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Search of human proteins with 209977052
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209977052 transmembrane protein 51 [Homo sapiens]
(253 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209977056 transmembrane protein 51 [Homo sapiens] 507 e-144
gi|209977054 transmembrane protein 51 [Homo sapiens] 507 e-144
gi|209977052 transmembrane protein 51 [Homo sapiens] 507 e-144
gi|8922277 transmembrane protein 51 [Homo sapiens] 507 e-144
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 45 5e-05
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 42 4e-04
gi|60460889 Myb protein P42POP [Homo sapiens] 41 9e-04
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 39 0.006
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 37 0.016
gi|55741677 SET domain containing 1A [Homo sapiens] 37 0.016
gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sap... 37 0.016
gi|51873049 hypothetical protein LOC8603 [Homo sapiens] 37 0.016
gi|116875765 tight junction protein 1 isoform b [Homo sapiens] 37 0.022
gi|116875767 tight junction protein 1 isoform a [Homo sapiens] 37 0.022
gi|4557543 extracellular matrix protein 2 precursor [Homo sapiens] 35 0.048
gi|7657465 podocalyxin-like 2 [Homo sapiens] 35 0.063
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 35 0.063
gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.082
gi|110349786 Alstrom syndrome 1 [Homo sapiens] 35 0.082
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 35 0.082
gi|32698902 transmembrane protein 61 [Homo sapiens] 35 0.082
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 34 0.11
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 34 0.11
gi|66472382 nischarin [Homo sapiens] 34 0.14
gi|31377846 WD repeat domain 52 [Homo sapiens] 34 0.14
gi|169636420 carbonic anhydrase IX precursor [Homo sapiens] 33 0.18
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 33 0.18
gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo s... 33 0.18
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 33 0.24
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] 33 0.24
>gi|209977056 transmembrane protein 51 [Homo sapiens]
Length = 253
Score = 507 bits (1305), Expect = e-144
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS
Sbjct: 1 MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
Query: 61 KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE
Sbjct: 61 KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
Query: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE
Sbjct: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
Query: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD
Sbjct: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
Query: 241 EVQEKAPDTRPPD 253
EVQEKAPDTRPPD
Sbjct: 241 EVQEKAPDTRPPD 253
>gi|209977054 transmembrane protein 51 [Homo sapiens]
Length = 253
Score = 507 bits (1305), Expect = e-144
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS
Sbjct: 1 MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
Query: 61 KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE
Sbjct: 61 KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
Query: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE
Sbjct: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
Query: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD
Sbjct: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
Query: 241 EVQEKAPDTRPPD 253
EVQEKAPDTRPPD
Sbjct: 241 EVQEKAPDTRPPD 253
