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Search of human proteins with 209413752
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|209413752 synapsin III isoform IIIa [Homo sapiens]
(580 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|209413752 synapsin III isoform IIIa [Homo sapiens] 1164 0.0
gi|209413756 synapsin III isoform IIIg [Homo sapiens] 1158 0.0
gi|209413754 synapsin III isoform IIIc [Homo sapiens] 886 0.0
gi|19924103 synapsin II isoform IIa [Homo sapiens] 652 0.0
gi|19924099 synapsin I isoform Ia [Homo sapiens] 611 e-175
gi|19924097 synapsin I isoform Ib [Homo sapiens] 595 e-170
gi|19924101 synapsin II isoform IIb [Homo sapiens] 573 e-163
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 62 1e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 59 9e-09
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 59 1e-08
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 58 3e-08
gi|58530845 zyxin [Homo sapiens] 57 5e-08
gi|4508047 zyxin [Homo sapiens] 57 5e-08
gi|40353727 synaptopodin isoform A [Homo sapiens] 56 1e-07
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 56 1e-07
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 55 2e-07
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 55 2e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 54 4e-07
gi|150378539 piccolo isoform 1 [Homo sapiens] 54 4e-07
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 54 4e-07
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 53 7e-07
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 53 7e-07
gi|119943102 CREB binding protein isoform b [Homo sapiens] 53 9e-07
gi|119943104 CREB binding protein isoform a [Homo sapiens] 53 9e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 52 1e-06
gi|50428940 mediator complex subunit 25 [Homo sapiens] 52 1e-06
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 52 2e-06
gi|41281612 zinc finger protein 828 [Homo sapiens] 52 2e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 3e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 51 3e-06
>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
Length = 580
Score = 1164 bits (3011), Expect = 0.0
Identities = 580/580 (100%), Positives = 580/580 (100%)
Query: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF 60
MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF
Sbjct: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF 60
Query: 61 SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR 120
SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR
Sbjct: 61 SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR 120
Query: 121 VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFKPDFILVRQHAYSMALGEDYRSL 180
VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFKPDFILVRQHAYSMALGEDYRSL
Sbjct: 121 VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFKPDFILVRQHAYSMALGEDYRSL 180
Query: 181 VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA
Sbjct: 181 VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
Query: 241 PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS 300
PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS
Sbjct: 241 PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS 300
Query: 301 NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 360
NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR
Sbjct: 301 NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 360
Query: 361 DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP 420
DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP
Sbjct: 361 DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP 420
Query: 421 GQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQR 480
GQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQR
Sbjct: 421 GQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQR 480
Query: 481 SPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQ 540
SPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQ
Sbjct: 481 SPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQ 540
Query: 541 SLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKSFASLFSD 580
SLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKSFASLFSD
Sbjct: 541 SLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKSFASLFSD 580
>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
Length = 579
Score = 1158 bits (2995), Expect = 0.0
Identities = 579/580 (99%), Positives = 579/580 (99%), Gaps = 1/580 (0%)
Query: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF 60
MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF
Sbjct: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF 60
Query: 61 SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR 120
SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR
Sbjct: 61 SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR 120
Query: 121 VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFKPDFILVRQHAYSMALGEDYRSL 180
VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVV RSFKPDFILVRQHAYSMALGEDYRSL
Sbjct: 121 VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVV-RSFKPDFILVRQHAYSMALGEDYRSL 179
Query: 181 VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA
Sbjct: 180 VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 239
Query: 241 PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS 300
PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS
Sbjct: 240 PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS 299
Query: 301 NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 360
NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR
Sbjct: 300 NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 359
Query: 361 DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP 420
DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP
Sbjct: 360 DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP 419
Query: 421 GQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQR 480
GQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQR
Sbjct: 420 GQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQR 479
Query: 481 SPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQ 540
SPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQ
Sbjct: 480 SPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQ 539
Query: 541 SLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKSFASLFSD 580
SLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKSFASLFSD
Sbjct: 540 SLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKSFASLFSD 579
>gi|209413754 synapsin III isoform IIIc [Homo sapiens]
Length = 444
Score = 886 bits (2290), Expect = 0.0
Identities = 439/439 (100%), Positives = 439/439 (100%)
Query: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF 60
MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF
Sbjct: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPDSSTSSPASPAMERRHPQPLAASFSSPGSSLF 60
Query: 61 SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR 120
SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR
Sbjct: 61 SSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVIDDAHTDWSKYFHGKKVNGEIEIR 120
Query: 121 VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFKPDFILVRQHAYSMALGEDYRSL 180
VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFKPDFILVRQHAYSMALGEDYRSL
Sbjct: 121 VEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFKPDFILVRQHAYSMALGEDYRSL 180
Query: 181 VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA
Sbjct: 181 VIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSLGPEKFPLVEQTFFPNHKPMVTA 240
Query: 241 PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS 300
PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS
Sbjct: 241 PHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAKTYATTEAFIDSKYDIRIQKIGS 300
Query: 301 NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 360
NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR
Sbjct: 301 NYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGR 360
Query: 361 DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP 420
DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP
Sbjct: 361 DYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSP 420
Query: 421 GQAQLGPQLGQPQPRPPPQ 439
GQAQLGPQLGQPQPRPPPQ
Sbjct: 421 GQAQLGPQLGQPQPRPPPQ 439
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 652 bits (1682), Expect = 0.0
Identities = 350/605 (57%), Positives = 429/605 (70%), Gaps = 49/605 (8%)
Query: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPD---------------SSTSSP--ASPAMERR 43
MNFLRRRLSDSSF+ANLPNGYMTDLQRP+ S++++P ASP ERR
Sbjct: 2 MNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERR 61
Query: 44 HPQ-----PLAASFSSPGSSLFSSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVID 98
P P A S GSS FSSLS A+KQ A++GL++ P P+ ++ ++LLV+D
Sbjct: 62 PPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTA-ASAGLVDAPAPAPAAARKAKVLLVVD 120
Query: 99 DAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFK 158
+ H DW+K F GKKV G+ +I+VEQAEFSELNL A+ G VDMQV+RNGTKVV RSF+
Sbjct: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV-RSFR 179
Query: 159 PDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSL 218
PDF+L+RQHA+ MA ED+R L+IG+QY GLP++NSL S+YNFC KPWVF+QL+ I+ +L
Sbjct: 180 PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTL 239
Query: 219 GPEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAK 278
G EKFPL+EQT++PNHK M+T P FPVVVK+GHAH+GMGK+KVEN DFQDI SVVA+ +
Sbjct: 240 GGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQ 299
Query: 279 TYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDS 338
TYAT E FIDSKYDIR+QKIG+NYKAYMRTSISGNWK NTGSAMLEQ+AM++RY+LWVD+
Sbjct: 300 TYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDT 359
Query: 339 CSEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQL-- 396
CSEMFGGLDICAVKAVH KDG+DYI EVMD SMPLIGEH EDRQL+ +LV+SKM+QL
Sbjct: 360 CSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLS 419
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSP 456
P + PL PQ + K P ++ PQ RPPPQGGP Q Q QP P
Sbjct: 420 RTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQ------RPPPQGGPGQPQGMQPPGKVLP 473
Query: 457 SQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQG 516
+RL P P S S S +P P + G +P+ +S ++ +PP+
Sbjct: 474 -PRRLPPGPSLPPSSSSSSSSSSSAPQRPG-GPTTHGDAPSSSSS-----LAEAQPPLAA 526
Query: 517 RSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTS-QRGTPSEDEAKAETIRNLRKSFA 575
Q PHP LNKSQSLTN+ S S++S R + +EDEAKAETIR+LRKSFA
