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Search of human proteins with 211971092
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|211971092 hypothetical protein LOC100129583 [Homo sapiens]
(393 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|211971092 hypothetical protein LOC100129583 [Homo sapiens] 811 0.0
gi|118601070 hypothetical protein LOC158724 [Homo sapiens] 133 3e-31
gi|61966919 hypothetical protein LOC442444 [Homo sapiens] 123 3e-28
gi|22749289 hypothetical protein LOC170062 [Homo sapiens] 122 4e-28
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 35 0.12
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.12
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.12
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 35 0.12
gi|224809432 transmembrane and tetratricopeptide repeat containi... 35 0.12
gi|148746195 trichohyalin [Homo sapiens] 33 0.34
gi|171184451 centrosome-associated protein 350 [Homo sapiens] 33 0.45
gi|118600967 shroom family member 4 [Homo sapiens] 33 0.58
gi|44890068 zinc finger protein 262 [Homo sapiens] 33 0.58
gi|23957698 luman-recruiting factor [Homo sapiens] 32 0.99
gi|93102364 SWAP-70 protein [Homo sapiens] 32 1.3
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 32 1.3
gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform... 31 1.7
gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform... 31 1.7
gi|14165274 golgi-associated microtubule-binding protein HOOK3 [... 31 2.2
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 30 2.9
gi|122937341 hypothetical protein LOC388960 [Homo sapiens] 30 2.9
gi|28274705 family with sequence similarity 9, member A [Homo sa... 30 2.9
gi|121582655 ankyrin repeat domain 35 [Homo sapiens] 30 2.9
gi|29550928 sulfotransferase family, cytosolic, 1B, member 1 [Ho... 30 3.8
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 30 3.8
gi|14251215 Kruppel-like factor 5 [Homo sapiens] 30 4.9
gi|7662284 microtubule associated monoxygenase, calponin and LIM... 30 4.9
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 29 6.4
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 29 6.4
gi|20270373 T-cell activation Rho GTPase-activating protein isof... 29 6.4
>gi|211971092 hypothetical protein LOC100129583 [Homo sapiens]
Length = 393
Score = 811 bits (2096), Expect = 0.0
Identities = 393/393 (100%), Positives = 393/393 (100%)
Query: 1 MADRRRRLRPGTLAPVREGVNCRSRCFTKHKNGLKFPTSLHSRQLVFPRKGLDDFRKGCP 60
MADRRRRLRPGTLAPVREGVNCRSRCFTKHKNGLKFPTSLHSRQLVFPRKGLDDFRKGCP
Sbjct: 1 MADRRRRLRPGTLAPVREGVNCRSRCFTKHKNGLKFPTSLHSRQLVFPRKGLDDFRKGCP 60
Query: 61 PCTGLVTQVPVEGFLPQIYHRAPQLAPKKRQIKLLKEADVLSKLSPAQQARKAFLEDVEA 120
PCTGLVTQVPVEGFLPQIYHRAPQLAPKKRQIKLLKEADVLSKLSPAQQARKAFLEDVEA
Sbjct: 61 PCTGLVTQVPVEGFLPQIYHRAPQLAPKKRQIKLLKEADVLSKLSPAQQARKAFLEDVEA 120
Query: 121 HLTPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHS 180
HLTPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHS
Sbjct: 121 HLTPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHS 180
Query: 181 TQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENGISDIDEEFILKQFDID 240
TQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENGISDIDEEFILKQFDID
Sbjct: 181 TQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENGISDIDEEFILKQFDID 240
Query: 241 YETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKM 300
YETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKM
Sbjct: 241 YETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKM 300
Query: 301 RYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFIL 360
RYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFIL
Sbjct: 301 RYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFIL 360
Query: 361 SRGYRTPRFLENMYIGKECKRACNKTPIKRTQA 393
SRGYRTPRFLENMYIGKECKRACNKTPIKRTQA
Sbjct: 361 SRGYRTPRFLENMYIGKECKRACNKTPIKRTQA 393
>gi|118601070 hypothetical protein LOC158724 [Homo sapiens]
Length = 791
Score = 133 bits (334), Expect = 3e-31
Identities = 83/174 (47%), Positives = 109/174 (62%), Gaps = 4/174 (2%)
Query: 24 SRCFTKHKNG-LKFPTSLHSRQLVFPRKGLDDFRKGCPPCTGLVTQVPVEGFLPQIYHRA 82
S+CF K K+ L+FP + ++ VF ++G+DDFR GCP + E LP+I R
Sbjct: 27 SKCFAKCKHRRLRFPP-MDTQNWVFVKEGMDDFRYGCPSPEDTLVCRRDEFLLPKISLRG 85
Query: 83 PQLAPKKRQIKLLKEADVLSKLSPAQQARKAFLEDVEAHL-TPHPLALYLNLEEAMPIEL 141
PQ PK Q KLLK+A + SKLSPAQ ARKAF+E VEA L HPLA+Y NL E MP +L
Sbjct: 86 PQADPKSGQKKLLKKAALFSKLSPAQLARKAFVEQVEAQLMAKHPLAMYPNLGEDMPPDL 145
Query: 142 LSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSN 195
L +VL+ LDP+R+LED WA C+ K + PT+ K + L P +T VS+
Sbjct: 146 LLQVLKHLDPERELEDAWACCETQEKTTEVPTEPGKHPCGEFCLKP-PETPVSH 198
Score = 119 bits (299), Expect = 4e-27
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 10/163 (6%)
Query: 229 DEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGY-ERKLQ 287
DEE I FD + + +H+ K+ + ELK S+ L + E +FF + Y RK
Sbjct: 621 DEESIRNLFDFTPKYRATHEDQKFKKVKECSSELKYSMELDEKDEDKFFSQEKYWGRKFH 680
Query: 288 KPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLA 347
P N Y + VKM+YGAWYL PKLWKK R DEPL+DP++ K +E ++L
Sbjct: 681 TPSNSYTAQRVKMKYGAWYLKPKLWKKLRSDEPLIDPKLLLKKPDE---------PDVLD 731
Query: 348 DLHGTVAFKDFILSRGYRTPRFLENMYIGKECKRACNKTPIKR 390
DL+G +AFKDFILS+GY P ++ ++ + KTPI+R
Sbjct: 732 DLYGPIAFKDFILSKGYEMPGIIQRLFARRGWTYDSVKTPIQR 774
Score = 36.2 bits (82), Expect = 0.053
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 120 AHLTPHPL---ALYLNLEE---AMPIELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPT 173
+HL P P +L LE + LL +L+VLD R L+D W C+ K KEPT
Sbjct: 397 SHLHPVPPKTGVCHLRLEPPDTSQVSNLLLYILKVLDSGRTLKDVWDRCEARVKKTKEPT 456
Query: 174 KLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPR 217
+ K + L P +T VS+ K + LH P+
Sbjct: 457 EPHKSPCGEPCLQP-PETQVSHPHP--EHPKTRRRSSLHSQPPK 497
Score = 30.8 bits (68), Expect = 2.2
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 105 SPAQQARKAFLEDVEAHLTPHPLALYLN-LEEAMPI-----ELLSKVLEVLDPDRKLEDT 158
+P R E +HL P P ++ + PI LL ++L+ LD +RKLED
Sbjct: 218 TPVSSLRPEPPETGVSHLRPEPPETGVSHIRPGPPITRRRSSLLRQLLK-LDSERKLEDA 276
Query: 159 WAYCQDTRKGMKEPTK 174
A C+ K EPT+
Sbjct: 277 RAPCEGREKTTDEPTE 292
>gi|61966919 hypothetical protein LOC442444 [Homo sapiens]
Length = 1035
Score = 123 bits (309), Expect = 3e-28
Identities = 82/179 (45%), Positives = 108/179 (60%), Gaps = 7/179 (3%)
Query: 1 MADRRRRLRPGTLAPVREGVNCR---SRCFTKHKNG-LKFPTSLHSRQLVFPRKGLDDFR 56
M D+R + RP + C S+ F K K+ L+FP + ++ VF +G+DDFR