>gi|209977052 transmembrane protein 51 [Homo sapiens]
Length = 253
Score = 507 bits (1305), Expect = e-144
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS
Sbjct: 1 MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
Query: 61 KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE
Sbjct: 61 KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
Query: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE
Sbjct: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
Query: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD
Sbjct: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
Query: 241 EVQEKAPDTRPPD 253
EVQEKAPDTRPPD
Sbjct: 241 EVQEKAPDTRPPD 253
>gi|8922277 transmembrane protein 51 [Homo sapiens]
Length = 253
Score = 507 bits (1305), Expect = e-144
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS
Sbjct: 1 MMAQSKANGSHYALTAIGLGMLVLGVIMAMWNLVPGFSAAEKPTAQGSNKTEVGGGILKS 60
Query: 61 KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE
Sbjct: 61 KTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEE 120
Query: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE
Sbjct: 121 EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVE 180
Query: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD
Sbjct: 181 ASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYD 240
Query: 241 EVQEKAPDTRPPD 253
EVQEKAPDTRPPD
Sbjct: 241 EVQEKAPDTRPPD 253
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 45.4 bits (106), Expect = 5e-05
Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 80 SICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMN 139
S+ + + ++++GE + P+ A+ EEE E+ EA S P+ E ++
Sbjct: 599 SVPQDLNHELQEQEGEPVP----PSNVEAIAEHAVLSEEENEEFEAYSPAAAPTSESSLS 654
Query: 140 TNYSEARGEEQNPRLSISLPSYESLTGLDET------TPTSTRADVEASPGNPPDRQNSK 193
+ +E E Q+P S P Y L+G DE TP ST A + P K
Sbjct: 655 PSTTEKTSENQSPLFSTVTPEYMVLSG-DEASESGCYTPDSTSASEYSVPSLATKESLKK 713
Query: 194 LAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPDTRPP 252
R PL ++ + + ++ D P++ P + P EK + + P
Sbjct: 714 TIDRKSPLILKGVSEYMIPSEE----KEDTGSFTPAVAPASEPSLSPSTTEKTSECQSP 768
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 42.4 bits (98), Expect = 4e-04
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 111 QEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNP--RLSISLPSYESLTGLD 168
QE++ EEE+E+A R PS E+ + S + G+ Q P R P S ++
Sbjct: 934 QEKEESSSEEEEEKAEERPRRPSQEQ----SASASSGQPQAPLNRERPESPMVPSEQVVE 989
Query: 169 ETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPP 228
E P +A + G+ R+ A+ L +K + E + R+ P ++PP
Sbjct: 990 EAVPLPPQALTTSQDGH--RRKGDSEAEALSEIKDGSLPPELSCIPSHRVLGPPTSIPPE 1047
Query: 229 SIEPLTPPPQYDEVQEKAPDTRPPD 253
+ P++ + +E +P PD
Sbjct: 1048 PLGPVSMDSECEESLAASPMAAKPD 1072
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 41.2 bits (95), Expect = 9e-04
Identities = 49/184 (26%), Positives = 63/184 (34%), Gaps = 42/184 (22%)
Query: 90 KQRQGEDLAHVQHPT-GAGPHAQEEDSQEEE-------------------EEDEEAASRY 129
K+R E LA V H T GAGP A++ S EEE EE A S
Sbjct: 84 KRRTKEKLARVPHSTQGAGPAAEDAFSAEEETIFAILGPGVAAPGAGAGAEEPPAAPSSQ 143
Query: 130 YVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNP-PD 188
P SE R E++ S S G P + + G P P
Sbjct: 144 PPPPSACPQRYVLSEDRREDRRADTSA-----HSKAGSSSPEPWARPSCTPQEGGCPRPK 198
Query: 189 RQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPD 248
+ S L+P+++ R+ PPP PL PPP +V P
Sbjct: 199 ERESPPPSALQPVQLPRLALS----------------PPPPAPPLPPPPPLAQVAPSPPS 242
Query: 249 TRPP 252
PP
