Search of human proteins with 213385305

Search of human proteins with 213385305

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|213385305 LSM5 homolog, U6 small nuclear RNA associated
isoform b [Homo sapiens]
         (62 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|213385305 LSM5 homolog, U6 small nuclear RNA associated isofo...   126   4e-30
gi|195222722 LSM5 homolog, U6 small nuclear RNA associated isofo...   126   4e-30
gi|6912488 LSM5 homolog, U6 small nuclear RNA associated isoform...   126   4e-30
gi|4507129 small nuclear ribonucleoprotein polypeptide E [Homo s...    42   1e-04
gi|169213675 PREDICTED: similar to hCG23490 [Homo sapiens]             42   1e-04
gi|169214137 PREDICTED: similar to hCG23490 [Homo sapiens]             42   1e-04
gi|169213483 PREDICTED: hypothetical protein LOC100130109 [Homo ...    42   1e-04
gi|7657315 Lsm3 protein [Homo sapiens]                                 34   0.022
gi|4507133 small nuclear ribonucleoprotein polypeptide G [Homo s...    33   0.049
gi|226442852 small nuclear ribonucleoprotein G-like protein [Hom...    33   0.064
gi|239751668 PREDICTED: small nuclear ribonucleoprotein G-like p...    33   0.064
gi|239746174 PREDICTED: small nuclear ribonucleoprotein G-like p...    33   0.064
gi|169160654 PREDICTED: similar to small nuclear ribonucleoprote...    31   0.24 
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso...    30   0.32 
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof...    30   0.32 
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ...    30   0.42 
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ...    30   0.42 
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ...    30   0.42 
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ...    30   0.42 
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s...    30   0.42 
gi|7706425 U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens]     30   0.54 
gi|169194552 PREDICTED: similar to small nuclear ribonucleoprote...    29   0.93 
gi|7706423 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]     29   0.93 
gi|169216044 PREDICTED: similar to hCG2041320 [Homo sapiens]           28   1.2  
gi|169215838 PREDICTED: similar to hCG2041320 [Homo sapiens]           28   1.2  
gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]           28   1.2  
gi|237649049 small nuclear ribonucleoprotein D2 isoform 2 [Homo ...    28   2.1  
gi|4759158 small nuclear ribonucleoprotein D2 isoform 1 [Homo sa...    28   2.1  
gi|45269137 mitofusin 1 [Homo sapiens]                                 27   4.6  
gi|169203121 PREDICTED: similar to small nuclear ribonucleoprote...    26   7.9  

>gi|213385305 LSM5 homolog, U6 small nuclear RNA associated
          isoform b [Homo sapiens]
          Length = 62

 Score =  126 bits (316), Expect = 4e-30
 Identities = 62/62 (100%), Positives = 62/62 (100%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP 60
          MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP
Sbjct: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP 60

Query: 61 EV 62
          EV
Sbjct: 61 EV 62


>gi|195222722 LSM5 homolog, U6 small nuclear RNA associated
          isoform b [Homo sapiens]
          Length = 62

 Score =  126 bits (316), Expect = 4e-30
 Identities = 62/62 (100%), Positives = 62/62 (100%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP 60
          MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP
Sbjct: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP 60

Query: 61 EV 62
          EV
Sbjct: 61 EV 62


>gi|6912488 LSM5 homolog, U6 small nuclear RNA associated isoform
          a [Homo sapiens]
          Length = 91

 Score =  126 bits (316), Expect = 4e-30
 Identities = 62/62 (100%), Positives = 62/62 (100%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP 60
          MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP
Sbjct: 30 MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGP 89

Query: 61 EV 62
          EV
Sbjct: 90 EV 91


>gi|4507129 small nuclear ribonucleoprotein polypeptide E [Homo
          sapiens]
          Length = 92

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 19/47 (40%), Positives = 33/47 (70%), Gaps = 2/47 (4%)

Query: 7  IVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          I G ++GFD+++N+VL+D  E     + R+  +L +I+L G+NIT+L
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRK--QLGRIMLKGDNITLL 87


>gi|169213675 PREDICTED: similar to hCG23490 [Homo sapiens]
          Length = 92

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 2/47 (4%)

Query: 7  IVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          I G ++GFD+++N+VL+D  E     + R+  +L +I+L G NIT+L
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRK--QLGRIMLKGGNITLL 87


>gi|169214137 PREDICTED: similar to hCG23490 [Homo sapiens]
          Length = 92

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 2/47 (4%)

Query: 7  IVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          I G ++GFD+++N+VL+D  E     + R+  +L +I+L G NIT+L
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRK--QLGRIMLKGGNITLL 87


>gi|169213483 PREDICTED: hypothetical protein LOC100130109 [Homo
          sapiens]
          Length = 92