Sbjct: 527 PPQKPQ---------PHPQLNKSQSLTNAFSFSESSFFRSSANEDEAKAETIRSLRKSFA 577
Query: 576 SLFSD 580
SLFSD
Sbjct: 578 SLFSD 582
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 611 bits (1576), Expect = e-175
Identities = 358/707 (50%), Positives = 444/707 (62%), Gaps = 129/707 (18%)
Query: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPD-----------SSTSSPASPAMERRHPQPLA 49
MN+LRRRLSDS+FMANLPNGYMTDLQRP +T P + ER A
Sbjct: 1 MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPA 60
Query: 50 ASFSSP------GSSLFSSLSSAMKQAPQATSGLM-EPPGPSTPIVQR----PRILLVID 98
AS ++P G FSSLS+A+KQ A + E G + R R+LLVID
Sbjct: 61 ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRVLLVID 120
Query: 99 DAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFK 158
+ HTDW+KYF GKK++GEI+I+VEQAEFS+LNL A+ GG VDM+V+RNG KVV RS K
Sbjct: 121 EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVV-RSLK 179
Query: 159 PDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSL 218
PDF+L+RQHA+SMA DYRSLVIGLQY G+P+VNSL+SVYNFC KPWVF+Q++++ L
Sbjct: 180 PDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKL 239
Query: 219 GPEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAK 278
G E+FPL++QTF+PNHK M+++ +PVVVK+GHAH+GMGK+KV+NQ DFQDI SVVA+ K
Sbjct: 240 GTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTK 299
Query: 279 TYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDS 338
TYAT E FID+KYD+R+QKIG NYKAYMRTS+SGNWK NTGSAMLEQ+AM++RY+LWVD+
Sbjct: 300 TYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDT 359
Query: 339 CSEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQ-LP 397
CSE+FGGLDICAV+A+H KDGRD+IIEV+ SSMPLIG+H +ED+QL+ +LVV+KM+Q LP
Sbjct: 360 CSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALP 419
Query: 398 M-------PG----GTAPSP-LRPWAPQIKS--AKSPGQAQLGPQLGQPQP--------- 434
PG G PSP P Q A P Q + PQ G PQP
Sbjct: 420 RQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGP 479
Query: 435 ----RPPPQG-------GPRQAQSPQPQRSGSPSQQRLSP----------QGQQ------ 467
RPPPQG GP A SP PQR SP+ P QG+Q
Sbjct: 480 PLQQRPPPQGQQHLSGLGP-PAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAG 538
Query: 468 -----PLSPQSGSPQQQRSPGSPQLSRASSGSSP-------------------------- 496
P + SP QR G PQ +R +S S P
Sbjct: 539 GPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPA 598
Query: 497 ---NQASKPGAT------LASQPRPPVQGRSTSQQGEESKKPA-------------PPHP 534
QAS+ G QPRP G + + + ++KP+ PPHP
Sbjct: 599 GPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHP 658
Query: 535 HLNKSQSLTNSLSTSDTSQ-RGTPSEDEAKAETIRNLRKSFASLFSD 580
LNKSQSLTN+ + + + R + S+DE KAETIR+LRKSFASLFSD
Sbjct: 659 QLNKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD 705
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 595 bits (1533), Expect = e-170
Identities = 337/629 (53%), Positives = 412/629 (65%), Gaps = 76/629 (12%)
Query: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPD-----------SSTSSPASPAMERRHPQPLA 49
MN+LRRRLSDS+FMANLPNGYMTDLQRP +T P + ER A
Sbjct: 1 MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPGAHSPGATPGPGTATAERSSGVAPA 60
Query: 50 ASFSSP------GSSLFSSLSSAMKQAPQATSGLM-EPPGPSTPIVQR----PRILLVID 98
AS ++P G FSSLS+A+KQ A + E G + R R+LLVID
Sbjct: 61 ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAASRVLLVID 120
Query: 99 DAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFK 158
+ HTDW+KYF GKK++GEI+I+VEQAEFS+LNL A+ GG VDM+V+RNG KVV RS K
Sbjct: 121 EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVV-RSLK 179
Query: 159 PDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSL 218
PDF+L+RQHA+SMA DYRSLVIGLQY G+P+VNSL+SVYNFC KPWVF+Q++++ L
Sbjct: 180 PDFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKL 239
Query: 219 GPEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAK 278
G E+FPL++QTF+PNHK M+++ +PVVVK+GHAH+GMGK+KV+NQ DFQDI SVVA+ K
Sbjct: 240 GTEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTK 299
Query: 279 TYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDS 338
TYAT E FID+KYD+R+QKIG NYKAYMRTS+SGNWK NTGSAMLEQ+AM++RY+LWVD+
Sbjct: 300 TYATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDT 359
Query: 339 CSEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQ-LP 397
CSE+FGGLDICAV+A+H KDGRD+IIEV+ SSMPLIG+H +ED+QL+ +LVV+KM+Q LP
Sbjct: 360 CSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALP 419
Query: 398 MPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ------PQPRPPPQGGPRQAQSPQPQ 451
SP R Q SPG LG Q Q Q RPPPQGGP Q P PQ
Sbjct: 420 RQRQRDASPGRGSHGQ---TPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQ-PGPGPQ 475
Query: 452 RSGSPSQQRLSPQGQQPLS---PQSGSPQQQR--SPGSPQLSRASSGSSPNQ-------- 498
R G P QQR PQGQQ LS P +GSP QR SP S AS + P Q
Sbjct: 476 RQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRP 535
Query: 499 -ASKPGATLASQP----------RPPVQGRSTS------------------QQGEESKKP 529
A PGA A++P PP R TS +QG K P
Sbjct: 536 VAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPP 595
Query: 530 APPHPHLNKSQSLTNSLSTSDTSQRGTPS 558
P P SQ+ + T+Q+ PS
Sbjct: 596 GPAGPTRQASQAGPVPRTGPPTTQQPRPS 624
Score = 34.3 bits (77), Expect = 0.32
Identities = 28/90 (31%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Query: 399 PGGTAPS--PLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSP 456
PGG P +P P + QA P+ G P + P GP A P+PQ + P
Sbjct: 582 PGGQQRQGPPQKPPGPA-GPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKP 640
Query: 457 SQQRLSPQGQQPLSPQSGSPQQQRSPGSPQ 486
SQ P P PQ + SP Q
Sbjct: 641 SQDVPPPATAAAGGPP--HPQLKASPAQAQ 668
Score = 32.7 bits (73), Expect = 0.94
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 6/102 (5%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSP 456
P P + +P Q K PG A GP Q P P+ GP Q P+P SG
Sbjct: 572 PAPPKASGAPPGGQQRQGPPQKPPGPA--GPTRQASQAGPVPRTGPPTTQQPRP--SGPG 627
Query: 457 SQQRLSPQGQQPLSPQSGSPQQQRS--PGSPQLSRASSGSSP 496
R PQ Q S P + P PQL + + + P
Sbjct: 628 PAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQP 669
>gi|19924101 synapsin II isoform IIb [Homo sapiens]
Length = 478
Score = 573 bits (1478), Expect = e-163
Identities = 295/484 (60%), Positives = 360/484 (74%), Gaps = 45/484 (9%)
Query: 1 MNFLRRRLSDSSFMANLPNGYMTDLQRPD---------------SSTSSP--ASPAMERR 43
MNFLRRRLSDSSF+ANLPNGYMTDLQRP+ S++++P ASP ERR
Sbjct: 2 MNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPERR 61
Query: 44 HPQ-----PLAASFSSPGSSLFSSLSSAMKQAPQATSGLMEPPGPSTPIVQRPRILLVID 98
P P A S GSS FSSLS A+KQ A++GL++ P P+ ++ ++LLV+D
Sbjct: 62 PPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTA-ASAGLVDAPAPAPAAARKAKVLLVVD 120
Query: 99 DAHTDWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSFK 158
+ H DW+K F GKKV G+ +I+VEQAEFSELNL A+ G VDMQV+RNGTKVV RSF+
Sbjct: 121 EPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAVDMQVLRNGTKVV-RSFR 179
Query: 159 PDFILVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHSL 218
PDF+L+RQHA+ MA ED+R L+IG+QY GLP++NSL S+YNFC KPWVF+QL+ I+ +L
Sbjct: 180 PDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTL 239
Query: 219 GPEKFPLVEQTFFPNHKPMVTAPHFPVVVKLGHAHAGMGKIKVENQLDFQDITSVVAMAK 278
G EKFPL+EQT++PNHK M+T P FPVVVK+GHAH+GMGK+KVEN DFQDI SVVA+ +
Sbjct: 240 GGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQ 299
Query: 279 TYATTEAFIDSKYDIRIQKIGSNYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDS 338
TYAT E FIDSKYDIR+QKIG+NYKAYMRTSISGNWK NTGSAMLEQ+AM++RY+LWVD+
Sbjct: 300 TYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDT 359
Query: 339 CSEMFGGLDICAVKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQL-- 396
CSEMFGGLDICAVKAVH KDG+DYI EVMD SMPLIGEH EDRQL+ +LV+SKM+QL
Sbjct: 360 CSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLS 419
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQG-------------GPR 443
P + PL PQ + K P ++ PQ RPPPQG GP+
Sbjct: 420 RTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQ------RPPPQGCLQYILDCNGIAVGPK 473
Query: 444 QAQS 447
Q Q+
Sbjct: 474 QVQA 477
Score = 33.9 bits (76), Expect = 0.42
Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 427 PQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQ 486
P+ QP P PPP G A + P + SP +R P P S + P S GS
Sbjct: 29 PEPQQPPPPPPPGPGAASASAAPP--TASPGPERRPP----PASAPAPQPAPTPSVGSSF 82
Query: 487 LSRASSGSSPNQASKPGATLASQPRP 512
S S AS A L P P
Sbjct: 83 FSSLSQAVKQTAAS---AGLVDAPAP 105
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 381 DRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKS-PGQAQLGPQLGQPQPRPPPQ 439
D +A+L M+ L P P P P P SA + P A GP+ RPPP
Sbjct: 11 DSSFIANLPNGYMTDLQRPEPQQPPPPPPPGPGAASASAAPPTASPGPER-----RPPP- 64
Query: 440 GGPRQAQSPQPQRSGSPS 457
A +P PQ + +PS
Sbjct: 65 -----ASAPAPQPAPTPS 77
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 62.4 bits (150), Expect = 1e-09
Identities = 56/175 (32%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLG--PQLGQPQPRPPPQGGPRQAQSP 448
S+ S P P A +PL+ P S P QA LG P L P P PP P + QS
Sbjct: 752 SQASPAPAPQIPAAAPLKGPGPS-SSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSV 810
Query: 449 QPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSS-PNQASKPGATLA 507
P + PL P P Q P P + + P AS P T
Sbjct: 811 S------------RPPSEPPLHP---CPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAP 855
Query: 508 SQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQR---GTPSE 559
P+PP++ +S +G P PP PHL S + + S+S+TS R TPS+
Sbjct: 856 GPPQPPLRPQSQPPEG-----PLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSD 905
Score = 47.4 bits (111), Expect = 4e-05
Identities = 48/179 (26%), Positives = 65/179 (36%), Gaps = 25/179 (13%)
Query: 369 SSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQ 428
++ PL G L + LP P T P P PQ S + P + L P
Sbjct: 764 AAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVS-RPPSEPPLHPC 822
Query: 429 LGQPQPRPPPQ-----------GGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQ 477
P P+ PP G P A +P P G P Q PL PQS P+
Sbjct: 823 ---PPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPP---------QPPLRPQSQPPE 870
Query: 478 QQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHL 536
P +P L +S+ S+ +S+ + L + Q + QG PP HL
Sbjct: 871 GPLPP-APHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHL 928
Score = 36.2 bits (82), Expect = 0.085
Identities = 45/161 (27%), Positives = 59/161 (36%), Gaps = 24/161 (14%)
Query: 409 PWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGG-PRQAQSPQPQRSGSPSQQR------- 460
P AP S P Q PQ QP P PQ P QA +PQP + S ++
Sbjct: 625 PQAPPAVSTPLPLGLQQ-PQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPP 683
