEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSA 184 P ST IP T V + E ++ Q Q S+S +V + Sbjct: 607 PSASTGIPTASTTSASVSTQVEPEEPEADQHQQLQYQQPSISVLSDGTVDSGQGSSVFTE 666 Query: 185 FGLTDDQVS--GPPSAPAEDRSGTPDSIASSSSA-AHPPGVQP-------QQPPYTGAQT 234 ++ Q G A P I S+ A + P GV P Q + + Sbjct: 667 SRVSSQQTVSYGSQHEQAHSTGTVPGHIPSTVQAQSQPHGVYPPSSVAQGQSQGQPSSSS 726 Query: 235 QAGQIEGQMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQT------GPQQPQ-- 286 G Q Q QQQ G Q APPQQ QY + +++ S+ T PQ PQ Sbjct: 727 LTGVSSSQPIQHPQQQQGI---QQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQVL 783 Query: 287 -QFQGYGQQPTSQAPAPAFSGQPQQLPAQPPQQYQASNYPAQT--YTAQTSQPTNYTVAP 343 Q Q P SQ P P G+P Q P Q S P + + QP + P Sbjct: 784 PQVSAGKQLPVSQ-PVPTIQGEP-----QIPVATQPSVVPVHSGAHFLPVGQPLPTPLLP 837 Query: 344 ASQPGMAP-SQPGAYQPRPGFTSLP 367 P S P + GF+SLP Sbjct: 838 QYPVSQIPISTPHVSTAQTGFSSLP 862 Score = 43.9 bits (102), Expect = 3e-04 Identities = 65/262 (24%), Positives = 91/262 (34%), Gaps = 65/262 (24%) Query: 144 REEKSASDSSGKQSTQVMAASMSAFDPLKNQDEINKNVMSAFGLTDDQVSGPPSAPAEDR 203 +E+K +SS KQ + +AS + L PSA Sbjct: 579 QEKKKQEESSLKQQVEQSSASQTGIKQL------------------------PSAS---- 610 Query: 204 SGTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQIEGQMYQQYQ--------QQAGYGA 255 +G P AS++SA+ V+P++P +A Q + YQQ +G G+ Sbjct: 611 TGIPT--ASTTSASVSTQVEPEEP-------EADQHQQLQYQQPSISVLSDGTVDSGQGS 661 Query: 256 Q---QPQAPPQQPQQYGIQYSASYSQQTGPQQ-----PQQFQGYGQQPTSQAPAPAFSGQ 307 + + QQ YG Q+ ++S T P Q Q +G P S GQ Sbjct: 662 SVFTESRVSSQQTVSYGSQHEQAHSTGTVPGHIPSTVQAQSQPHGVYPPSSVAQGQSQGQ 721 Query: 308 PQQL---------PAQPPQQYQASNY---PAQTYTAQTSQPTNYTVAPASQPGMAPSQPG 355 P P Q PQQ Q P QT SQ + + A +QP P P Sbjct: 722 PSSSSLTGVSSSQPIQHPQQQQGIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQAPQ 781 Query: 356 AYQPRPGFTSLPGSTMTPPPSG 377 LP S P G Sbjct: 782 VLPQVSAGKQLPVSQPVPTIQG 803 Score = 31.6 bits (70), Expect = 1.3 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 9/62 (14%) Query: 298 QAPAPAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAY 357 QA P + Q+P+ PP +N PA T SQP QP + P+QP + Sbjct: 1584 QAAGPTSTPLLPQVPSIPPLVQPVANVPAVQQTLIHSQP---------QPALLPNQPHTH 1634 Query: 358 QP 359 P Sbjct: 1635 CP 1636 >gi|48255900 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform a [Homo sapiens] Length = 1590 Score = 52.8 bits (125), Expect = 6e-07 Identities = 64/219 (29%), Positives = 74/219 (33%), Gaps = 26/219 (11%) Query: 194 GPPSAPAEDRS-----------GTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQ-IEG 241 GPP +P + S G P+ ++S S P PQ PP +Q G I G Sbjct: 107 GPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGP--TPPQMPP-----SQPGALIPG 159 Query: 242 QMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ-QFQGYGQQPTSQAP 300 Q G P Q Q + Y Q P+ Q QG P Q Sbjct: 160 DPQAMSQPNRGPSPFSPVQLHQLRAQI-LAYKMLARGQPLPETLQLAVQGKRTLPGLQQQ 218 Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360 Q QQ Q QQ Q P Q T Q QP S PG S P Q Sbjct: 219 QQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKL 278 Query: 361 PGFTSLPGSTMTP-PPSGPNPYARNRPPFGQGYTQPGPG 398 P PG +P PP+ P A P G QP PG Sbjct: 279 P--VPAPGGRPSPAPPAAAQPPAAAVP--GPSVPQPAPG 313 >gi|48255898 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a2 isoform b [Homo sapiens] Length = 1572 Score = 52.8 bits (125), Expect = 6e-07 Identities = 64/219 (29%), Positives = 74/219 (33%), Gaps = 26/219 (11%) Query: 194 GPPSAPAEDRS-----------GTPDSIASSSSAAHPPGVQPQQPPYTGAQTQAGQ-IEG 241 GPP +P + S G P+ ++S S P PQ PP +Q G I G Sbjct: 107 GPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGP--TPPQMPP-----SQPGALIPG 159 Query: 242 QMYQQYQQQAGYGAQQPQAPPQQPQQYGIQYSASYSQQTGPQQPQ-QFQGYGQQPTSQAP 300 Q G P Q Q + Y Q P+ Q QG P Q Sbjct: 160 DPQAMSQPNRGPSPFSPVQLHQLRAQI-LAYKMLARGQPLPETLQLAVQGKRTLPGLQQQ 218 Query: 301 APAFSGQPQQLPAQPPQQYQASNYPAQTYTAQTSQPTNYTVAPASQPGMAPSQPGAYQPR 360 Q QQ Q QQ Q P Q T Q QP S PG S P Q Sbjct: 219 QQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGPSTPQKL 278 Query: 361 PGFTSLPGSTMTP-PPSGPNPYARNRPPFGQGYTQPGPG 398 P PG +P PP+ P A P G QP PG Sbjct: 279 P--VPAPGGRPSPAPPAAAQPPAAAVP--GPSVPQPAPG 313 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.309 0.129 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,364,689 Number of Sequences: 37866 Number of extensions: 1274548 Number of successful extensions: 13178 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 247 Number of HSP's successfully gapped in prelim test: 1076 Number of HSP's that attempted gapping in prelim test: 7138 Number of HSP's gapped (non-prelim): 4443 length of query: 400 length of database: 18,247,518 effective HSP length: 104 effective length of query: 296 effective length of database: 14,309,454 effective search space: 4235598384 effective search space used: 4235598384 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.