C2orf78 2589

Name: C2orf78	Sequence: fasta or formatted (922aa)		NCBI GI: 122937341
Description: hypothetical protein LOC388960		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 62 2 C cysteine 1.0 9 1 D aspartate 2.9 27 1 E glutamate 5.5 51 2 F phenylalanine 2.2 20 2 G glycine 4.3 40 1 H histidine 1.8 17 1 I isoleucine 3.9 36 1 K lysine 6.7 62 2 L leucine 7.8 72 2 M methionine 2.1 19 1 N asparagine 4.6 42 1 P proline 8.9 82 3 Q glutamine 7.3 67 2 R arginine 3.5 32 2 S serine 14.9 137 3 T threonine 7.4 68 2 V valine 5.5 51 3 W tryptophan 0.7 6 1 Y tyrosine 2.4 22 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC388960 NEFH 0.025 neurofilament, heavy polypeptide 200kDa RERE 0.019 atrophin-1 like protein isoform a RERE 0.019 atrophin-1 like protein isoform a PRG4 0.019 proteoglycan 4 isoform B PRG4 0.019 proteoglycan 4 isoform A PRG4 0.018 proteoglycan 4 isoform D PRG4 0.018 proteoglycan 4 isoform C RERE 0.017 atrophin-1 like protein isoform b MUC12 0.016 PREDICTED: mucin 12 SRRM2 0.016 splicing coactivator subunit SRm300 MUC2 0.014 mucin 2 precursor NOLC1 0.014 nucleolar and coiled-body phosphoprotein 1 MUC17 0.013 mucin 17 GLTSCR1 0.013 glioma tumor suppressor candidate region gene 1 [Ho... LOC100170229 0.013 hypothetical protein LOC100170229 FLJ22184 0.013 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.012 PREDICTED: hypothetical protein LOC80164 HP1BP3 0.012 HP1-BP74 FAM71E2 0.012 hypothetical protein LOC284418 BRD4 0.012 bromodomain-containing protein 4 isoform long NACA 0.012 nascent polypeptide-associated complex alpha subuni... SRRM1 0.012 serine/arginine repetitive matrix 1 ASXL3 0.012 additional sex combs like 3 USP36 0.011 ubiquitin specific peptidase 36 KIAA1949 0.011 phostensin KIAA1949 0.011 phostensin PRPF4B 0.011 serine/threonine-protein kinase PRP4K ZNF828 0.011 zinc finger protein 828 MUC7 0.011 mucin 7, secreted precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.