Query: 461 -------LSPQGQQPLSPQSGSPQQQRSPGSPQLSRASS--GSSPNQASKPGATLASQPR 511
L+ Q PQ S QQ S P LS +S S+P A P +
Sbjct: 684 SATPTAILTQDSLQMFLPQERS-QQPLSAEGPHLSVPASVIVSAPPPAQDP-----APAT 737
Query: 512 PPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTS 552
P +G Q +S+ P P + + L +S S
Sbjct: 738 PVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPS 778
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 59.3 bits (142), Expect = 9e-09
Identities = 49/144 (34%), Positives = 60/144 (41%), Gaps = 23/144 (15%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGG--PRQAQSPQPQRSGSP 456
P G P P +P P + P Q P G+PQ PPPQGG R ++SP + G P
Sbjct: 253 PQGPPPPPGKPQGPPPQGGNKP---QGPPPPGKPQG-PPPQGGSKSRSSRSPPGKPQGPP 308
Query: 457 SQQRLSPQGQQP-------LSPQSGS-PQQQRSPGSPQLSRASSGSSPNQASKPGATLAS 508
Q PQG P PQ G+ PQ PG PQ GS A P
Sbjct: 309 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSP----PG 364
Query: 509 QPRPPVQGRSTSQQGEESKKPAPP 532
+P+ P Q Q+G + P PP
Sbjct: 365 KPQGPPQ-----QEGNNPQGPPPP 383
Score = 57.4 bits (137), Expect = 4e-08
Identities = 55/171 (32%), Positives = 66/171 (38%), Gaps = 30/171 (17%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSP-GQAQLGPQLGQPQPR-----------PPPQGG- 441
Q P P G P + +SA+SP G+ Q P G QP+ PPPQGG
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 272
Query: 442 -------PRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQ---RSPGSPQLSRAS 491
P + Q P PQ GS S+ SP G+ P G Q Q PG PQ
Sbjct: 273 KPQGPPPPGKPQGPPPQ-GGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 331
Query: 492 SGSSPNQASKPGATLASQPRPPVQG--RSTSQQGEESKKPAPPHPHLNKSQ 540
G+ P PG PP QG +S S + K PP N Q
Sbjct: 332 GGNKPQGPPPPG----KPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQ 378
Score = 56.2 bits (134), Expect = 8e-08
Identities = 55/182 (30%), Positives = 70/182 (38%), Gaps = 24/182 (13%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGG--PRQAQSPQPQRSGSP 456
P G P P +P P + P Q P G+PQ PPPQG + A+SP + G P
Sbjct: 191 PQGPPPPPGKPQGPPPQGGNKP---QGPPPPGKPQG-PPPQGDNKSQSARSPPGKPQGPP 246
Query: 457 SQQRLSPQGQQP-------LSPQSGS-PQQQRSPGSPQ-------LSRASSGSSPNQASK 501
Q PQG P PQ G+ PQ PG PQ SS S P +
Sbjct: 247 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQG 306
Query: 502 PGATLASQPR--PPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSE 559
P +QP+ PP G+ + KP P P K Q + S R P +
Sbjct: 307 PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP-GKPQGPPPQGGSKSRSARSPPGK 365
Query: 560 DE 561
+
Sbjct: 366 PQ 367
Score = 55.1 bits (131), Expect = 2e-07
Identities = 53/170 (31%), Positives = 63/170 (37%), Gaps = 30/170 (17%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPP-------PQGGPRQAQSPQPQ 451
P G P P +P P + P Q P G+PQ PP P+ P + Q P PQ
Sbjct: 68 PQGPPPPPGKPQGPPPQGGNKP---QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQ 124
Query: 452 RSGSPSQQRLSPQGQQPLSPQSGS-PQQQRSPGSPQ-------LSRASSGSSPNQASKPG 503
P P Q PQ G+ PQ PG PQ SS S P + P
Sbjct: 125 GGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPP 184
Query: 504 ATLASQPR-----------PPVQGRSTSQQGEESKKP-APPHPHLNKSQS 541
+QP+ PP QG + Q KP PP NKSQS
Sbjct: 185 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQS 234
Score = 54.3 bits (129), Expect = 3e-07
Identities = 52/183 (28%), Positives = 65/183 (35%), Gaps = 15/183 (8%)
Query: 369 SSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPS--PLRPWAPQIKSAKSPGQAQ-L 425
SS + E V ++ L+ P GG P P P PQ + Q Q
Sbjct: 14 SSAQNLNEDVSQEES--PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGP 71
Query: 426 GPQLGQPQPRPP-----PQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQ- 479
P G+PQ PP PQG P + P G S+ SP G+ P G Q Q
Sbjct: 72 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG 131
Query: 480 --RSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLN 537
PG PQ G+ P PG P P +S S + K PP N
Sbjct: 132 PPPPPGKPQGPPPQGGNKPQGPPPPGK--PQGPPPQGDNKSRSSRSPPGKPQGPPPQGGN 189
Query: 538 KSQ 540
+ Q
Sbjct: 190 QPQ 192
Score = 53.5 bits (127), Expect = 5e-07
Identities = 53/171 (30%), Positives = 66/171 (38%), Gaps = 30/171 (17%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSP-GQAQLGPQLGQPQPR-----------PPPQGG- 441
Q P P G P + +S++SP G+ Q P G QP+ PPPQGG
Sbjct: 151 QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 210
Query: 442 -------PRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQ---RSPGSPQLSRAS 491
P + Q P PQ + SQ SP G+ P G Q Q PG PQ
Sbjct: 211 KPQGPPPPGKPQGPPPQ-GDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 269
Query: 492 SGSSPNQASKPGATLASQPRPPVQG--RSTSQQGEESKKPAPPHPHLNKSQ 540
G+ P PG PP QG +S S + K PP N+ Q
Sbjct: 270 GGNKPQGPPPPG----KPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQ 316
Score = 52.8 bits (125), Expect = 9e-07
Identities = 50/144 (34%), Positives = 64/144 (44%), Gaps = 29/144 (20%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSP-GQAQLGPQLGQPQPR-----------PPPQGG- 441
Q P P G P + +S++SP G+ Q P G QP+ PPPQGG
Sbjct: 275 QGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 334
Query: 442 -------PRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGS 494
P + Q P PQ GS S+ SP G+ PQ G PQQ+ + +PQ +G
Sbjct: 335 KPQGPPPPGKPQGPPPQ-GGSKSRSARSPPGK----PQ-GPPQQEGN--NPQGPPPPAGG 386
Query: 495 SPNQASKPGA-TLASQPRPPVQGR 517
+P Q P A PRPP GR
Sbjct: 387 NPQQPQAPPAGQPQGPPRPPQGGR 410
Score = 42.0 bits (97), Expect = 0.002
Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSP-GQAQLGPQL--GQPQPRPPPQGGPRQAQSPQPQ 451
Q P P G P + +SA+SP G+ Q PQ PQ PPP GG Q PQ
Sbjct: 337 QGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGG--NPQQPQAP 394
Query: 452 RSGSPSQQRLSPQGQQPLSP 471
+G P PQG +P P
Sbjct: 395 PAGQPQGPPRPPQGGRPSRP 414
Score = 34.3 bits (77), Expect = 0.32
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 455 SPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPV 514
SPS +PQG +P G + Q P P + NQ P PP
Sbjct: 28 SPSLIAGNPQG----APPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 83
Query: 515 QGRSTSQQGEESKKPAPPHPHLNKSQS 541
QG + Q KP P P +KS+S
Sbjct: 84 QGGNKPQGPPPPGKPQGPPPQGDKSRS 110
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 58.9 bits (141), Expect = 1e-08
Identities = 55/177 (31%), Positives = 66/177 (37%), Gaps = 22/177 (12%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGG-PRQAQSPQPQRSGSPS 457
P G P P +P P + P Q P G+PQ PPPQG R +SP + G P
Sbjct: 47 PQGPPPPPGKPQGPPPQGGNKP---QGPPPPGKPQ-GPPPQGDKSRSPRSPPGKPQGPPP 102
Query: 458 QQRLSPQGQQP-------LSPQSGS-PQQQRSPGSPQLSRASSGSSPNQASKPGATLASQ 509
Q PQG P PQ G+ PQ PG PQ S + S PG
Sbjct: 103 QGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP 162
Query: 510 PR--------PPVQGRSTSQQGEESKKP-APPHPHLNKSQSLTNSLSTSDTSQRGTP 557
P+ PP G+ + KKP PP P + S S S G P
Sbjct: 163 PQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKP 219
Score = 56.2 bits (134), Expect = 8e-08
Identities = 49/144 (34%), Positives = 59/144 (40%), Gaps = 24/144 (16%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGG--PRQAQSPQPQRSGSP 456
P G P P +P P + K P Q P G+PQ PP G R +QSP + G P
Sbjct: 169 PQGPPPPPGKPQGPPPQGGKKP---QGPPPPGKPQG--PPPQGDKSRSSQSPPGKPQGPP 223
Query: 457 SQQRLSPQGQQP-------LSPQSGS-PQQQRSPGSPQLSRASSGSSPNQASKPGATLAS 508
Q PQG P PQ G+ PQ PG PQ A GS A P
Sbjct: 224 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP----PG 279
Query: 509 QPRPPVQGRSTSQQGEESKKPAPP 532
+P+ P Q Q+G + P PP
Sbjct: 280 KPQGPPQ-----QEGNNPQGPPPP 298
Score = 53.1 bits (126), Expect = 7e-07
Identities = 52/147 (35%), Positives = 66/147 (44%), Gaps = 30/147 (20%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQIKSAKSP-GQAQLGPQLGQPQPR-----------PPPQ 439
K Q P P G P P + +S++SP G+ Q P G QP+ PPPQ
Sbjct: 188 KKPQGPPPPGKPQGP-PPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQ 246
Query: 440 GG--------PRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRAS 491
GG P + Q P P + GS SQ SP G+ PQ G PQQ+ + +PQ
Sbjct: 247 GGNKPQGPPPPGKPQGP-PAQGGSKSQSARSPPGK----PQ-GPPQQEGN--NPQGPPPP 298
Query: 492 SGSSPNQASKPGA-TLASQPRPPVQGR 517
+G +P Q P A PRPP GR
Sbjct: 299 AGGNPQQPQAPPAGQPQGPPRPPQGGR 325
Score = 52.8 bits (125), Expect = 9e-07
Identities = 51/155 (32%), Positives = 59/155 (38%), Gaps = 20/155 (12%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSG 454
Q P P G P PQ ++SP PQ PQ PQG P PQ G
Sbjct: 69 QGPPPPGKPQGP----PPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ----G 120
Query: 455 SPSQQRLSPQGQQPL-SPQSGSPQQQRS------PGSPQLSRASSGSSPNQASKPGATLA 507
P Q PQG P PQ PQ +S PG PQ G+ P P
Sbjct: 121 PPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPP----P 176
Query: 508 SQPR-PPVQGRSTSQQGEESKKPAPPHPHLNKSQS 541
+P+ PP QG Q KP P P +KS+S
Sbjct: 177 GKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRS 211
Score = 52.8 bits (125), Expect = 9e-07
Identities = 53/176 (30%), Positives = 60/176 (34%), Gaps = 36/176 (20%)
Query: 397 PMPGGTAPS----PLRPWAPQIKSAKS------PGQAQLGPQLG--QPQPRPP------- 437
P GG P P +P P + KS PG+ Q P G QPQ PP
Sbjct: 122 PPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 181
Query: 438 --------PQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQ---RSPGSPQ 486
PQG P + P G S+ SP G+ P G Q Q PG PQ
Sbjct: 182 PPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 241
Query: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEE--SKKPAPPHPHLNKSQ 540
G+ P PG PP QG S SQ K PP N Q
Sbjct: 242 GPPPQGGNKPQGPPPPG----KPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQ 293
Score = 52.0 bits (123), Expect = 1e-06
Identities = 52/174 (29%), Positives = 60/174 (34%), Gaps = 33/174 (18%)
Query: 397 PMPGGTAPS----PLRPWAPQIKSAKS------PGQAQLGPQLG--QPQPRPP------- 437
P GG P P +P P + KS PG+ Q P G QPQ PP
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 120
Query: 438 --------PQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQ---RSPGSPQ 486
PQG P + P G S+ SP G+ P G Q Q PG PQ
Sbjct: 121 PPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 180
Query: 487 LSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQ 540
G P PG Q PP +S S Q K PP N+ Q
Sbjct: 181 GPPPQGGKKPQGPPPPG---KPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQ 231
Score = 50.1 bits (118), Expect = 6e-06
Identities = 44/136 (32%), Positives = 53/136 (38%), Gaps = 16/136 (11%)
Query: 414 IKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPL-SPQ 472
+ +SP PQ PQ PQG P PQ G P Q PQG P PQ
Sbjct: 23 VSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQ----GPPPQGGNKPQGPPPPGKPQ 78
Query: 473 SGSPQQQRS------PGSPQLSRASSGSSPNQASKPGATLASQPR-PPVQGRSTSQQGEE 525
PQ +S PG PQ G+ P P +P+ PP QG + Q