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 2/47 (4%)

Query: 7  IVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          I G ++GFD+++N+VL+D  E     + R+  +L +I+L G NIT+L
Sbjct: 43 IEGCIIGFDEYMNLVLDDAEEIHSKTKSRK--QLGRIMLKGGNITLL 87


>gi|7657315 Lsm3 protein [Homo sapiens]
          Length = 102

 Score = 34.3 bits (77), Expect = 0.022
 Identities = 21/59 (35%), Positives = 30/59 (50%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEG 59
          M++D+E+ G L  +D  +NM+L DV E   T E    T  +       NI ML   G+G
Sbjct: 33 MRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVRGDG 91


>gi|4507133 small nuclear ribonucleoprotein polypeptide G [Homo
          sapiens]
          Length = 76

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          +   + + G L GFD F+N+V+++  E   + +   I     +++ GN+I ML
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNI---GMVVIRGNSIIML 70


>gi|226442852 small nuclear ribonucleoprotein G-like protein [Homo
          sapiens]
          Length = 74

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          +   + + G L GFD F+N+V+++  E   + + + I  ++   + GN+I ML
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQKNIGMVE---IRGNSIIML 70


>gi|239751668 PREDICTED: small nuclear ribonucleoprotein G-like
          protein [Homo sapiens]
          Length = 74

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          +   + + G L GFD F+N+V+++  E   + + + I  ++   + GN+I ML
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQKNIGMVE---IRGNSIIML 70


>gi|239746174 PREDICTED: small nuclear ribonucleoprotein G-like
          protein [Homo sapiens]
          Length = 74

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          +   + + G L GFD F+N+V+++  E   + + + I  ++   + GN+I ML
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQKNIGMVE---IRGNSIIML 70


>gi|169160654 PREDICTED: similar to small nuclear
          ribonucleoprotein D1 polypeptide 16kDa [Homo sapiens]
          Length = 119

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLV 54
          +K+  ++ GT+ G D  +N  L+ V   ++TP+ R   +L+ + + GNNI   +
Sbjct: 19 LKNRTQVHGTVTGVDVSMNTHLKAV---KMTPKNREPVQLETLSIRGNNIRYFI 69


>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
          isoform B' [Homo sapiens]
          Length = 240

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 7/68 (10%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEF-EITPEGRRITKLDQ------ILLNGNNITML 53
          ++  +  +GT   FD  +N++L D  EF +I P+  +  + ++      +LL G N+  +
Sbjct: 21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSM 80

Query: 54 VPGGEGPE 61
             G  P+
Sbjct: 81 TVEGPPPK 88


>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B'
          isoform B [Homo sapiens]
          Length = 231

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 7/68 (10%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEF-EITPEGRRITKLDQ------ILLNGNNITML 53
          ++  +  +GT   FD  +N++L D  EF +I P+  +  + ++      +LL G N+  +
Sbjct: 21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSM 80

Query: 54 VPGGEGPE 61
             G  P+
Sbjct: 81 TVEGPPPK 88


>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
          sapiens]
          Length = 240

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFE-------ITPEGRRITKLDQILLNGNNITML 53
          ++  +  +GT   FD  +N++L D  EF          PE      L  +LL G N+  +
Sbjct: 21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSM 80

Query: 54 VPGGEGPE 61
             G  P+
Sbjct: 81 TVEGPPPK 88


>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
          sapiens]
          Length = 240

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFE-------ITPEGRRITKLDQILLNGNNITML 53
          ++  +  +GT   FD  +N++L D  EF          PE      L  +LL G N+  +
Sbjct: 21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSM 80

Query: 54 VPGGEGPE 61
             G  P+
Sbjct: 81 TVEGPPPK 88


>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
          sapiens]
          Length = 240

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFE-------ITPEGRRITKLDQILLNGNNITML 53
          ++  +  +GT   FD  +N++L D  EF          PE      L  +LL G N+  +
Sbjct: 21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSM 80

Query: 54 VPGGEGPE 61
             G  P+
Sbjct: 81 TVEGPPPK 88


>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
          sapiens]
          Length = 240

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFE-------ITPEGRRITKLDQILLNGNNITML 53
          ++  +  +GT   FD  +N++L D  EF          PE      L  +LL G N+  +
Sbjct: 21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSM 80

Query: 54 VPGGEGPE 61
             G  P+
Sbjct: 81 TVEGPPPK 88


>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
          sapiens]
          Length = 240

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFE-------ITPEGRRITKLDQILLNGNNITML 53
          ++  +  +GT   FD  +N++L D  EF          PE      L  +LL G N+  +
Sbjct: 21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSM 80

Query: 54 VPGGEGPE 61
             G  P+
Sbjct: 81 TVEGPPPK 88


>gi|7706425 U6 snRNA-associated Sm-like protein LSm8 [Homo
          sapiens]
          Length = 96

