LSM7 36161

Name: LSM7	Sequence: fasta or formatted (103aa)		NCBI GI: 7706423
Description: U6 snRNA-associated Sm-like protein LSm7		Referenced in: RNases and RNA Stability Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 4 1 C cysteine 1.9 2 1 D aspartate 10.7 11 2 E glutamate 5.8 6 1 F phenylalanine 2.9 3 1 G glycine 7.8 8 2 H histidine 0.0 0 0 I isoleucine 7.8 8 1 K lysine 9.7 10 4 L leucine 10.7 11 2 M methionine 2.9 3 1 N asparagine 1.9 2 1 P proline 4.9 5 1 Q glutamine 6.8 7 3 R arginine 4.9 5 1 S serine 3.9 4 1 T threonine 4.9 5 1 V valine 5.8 6 2 W tryptophan 0.0 0 0 Y tyrosine 2.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 U6 snRNA-associated Sm-like protein LSm7 SNRPG 0.175 small nuclear ribonucleoprotein polypeptide G LOC100130932 0.158 small nuclear ribonucleoprotein G-like protein [Hom... LOC100130932 0.158 PREDICTED: small nuclear ribonucleoprotein G-like p... LOC100130932 0.158 PREDICTED: small nuclear ribonucleoprotein G-like p... LOC100132425 0.120 PREDICTED: similar to small nuclear ribonucleoprote... LSM8 0.093 U6 snRNA-associated Sm-like protein LSm8 SNRPB 0.066 small nuclear ribonucleoprotein polypeptide B/B' iso... SNRPB 0.066 small nuclear ribonucleoprotein polypeptide B/B' isof... SNRPN 0.060 small nuclear ribonucleoprotein polypeptide N SNRPN 0.060 small nuclear ribonucleoprotein polypeptide N SNRPN 0.060 small nuclear ribonucleoprotein polypeptide N SNRPN 0.060 small nuclear ribonucleoprotein polypeptide N SNRPN 0.060 small nuclear ribonucleoprotein polypeptide N SNRPE 0.044 small nuclear ribonucleoprotein polypeptide E LOC100130109 0.044 PREDICTED: similar to hCG23490 LOC100128354 0.044 PREDICTED: similar to small nuclear ribonucleoprote... LOC100130109 0.044 PREDICTED: similar to hCG23490 LOC100128354 0.044 PREDICTED: similar to small nuclear ribonucleoprote... LOC100130109 0.044 PREDICTED: hypothetical protein LOC100130109 LOC100128354 0.044 PREDICTED: similar to small nuclear ribonucleoprote... LSM5 0.044 LSM5 homolog, U6 small nuclear RNA associated isoform... LSM1 0.033 Lsm1 protein LOC100133224 0.022 PREDICTED: similar to hCG2041320 LOC100133224 0.022 PREDICTED: similar to hCG2041320 LOC100133224 0.022 PREDICTED: similar to hCG2041320 LSM5 0.022 LSM5 homolog, U6 small nuclear RNA associated isofo... LSM5 0.022 LSM5 homolog, U6 small nuclear RNA associated isofo... LSM6 0.016 Sm protein F NOS1 0.011 nitric oxide synthase 1, neuronal Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.