Sbjct: 79 GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPP----PGKPQGPPPQGGNRPQGPPP 134
Query: 526 SKKPAPPHPHLNKSQS 541
KP P P +KS+S
Sbjct: 135 PGKPQGPPPQGDKSRS 150
Score = 42.0 bits (97), Expect = 0.002
Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSP-GQAQLGPQL--GQPQPRPPPQGGPRQAQSPQPQ 451
Q P P G P + +SA+SP G+ Q PQ PQ PPP GG Q PQ
Sbjct: 252 QGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG--NPQQPQAP 309
Query: 452 RSGSPSQQRLSPQGQQPLSP 471
+G P PQG +P P
Sbjct: 310 PAGQPQGPPRPPQGGRPSRP 329
Score = 29.6 bits (65), Expect = 8.0
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 391 SKMSQLPMPGGTAPSPLR-----PWAPQIKSAKSPGQAQLGPQLGQPQ-PRPPPQGGPRQ 444
SK P G P + P P + +P Q Q P GQPQ P PPQGG R
Sbjct: 269 SKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQ-APPAGQPQGPPRPPQGG-RP 326
Query: 445 AQSPQ 449
++ PQ
Sbjct: 327 SRPPQ 331
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 57.8 bits (138), Expect = 3e-08
Identities = 44/140 (31%), Positives = 59/140 (42%), Gaps = 16/140 (11%)
Query: 401 GTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQ--------- 451
GT P P +P P + + P G+P+ RPPPQGG Q+Q P P
Sbjct: 112 GTPPPPGKPERPPPQGGNQSHRPP--PPPGKPE-RPPPQGG-NQSQGPPPHPGKPEGPPP 167
Query: 452 RSGSPSQQRLSPQG--QQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQ 509
+ G+ S+ SP G Q P + PQ PG PQ +G +P Q P A
Sbjct: 168 QEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQ-GPPPAGGNPQQPQAPPAGKPQG 226
Query: 510 PRPPVQGRSTSQQGEESKKP 529
P PP QG + + + P
Sbjct: 227 PPPPPQGGRPPRPAQGQQPP 246
Score = 53.1 bits (126), Expect = 7e-07
Identities = 51/184 (27%), Positives = 64/184 (34%), Gaps = 14/184 (7%)
Query: 369 SSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPS--PLRPWAPQIKSAKSPGQAQ-L 425
SS E V ++ L L+ K GG P P P PQ + Q+Q
Sbjct: 14 SSAESSSEDVSQEESLF--LISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGP 71
Query: 426 GPQLGQPQPRPPPQGGPRQAQSPQPQR-------SGSPSQQRLSPQGQQPLSPQSGSPQQ 478
P G+P+ RPP G Q P P + G+ SQ P G+ P G Q
Sbjct: 72 PPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQS 131
Query: 479 QRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQ--GRSTSQQGEESKKPAPPHPHL 536
R P P NQ+ P PP Q +S S + K PP
Sbjct: 132 HRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEG 191
Query: 537 NKSQ 540
NK Q
Sbjct: 192 NKPQ 195
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/126 (34%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Query: 427 PQLGQPQPRPPPQGGPRQAQSPQP---QRSGSPSQQRLSPQGQQP------LSPQSGSPQ 477
P G+PQ PPPQGG Q+Q P P + G P Q QG P P G Q
Sbjct: 52 PPPGKPQG-PPPQGG-NQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQ 109
Query: 478 QQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQ--QGEESKKPAPPHPH 535
Q +P P NQ+ +P RPP QG + SQ K PP
Sbjct: 110 SQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQE 169
Query: 536 LNKSQS 541
NKS+S
Sbjct: 170 GNKSRS 175
Score = 50.8 bits (120), Expect = 3e-06
Identities = 47/156 (30%), Positives = 60/156 (38%), Gaps = 26/156 (16%)
Query: 397 PMPGGTAPS--PLRPWAPQIKSAKSPGQAQ-LGPQLGQPQPRPPPQGGPRQAQSPQPQRS 453
P GG P P P+ + Q+Q P G+P+ RPPPQGG + + P P
Sbjct: 82 PPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPE-RPPPQGGNQSHRPPPP--P 138
Query: 454 GSPSQQRLSPQG--------QQPLSPQSGSPQQ-------QRSPGSPQLSRASSGSSPNQ 498
G P +R PQG P P+ PQ+ + PG PQ G+ P
Sbjct: 139 GKP--ERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQG 196
Query: 499 ASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHP 534
PG Q PP G Q + KP P P
Sbjct: 197 PPPPG---KPQGPPPAGGNPQQPQAPPAGKPQGPPP 229
Score = 47.8 bits (112), Expect = 3e-05
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 27/154 (17%)
Query: 395 QLPMPGGTAPS---PLRPWAPQIKSAKSPGQAQ-LGPQLGQPQPRPPPQGG--------- 441
Q P P G S P P P+ + + Q+Q P G+P+ RPPPQGG
Sbjct: 58 QGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPE-RPPPQGGNQSQGTPPP 116
Query: 442 PRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQ---RSPGSPQLSRASSGSSPNQ 498
P + + P PQ G+ S + P G+ P G Q Q PG P+ G+
Sbjct: 117 PGKPERPPPQ-GGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRS 175
Query: 499 ASKPGATLASQPRPPVQGRSTSQQGEESKKPAPP 532
A P +P+ P Q Q+G + + P PP
Sbjct: 176 ARSP----PGKPQGPPQ-----QEGNKPQGPPPP 200
Score = 40.0 bits (92), Expect = 0.006
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 21/97 (21%)
Query: 401 GTAPSPLRPWAP------QIKSAKSP-GQAQLGPQL-----------GQPQPRPPPQGGP 442
G P P +P P + +SA+SP G+ Q PQ G+PQ PP G P
Sbjct: 154 GPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNP 213
Query: 443 RQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQ 479
+Q Q+P +G P PQG +P P G Q
Sbjct: 214 QQPQAP---PAGKPQGPPPPPQGGRPPRPAQGQQPPQ 247
Score = 34.3 bits (77), Expect = 0.32
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 15/55 (27%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQ-PRPPPQGG--PRQAQSPQP 450
P G P+ P PQ P G+PQ P PPPQGG PR AQ QP
Sbjct: 203 PQGPPPAGGNPQQPQ------------APPAGKPQGPPPPPQGGRPPRPAQGQQP 245
>gi|58530845 zyxin [Homo sapiens]
Length = 572
Score = 57.0 bits (136), Expect = 5e-08
Identities = 56/173 (32%), Positives = 70/173 (40%), Gaps = 37/173 (21%)
Query: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLG-----------QPQPRPPPQ 439
SK S P GGTAP P PW KSP +Q PQ+ QPQP+P PQ
Sbjct: 183 SKSSTKPAAGGTAPLP--PW-------KSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQ 233
Query: 440 GGPRQAQSPQP------QRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSG 493
QP Q G P+ P++P+ + SPG+P SG
Sbjct: 234 VQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAP----GGSG 289
Query: 494 SSPNQ-ASKPGATLASQPRPPVQGRSTSQQGE-----ESKKPAPPHPHLNKSQ 540
S PNQ P A A P + +QQ E E + P PP P N++Q
Sbjct: 290 SQPNQKLGHPEALSAGTGSPQPPSFTYAQQREKPRVQEKQHPVPP-PAQNQNQ 341
Score = 40.8 bits (94), Expect = 0.003
Identities = 51/203 (25%), Positives = 73/203 (35%), Gaps = 37/203 (18%)
Query: 400 GGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQ-------- 451
GG P P P A P + ++ P P P P +GGP P PQ
Sbjct: 90 GGAFPPPPPPIEESFPPA--PLEEEIFPS---PPPPPEEEGGPEAPIPPPPQPREKVSSI 144
Query: 452 --------------RSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPN 497
P + R+S G P P +P +S P A+ G++P
Sbjct: 145 DLEIDSLSSLLDDMTKNDPFKARVS-SGYVP--PPVATPFSSKSSTKP----AAGGTAPL 197
Query: 498 QASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLN-KSQSLTNSLSTSDTSQRGT 556
K + +SQP P V + SQ + P P + QS T +S ++T RG
Sbjct: 198 PPWK--SPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGP 255
Query: 557 PSEDEAKAETIRNLRKSFASLFS 579
P+ A A + F + S
Sbjct: 256 PASSPAPAPKFSPVTPKFTPVAS 278
Score = 37.0 bits (84), Expect = 0.050
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 15/123 (12%)
Query: 372 PLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAP----SPLRPWAPQIKSAKSPGQ----- 422
P + HV+ Q ++ + + + P AP SP+ P + S SPG
Sbjct: 232 PQVQLHVQSQTQPVS--LANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGSG 289
Query: 423 AQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSP 482
+Q +LG P+ G P+ Q+ P Q + Q P+ P + + Q RSP
Sbjct: 290 SQPNQKLGHPEALSAGTGSPQPPSFTYAQQREKPRVQ----EKQHPVPPPAQNQNQVRSP 345
Query: 483 GSP 485
G+P
Sbjct: 346 GAP 348
>gi|4508047 zyxin [Homo sapiens]
Length = 572
Score = 57.0 bits (136), Expect = 5e-08
Identities = 56/173 (32%), Positives = 70/173 (40%), Gaps = 37/173 (21%)
Query: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLG-----------QPQPRPPPQ 439
SK S P GGTAP P PW KSP +Q PQ+ QPQP+P PQ
Sbjct: 183 SKSSTKPAAGGTAPLP--PW-------KSPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQ 233
Query: 440 GGPRQAQSPQP------QRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSG 493
QP Q G P+ P++P+ + SPG+P SG
Sbjct: 234 VQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAP----GGSG 289
Query: 494 SSPNQ-ASKPGATLASQPRPPVQGRSTSQQGE-----ESKKPAPPHPHLNKSQ 540
S PNQ P A A P + +QQ E E + P PP P N++Q
Sbjct: 290 SQPNQKLGHPEALSAGTGSPQPPSFTYAQQREKPRVQEKQHPVPP-PAQNQNQ 341
Score = 40.8 bits (94), Expect = 0.003
Identities = 51/203 (25%), Positives = 73/203 (35%), Gaps = 37/203 (18%)
Query: 400 GGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQ-------- 451
GG P P P A P + ++ P P P P +GGP P PQ
Sbjct: 90 GGAFPPPPPPIEESFPPA--PLEEEIFPS---PPPPPEEEGGPEAPIPPPPQPREKVSSI 144
Query: 452 --------------RSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPN 497
P + R+S G P P +P +S P A+ G++P
Sbjct: 145 DLEIDSLSSLLDDMTKNDPFKARVS-SGYVP--PPVATPFSSKSSTKP----AAGGTAPL 197
Query: 498 QASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLN-KSQSLTNSLSTSDTSQRGT 556
K + +SQP P V + SQ + P P + QS T +S ++T RG
Sbjct: 198 PPWK--SPSSSQPLPQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGP 255
Query: 557 PSEDEAKAETIRNLRKSFASLFS 579
P+ A A + F + S
Sbjct: 256 PASSPAPAPKFSPVTPKFTPVAS 278
Score = 37.0 bits (84), Expect = 0.050
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 15/123 (12%)
Query: 372 PLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAP----SPLRPWAPQIKSAKSPGQ----- 422
P + HV+ Q ++ + + + P AP SP+ P + S SPG
Sbjct: 232 PQVQLHVQSQTQPVS--LANTQPRGPPASSPAPAPKFSPVTPKFTPVASKFSPGAPGGSG 289
Query: 423 AQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSP 482
+Q +LG P+ G P+ Q+ P Q + Q P+ P + + Q RSP
Sbjct: 290 SQPNQKLGHPEALSAGTGSPQPPSFTYAQQREKPRVQ----EKQHPVPPPAQNQNQVRSP 345
Query: 483 GSP 485
G+P
Sbjct: 346 GAP 348
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 55.8 bits (133), Expect = 1e-07
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 14/163 (8%)
Query: 402 TAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQ------RSGS 455
++P PL P P S + L P+ + RPP RQ Q+ + R S
Sbjct: 717 SSPPPLPPPPPMSPSWSERSVSPLRPET---EARPPS----RQLQALLARNIINAARRKS 769
Query: 456 PSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQ 515
S + + +P SP P P P R+ + P A+ PGA A PR P+
Sbjct: 770 ASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLP 829
Query: 516 GRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPS 558
+S S PAPP P L + +S T+S + D+ G S
Sbjct: 830 AGPSSCTSPRSPLPAPPRPFLYR-RSPTDSDVSLDSEDSGAKS 871
Score = 39.3 bits (90), Expect = 0.010
Identities = 56/212 (26%), Positives = 80/212 (37%), Gaps = 45/212 (21%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQ--------PRPPPQGGPRQAQSP 448
P P P LRP + K P A++ P+ P P P P P
Sbjct: 557 PEPTKQPPYQLRPSLFVLSPIKEP--AKVSPRAASPAKPSSLDLVPNLPKGALPPSPALP 614
Query: 449 QPQRSG-----SPSQQRLSPQGQQP-----LSP----QSGSPQQQRSPGSPQLSRASSG- 493
+P RS SP Q L P P +SP ++ SP+ +++P P S ++G
Sbjct: 615 RPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAP-RPSFSTRNAGI 673