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 7  IVGTLLGFDDFVNMVLEDVTEFEI-TPEGRRITKLDQILLNGNNITML 53
          IVGTL GFD  +N++L++  E    + +G     L   ++ G+N+ ++
Sbjct: 23 IVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVI 70


>gi|169194552 PREDICTED: similar to small nuclear
          ribonucleoprotein polypeptide G [Homo sapiens]
          Length = 62

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 1  MKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          +   + + G L G D F+N+V+++  E   + +         +++ GN+I ML
Sbjct: 9  LNGGRHVQGILQGLDPFMNLVIDECVEMATSGQQ---NNTGMVVIRGNSILML 58


>gi|7706423 U6 snRNA-associated Sm-like protein LSm7 [Homo
          sapiens]
          Length = 103

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 5/56 (8%)

Query: 5  KEIVGTLLGFDDFVNMVLEDVTEFEITPEGR-RIT----KLDQILLNGNNITMLVP 55
          +E  G L GFD  +N+VL+   E+   P+ + ++T    +L  ++  G ++ ++ P
Sbjct: 31 REASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICP 86


>gi|169216044 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 7/60 (11%)

Query: 9   GTLLGFDDFVNMVLEDVTEF-EITPEGRRITKLDQ------ILLNGNNITMLVPGGEGPE 61
           G    FD  VN++L D  EF +I P+  +  +L++      +LL+G N+  +   G  P+
Sbjct: 174 GIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPK 233


>gi|169215838 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 7/60 (11%)

Query: 9   GTLLGFDDFVNMVLEDVTEF-EITPEGRRITKLDQ------ILLNGNNITMLVPGGEGPE 61
           G    FD  VN++L D  EF +I P+  +  +L++      +LL+G N+  +   G  P+
Sbjct: 174 GIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPK 233


>gi|169215637 PREDICTED: similar to hCG2041320 [Homo sapiens]
          Length = 318

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 7/60 (11%)

Query: 9   GTLLGFDDFVNMVLEDVTEF-EITPEGRRITKLDQ------ILLNGNNITMLVPGGEGPE 61
           G    FD  VN++L D  EF +I P+  +  +L++      +LL+G N+  +   G  P+
Sbjct: 174 GIFKAFDKHVNLILCDCDEFRKIKPKNVKQPELEEKHFWGLVLLHGENLVSMTVEGLPPK 233


>gi|237649049 small nuclear ribonucleoprotein D2 isoform 2 [Homo
           sapiens]
          Length = 108

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 16/64 (25%), Positives = 38/64 (59%), Gaps = 11/64 (17%)

Query: 2   KSDKEIVGTLLGFDDFVNMVLEDV----TEFEITPEGRRITK-------LDQILLNGNNI 50
           +++K+++G +  FD   NMVLE+V    TE   + +G++ +K       + ++ L G+++
Sbjct: 37  RNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSV 96

Query: 51  TMLV 54
            +++
Sbjct: 97  IVVL 100


>gi|4759158 small nuclear ribonucleoprotein D2 isoform 1 [Homo
           sapiens]
          Length = 118

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 16/64 (25%), Positives = 38/64 (59%), Gaps = 11/64 (17%)

Query: 2   KSDKEIVGTLLGFDDFVNMVLEDV----TEFEITPEGRRITK-------LDQILLNGNNI 50
           +++K+++G +  FD   NMVLE+V    TE   + +G++ +K       + ++ L G+++
Sbjct: 47  RNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSV 106

Query: 51  TMLV 54
            +++
Sbjct: 107 IVVL 110


>gi|45269137 mitofusin 1 [Homo sapiens]
          Length = 741

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 5   KEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITM 52
           K+I+ T+    D VN+  ED   + +     +I +LD I    N +T+
Sbjct: 345 KQILATVKNIMDSVNLAAEDKRHYSVEEREDQIDRLDFIRNQMNLLTL 392


>gi|169203121 PREDICTED: similar to small nuclear
          ribonucleoprotein polypeptide G [Homo sapiens]
          Length = 75

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 7  IVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 53
          + G L GF  F+N+++++  +  I+ +   I  ++   + GN+I  L
Sbjct: 26 VQGILWGFSHFMNLMIDECVKMAISGQQNNIRTVE---IGGNSIITL 69


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.142    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,363,742
Number of Sequences: 37866
Number of extensions: 75946
Number of successful extensions: 153
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 130
Number of HSP's gapped (non-prelim): 34
length of query: 62
length of database: 18,247,518
effective HSP length: 35
effective length of query: 27
effective length of database: 16,922,208
effective search space: 456899616
effective search space used: 456899616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.