Sbjct: 243 PPPP 246
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 38.5 bits (88), Expect = 0.006
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 165 TGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLK---PLKVRRIKSEKLHLKDFR-INL 220
T LDET+ S ++V S +++ +K+AK + + + H+K + I L
Sbjct: 3047 TSLDETS--SKVSNVHVSNNKNSEQKENKIAKEKTVQHQVAAHHEATVRSHVKTHQEIKL 3104
Query: 221 PDKNVPPPSIEPLTPPPQYDEVQEKAPDTRPP 252
D N+PPPS++ P P + ++ A T P
Sbjct: 3105 DDSNIPPPSLKTRPPSPTFITIESTARRTENP 3136
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 37.0 bits (84), Expect = 0.016
Identities = 31/155 (20%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 87 DKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEAR 146
D + + E + +G+G + E D+++++E++E+ S E+ ++ +
Sbjct: 692 DSDPESESESDSKSSSESGSGESSSESDNEDQDEDEEKGRGSESEQSEED--GKRKTKKK 749
Query: 147 GEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGN-----PPDRQNSKLAKRLKPL 201
E+ S S +S + E+ TS + + P + PP +++ K +
Sbjct: 750 VPERKGEASSSDEGSDSSSSSSESEMTSESEEEQLEPASWSRKTPPSSKSAPATKEI--- 806
Query: 202 KVRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPP 236
L L+DF PPS++P++PP
Sbjct: 807 -------SLLDLEDF---------TPPSVQPVSPP 825
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 37.0 bits (84), Expect = 0.016
Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 14/163 (8%)
Query: 86 RDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEA 145
R K + + + A A + E +E++EEDEE R EE ++T E
Sbjct: 948 RGKTQGKHRKSFALDSEGEEASQESSSEKDEEDDEEDEEDEDR------EEAVDTTKKET 1001
Query: 146 R---GEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLK 202
GE++ S Y G +++T +D E+S + +S +
Sbjct: 1002 EVSDGEDEESDSSSKCSLYADSDGENDST-----SDSESSSSSSSSSSSSSSSSSSSSSS 1056
Query: 203 VRRIKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEK 245
SE ++ LP + PP + TP P V E+
Sbjct: 1057 SSESSSEDEEEEERPAALPSASPPPREVPVPTPAPVEVPVPER 1099
>gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sapiens]
Length = 2211
Score = 37.0 bits (84), Expect = 0.016
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 85 IRDKRKQRQG---EDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTN 141
++ K+K+R+G ED + + + + EE+ EEEEE+EE + P +EV+ +
Sbjct: 936 LQRKKKKRKGSDEEDEGEEEESSSSEESSSEEEEMEEEEEEEE-----FGPGMQEVIEQH 990
Query: 142 YSE-----ARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPP 187
E ARG+E N + +P+ + P +V+ GN P
Sbjct: 991 KFEAHRWLARGKEDNELVVELVPA-------GKPGPERNTYEVQVVTGNVP 1034
>gi|51873049 hypothetical protein LOC8603 [Homo sapiens]
Length = 1224
Score = 37.0 bits (84), Expect = 0.016
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 86 RDKRKQRQGEDLAHVQHPTGAGPHA--QEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYS 143
R + KQR+ E+ A ++ A H QEE + EEEEDEE + ++ +
Sbjct: 871 RARHKQRKLEEKARLEAEARAREHLHLQEEQRRREEEEDEEEEEDRFKEEFQRLQELQKL 930
Query: 144 EARGEEQNPRLSISLPSYESLT 165
A +++ R S P + LT
Sbjct: 931 RAVKKKKKERPSKDCPKLDMLT 952
>gi|116875765 tight junction protein 1 isoform b [Homo sapiens]
Length = 1668
Score = 36.6 bits (83), Expect = 0.022
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 21/158 (13%)
Query: 109 HAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLD 168
H+Q+ DS++ EE E R Y P +EE +Y EQ PR S + G D
Sbjct: 1030 HSQDLDSRQHPEESSE---RGYFPRFEEPAPLSYDSRPRYEQAPRASALRHEEQPAPGYD 1086
Query: 169 ETTPTSTRADVEASPGNPPD------RQNSKLAKRLKP--LKVRRIKSEKLH-------L 213
A S G P Q S+ +++ P R E LH L
Sbjct: 1087 THGRLRPEAQPHPSAGPKPAESKQYFEQYSRSYEQVPPQGFTSRAGHFEPLHGAAAVPPL 1146