Query: 494 -------SSPNQ------ASKPGATLAS--QPRPPVQGRSTSQQGEESKKPAPPHPHLNK 538
S P AS+P ++L P P GR +S S P PP P ++
Sbjct: 674 EAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSM---SSPPPLPPPPPMSP 730
Query: 539 SQSLTNSLSTSDTSQRGTPSEDEAKAETIRNL 570
S S S+S P + +A RN+
Sbjct: 731 SWS-ERSVSPLRPETEARPPSRQLQALLARNI 761
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 55.8 bits (133), Expect = 1e-07
Identities = 46/137 (33%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Query: 404 PSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSP 463
PSP PQ PG+ Q P G +P+ PP G Q PQ +S SP P
Sbjct: 39 PSPQGGNKPQ-GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKP 97
Query: 464 QGQQPLS-------PQSGS-PQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQ 515
QG P PQ G+ PQ PG PQ A GS A P +P+ P Q
Sbjct: 98 QGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP----PGKPQGPPQ 153
Query: 516 GRSTSQQGEESKKPAPP 532
Q+G + P PP
Sbjct: 154 -----QEGNNPQGPPPP 165
Score = 54.7 bits (130), Expect = 2e-07
Identities = 50/140 (35%), Positives = 61/140 (43%), Gaps = 27/140 (19%)
Query: 397 PMPGGTAPS----PLRPWAPQIKSAKS------PGQAQLGPQLGQPQPRPPPQGG----- 441
P GG P P +P P + KS PG+ Q P G PPPQGG
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQG 120
Query: 442 ---PRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQ 498
P + Q P P + GS SQ SP G+ PQ G PQQ+ + +PQ +G +P Q
Sbjct: 121 PPPPGKPQGP-PAQGGSKSQSARSPPGK----PQ-GPPQQEGN--NPQGPPPPAGGNPQQ 172
Query: 499 ASKPGA-TLASQPRPPVQGR 517
P A PRPP GR
Sbjct: 173 PQAPPAGQPQGPPRPPQGGR 192
Score = 51.6 bits (122), Expect = 2e-06
Identities = 47/155 (30%), Positives = 55/155 (35%), Gaps = 28/155 (18%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSP------GQAQLGPQLGQP--QPRPP---PQGGPRQAQS 447
P G P P +P P + P G+ Q P G PR P PQG P Q
Sbjct: 47 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGK 106
Query: 448 PQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRS--------PGSPQLSRASSGSSPNQA 499
PQ G P Q PQG P G P Q S PG PQ G++P
Sbjct: 107 PQ----GPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGP 162
Query: 500 SKPGATLASQPRPPVQGRSTS-----QQGEESKKP 529
P QP+ P G+ Q G S+ P
Sbjct: 163 PPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 197
Score = 46.6 bits (109), Expect = 6e-05
Identities = 42/157 (26%), Positives = 51/157 (32%), Gaps = 12/157 (7%)
Query: 414 IKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQS 473
+ +SP PQ PQ PQG P PQ G P Q PQG P
Sbjct: 23 VSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQ----GPPPQGGNKPQGPPPPGKPQ 78
Query: 474 GSPQQQRSPGSPQLSRASSGSSPNQASKP------GATLASQPRPPVQGRSTSQQGEESK 527
G P Q SP+ P Q KP G P PP + + QG
Sbjct: 79 GPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKS 138
Query: 528 KPA--PPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEA 562
+ A PP Q N+ G P + +A
Sbjct: 139 QSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 175
Score = 42.0 bits (97), Expect = 0.002
Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSP-GQAQLGPQL--GQPQPRPPPQGGPRQAQSPQPQ 451
Q P P G P + +SA+SP G+ Q PQ PQ PPP GG Q PQ
Sbjct: 119 QGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG--NPQQPQAP 176
Query: 452 RSGSPSQQRLSPQGQQPLSP 471
+G P PQG +P P
Sbjct: 177 PAGQPQGPPRPPQGGRPSRP 196
Score = 29.6 bits (65), Expect = 8.0
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 391 SKMSQLPMPGGTAPSPLR-----PWAPQIKSAKSPGQAQLGPQLGQPQ-PRPPPQGGPRQ 444
SK P G P + P P + +P Q Q P GQPQ P PPQGG R
Sbjct: 136 SKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQ-APPAGQPQGPPRPPQGG-RP 193
Query: 445 AQSPQ 449
++ PQ
Sbjct: 194 SRPPQ 198
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 55.1 bits (131), Expect = 2e-07
Identities = 48/136 (35%), Positives = 58/136 (42%), Gaps = 27/136 (19%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPP--------------PQGGPRQ 444
P G P P +P P + P Q P G+PQ PP PQG P Q
Sbjct: 47 PQGPPPPPGKPQGPPPQGGNKP---QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQ 103
Query: 445 AQSPQ--PQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKP 502
PQ P + GS SQ SP G+ PQ G PQQ+ + +PQ +G +P Q P
Sbjct: 104 GGKPQGPPAQGGSKSQSARSPPGK----PQ-GPPQQEGN--NPQGPPPPAGGNPQQPQAP 156
Query: 503 GA-TLASQPRPPVQGR 517
A PRPP GR
Sbjct: 157 PAGQPQGPPRPPQGGR 172
Score = 52.8 bits (125), Expect = 9e-07
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 397 PMPGGTAPS----PLRPWAPQIKSAKS------PGQAQLGPQLGQPQPRPPPQGGPRQ-- 444
P GG P P +P P + KS PG+ Q P G PP QGG +
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQS 120
Query: 445 AQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSP--GSPQ-LSRASSGSSPNQ 498
A+SP + G P Q+ +PQG P P G+PQQ ++P G PQ R G P++
Sbjct: 121 ARSPPGKPQGPPQQEGNNPQGPPP--PAGGNPQQPQAPPAGQPQGPPRPPQGGRPSR 175
Score = 52.4 bits (124), Expect = 1e-06
Identities = 45/140 (32%), Positives = 56/140 (40%), Gaps = 15/140 (10%)
Query: 404 PSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSP-----SQ 458
PSP PQ PG+ Q P G +P+ PP G Q PQ +S SP
Sbjct: 39 PSPQGGNKPQ-GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKP 97
Query: 459 QRLSPQGQQPLSP--QSGSPQQ--QRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPV 514
Q PQG +P P Q GS Q + PG PQ G++P P QP+ P
Sbjct: 98 QGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP 157
Query: 515 QGRSTS-----QQGEESKKP 529
G+ Q G S+ P
Sbjct: 158 AGQPQGPPRPPQGGRPSRPP 177
Score = 46.6 bits (109), Expect = 6e-05
Identities = 37/110 (33%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 427 PQLG-QPQPRPPPQGGPRQAQSPQPQRSGSPS--QQRLSPQGQQPLSPQSGSPQQQRSPG 483
PQ G +PQ PPP G P Q P PQ P PQG P +S SP+ PG
Sbjct: 41 PQGGNKPQGPPPPPGKP---QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRS--PPG 95
Query: 484 SPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQ-GEESKKPAPP 532
PQ G ++ G+ S PP + + QQ G + P PP
Sbjct: 96 KPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPP 145
Score = 45.8 bits (107), Expect = 1e-04
Identities = 40/134 (29%), Positives = 44/134 (32%), Gaps = 24/134 (17%)
Query: 414 IKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQS 473
+ +SP PQ PQ PQG P PQ G P Q PQG P
Sbjct: 23 VSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQ----GPPPQGGNKPQGPPPPGKPQ 78
Query: 474 GSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQ------------ 521
G P Q SP+ P Q KP PP QG S SQ
Sbjct: 79 GPPPQGDKSRSPRSPPGKPQGPPPQGGKPQG-------PPAQGGSKSQSARSPPGKPQGP 131
Query: 522 -QGEESKKPAPPHP 534
Q E + PP P
Sbjct: 132 PQQEGNNPQGPPPP 145
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSP-GQAQLGPQL--GQPQPRPPPQGGPRQAQSPQPQRS 453
P GG P + +SA+SP G+ Q PQ PQ PPP GG Q PQ +
Sbjct: 101 PPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGG--NPQQPQAPPA 158
Query: 454 GSPSQQRLSPQGQQPLSP 471
G P PQG +P P
Sbjct: 159 GQPQGPPRPPQGGRPSRP 176
Score = 37.0 bits (84), Expect = 0.050
Identities = 32/109 (29%), Positives = 39/109 (35%), Gaps = 9/109 (8%)
Query: 455 SPSQQRLSPQGQQPLSPQSGSPQQ--QRSPGSPQLSRASSGSSPNQASKPGATLASQPRP 512
SPS +PQG SPQ G+ Q PG PQ G+ P PG P
Sbjct: 28 SPSLIAGNPQGP---SPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG----P 80
Query: 513 PVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDE 561
P QG + KP P P K Q + S R P + +
Sbjct: 81 PPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQ 129
Score = 29.6 bits (65), Expect = 8.0
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 391 SKMSQLPMPGGTAPSPLR-----PWAPQIKSAKSPGQAQLGPQLGQPQ-PRPPPQGGPRQ 444
SK P G P + P P + +P Q Q P GQPQ P PPQGG R
Sbjct: 116 SKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQ-APPAGQPQGPPRPPQGG-RP 173
Query: 445 AQSPQ 449
++ PQ
Sbjct: 174 SRPPQ 178
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 54.7 bits (130), Expect = 2e-07
Identities = 47/128 (36%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 401 GTAPSPLRPWAPQIKSA-KSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRS---GSP 456
G P P +P P + +S G P+ G+P+ PPPQGG Q+Q P P+ G P
Sbjct: 175 GPPPHPGKPEGPPPQGGNQSQGPP---PRPGKPEG-PPPQGG-NQSQGPPPRPGKPEGPP 229
Query: 457 SQQRLSPQGQQPLS-------PQSGS-PQQQRSPGSPQLSRASSGSSPNQASKPGATLAS 508
SQ PQG P PQ G+ PQ+ PG PQ G +P Q P A
Sbjct: 230 SQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQ-GPPPPGGNPQQPLPPPAGKPQ 288
Query: 509 QPRPPVQG 516
P PP QG
Sbjct: 289 GPPPPPQG 296
Score = 51.6 bits (122), Expect = 2e-06
Identities = 52/168 (30%), Positives = 65/168 (38%), Gaps = 26/168 (15%)
Query: 397 PMPGGTAPS--PLRPWAPQIKSAKSPGQAQ-LGPQLGQPQPRPPPQGGPRQAQSPQPQRS 453
P GG P RP P+ + + Q+Q P+ G+P+ PPPQGG Q+Q P P+
Sbjct: 82 PPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEG-PPPQGG-NQSQGPPPRPG 139
Query: 454 ---GSPSQQRLSPQGQQPLS------PQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGA 504
G P Q QG P P G Q Q P P NQ+ P
Sbjct: 140 KPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPP 199
Query: 505 TLASQPRPPVQGRSTSQ---------QGEESK---KPAPPHPHLNKSQ 540
PP QG + SQ +G S+ KP P PH K Q
Sbjct: 200 RPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQ 247
Score = 51.6 bits (122), Expect = 2e-06
Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQ 458
P G P P +P P + P Q P G+PQ PPP G P+Q P P +G P
Sbjct: 236 PQGPPPHPGKPQGPPPQEGNKP---QRPPPPGRPQGPPPPGGNPQQ---PLPPPAGKPQG 289
Query: 459 QRLSPQGQQPLSPQSGSPQQ 478
PQG +P P G P Q
Sbjct: 290 PPPPPQGGRPHRPPQGQPPQ 309
Score = 51.2 bits (121), Expect = 3e-06
Identities = 46/147 (31%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 400 GGTAP--SPLRPWAPQIKSAKSPGQAQ-LGPQLGQPQPRPPPQGGPRQAQSP-------- 448
GG P +P P P+ + + Q+Q P+ G+P+ PPPQGG Q+Q P
Sbjct: 43 GGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEG-PPPQGG-NQSQGPPPRPGKPE 100
Query: 449 -QPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLA 507
QP + G+ SQ G+ P G Q Q P P NQ+ P
Sbjct: 101 GQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 160
Query: 508 SQPRPPVQGRSTSQQGEESKKPAPPHP 534
PP QG G +S+ P PPHP
Sbjct: 161 KPEGPPPQG------GNQSQGP-PPHP 180
Score = 46.2 bits (108), Expect = 8e-05
Identities = 46/161 (28%), Positives = 62/161 (38%), Gaps = 19/161 (11%)
Query: 397 PMPGGTAPS--PLRPWAPQIKSAKSPGQAQ-LGPQLGQPQPRPPPQGGPRQAQSPQPQ-- 451
P GG P RP P+ + Q+Q P+ G+P+ PPPQGG Q+Q P P
Sbjct: 124 PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG-PPPQGG-NQSQGPPPHPG 181
Query: 452 -------RSGSPSQQRLSPQGQQPLSPQSGSPQQQ---RSPGSPQLSRASSGSSPNQASK 501
+ G+ SQ G+ P G Q Q PG P+ + G+ P
Sbjct: 182 KPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQ--GP 239
Query: 502 PGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSL 542
P Q PP +G + + PP P N Q L