Sbjct: 1 MGDQRPQDRPSSPGMDSTPWYCDKPPSKYFAKRKHRRLRFPP-VDTQNWVFVTEGMDDFR 59
Query: 57 KGCPPCTGLVTQVPVEGFLPQIYHRAPQLAPKKRQIKLLKEADVLSKLSPAQQARKAFLE 116
GC + E LP+I R PQ PK R+ KLLK+A + SKLSPAQ ARKAF+E
Sbjct: 60 YGCQSPEDTLVCRRDEFLLPKISLRGPQADPKSRKKKLLKKAALFSKLSPAQPARKAFVE 119
Query: 117 DVEAHL-TPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTK 174
+VEA L T HPLA+Y NL E MP +LL +VL+ LDP+RKLED + C+ K EPT+
Sbjct: 120 EVEAQLMTKHPLAMYPNLGEDMPPDLLLQVLKPLDPERKLEDAGS-CEGQEKTTDEPTE 177
Score = 106 bits (264), Expect = 4e-23
Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 228 IDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFF-QKLGYERKL 286
++EE I FD E + ++ K N+ LK S+ L ++ E +FF Q+ + K+
Sbjct: 863 VNEESISSLFDFTPECRATYQDQKNKKANECSSGLKYSMELDEMDEVKFFSQEKDLDGKI 922
Query: 287 QKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELL 346
Q N + + VKM YGAWYL PKL KK R DEPL+DP++ E ++ ++L
Sbjct: 923 QNAPNSHSAQHVKMGYGAWYLKPKLGKKLRSDEPLIDPKL---------VLEKPDEPDIL 973
Query: 347 ADLHGTVAFKDFILSRGYRTPRFLENMYIGKECKRACNKTPIKR 390
L+G +AFKDFILS+GY P ++ ++ + KTPI+R
Sbjct: 974 DGLYGPIAFKDFILSKGYEMPGIIQRLFARRGWTYDSVKTPIQR 1017
>gi|22749289 hypothetical protein LOC170062 [Homo sapiens]
Length = 645
Score = 122 bits (307), Expect = 4e-28
Identities = 79/179 (44%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Query: 1 MADRRRRLRPGTLAPVREGVNCR---SRCFTKHKNG-LKFPTSLHSRQLVFPRKGLDDFR 56
M DRR + RP + + C S+ F K K+ L+FP + ++ VF +G+DDFR
Sbjct: 1 MGDRRPQDRPRSQGMDSKPWYCDKPPSKYFAKRKHRRLRFPP-VDTQNWVFVTEGMDDFR 59
Query: 57 KGCPPCTGLVTQVPVEGFLPQIYHRAPQLAPKKRQIKLLKEADVLSKLSPAQQARKAFLE 116
C + E LP+I R PQ K R+ KLLK+A + S+LSP Q ARKAF+E
Sbjct: 60 YACQSPEDTLVCRRDEFLLPKISLRGPQADRKSRKKKLLKKAALFSELSPVQPARKAFVE 119
Query: 117 DVEAHL-TPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTK 174
+VEA L T HPLA+Y NL + MP +LL +VL+ LDP+RKLED WA C+ K + PT+
Sbjct: 120 EVEAQLMTKHPLAMYPNLGKDMPPDLLLQVLKQLDPERKLEDAWARCEAREKTTEVPTE 178
Score = 102 bits (253), Expect = 8e-22
Identities = 85/307 (27%), Positives = 130/307 (42%), Gaps = 55/307 (17%)
Query: 130 YLNLEEAMPIELLSKVLEVL--DPDRKLEDTWAYCQDTRKGMKEPTKLLKKH-------- 179
+L LE + S +L+VL D ++KLED A C+ +E TK K H
Sbjct: 330 HLCLEPPNTHRVSSFLLQVLKLDSEKKLEDARARCEGQEMTTEELTKPGKYHFWESCPRP 389
Query: 180 -----------------STQVYLGPSK------------KTSVSNAGQWLYEEKPHKMDL 210
+ L P K KT S+ + E+ P M+
Sbjct: 390 FESRMPHLRLVLPITRRMASLCLKPPKTRRVSSLCPEPTKTGASHLKELFQEDTPSTMEC 449
Query: 211 LHENGPRPGLHEN-------GISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELK 263
+ ++ R G ++EE I FD E + + K N+ L
Sbjct: 450 VSDSLQRRHTSRKLRDFKWAGDLGVNEESISSLFDFTPECRTTDQDQKIKKANECASRLM 509
Query: 264 RSVGLSKLQETEFFQKLGYERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVD 323
+ L + E EF + ++R+ + + Y + ++RYG WY PKL KK R DEPL+D
Sbjct: 510 YGMELDDMDEVEFLRIKYWDRRRRAAPHSYSAQRGRIRYGPWYFEPKLGKKLRSDEPLID 569
Query: 324 PEVSHKAQEENFKKELQEQEELLADLHGTVAFKDFILSRGYRTPRFLENMYIGKECKRAC 383
P+ E ++ ++L L+G +AFKDFILS+GYR P +E ++ K
Sbjct: 570 PKP---------VLEKPDEPDILDGLYGPIAFKDFILSKGYRMPGVIEKLFAKKGWTYDS 620
Query: 384 NKTPIKR 390
KTPI+R
Sbjct: 621 VKTPIQR 627
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 35.0 bits (79), Expect = 0.12