Query: 214 KDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPDTRP 251
+ P+ P + +PL PPP E +E+ P +P
Sbjct: 1147 IPSSQHKPE--ALPSNTKPLPPPPTQTE-EEEDPAMKP 1181
>gi|116875767 tight junction protein 1 isoform a [Homo sapiens]
Length = 1748
Score = 36.6 bits (83), Expect = 0.022
Identities = 43/158 (27%), Positives = 61/158 (38%), Gaps = 21/158 (13%)
Query: 109 HAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLD 168
H+Q+ DS++ EE E R Y P +EE +Y EQ PR S + G D
Sbjct: 1110 HSQDLDSRQHPEESSE---RGYFPRFEEPAPLSYDSRPRYEQAPRASALRHEEQPAPGYD 1166
Query: 169 ETTPTSTRADVEASPGNPPD------RQNSKLAKRLKP--LKVRRIKSEKLH-------L 213
A S G P Q S+ +++ P R E LH L
Sbjct: 1167 THGRLRPEAQPHPSAGPKPAESKQYFEQYSRSYEQVPPQGFTSRAGHFEPLHGAAAVPPL 1226
Query: 214 KDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAPDTRP 251
+ P+ P + +PL PPP E +E+ P +P
Sbjct: 1227 IPSSQHKPE--ALPSNTKPLPPPPTQTE-EEEDPAMKP 1261
>gi|4557543 extracellular matrix protein 2 precursor [Homo sapiens]
Length = 699
Score = 35.4 bits (80), Expect = 0.048
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 89 RKQRQGED--LAHVQHPTGAGPHAQEEDSQEEEEEDEE 124
RKQR GE+ LAH Q G EE+ EE EEDEE
Sbjct: 250 RKQRPGEERRLAHQQQRQGREEEEDEEEEGEEGEEDEE 287
>gi|7657465 podocalyxin-like 2 [Homo sapiens]
Length = 605
Score = 35.0 bits (79), Expect = 0.063
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 100 VQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRL-SISL 158
V+ P P +EE+ +EEEE ++E + EE++ N S+ EE P++ SL
Sbjct: 152 VEPPWHMPPREEEEEEEEEEEREKEEVEKQEEEEEEELLPVNGSQ---EEAKPQVRDFSL 208
Query: 159 PSYESLTGL------DETTPTSTRADVEASPG 184
S G D S+ +VE+S G
Sbjct: 209 TSSSQTPGATKSRHEDSGDQASSGVEVESSMG 240
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 35.0 bits (79), Expect = 0.063
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 1/156 (0%)
Query: 87 DKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEAR 146
+ R +R+ E + A++E+ + +++ EEA +R + + + +
Sbjct: 641 EARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQ 700
Query: 147 GEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKP-LKVRR 205
E++ L T E + T + D + + N + K + P L+
Sbjct: 701 QEQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPGLQKEA 760
Query: 206 IKSEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDE 241
++ E+ ++ + +LP K +P + L P P + E
Sbjct: 761 VQKEEPIPQEPQWSLPSKELPASLVNGLQPLPAHQE 796
Score = 28.5 bits (62), Expect = 5.9
Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 25/190 (13%)
Query: 87 DKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMN------T 140
++RK G A V+ A P ++E +E E ++E ++ S ++ +
Sbjct: 390 ERRKPNAGGSPAPVRRRPEASPVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRA 449
Query: 141 NYSEARGEEQNPRLSISLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKP 200
S + E +P+ S + PS S + +P + P PP + + + + +
Sbjct: 450 RLSASTASELSPK-SKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRV 508
Query: 201 LKVRRIK-------------SEKLHLKDFRINLPDKNVPPPSIEPLTPPPQYDEVQEKAP 247
+ K S++ + P P P+ P PPQ ++ + P
Sbjct: 509 RRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETP 568
Query: 248 D-----TRPP 252
T PP
Sbjct: 569 TDAAVLTSPP 578
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 34.7 bits (78), Expect = 0.082
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 15/154 (9%)
Query: 106 AGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLT 165
A P E E E+E + S EE + S R EE+ + YE +
Sbjct: 9477 AVPQRVEVTRHEVSAEEEWSYS-------EEEEGVSISVYREEEREEEEEAEVTEYEVME 9529