Sbjct: 240 PPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPL 280
Score = 35.4 bits (80), Expect = 0.14
Identities = 26/61 (42%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPG---QAQLGPQLGQPQ-PRPPPQGG----PRQAQSP 448
P G P P PQ PG Q L P G+PQ P PPPQGG P Q Q P
Sbjct: 251 PQEGNKPQRPPPPGRPQ--GPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPP 308
Query: 449 Q 449
Q
Sbjct: 309 Q 309
Score = 33.9 bits (76), Expect = 0.42
Identities = 39/132 (29%), Positives = 49/132 (37%), Gaps = 29/132 (21%)
Query: 411 APQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLS 470
+P + S K G+ G QPQ PPP G P G P Q QG P
Sbjct: 28 SPSVISGKPEGRRPQGGN--QPQRTPPPPGKPE----------GRPPQGGNQSQGPPP-- 73
Query: 471 PQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQ--QGEESKK 528
+ G P+ G P S P + KP + +PP QG + SQ K
Sbjct: 74 -RPGKPE-----GPPPQGGNQSQGPPPRPGKP------EGQPP-QGGNQSQGPPPRPGKP 120
Query: 529 PAPPHPHLNKSQ 540
PP N+SQ
Sbjct: 121 EGPPPQGGNQSQ 132
Score = 30.4 bits (67), Expect = 4.7
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 457 SQQRLSPQGQQPLSPQ--SGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPV 514
S Q L+ Q SP SG P+ +R G Q R + P SQ PP
Sbjct: 15 SAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPR 74
Query: 515 QGRSTS---QQGEESKKPAPPHP 534
G+ Q G +S+ P PP P
Sbjct: 75 PGKPEGPPPQGGNQSQGP-PPRP 96
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 53.9 bits (128), Expect = 4e-07
Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 15/144 (10%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRP---PPQGGPRQAQSPQPQRSGS 455
P GT P +P P A+ G + P QP P+ PP G AQ P P +
Sbjct: 355 PPGTTKPPAQPLGPAKPPAQQTGSEK--PSSEQPGPKALAQPPGVGKTPAQQPGPAKP-- 410
Query: 456 PSQQRLSPQGQQPLSPQSG--SPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQ---P 510
P+QQ +P+ PL+ Q G SP + P + + G P Q + PG T A Q
Sbjct: 411 PTQQVGTPK---PLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPT 467
Query: 511 RPPVQGRSTSQQGEESKKPAPPHP 534
+PP Q ++ + PA P P
Sbjct: 468 KPPSQLPGPAKPPPQQPGPAKPPP 491
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/141 (31%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSG 454
Q P PG P + P SA+ G + QL P PP Q GP + P PQ+ G
Sbjct: 442 QQPGPGKI---PAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAK---PPPQQPG 495
Query: 455 SPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQ---ASKPGATLASQPR 511
S P QQP S + P QQ P P + S P+Q ++KP A S +
Sbjct: 496 SAK-----PPSQQPGSTKP--PPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAK 548
Query: 512 PPVQGRSTSQQGEESKKPAPP 532
P Q + S KP P
Sbjct: 549 PSAQQSTKPVSQTGSGKPLQP 569
Score = 47.8 bits (112), Expect = 3e-05
Identities = 51/180 (28%), Positives = 69/180 (38%), Gaps = 12/180 (6%)
Query: 404 PSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQR--L 461
P PL AK+PG + Q P P Q GP + + Q + PSQ
Sbjct: 418 PKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPA 477
Query: 462 SPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQ 521
P QQP P PQQ PGS + GS+ +PG S P+ P + SQ
Sbjct: 478 KPPPQQP-GPAKPPPQQ---PGSAKPPSQQPGSTKPPPQQPGPAKPS-PQQPGSTKPPSQ 532
Query: 522 QGEESK----KPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKSFASL 577
Q +K +P+P P +S + + Q T S AK + L K+ L
Sbjct: 533 QPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVS-PSAKQPPSQGLPKTICPL 591
Score = 47.4 bits (111), Expect = 4e-05
Identities = 41/131 (31%), Positives = 53/131 (40%), Gaps = 16/131 (12%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQ 458
PG T+ P P ++ PG A+ PQ P PP Q G + S QP + P Q
Sbjct: 456 PGKTSAQQTGPTKPP---SQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 459 QR--LSPQGQQPLSPQSGSPQ--------QQRSPGSPQLSRASSGSSPNQASK---PGAT 505
Q P QQP S + S Q QQ SP P +++ S + K P
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTV 572
Query: 506 LASQPRPPVQG 516
S +PP QG
Sbjct: 573 SPSAKQPPSQG 583
Score = 43.9 bits (102), Expect = 4e-04
Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 27/183 (14%)
Query: 393 MSQLPMPGGTA---PSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSP- 448
++Q P G T P P +P Q+ + K Q P L P P P P Q P
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQ---PGLQSPAKAPGPTKTPVQQPGPG 447
Query: 449 ----QPQRSGSPSQQRLSP-QGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPG 503
Q G S Q+ P + L + P QQ P P + S P+Q +PG
Sbjct: 448 KIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQ--QPG 505
Query: 504 ATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAK 563
+T +PP Q Q G KP+P P K S S ++Q+ +P++ A+
Sbjct: 506 ST-----KPPPQ-----QPG--PAKPSPQQPGSTKPPSQQPG-SAKPSAQQPSPAKPSAQ 552
Query: 564 AET 566
T
Sbjct: 553 QST 555
Score = 41.2 bits (95), Expect = 0.003
Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 37/170 (21%)
Query: 399 PGGTAPSPLRPWAPQ-IKSAKSPGQAQLGPQLGQP------QP-----RPPPQGGPRQA- 445
P G PL+ P+ I + PG+ L Q G P QP +PP G P Q
Sbjct: 203 PEGIIKPPLQQQPPKPIPKQQGPGRDPL-QQDGTPKSISSQQPEKIKSQPPGTGKPIQGP 261
Query: 446 -QSPQPQRSGSPSQQRLS-PQGQQP-----------LSPQSGSPQQQRSPGSPQLSRASS 492
Q+PQ + P Q+ S PQ +Q L S P QQ +PG P +
Sbjct: 262 TQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGH 321
Query: 493 GSSPNQASKPGAT-------LASQP---RPPVQGRSTSQQGEESKKPAPP 532
S +KP A LA QP +PPVQ T++ + PA P
Sbjct: 322 EKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKP 371
Score = 39.7 bits (91), Expect = 0.008
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 400 GGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQ 459
G AP P P P++K+A + + QPQ Q P++ +P+ S +P +
Sbjct: 648 GDLAPVPSSP-QPKLKTAPVTTTSAVSKSSPQPQ-----QTSPKKDAAPKQDLSKAPEPK 701
Query: 460 RLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASK--PGATLASQPRPPVQGR 517
+ P +QP S S + ++ P + LS+ + P+ S+ +P+ P +
Sbjct: 702 KPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVK 761
Query: 518 STSQQGEESKKPAPPHPHLNKSQSLTNSLST 548
T+ S P +K QS +T
Sbjct: 762 PTTDLVSSSSATTKPDIPSSKVQSQAEEKTT 792
Score = 38.5 bits (88), Expect = 0.017
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 21/148 (14%)
Query: 401 GTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGS--PSQ 458
G A P +P A+ PG + P + P PP P P Q++GS PS
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVK--PPVQPPGTTKPP-AQPLGPAKPPAQQTGSEKPSS 383
Query: 459 QRLSPQGQQPLSPQSGSPQQQRSPGSP---------QLSRASSGSSPNQASKPGATLASQ 509
++ P+ +P QQ P P L++ SP +A P T Q
Sbjct: 384 EQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQ 443
Query: 510 PRP---PVQ----GRSTSQQGEESKKPA 530
P P P Q G++++QQ +K P+
Sbjct: 444 PGPGKIPAQQAGPGKTSAQQTGPTKPPS 471
Score = 35.4 bits (80), Expect = 0.14
Identities = 38/150 (25%), Positives = 53/150 (35%), Gaps = 16/150 (10%)
Query: 412 PQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSP 471
PQ K A + P L P P PP Q P P + P+QQ + Q +
Sbjct: 281 PQTKQADIVRGESVKPSL--PSPSKPP------IQQPTPGK--PPAQQPGHEKSQPGPAK 330
Query: 472 QSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAP 531
P P + Q P +KP A +PP Q T + S++P P
Sbjct: 331 PPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQ--QTGSEKPSSEQPGP 388
Query: 532 ----PHPHLNKSQSLTNSLSTSDTSQRGTP 557
P + K+ + + T Q GTP
Sbjct: 389 KALAQPPGVGKTPAQQPGPAKPPTQQVGTP 418
Score = 35.0 bits (79), Expect = 0.19
Identities = 42/191 (21%), Positives = 65/191 (34%), Gaps = 26/191 (13%)
Query: 375 GEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPG--QAQLGPQLGQP 432
G E Q D V K + P T SP P K + +P + G + P
Sbjct: 835 GPSSESKGQKQVDPVQKK--EEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTP 892
Query: 433 QPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQ----------GQQPLSPQSG-------- 474
Q P PQ R+ + +P Q +PQ G S S
Sbjct: 893 QQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQP 952
Query: 475 SPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRP----PVQGRSTSQQGEESKKPA 530
P Q PG+P + P P +T + P P PV+ + + E+ + A
Sbjct: 953 GPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKA 1012
Query: 531 PPHPHLNKSQS 541
P + ++++
Sbjct: 1013 EQAPTVKRTET 1023
Score = 33.9 bits (76), Expect = 0.42
Identities = 45/177 (25%), Positives = 65/177 (36%), Gaps = 22/177 (12%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQ 451
K+ P+ +A S P Q K Q + +P+ +PPP QP
Sbjct: 660 KLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPK-KPPP-------LVKQPT 711
Query: 452 RSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQAS--KPGATLASQ 509
GSPS + P LS +P ++ S S Q + P Q KP L S
Sbjct: 712 LHGSPSAKAKQPPEADSLS--KPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSS 769
Query: 510 ----PRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEA 562
+P + Q EE K PP K+ S S S T ++ +P + +A
Sbjct: 770 SSATTKPDIPSSKVQSQAEE--KTTPP----LKTDSAKPSQSFPPTGEKVSPFDSKA 820
Score = 33.1 bits (74), Expect = 0.72
Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 19/174 (10%)
Query: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPR------Q 444
S ++ P + P P P + P + P + +P+ P P
Sbjct: 717 SAKAKQPPEADSLSKPAPPKEPSV-----PSEQDKAP-VADDKPKQPKMVKPTTDLVSSS 770
Query: 445 AQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGA 504
+ + +P S Q + + PL S P Q P ++S S + P AS +
Sbjct: 771 SATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPAS--DS 828
Query: 505 TLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPS 558
+ S P P + + Q KK P K+Q+ + + +G+P+
Sbjct: 829 KIISHPGPSSESKGQKQVDPVQKKEEP-----KKAQTKMSPKPDAKPMPKGSPT 877
Score = 32.3 bits (72), Expect = 1.2
Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 21/194 (10%)
Query: 367 MDSSMPLIG-EHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQL 425
M+ P++ + +E+ +L D + + P+P L P +I+S +
Sbjct: 1182 MEKIPPMVTTDQKQEESKLEKDKASALQEKKPLP---EEKKLIPEEEKIRSEEKK----- 1233
Query: 426 GPQLGQPQPRPPPQGGPRQAQSPQPQRSGSP---SQQRLSPQGQQ----PLSPQSGSPQQ 478
P L + +P P + +A++ P+ SQ +++ + + P + Q G Q
Sbjct: 1234 -PLLEEKKPTPEDKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQ 1292
Query: 479 QRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTS-QQGEESKKPAPPHPHLN 537
+ G P + S P + K T+ QP+PP + + G+E + +
Sbjct: 1293 TKMEGLPS---GTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTS 1349
Query: 538 KSQSLTNSLSTSDT 551
SQ + SDT
Sbjct: 1350 SSQQPKSPQGLSDT 1363
Score = 30.0 bits (66), Expect = 6.1
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 30/190 (15%)
Query: 394 SQLPMPGGTAPS-PLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQR 452
SQLP + S P +P P +S+ AQ P P P PPP P P P
Sbjct: 2374 SQLPSGSPSVSSLPAKP-RPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPT- 2431