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 164 DTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGP----RPG 219
DTR+ KE T TQ P K S++G+ Y E H L + GP G
Sbjct: 4956 DTRRNEKEGTL----GKTQFSFPPLKIQDSSDSGKKAYTESLHGYTLSNSKGPVQPTAQG 5011
Query: 220 LHENGIS-DIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETE 275
+ G+ D++++ + K D+ + D L+T KL E KR + K ++ +
Sbjct: 5012 EEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTKKLQWKSKEQKRKIQEDKNKQVK 5068
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 35.0 bits (79), Expect = 0.12
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 164 DTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGP----RPG 219
DTR+ KE T TQ P K S++G+ Y E H L + GP G
Sbjct: 4804 DTRRNEKEGTL----GKTQFSFPPLKIQDSSDSGKKAYTESLHGYTLSNSKGPVQPTAQG 4859
Query: 220 LHENGIS-DIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETE 275
+ G+ D++++ + K D+ + D L+T KL E KR + K ++ +
Sbjct: 4860 EEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTKKLQWKSKEQKRKIQEDKNKQVK 4916
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 35.0 bits (79), Expect = 0.12
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 164 DTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGP----RPG 219
DTR+ KE T TQ P K S++G+ Y E H L + GP G
Sbjct: 4804 DTRRNEKEGTL----GKTQFSFPPLKIQDSSDSGKKAYTESLHGYTLSNSKGPVQPTAQG 4859
Query: 220 LHENGIS-DIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETE 275
+ G+ D++++ + K D+ + D L+T KL E KR + K ++ +
Sbjct: 4860 EEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTKKLQWKSKEQKRKIQEDKNKQVK 4916
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 35.0 bits (79), Expect = 0.12
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 164 DTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGP----RPG 219
DTR+ KE T TQ P K S++G+ Y E H L + GP G
Sbjct: 4804 DTRRNEKEGTL----GKTQFSFPPLKIQDSSDSGKKAYTESLHGYTLSNSKGPVQPTAQG 4859
Query: 220 LHENGIS-DIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETE 275
+ G+ D++++ + K D+ + D L+T KL E KR + K ++ +
Sbjct: 4860 EEKGGLRIDMEDKMLPKCTDLKAKQLLLSDILNTKKLQWKSKEQKRKIQEDKNKQVK 4916
>gi|224809432 transmembrane and tetratricopeptide repeat containing
3 [Homo sapiens]
Length = 914
Score = 35.0 bits (79), Expect = 0.12
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 17/137 (12%)
Query: 95 LKEADVLSKLSPAQQARKAFLEDVEAHLTPHPLALYLNLEEAMPIELLSKVLEVLDPDRK 154
L+EAD L + QA + +A+++ L L +N P++ L+ L+ DR
Sbjct: 545 LEEADQLYR-----QAISMRPDFKQAYISRGELLLKMN----KPLKAKEAYLKALELDRN 595
Query: 155 LEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHEN 214
D W +KEP + LK + + L P K ++ N+ + E K+
Sbjct: 596 NADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKL------ 649
Query: 215 GPRPGLHENGISDIDEE 231
RP + +S I+EE
Sbjct: 650 --RPEARKRLLSYINEE 664
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 33.5 bits (75), Expect = 0.34
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 16/160 (10%)
Query: 198 QWLYEEKPHKMDLLHENGPRPGLHENGISDI--------DEEFILKQFDIDYETKPSHDA 249
QW EEK + RP L E + ++ F+ ++ + + + +
Sbjct: 770 QWQAEEKSERGR--QRLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRRRQRRER 827
Query: 250 LHTMKLNQVPLELKRSVGLSKLQETEF-FQKLGYERKLQKPQNPYKPKWV-----KMRYG 303
++ + +L+R +LQE E Q+ R+ Q+ + K +W K R
