Guide to the Human Genome
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Name: TAGAP Sequence: fasta or formatted (266aa) NCBI GI: 20270373
Description:

T-cell activation Rho GTPase-activating protein isoform c

Referenced in:

Rho and Rac
T cells

Other entries for this name:
alt prot [731aa] T-cell activation Rho GTPase-activating protein isoform b
alt prot [553aa] T-cell activation Rho GTPase-activating protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         17           2
 C cysteine            2.6          7           1
 D aspartate           6.8         18           1
 E glutamate           8.6         23           2
 F phenylalanine       3.0          8           1
 G glycine             3.0          8           1
 H histidine           1.9          5           1
 I isoleucine          5.6         15           2
 K lysine              7.5         20           2
 L leucine            15.8         42           4
 M methionine          2.6          7           1
 N asparagine          5.3         14           2
 P proline             4.5         12           1
 Q glutamine           3.0          8           1
 R arginine            5.3         14           2
 S serine              9.8         26           2
 T threonine           2.6          7           1
 V valine              4.1         11           2
 W tryptophan          0.8          2           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   T-cell activation Rho GTPase-activating protein isof... 
TAGAP                 0.982   T-cell activation Rho GTPase-activating protein isof...
TAGAP                 0.283   T-cell activation Rho GTPase-activating protein isof...
ARHGAP20              0.257   Rho GTPase activating protein 20 
ARHGAP1               0.148   Rho GTPase activating protein 1 
MYO9A                 0.146   myosin IXA 
SH3BP1                0.142   SH3-domain binding protein 1 
ARHGAP17              0.132   nadrin isoform 1 
ARHGAP17              0.132   nadrin isoform 2 
RICH2                 0.132   Rho GTPase-activating protein RICH2 
LOC553158             0.126   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.126   Rho GTPase activating protein 8 isoform 2 
ARHGAP8               0.126   Rho GTPase activating protein 8 isoform 1 
GRLF1                 0.108   glucocorticoid receptor DNA binding factor 1 
MYO9B                 0.108   myosin IXB isoform 2 
MYO9B                 0.108   myosin IXB isoform 1 
ARHGAP15              0.104   ARHGAP15 
ARHGAP4               0.102   Rho GTPase activating protein 4 
ARHGAP21              0.102   Rho GTPase activating protein 21 
SRGAP3                0.098   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
DLC1                  0.096   deleted in liver cancer 1 isoform 1 
DLC1                  0.096   deleted in liver cancer 1 isoform 2 
SRGAP2                0.096   SLIT-ROBO Rho GTPase activating protein 2 isoform a...
SRGAP2                0.096   SLIT-ROBO Rho GTPase activating protein 2 isoform b...
ARHGAP27              0.092   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.092   Rho GTPase activating protein 27 isoform a 
ARHGAP5               0.090   Rho GTPase activating protein 5 isoform b 
SRGAP3                0.090   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
ARHGAP5               0.090   Rho GTPase activating protein 5 isoform a 
ARHGAP6               0.090   Rho GTPase activating protein 6 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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