Query: 453 SGSPSQQRLSPQGQQPLSPQS------------GSPQQQRSPGSPQLSRASSGSSPNQAS 500
SP L + SP + + RS G P ++R + + P
Sbjct: 2432 --SPKPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLP-VTRICTTAPPPVPP 2488
Query: 501 KP-----GATLASQP---RPPVQGRST-SQQGEESKKPAPPHPH---LNKSQSLTNSLST 548
KP G +P +PP+ + Q ++KP HP L+ + S+T +L T
Sbjct: 2489 KPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSMTLNLVT 2548
Query: 549 SDTSQRGTPS 558
S + +P+
Sbjct: 2549 SADYKLPSPT 2558
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 53.9 bits (128), Expect = 4e-07
Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 15/144 (10%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRP---PPQGGPRQAQSPQPQRSGS 455
P GT P +P P A+ G + P QP P+ PP G AQ P P +
Sbjct: 355 PPGTTKPPAQPLGPAKPPAQQTGSEK--PSSEQPGPKALAQPPGVGKTPAQQPGPAKP-- 410
Query: 456 PSQQRLSPQGQQPLSPQSG--SPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQ---P 510
P+QQ +P+ PL+ Q G SP + P + + G P Q + PG T A Q
Sbjct: 411 PTQQVGTPK---PLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPT 467
Query: 511 RPPVQGRSTSQQGEESKKPAPPHP 534
+PP Q ++ + PA P P
Sbjct: 468 KPPSQLPGPAKPPPQQPGPAKPPP 491
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/141 (31%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSG 454
Q P PG P + P SA+ G + QL P PP Q GP + P PQ+ G
Sbjct: 442 QQPGPGKI---PAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAK---PPPQQPG 495
Query: 455 SPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQ---ASKPGATLASQPR 511
S P QQP S + P QQ P P + S P+Q ++KP A S +
Sbjct: 496 SAK-----PPSQQPGSTKP--PPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAK 548
Query: 512 PPVQGRSTSQQGEESKKPAPP 532
P Q + S KP P
Sbjct: 549 PSAQQSTKPVSQTGSGKPLQP 569
Score = 47.8 bits (112), Expect = 3e-05
Identities = 51/180 (28%), Positives = 69/180 (38%), Gaps = 12/180 (6%)
Query: 404 PSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQR--L 461
P PL AK+PG + Q P P Q GP + + Q + PSQ
Sbjct: 418 PKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPA 477
Query: 462 SPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQ 521
P QQP P PQQ PGS + GS+ +PG S P+ P + SQ
Sbjct: 478 KPPPQQP-GPAKPPPQQ---PGSAKPPSQQPGSTKPPPQQPGPAKPS-PQQPGSTKPPSQ 532
Query: 522 QGEESK----KPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKSFASL 577
Q +K +P+P P +S + + Q T S AK + L K+ L
Sbjct: 533 QPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVS-PSAKQPPSQGLPKTICPL 591
Score = 47.4 bits (111), Expect = 4e-05
Identities = 41/131 (31%), Positives = 53/131 (40%), Gaps = 16/131 (12%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQ 458
PG T+ P P ++ PG A+ PQ P PP Q G + S QP + P Q
Sbjct: 456 PGKTSAQQTGPTKPP---SQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 459 QR--LSPQGQQPLSPQSGSPQ--------QQRSPGSPQLSRASSGSSPNQASK---PGAT 505
Q P QQP S + S Q QQ SP P +++ S + K P
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTV 572
Query: 506 LASQPRPPVQG 516
S +PP QG
Sbjct: 573 SPSAKQPPSQG 583
Score = 43.9 bits (102), Expect = 4e-04
Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 27/183 (14%)
Query: 393 MSQLPMPGGTA---PSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSP- 448
++Q P G T P P +P Q+ + K Q P L P P P P Q P
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQ---PGLQSPAKAPGPTKTPVQQPGPG 447
Query: 449 ----QPQRSGSPSQQRLSP-QGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPG 503
Q G S Q+ P + L + P QQ P P + S P+Q +PG
Sbjct: 448 KIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQ--QPG 505
Query: 504 ATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAK 563
+T +PP Q Q G KP+P P K S S ++Q+ +P++ A+
Sbjct: 506 ST-----KPPPQ-----QPG--PAKPSPQQPGSTKPPSQQPG-SAKPSAQQPSPAKPSAQ 552
Query: 564 AET 566
T
Sbjct: 553 QST 555
Score = 41.2 bits (95), Expect = 0.003
Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 37/170 (21%)
Query: 399 PGGTAPSPLRPWAPQ-IKSAKSPGQAQLGPQLGQP------QP-----RPPPQGGPRQA- 445
P G PL+ P+ I + PG+ L Q G P QP +PP G P Q
Sbjct: 203 PEGIIKPPLQQQPPKPIPKQQGPGRDPL-QQDGTPKSISSQQPEKIKSQPPGTGKPIQGP 261
Query: 446 -QSPQPQRSGSPSQQRLS-PQGQQP-----------LSPQSGSPQQQRSPGSPQLSRASS 492
Q+PQ + P Q+ S PQ +Q L S P QQ +PG P +
Sbjct: 262 TQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGH 321
Query: 493 GSSPNQASKPGAT-------LASQP---RPPVQGRSTSQQGEESKKPAPP 532
S +KP A LA QP +PPVQ T++ + PA P
Sbjct: 322 EKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKP 371
Score = 39.7 bits (91), Expect = 0.008
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 400 GGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQ 459
G AP P P P++K+A + + QPQ Q P++ +P+ S +P +
Sbjct: 648 GDLAPVPSSP-QPKLKTAPVTTTSAVSKSSPQPQ-----QTSPKKDAAPKQDLSKAPEPK 701
Query: 460 RLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASK--PGATLASQPRPPVQGR 517
+ P +QP S S + ++ P + LS+ + P+ S+ +P+ P +
Sbjct: 702 KPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVK 761
Query: 518 STSQQGEESKKPAPPHPHLNKSQSLTNSLST 548
T+ S P +K QS +T
Sbjct: 762 PTTDLVSSSSATTKPDIPSSKVQSQAEEKTT 792
Score = 38.5 bits (88), Expect = 0.017
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 21/148 (14%)
Query: 401 GTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGS--PSQ 458
G A P +P A+ PG + P + P PP P P Q++GS PS
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVK--PPVQPPGTTKPP-AQPLGPAKPPAQQTGSEKPSS 383
Query: 459 QRLSPQGQQPLSPQSGSPQQQRSPGSP---------QLSRASSGSSPNQASKPGATLASQ 509
++ P+ +P QQ P P L++ SP +A P T Q
Sbjct: 384 EQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQ 443
Query: 510 PRP---PVQ----GRSTSQQGEESKKPA 530
P P P Q G++++QQ +K P+
Sbjct: 444 PGPGKIPAQQAGPGKTSAQQTGPTKPPS 471
Score = 35.4 bits (80), Expect = 0.14
Identities = 38/150 (25%), Positives = 53/150 (35%), Gaps = 16/150 (10%)
Query: 412 PQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSP 471
PQ K A + P L P P PP Q P P + P+QQ + Q +
Sbjct: 281 PQTKQADIVRGESVKPSL--PSPSKPP------IQQPTPGK--PPAQQPGHEKSQPGPAK 330
Query: 472 QSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAP 531
P P + Q P +KP A +PP Q T + S++P P
Sbjct: 331 PPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQ--QTGSEKPSSEQPGP 388
Query: 532 ----PHPHLNKSQSLTNSLSTSDTSQRGTP 557
P + K+ + + T Q GTP
Sbjct: 389 KALAQPPGVGKTPAQQPGPAKPPTQQVGTP 418
Score = 35.0 bits (79), Expect = 0.19
Identities = 42/191 (21%), Positives = 65/191 (34%), Gaps = 26/191 (13%)
Query: 375 GEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPG--QAQLGPQLGQP 432
G E Q D V K + P T SP P K + +P + G + P
Sbjct: 835 GPSSESKGQKQVDPVQKK--EEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTP 892
Query: 433 QPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQ----------GQQPLSPQSG-------- 474
Q P PQ R+ + +P Q +PQ G S S
Sbjct: 893 QQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQP 952
Query: 475 SPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRP----PVQGRSTSQQGEESKKPA 530
P Q PG+P + P P +T + P P PV+ + + E+ + A
Sbjct: 953 GPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKA 1012
Query: 531 PPHPHLNKSQS 541
P + ++++
Sbjct: 1013 EQAPTVKRTET 1023
Score = 33.9 bits (76), Expect = 0.42
Identities = 45/177 (25%), Positives = 65/177 (36%), Gaps = 22/177 (12%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQ 451
K+ P+ +A S P Q K Q + +P+ +PPP QP
Sbjct: 660 KLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPK-KPPP-------LVKQPT 711
Query: 452 RSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQAS--KPGATLASQ 509
GSPS + P LS +P ++ S S Q + P Q KP L S
Sbjct: 712 LHGSPSAKAKQPPEADSLS--KPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSS 769
Query: 510 ----PRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEA 562
+P + Q EE K PP K+ S S S T ++ +P + +A
Sbjct: 770 SSATTKPDIPSSKVQSQAEE--KTTPP----LKTDSAKPSQSFPPTGEKVSPFDSKA 820
Score = 33.1 bits (74), Expect = 0.72
Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 19/174 (10%)
Query: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPR------Q 444
S ++ P + P P P + P + P + +P+ P P
Sbjct: 717 SAKAKQPPEADSLSKPAPPKEPSV-----PSEQDKAP-VADDKPKQPKMVKPTTDLVSSS 770
Query: 445 AQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGA 504
+ + +P S Q + + PL S P Q P ++S S + P AS +
Sbjct: 771 SATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPAS--DS 828
Query: 505 TLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPS 558
+ S P P + + Q KK P K+Q+ + + +G+P+
Sbjct: 829 KIISHPGPSSESKGQKQVDPVQKKEEP-----KKAQTKMSPKPDAKPMPKGSPT 877
Score = 32.3 bits (72), Expect = 1.2
Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 21/194 (10%)
Query: 367 MDSSMPLIG-EHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQL 425
M+ P++ + +E+ +L D + + P+P L P +I+S +
Sbjct: 1182 MEKIPPMVTTDQKQEESKLEKDKASALQEKKPLP---EEKKLIPEEEKIRSEEKK----- 1233
Query: 426 GPQLGQPQPRPPPQGGPRQAQSPQPQRSGSP---SQQRLSPQGQQ----PLSPQSGSPQQ 478
P L + +P P + +A++ P+ SQ +++ + + P + Q G Q
Sbjct: 1234 -PLLEEKKPTPEDKKLLPEAKTSAPEEQKHDLLKSQVQIAEEKLEGRVAPKTVQEGKQPQ 1292
Query: 479 QRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTS-QQGEESKKPAPPHPHLN 537
+ G P + S P + K T+ QP+PP + + G+E + +
Sbjct: 1293 TKMEGLPS---GTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVEPGKEKTEKEDDKSDTS 1349
Query: 538 KSQSLTNSLSTSDT 551
SQ + SDT
Sbjct: 1350 SSQQPKSPQGLSDT 1363
Score = 30.0 bits (66), Expect = 6.1
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 30/190 (15%)
Query: 394 SQLPMPGGTAPS-PLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQR 452
SQLP + S P +P P +S+ AQ P P P PPP P P P
Sbjct: 2374 SQLPSGSPSVSSLPAKP-RPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPT- 2431
Query: 453 SGSPSQQRLSPQGQQPLSPQS------------GSPQQQRSPGSPQLSRASSGSSPNQAS 500
SP L + SP + + RS G P ++R + + P
Sbjct: 2432 --SPKPTILPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLP-VTRICTTAPPPVPP 2488
Query: 501 KP-----GATLASQP---RPPVQGRST-SQQGEESKKPAPPHPH---LNKSQSLTNSLST 548
KP G +P +PP+ + Q ++KP HP L+ + S+T +L T
Sbjct: 2489 KPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSSMTLNLVT 2548
Query: 549 SDTSQRGTPS 558
S + +P+
Sbjct: 2549 SADYKLPSPT 2558
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 53.9 bits (128), Expect = 4e-07
Identities = 46/146 (31%), Positives = 55/146 (37%), Gaps = 15/146 (10%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQP-RPPPQGGPRQAQSPQPQRSGS 455
P PG + P P P P + + P Q PQ QP P +PPP P Q Q P P
Sbjct: 49 PGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQ--QPPPHQPPPHPQPHQQQQPPP----- 101
Query: 456 PSQQRLSP---QGQQPLSPQSGSPQQQRS--PGSPQLSRASSGSSPNQASKPGATLASQP 510