Sbjct: 828 EKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQERRRSQEQRRDQKWRWQLEEERKRRRH 887
Query: 304 AWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQE 343
Y P L ++ R ++ L+ E +EE K+ QEQE
Sbjct: 888 TLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQE 927
>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
Length = 3117
Score = 33.1 bits (74), Expect = 0.45
Identities = 51/214 (23%), Positives = 79/214 (36%), Gaps = 27/214 (12%)
Query: 93 KLLKEADVLSKLSPAQQARKAFLEDVEAHLTPHPLALYLNLEEAMPIELLSKVLEVL--- 149
+L+K +L + +K + E+ P PL +LN E ++P EL S +E +
Sbjct: 1903 ELIKPKTPKKELEDQRTEQKEIASEEES---PVPLYSHLNSESSIPEELGSPAVEYVPSE 1959
Query: 150 --------DPDRKLEDTWAYCQDTRKGMKEPTK-LLKKHSTQVYLGPSKKTSVSNAGQWL 200
PD + C + P+K L K T V S K S GQ
Sbjct: 1960 SIGQEQPGSPDHSILTEEMICSQELESSTSPSKHSLPKSCTSVSKQESSKGSHRTGGQCH 2019
Query: 201 YEEKPHKMDLLHENGPRPGLHENGISDIDEEFILKQFDIDYETKPSHDALHTMK--LNQV 258
K H+ + +S E Q DI+ + D L K +NQ+
Sbjct: 2020 LPIKSHQHCY--------SWSDESLSMTQSETTSDQSDIEGRIRALKDELRKRKSVVNQL 2071
Query: 259 PLE-LKRSVGLSKLQETEFFQKL-GYERKLQKPQ 290
E KR K QE ++L Y+ ++K +
Sbjct: 2072 KKEQKKRQKERLKAQEASLIKQLESYDEFIKKTE 2105
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 32.7 bits (73), Expect = 0.58
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 269 SKLQETEFFQKLGYERKLQKPQNPYKPKWVKMR-YGAWYLNPKLWKKQRVDEPLVDPEVS 327
SK ET+ LG +K P P P W K R + A + ++Q+ E + E
Sbjct: 1082 SKGDETQS-DLLGARKKAFPPPRPPPPNWEKYRLFRAAQQQKQQQQQQKQQEEEEEEEEE 1140
Query: 328 HKAQEENFKKELQEQEELL 346
+ +EE ++E +E+EE L
Sbjct: 1141 EEEEEEEEEEEAEEEEEEL 1159
>gi|44890068 zinc finger protein 262 [Homo sapiens]
Length = 1548
Score = 32.7 bits (73), Expect = 0.58
Identities = 41/174 (23%), Positives = 63/174 (36%), Gaps = 25/174 (14%)
Query: 65 LVTQVPVEGFLPQIYHRAPQLAPKKRQIKLLKEADVLSKLS-PAQQARKAFLEDVEAHLT 123
+V VPV F+P H Q AP I + +L S ++ +ED++ L
Sbjct: 980 IVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDKVTESIEDIKEKLP 1039
Query: 124 PHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQV 183
HP +LL + + + K + Q + + TK+ +K
Sbjct: 1040 THP----------FEADLLEMAEMIAEDEEKKTLSQGESQTSEHELFLDTKIFEKDQGST 1089
Query: 184 YLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENGISDIDEEFILKQF 237
Y G + +VS W EE H L N + + D E LKQF
Sbjct: 1090 YSGDLESEAVSTPHSW-EEELNHY-----------ALKSNAVQEADSE--LKQF 1129
>gi|23957698 luman-recruiting factor [Homo sapiens]
Length = 639
Score = 32.0 bits (71), Expect = 0.99
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 117 DVEAHLTPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTW----AYCQDTRKGMK 170
D E + +P +L+LE+ IE L +VLD + L W YC+D K K
Sbjct: 46 DREMNYQQNPRDNFLSLEDCKDIENLESFTDVLDNEGALTSNWEQWDTYCEDLTKYTK 103
>gi|93102364 SWAP-70 protein [Homo sapiens]
Length = 585
Score = 31.6 bits (70), Expect = 1.3
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 232 FILKQFDIDYETKPS------------HDALHTMKLNQVPLELKRSVGLSKLQETEFFQK 279
F++K FD +E S H +H +KL P + +L++ + ++
Sbjct: 275 FLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKLGSPPPHKEARQRRKELRKKQLAEQ 334
Query: 280 LGYERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKEL 339
ER++++ Q + K ++ L + ++ + +V +A+ F EL
Sbjct: 335 EELERQMKELQAANESKQQELEAVRKKLEEAASRAAEEEKKRLQTQVELQAR---FSTEL 391