Query: 166 GLDETTPTST----RADVEASPGNPPDRQNSKLAKRLK-PLKVRRIKSEKLHLKDFRINL 220
+E VEA P +RQ K+ + K P K+ K+ +I +
Sbjct: 9530 EPEEYVVEEKLHIISKRVEAEPAEVTERQEKKIVLKPKIPAKIEEPPPAKVPEAPKKI-V 9588
Query: 221 PDKNVPPP--SIEPLTPPPQYDEVQEKAPDTRPP 252
P+K VP P E + PP +E ++ P+ + P
Sbjct: 9589 PEKKVPAPVPKKEKVPPPKVPEEPKKPVPEKKVP 9622
Score = 32.0 bits (71), Expect = 0.53
Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 38/167 (22%)
Query: 111 QEEDSQEEEE---EDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGL 167
+EE EEEE E+EE +P EEV+ EE+ P +P E
Sbjct: 10116 EEEVLPEEEEVLPEEEEV-----LPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPE 10170
Query: 168 DETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKV-----------------RRIKSEK 210
+E P E P P ++ K++ KV ++++ ++
Sbjct: 10171 EEVLP-------EVKPKVPVPAPVPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKVEEKR 10223
Query: 211 LHLKDFRINLPDKNVPPPSIEPLT------PPPQYDEVQEKAPDTRP 251
+ L LP + P EP++ PP +EV+E AP P
Sbjct: 10224 IILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVP 10270
Score = 29.6 bits (65), Expect = 2.6
Identities = 33/140 (23%), Positives = 46/140 (32%), Gaps = 21/140 (15%)
Query: 108 PHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGL 167
P E + EEE Y V EE ++ EE P + + +P
Sbjct: 9900 PKELEPEEVAFEEEVVTHVEEYLVEEEEEYIHEEEEFITEEEVVPVIPVKVPEVPRKPVP 9959
Query: 168 DETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPP 227
+E P EA P P+ V + EK+ + +P K PP
Sbjct: 9960 EEKKPVPVPKKKEAPPAKVPE--------------VPKKPEEKVP-----VLIPKKEKPP 10000
Query: 228 PSIEPLTPPPQYDEVQEKAP 247
P+ P P E EK P
Sbjct: 10001 PAKVPEVPKKPVPE--EKVP 10018
Score = 28.9 bits (63), Expect = 4.5
Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 25/134 (18%)
Query: 112 EEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETT 171
EE+ EEE EE PS EEV E PR+ E +
Sbjct: 10242 EEEPISEEEIPEEP------PSIEEVE---------EVAPPRVP------EVIKKAVPEA 10280
Query: 172 PTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPPPSIE 231
PT VEA PP + + K+ + P+ V++ ++ + + +P+K V P E
Sbjct: 10281 PTPVPKKVEA----PPAKVSKKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKVLVPKKE 10336
Query: 232 PLTPPPQYDEVQEK 245
+ P ++EK
Sbjct: 10337 AVPPAKGRTVLEEK 10350
Score = 28.9 bits (63), Expect = 4.5
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 220 LPDKNVP-PPSIEPLTPPPQYDEV-QEKAPDTRPP 252
+P+K VP PP+ +P PPP+ E +E P+ + P
Sbjct: 10505 VPEKKVPVPPAKKPEAPPPKVPEAPKEVVPEKKVP 10539
Score = 28.1 bits (61), Expect = 7.7
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 13/131 (9%)
Query: 131 VPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDETT-PTSTRADVEASPGNPPDR 189
+P EE E + + R I LP E + ++ T P E P PP
Sbjct: 10201 IPKKEEAPPAKVPEVPKKVEEKR--IILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSI 10258
Query: 190 QN-SKLAKRLKPLKVRRIKSE-------KLHLKDFRIN--LPDKNVPPPSIEPLTPPPQY 239
+ ++A P +++ E K+ +++ +P++ VP P + PP +
Sbjct: 10259 EEVEEVAPPRVPEVIKKAVPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQKKEAPPAKV 10318
Query: 240 DEVQEKAPDTR 250
EV +K P+ +
Sbjct: 10319 PEVPKKVPEKK 10329
>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
Length = 4169
Score = 34.7 bits (78), Expect = 0.082
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 111 QEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDET 170
+EE+ +EEEEE+EEAA+ + V+ E G E + S S + L +D+
Sbjct: 16 EEEEEEEEEEEEEEAAAAAAANVDDVVVVEEVEEEAGRELD---SDSHYGPQHLESIDDE 72
Query: 171 TPTSTRADVEASPG------NPPDRQNSK 193
+A ++A PG +PP + S+
Sbjct: 73 EDEEAKAWLQAHPGRILPPLSPPQHRYSE 101
