Guide to the Human Genome
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Name: MFN1 Sequence: fasta or formatted (741aa) NCBI GI: 45269137
Description:

mitofusin 1

Referenced in:

Mitochondria
Partitioning and Organelles

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         51           2
 C cysteine            1.9         14           1
 D aspartate           5.4         40           2
 E glutamate           8.4         62           3
 F phenylalanine       4.7         35           2
 G glycine             3.6         27           2
 H histidine           2.7         20           1
 I isoleucine          5.5         41           3
 K lysine              7.4         55           3
 L leucine            10.9         81           2
 M methionine          2.4         18           1
 N asparagine          4.7         35           2
 P proline             3.1         23           1
 Q glutamine           4.9         36           2
 R arginine            4.6         34           2
 S serine              7.2         53           2
 T threonine           5.7         42           2
 V valine              7.3         54           2
 W tryptophan          1.1          8           1
 Y tyrosine            1.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitofusin 1 
MFN2                  0.646   mitofusin 2 
MFN2                  0.646   mitofusin 2 
MX1                   0.013   myxovirus resistance protein 1 
MX1                   0.013   myxovirus resistance protein 1 
HOMER1                0.010   homer 1 
DST                   0.010   dystonin isoform 1e precursor 
ROCK1                 0.008   Rho-associated, coiled-coil containing protein kinase...
OPA1                  0.008   optic atrophy 1 isoform 5 
OPA1                  0.008   optic atrophy 1 isoform 3 
OPA1                  0.008   optic atrophy 1 isoform 2 
OPA1                  0.008   optic atrophy 1 isoform 1 
MYO5C                 0.008   myosin VC 
MACF1                 0.007   microfilament and actin filament cross-linker protei...
CYTSB                 0.007   spectrin domain with coiled-coils 1 NSP5a3b 
CYTSB                 0.007   spectrin domain with coiled-coils 1 NSP5a3a 
CYTSB                 0.007   spectrin domain with coiled-coils 1 NSP5b3b 
CYTSB                 0.007   spectrin domain with coiled-coils 1 NSP5b3a 
SMC1B                 0.007   SMC1 structural maintenance of chromosomes 1-like 2 ...
OPA1                  0.007   optic atrophy 1 isoform 8 
OPA1                  0.007   optic atrophy 1 isoform 7 
OPA1                  0.007   optic atrophy 1 isoform 6 
OPA1                  0.007   optic atrophy 1 isoform 4 
INPP4A                0.006   inositol polyphosphate-4-phosphatase, type 1 isofor...
INPP4A                0.006   inositol polyphosphate-4-phosphatase, type 1 isoform ...
INPP4A                0.006   inositol polyphosphate-4-phosphatase, type 1 isoform ...
MYH9                  0.006   myosin, heavy polypeptide 9, non-muscle 
LUM                   0.006   lumican precursor 
MYH15                 0.006   myosin, heavy polypeptide 15 
NIN                   0.006   ninein isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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