Query: 340 QEQEELLADLHGTVAFKDFILSRGYRTPRFLENMYI 375
+ ++ + + VA K L + + R LE+MY+
Sbjct: 392 EREKLIRQQMEEQVAQKSSELEQYLQRVRELEDMYL 427
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 31.6 bits (70), Expect = 1.3
Identities = 20/98 (20%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 88 KKRQIKLLKEADVLSKLSPAQQARKAFLEDVEAHLTP--HPLALYLNLEEAMPIELLSKV 145
++ ++KL+++ + +L +++ ++ LE + L H L L +++ ++LSKV
Sbjct: 1937 EENKLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSKV 1996
Query: 146 LEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQV 183
L + R L++ +C+ K + + + L + Q+
Sbjct: 1997 LAAEERVRTLQEEERWCESLEKTLSQTKRQLSEREQQL 2034
>gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform a
[Homo sapiens]
Length = 2436
Score = 31.2 bits (69), Expect = 1.7
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 101 LSKLSPAQQARKAFLEDVEAHLTPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTWA 160
LS + P++ A+K E + HL AL+L+ M L L+V + D+ LE++ A
Sbjct: 1275 LSYILPSEAAKKGAFERLFQHLERSLDALHLSSFGLMDTTLEEVFLKVSEEDQSLENSEA 1334
Query: 161 YCQDTRK 167
+++RK
Sbjct: 1335 DVKESRK 1341
>gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform b
[Homo sapiens]
Length = 2466
Score = 31.2 bits (69), Expect = 1.7
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 101 LSKLSPAQQARKAFLEDVEAHLTPHPLALYLNLEEAMPIELLSKVLEVLDPDRKLEDTWA 160
LS + P++ A+K E + HL AL+L+ M L L+V + D+ LE++ A
Sbjct: 1305 LSYILPSEAAKKGAFERLFQHLERSLDALHLSSFGLMDTTLEEVFLKVSEEDQSLENSEA 1364
Query: 161 YCQDTRK 167
+++RK
Sbjct: 1365 DVKESRK 1371
>gi|14165274 golgi-associated microtubule-binding protein HOOK3
[Homo sapiens]
Length = 718
Score = 30.8 bits (68), Expect = 2.2
Identities = 67/305 (21%), Positives = 126/305 (41%), Gaps = 28/305 (9%)
Query: 71 VEGFLPQIYHRAPQLAPKKRQIKLLKEADVL---SKLSPAQQARKA-----FLEDVEAHL 122
+EG + + L +RQ+KLL+E + + + +S ++ RKA LE + +
Sbjct: 316 LEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQV 375
Query: 123 TPHPLALYLNLEEAMPIELLSKVL-EVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHST 181
L ++A ++ K L E +D +K +D +D+ K E + ++
Sbjct: 376 VELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEG 435
Query: 182 QVY------LGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENGISDIDEEFILK 235
Q+ LG S+++S S A + + E K+ L L++ G SD ++ +L+
Sbjct: 436 QLTTQGLMPLG-SQESSDSLAAEIVTPEIREKLIRLQHENKMLKLNQEG-SDNEKIALLQ 493
Query: 236 QFDIDYETKPSHDALHTMKLNQVPLELKRSVGL---------SKLQETEFFQKLGYE--R 284
D + + +NQ LE++ V SK +++ +K E
Sbjct: 494 SLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDSVLLKKKLEEHLE 553
Query: 285 KLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEE 344
KL + N + K + N K + + E L E K EE +KK L++ +
Sbjct: 554 KLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKS 613
Query: 345 LLADL 349
++ L
Sbjct: 614 VIRTL 618
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 30.4 bits (67), Expect = 2.9
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 24/190 (12%)
Query: 164 DTRKGMKEPTKLLKKHSTQVYLGPSKKTSV-SNAGQWLYEEKPHKMDLLHENGPRPGLHE 222
+ K KE T +++KH T++ ++ ++ + Q L ++ +M+ L E
Sbjct: 597 EKNKHNKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQQYQTEMEKLREK-------- 648