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 34.7 bits (78), Expect = 0.082
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 99 HVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSY----EEVMNTNYSEARGEEQNPRL 154
H Q +G + E+DSQ+EEEE+EE +E + + SE +E P +
Sbjct: 2415 HTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDDDGSEMELDEDYPDM 2474
Query: 155 SIS-LPSYESLTGLDE-----TTPTSTRADVEASPGNPP 187
+ S L +E D+ S+ D+ SPGN P
Sbjct: 2475 NASPLVRFERFDREDDLIIEFDNMFSSATDIPPSPGNIP 2513
Score = 30.8 bits (68), Expect = 1.2
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 74 VMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGP----HAQEEDSQEEEEEDEEAASRY 129
++ LL IC RD + Q + A P HA EE S E+EEE+E A +
Sbjct: 681 IIKLLEEICNLGRDPKYICQKPSIQKADGTATAPPPRSNHAAEEASSEDEEEEEVQAMQS 740
Query: 130 YVPSYEEVMNTNYSEARGEEQNP 152
+ + + N EE+ P
Sbjct: 741 FNSTQQNETEPNQQVVGTEERIP 763
>gi|32698902 transmembrane protein 61 [Homo sapiens]
Length = 210
Score = 34.7 bits (78), Expect = 0.082
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 63/219 (28%)
Query: 1 MMAQSKANGSH------YALTAIGLGMLVLGVIMAMW------NLVPGFSA--AEKPTAQ 46
M +GSH Y +T G +LV G + W PG A E P +
Sbjct: 1 MALPQMCDGSHLASTLRYCMTVSGTVVLVAGTLCFAWWSEGDATAQPGQLAPPTEYPVPE 60
Query: 47 GSNKTEVGGGILKSKTFSVAYVLVGAGVMLLLLSICLSIRDKRKQRQGEDLAHVQHPTGA 106
G + +L+S V++V GAG +LLL+ + S++ A + P
Sbjct: 61 GPSP------LLRS----VSFVCCGAGGLLLLIGLLWSVK-----------ASIPGPPRW 99
Query: 107 GPHAQEED-----SQEEEEEDEEAASRYYVPSYEEVMNTNYSE----------------- 144
P+ D + E+E +P+YEE ++ +E
Sbjct: 100 DPYHLSRDLYYLTVESSEKESCRTPKVVDIPTYEEAVSFPVAEGPPTPPAYPTEEALEPS 159
Query: 145 -ARGEEQNPRLSISLPSYESLT-GLD----ETTPTSTRA 177
+R + + + PSYES++ LD ETTP++TR+
Sbjct: 160 GSRDALLSTQPAWPPPSYESISLALDAVSAETTPSATRS 198
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 34.3 bits (77), Expect = 0.11
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 13/148 (8%)
Query: 103 PTGAGPHAQ------EEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSI 156
PTG+ P + EE+ +EEEEE+EE + ++ G + LS
Sbjct: 253 PTGSNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQSISRISETLAGIYDDNSLSQ 312
Query: 157 SLPSYESLTGLDETTPTSTRADVEASPGNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDF 216
P ES P + +PG PP +++ ++ +V + +E ++
Sbjct: 313 DFPGDES------PRPDAQPTQPTPAPGTPPQVDSTRADGAMR-RRVFVVGTEAEACREG 365
Query: 217 RINLPDKNVPPPSIEPLTPPPQYDEVQE 244
++++ ++ P PP E++E
Sbjct: 366 KVSVEVVTAGGAALPPPLLPPGDSEIEE 393
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 34.3 bits (77), Expect = 0.11
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 104 TGAGPHAQEEDSQEEEEEDEEA 125
+G GP EE+ +EEEEEDEEA
Sbjct: 67 SGGGPGGDEEEDEEEEEEDEEA 88
>gi|66472382 nischarin [Homo sapiens]
Length = 1504
Score = 33.9 bits (76), Expect = 0.14
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 101 QHPTGAGPHAQEEDSQEEEEEDEEAASRYY---VPSYEEVMNTNYSEARGEEQ 150
Q G G +EED +EEEEED A +RY+ P EE E EE+
Sbjct: 627 QREEGQGEQGEEEDEEEEEEED-VAENRYFEMGPPDVEEEEGGGQGEEEEEEE 678
>gi|31377846 WD repeat domain 52 [Homo sapiens]
Length = 982
Score = 33.9 bits (76), Expect = 0.14
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 85 IRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSE 144
+++K ++ + LA G +EE+ +EEEEE+EE ++PS + +
Sbjct: 698 LKEKIREERRNKLAAEMGEDGEKEFQEEEEEKEEEEEEEEPLPEIFIPSTPSPILCGFYS 757
Query: 145 ARGEEQNPRLSISLPSYES 163
G + +SL Y+S
Sbjct: 758 EPG-----KFWVSLGGYDS 771
>gi|169636420 carbonic anhydrase IX precursor [Homo sapiens]
Length = 459