Query: 223 NGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQE--TEFFQKL 280
+ ++E +LK +I ++ H ++N+ LE K V ++L+ +E + L
Sbjct: 649 ---CEQEKETLLKDKEIIFQA-------HIEEMNEKTLE-KLDVKQTELESLSSELSEVL 697
Query: 281 GYERKLQKPQNPYKPKWVKMRYG--AWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKE 338
KL++ + K + KM+ A K +Q+VD + + EVS + E+ K +
Sbjct: 698 KARHKLEEELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQ 757
Query: 339 LQEQEELLAD 348
+ + E LL +
Sbjct: 758 INQLELLLKE 767
>gi|122937341 hypothetical protein LOC388960 [Homo sapiens]
Length = 922
Score = 30.4 bits (67), Expect = 2.9
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 284 RKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVS--HKAQEENFKKELQE 341
R L KPQN + + + L P+ W+K V EP++ ++ + + E K++ Q+
Sbjct: 836 RSLPKPQNQFLIQ-------DFSLQPRPWRKPTVPEPVMSTPITEEQRPEREAMKRKAQQ 888
Query: 342 QEE 344
+ E
Sbjct: 889 ERE 891
>gi|28274705 family with sequence similarity 9, member A [Homo
sapiens]
Length = 332
Score = 30.4 bits (67), Expect = 2.9
Identities = 32/133 (24%), Positives = 47/133 (35%), Gaps = 19/133 (14%)
Query: 168 GMKEPTKLLKKH-STQVYLGPSKKTSVSNAGQWLYEEKPHKMDLLHENGPRPGLHENGIS 226
G K K K QV P+KK + K D E P E ++
Sbjct: 48 GRKRSRKAAKAQLEAQVRAAPAKK----------HTGKDPVRDECEERNPFTETREEDVT 97
Query: 227 DIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLGYERKL 286
D E + K H +HTMKL + ++K+ GL+ +E K Y +
Sbjct: 98 DEHGE------REPFAEKDEHTGIHTMKLEHIAADIKK--GLAAKREMIKIDKAAYRKTK 149
Query: 287 QKPQNPYKPKWVK 299
+ K K +K
Sbjct: 150 NTIERALKKKQLK 162
>gi|121582655 ankyrin repeat domain 35 [Homo sapiens]
Length = 1001
Score = 30.4 bits (67), Expect = 2.9
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Query: 222 ENGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKLG 281
E G +++ E + D HDALH L + LQ+ ++ G
Sbjct: 195 EKGSAEVAELLLSHGADAGAVDSTGHDALH------YALHTQDKALWRHLQQALSRRRRG 248
Query: 282 YERKLQKPQ-----NPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFK 336
+R +Q P +P +P+ +W P+ ++++ DE E K +EE K
Sbjct: 249 GQRLVQHPDLASQASPSEPQAGSPPKSSWRAEPEEEQEEKEDEDPCSEEWRWKYEEERRK 308
Query: 337 KELQEQE 343
EQE
Sbjct: 309 VVRLEQE 315
>gi|29550928 sulfotransferase family, cytosolic, 1B, member 1 [Homo
sapiens]
Length = 296
Score = 30.0 bits (66), Expect = 3.8
Identities = 12/43 (27%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 299 KMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQE 341
K+ YG+W+ + K W K++ + P++ + ++ +EN K+E+++
Sbjct: 167 KVAYGSWFTHVKNWWKKKEEHPIL--FLYYEDMKENPKEEIKK 207
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 30.0 bits (66), Expect = 3.8
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 72 EGFLPQIYHRAPQLAPKKRQIKLLKEADVLSKLSPAQQARKAFLEDVEAHLTPHPLAL-- 129
+G Q+ + L K++Q+K + E ++ AQQ A E+ EA L AL
Sbjct: 547 QGLRHQVEQLSSSLKQKEQQLKEVAEKQEATRQDHAQQLATA-AEEREASLRERDAALKQ 605
Query: 130 --YLNLEEAMPIELLSKVLEVLDPDRKLEDT 158
L E+A +E+L + L+V + R T
Sbjct: 606 LEALEKEKAAKLEILQQQLQVANEARDSAQT 636
>gi|14251215 Kruppel-like factor 5 [Homo sapiens]
Length = 457
Score = 29.6 bits (65), Expect = 4.9
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 5/100 (5%)
Query: 40 LHSRQLVFPRKGLDDFRKGCPPCTGLVTQVPVEGFLPQIYHRAPQLAPKKRQIKLLKEAD 99
L++ P+ + F+ G PPCT + FLPQ P P ++A+
Sbjct: 263 LNTHTSAVPQTAVKQFQ-GMPPCTYTMPSQ----FLPQQATYFPPSPPSSEPGSPDRQAE 317
Query: 100 VLSKLSPAQQARKAFLEDVEAHLTPHPLALYLNLEEAMPI 139
+L L+P + H P L +N + P+
Sbjct: 318 MLQNLTPPPSYAATIASKLAIHNPNLPTTLPVNSQNIQPV 357
>gi|7662284 microtubule associated monoxygenase, calponin and LIM
domain containing 2 [Homo sapiens]
Length = 1124
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 307 LNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLHGTVAF-KDFILSRG 363
L+ LW+ Q+V+E ++ + A E K ++E+ LA + G F ++ +LS+G
Sbjct: 836 LSGVLWRLQQVEEKILQKRAQNLANREFHTKNIKEKAAHLASMFGHGDFPQNKLLSKG 893
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 29.3 bits (64), Expect = 6.4
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 270 KLQETEFFQKLGYERKLQKPQNPYKPKWVKMRY---GAWYLNPKLWKKQRVDEPLVDPEV 326
K+QE E ++ E+K+++ + + + KM+ W K W++QR+ E
Sbjct: 445 KMQEEERIRER--EKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWE 502
Query: 327 SHKAQEENFKKELQEQEELLAD 348
K QE+ ++++ EQEE + D
Sbjct: 503 QEKMQEQ--EEKIWEQEEKIRD 522
Score = 29.3 bits (64), Expect = 6.4
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Query: 278 QKLGYERKLQKPQNPYKPKWVKMR--YGAWYLNPKLWKKQRV----------DEPLVDPE 325
+KL + K+Q+ + + K+R W K+W+++++ +E + D E
Sbjct: 498 EKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQE 557
Query: 326 VSHKAQEENFKKELQEQEE 344
QEE +K+ QEQE+
Sbjct: 558 QKMWDQEERMEKKTQEQEK 576
Score = 28.9 bits (63), Expect = 8.4
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 270 KLQETEFFQKLG-YERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSH 328
K+QE E +K+ E K+Q+ + + KM W K+W++QR+ E
Sbjct: 618 KMQEQE--EKMWEQEEKMQEQEEKMWEQEEKM----WEQEEKMWEQQRLPEQKEKLWEHE 671
Query: 329 KAQEENFKKELQEQEE 344
K QE+ +++QEQEE
Sbjct: 672 KMQEQ---EKMQEQEE 684
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 29.3 bits (64), Expect = 6.4
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 270 KLQETEFFQKLGYERKLQKPQNPYKPKWVKMRY---GAWYLNPKLWKKQRVDEPLVDPEV 326
K+QE E ++ E+K+++ + + + KM+ W K W++QR+ E
Sbjct: 387 KMQEEERIRER--EKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWE 444
Query: 327 SHKAQEENFKKELQEQEELLAD 348
K QE+ ++++ EQEE + D
Sbjct: 445 QEKMQEQ--EEKIWEQEEKIRD 464
>gi|20270373 T-cell activation Rho GTPase-activating protein isoform
c [Homo sapiens]
Length = 266
Score = 29.3 bits (64), Expect = 6.4
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 84 QLAPKKRQIKLLKEADVLSKLSPAQQARKAFLEDVEAHLTPHPLALYLNLEEAM--PIEL 141
QL K++ K+L ++ +LSPA A D++A L PL++ + + PI+
Sbjct: 47 QLIEVKKRKKVLSWPFLMRRLSPASDFSGALETDLKASLFDQPLSIICGDSDTLPRPIQD 106
Query: 142 LSKVLEVLDPDRKLEDTWAYCQDTRKGMKE 171
+ +L + P + A + RK +KE
Sbjct: 107 ILTILCLKGPSTEGIFRRAANEKARKELKE 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,993,202
Number of Sequences: 37866
Number of extensions: 822919
Number of successful extensions: 2340
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 2284
Number of HSP's gapped (non-prelim): 76
length of query: 393
length of database: 18,247,518
effective HSP length: 104
effective length of query: 289
effective length of database: 14,309,454
effective search space: 4135432206
effective search space used: 4135432206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.