Score = 33.5 bits (75), Expect = 0.18
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 75 MLLLLSICLSIRDKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAASRYYVPSY 134
+LL L + + + +R R ED P G G +++ EE+ EE + R P
Sbjct: 25 LLLSLLLLVPVHPQRLPRMQED-----SPLGGGSSGEDDPLGEEDLPSEEDSPREEDPPG 79
Query: 135 EEVMNTNYSEARGEEQNPRLSISLPSYESLTGLD-ETTPTSTRADVEASPGNPPDRQNS 192
EE + + GEE P + P E L E PT VEA PG+P + QN+
Sbjct: 80 EEDL-PGEEDLPGEEDLPEVK---PKSEEEGSLKLEDLPT-----VEA-PGDPQEPQNN 128
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 33.5 bits (75), Expect = 0.18
Identities = 41/166 (24%), Positives = 66/166 (39%), Gaps = 11/166 (6%)
Query: 87 DKRKQRQGEDLAHVQHPTGAGPHAQEEDSQEE---EEEDEEAASRYYVPSYEEVMNTNYS 143
D +Q Q D +Q+ P A +E+ + EE+D ++ S S +EV+
Sbjct: 230 DDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSDSEDEVLRMKRK 289
Query: 144 EARGEEQNPRLSISLPSYESLT-----GLDETTPTSTRADVEASPGNPPDRQN-SKLAKR 197
A + +P S T G D+ + S D +PG P D + +
Sbjct: 290 NAIASDSEADSDTEVPKDNSGTMDLFGGADDISSGSDGEDKPPTPGQPVDENGLPQDQQE 349
Query: 198 LKPLKVRRIKSEKLHLK-DFRINLPDKNVPP-PSIEPLTPPPQYDE 241
+P+ RI+ E + D +L +P S+EP PQY E
Sbjct: 350 EEPIPETRIEVEIPKVNTDLGNDLYFVKLPNFLSVEPRPFDPQYYE 395
Score = 29.3 bits (64), Expect = 3.4
Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 5/93 (5%)
Query: 89 RKQRQGEDLAHVQHPTGAGPHAQEEDSQEEEEEDEEAAS-----RYYVPSYEEVMNTNYS 143
R++ Q + QH G E D +EEEE EE+ S Y E YS
Sbjct: 548 RRESQQRRMREKQHQRGLSASYLEPDRYDEEEEGEESISLAAIKNRYKGGIREERARIYS 607
Query: 144 EARGEEQNPRLSISLPSYESLTGLDETTPTSTR 176
E + L + LT +E P+ R
Sbjct: 608 SDSDEGSEEDKAQRLLKAKKLTSDEEGEPSGKR 640
>gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo
sapiens]
Length = 486
Score = 33.5 bits (75), Expect = 0.18
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 33/151 (21%)
Query: 110 AQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYESLTGLDE 169
A+E+ +EEEE+ ++ A R E T S E P +++ P+ +
Sbjct: 246 AEEKRKREEEEKAQQVARR----QQERKAVTKRSP---EAPQPVIAMEEPAVPA------ 292
Query: 170 TTPTSTRADVEASP--GNPPDRQNSKLAKRLKPLKVRRIKSEKLHLKDFRINLPDKNVPP 227
P + EA P G PP ++ VR + + L R LP+ N P
Sbjct: 293 --PLPKKISSEAWPPVGTPPSSESEP---------VRTSREHPVPLLPIRQTLPEDNEEP 341
Query: 228 PSIEPLT-------PPPQYDEVQEKAPDTRP 251
P++ P T P Y+ E P+ P
Sbjct: 342 PALPPRTLEGLQVEEEPVYEAEPEPEPEPEP 372
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 33.1 bits (74), Expect = 0.24
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 168 DETTPTSTRADVEASPGNPPDRQNSKLA-KRLKPLKVRRIKSEKLHLK--DFRINLPDKN 224
D P + A + P PP R++S + PLK + L DF LP
Sbjct: 502 DPAVPRAPHAPKSSLPPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDF---LPPPP 558
Query: 225 VPPPSIEPLTPPPQYDEVQEKAPDTRPP 252
PPP +P PPP D E PD PP
Sbjct: 559 PPPPLDDPELPPPPPD-FMEPPPDFVPP 585
>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
Length = 1184
Score = 33.1 bits (74), Expect = 0.24
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 103 PTGAGPHAQEEDSQEEEEEDEEAASRYYVPSYEEVMNTNYSEARGEEQNPRLSISLPSYE 162
P A EDS+EEEEE+EE EE+ T A G L + P+
Sbjct: 265 PVQAKARRVTEDSEEEEEEEEER---------EEMAVTEQLAAGGHRGLDGLPTTAPAGP 315
Query: 163 SLTGLDETTPTSTRADVEASP 183
SL +E RA+ A P
Sbjct: 316 SLPIQEERAEAGARAEAGARP 336
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,835,755
Number of Sequences: 37866
Number of extensions: 618127
Number of successful extensions: 8226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 6527
Number of HSP's gapped (non-prelim): 1136
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.