P Q P QG P +P S P +P S A GS P P + S P
Sbjct: 102 PPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAP 161
Query: 511 --RPPVQGRSTSQQGEESKKPAPPHP 534
PP S+ + PP P
Sbjct: 162 PGAPPPTPPSSGVPTTPPQAGGPPPP 187
Score = 46.2 bits (108), Expect = 8e-05
Identities = 42/125 (33%), Positives = 52/125 (41%), Gaps = 17/125 (13%)
Query: 413 QIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQ 472
Q + PG Q GP+ P P PPP +Q Q P PQ+ P QQ P Q P PQ
Sbjct: 42 QNRGPMGPGPGQSGPK--PPIPPPPPH---QQQQQPPPQQ--PPPQQ--PPPHQPPPHPQ 92
Query: 473 SGSPQQQRSPGSPQLS-----RASSGSSPNQASKPGATLASQP-RPPVQGRSTSQQGEES 526
QQQ+ P PQ S G +P S P A+ ++ P PP G +
Sbjct: 93 --PHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPT 150
Query: 527 KKPAP 531
P P
Sbjct: 151 PTPPP 155
Score = 42.0 bits (97), Expect = 0.002
Identities = 39/140 (27%), Positives = 49/140 (35%), Gaps = 28/140 (20%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPR---QAQSPQPQRSGS 455
P G+ P P P + SA G P P PP G P QA P P +
Sbjct: 142 PPGSGPGPTPTPPPAVTSAPP----------GAPPPTPPSSGVPTTPPQAGGPPPPPAAV 191
Query: 456 PSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQ 515
P QG P P+ G + PG P+ G P S PG P+PP +
Sbjct: 192 PGPGPGPKQGPGPGGPKGG-----KMPGGPK-----PGGGPG-LSTPG----GHPKPPHR 236
Query: 516 GRSTSQQGEESKKPAPPHPH 535
G + G + P H
Sbjct: 237 GGGEPRGGRQHHPPYHQQHH 256
Score = 37.0 bits (84), Expect = 0.050
Identities = 47/160 (29%), Positives = 57/160 (35%), Gaps = 29/160 (18%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPR----QAQSPQP 450
Q P P P +P Q P Q Q QP PPPQ + Q P P
Sbjct: 68 QQQQPPPQQPPPQQPPPHQPPPHPQPHQ--------QQQPPPPPQDSSKPVVAQGPGPAP 119
Query: 451 QRSGSPSQQRLSPQGQQPLS---PQSG------SPQQQRS--PGSPQLSRASSG--SSPN 497
+P +P P S P SG P S PG+P + SSG ++P
Sbjct: 120 GVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPP 179
Query: 498 QASKPGATLASQPRP---PVQGRSTSQQGEESKKPAPPHP 534
QA P A+ P P P QG + K P P P
Sbjct: 180 QAGGPPPPPAAVPGPGPGPKQGPGPGGP-KGGKMPGGPKP 218
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 53.1 bits (126), Expect = 7e-07
Identities = 53/185 (28%), Positives = 67/185 (36%), Gaps = 33/185 (17%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQL----GQPQPRPPP-----------QGG 441
P GGT PW P + GP G P PP GG
Sbjct: 465 PEAGGTTG----PWTSTTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGG 520
Query: 442 PRQAQ---SPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQ 498
P A+ S QP G + Q P QP+ P G+ + P +P S G++ Q
Sbjct: 521 PPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQ-PATP-----SGGTA--Q 572
Query: 499 ASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPS 558
+PG SQP PP G STS Q P SQ + + TS + Q TP
Sbjct: 573 TPEPGT---SQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPG 629
Query: 559 EDEAK 563
A+
Sbjct: 630 GGTAQ 634
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/192 (27%), Positives = 68/192 (35%), Gaps = 58/192 (30%)
Query: 400 GGTAPSP-----LRP-------WAPQIKSAKSPGQAQLG------PQLGQPQPRPP---- 437
GGT P P LRP P +++ S A G P+ G QP PP
Sbjct: 498 GGTGPHPPSGTTLRPPTSSTPGGPPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGT 557
Query: 438 --------PQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSR 489
P GG AQ+P+P S + QP +P G+ Q + S +
Sbjct: 558 STSHQPATPSGGT--AQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPP 615
Query: 490 ASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTS 549
S+ +Q + PG A P P TSQ P P LS S
Sbjct: 616 GMGTSTSHQPTTPGGGTAQTPEP-----GTSQ-------PMP--------------LSKS 649
Query: 550 DTSQRGTPSEDE 561
S G PSED+
Sbjct: 650 TPSSGGGPSEDK 661
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 53.1 bits (126), Expect = 7e-07
Identities = 50/183 (27%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 409 PWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQP 468
P P + +SP A P + P PPP+ R+ SP P+R SPS +R SP Q+
Sbjct: 550 PSPPPTRRRRSPSPAP--PPRRRRTPTPPPR---RRTPSPPPRRR-SPSPRRYSPPIQRR 603
Query: 469 LSPQ----------SGSPQQQRSPGSPQLSRASSGSSPNQASKP-----GATLASQPRPP 513
SP P+++ SP P R S P Q S P +L+S+ R
Sbjct: 604 YSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHR-- 661
Query: 514 VQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQR----GTPSEDEAKAETIRN 569
+G S S+ E++ P P H + S+S R +P ++ + + R
Sbjct: 662 -KGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRP 720
Query: 570 LRK 572
+R+
Sbjct: 721 IRR 723
Score = 53.1 bits (126), Expect = 7e-07
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 11/150 (7%)
Query: 403 APSPLR--PWAPQIKSAKSPGQAQLGPQLGQPQPR-PPPQGGPRQAQSPQPQRSGSPSQQ 459
+P P R +P K SP + P L + P R+A+SPQP + SPS +
Sbjct: 628 SPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPR 687
Query: 460 RLSPQGQQPLSP----QSGSPQQQRSPG--SPQLSRASSGSSPNQASKPGATLASQPRPP 513
+PQ P S SPQ+++SP + + R S P + K + R
Sbjct: 688 PRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRV 747
Query: 514 VQGRSTSQQGEESKK--PAPPHPHLNKSQS 541
RS S E + K PAPP P ++S S
Sbjct: 748 SSSRSVSGSPEPAAKKPPAPPSPVQSQSPS 777
Score = 49.7 bits (117), Expect = 7e-06
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQIKS----AKSPGQAQLGPQLGQPQPRPPPQGGPRQAQ- 446
++S P P + + +P + S SP ++ + QP R P PR Q
Sbjct: 634 RVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQT 693
Query: 447 --SPQPQRSGSPS--QQRLSPQ-GQQPLSPQSGSPQQQR-----SPGSPQLSRASSGSSP 496
SP P R G+ S Q+R SP +P+ S +P+ ++ SP + R SS S
Sbjct: 694 SSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSV 753
Query: 497 NQASKPGATLASQPRPPVQGRSTSQQG------EESKKPAP-PHPHLNKSQ 540
+ + +P A P PVQ +S S +++K P P P P N Q
Sbjct: 754 SGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQ 804
Score = 48.5 bits (114), Expect = 2e-05
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQ-------AQLGPQLGQPQPRPPPQGGPRQAQSPQ 449
P P +PSP R ++P I+ SP + P + P PPP+ R + SP
Sbjct: 584 PPPRRRSPSPRR-YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKR--RVSHSPP 640
Query: 450 PQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQ 509
P++ SP +R SP S + R SPQ ++ S S +P A S
Sbjct: 641 PKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPS-----PRPRAPQTSS 695
Query: 510 PRPPV-QGRSTSQQGEESKKPA 530
PPV +G S+S Q +S P+
Sbjct: 696 SPPPVRRGASSSPQRRQSPSPS 717
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 16/156 (10%)
Query: 404 PSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSP 463
P P R +SP + P + + PP + P P+R SPS
Sbjct: 575 PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR 634
Query: 464 QGQQPLSPQSGSPQQQRSPGSPQL-SRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQ 522
P Q SP +R SP L S+ GSSP+++++ + RS
Sbjct: 635 VSHSPPPKQRSSPVTKRR--SPSLSSKHRKGSSPSRSTR-------------EARSPQPN 679
Query: 523 GEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPS 558
S P P P + S ++S +R +PS
Sbjct: 680 KRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPS 715
Score = 38.5 bits (88), Expect = 0.017
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 408 RPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPS----QQRLSP 463
R + Q + + S + + +P+ G + + P RS SPS Q+ SP
Sbjct: 483 RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP 542
Query: 464 QGQQPLSPQSGSPQQQRSPG-SPQLSRASSGSSP---NQASKPGATLASQPR---PPVQG 516
+G++ SP +++RSP +P R + + P S P + PR PP+Q
Sbjct: 543 RGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQR 602
Query: 517 RSTSQQGEESKKPAPPHP 534
R + + + +PP P
Sbjct: 603 RYSPSPPPKRRTASPPPP 620
Score = 37.4 bits (85), Expect = 0.038
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 432 PQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRAS 491
P+ RP P+ P + P+R P + R +S SP ++R S LS +S
Sbjct: 311 PRRRPSPRRRPSPRRRTPPRRMPPPPRHR-----------RSRSPVRRRRRSSASLSGSS 359
Query: 492 SGSSPNQA----SKPGATLASQPRPPVQGRSTSQQGEESKKPAPP 532
S SS +++ KP +S PR + ++ +P+PP
Sbjct: 360 SSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPP 404
Score = 37.0 bits (84), Expect = 0.050
Identities = 41/198 (20%), Positives = 68/198 (34%), Gaps = 29/198 (14%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSP------GQAQLG---PQLGQPQPRPPPQGGPRQAQS 447
P P P P P+ + ++SP A L + R PP+ P++ S
Sbjct: 321 PSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSS 380
Query: 448 PQ------------PQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSS 495
P P+R PS P P + S +PQQ ++S + +S
Sbjct: 381 PPRKTRRLSPSASPPRRRHRPSPPATPP----PKTRHSPTPQQSNRTRKSRVSVSPGRTS 436
Query: 496 PNQASKPGATLASQPRPPVQGR----STSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDT 551
G P P + R S S++ + K A + N S+SD+
Sbjct: 437 GKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDS 496
Query: 552 SQRGTPSEDEAKAETIRN 569
+ ++ K ++N
Sbjct: 497 GSSSSSEDERPKRSHVKN 514
Score = 35.8 bits (81), Expect = 0.11
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 443 RQAQSPQPQRSGSP-------SQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSS 495
R+++SP P+R SP S R + SP +++++P P+ S S
Sbjct: 175 RKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPS 234
Query: 496 PNQASK-------PGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLST 548
+A+ P +P+ P S++ +E +K P +KS+S T S S
Sbjct: 235 VQEATSTSDILKVPKPEPIPEPKEP-SPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSP 293
Query: 549 SDTSQR 554
S T R
Sbjct: 294 SHTRPR 299
Score = 33.5 bits (75), Expect = 0.55
Identities = 38/186 (20%), Positives = 66/186 (35%), Gaps = 26/186 (13%)
Query: 403 APSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQP---------QRS 453
+PSP R +P + K + P P P+ + + P+P Q +
Sbjct: 179 SPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEA 238
Query: 454 GSPSQQRLSPQGQQPLSPQSGSPQQQ-RSPGSPQLSRASSGSSPNQASKPGATLASQPRP 512
S S P+ + P+ SP++ + + +R S S S+ + S RP
Sbjct: 239 TSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRP 298
Query: 513 PVQGRSTSQQGEESKKPA----------------PPHPHLNKSQSLTNSLSTSDTSQRGT 556
+ RS S+ ++P+ PP P +S+S S S G+
Sbjct: 299 RRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGS 358
Query: 557 PSEDEA 562
S +
Sbjct: 359 SSSSSS 364
Score = 32.3 bits (72), Expect = 1.2
Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 23/165 (13%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSP 456
P P T P R +P + + ++++ G+ + G + +SP P + P
Sbjct: 401 PSPPATPPPKTRH-SPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSP--APKP 457
Query: 457 SQQRLSP----QGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKP---------- 502
+ LS +G + + S ++Q + Q S S SS ++ +P
Sbjct: 458 RKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEV 517
Query: 503 ------GATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQS 541
+ ++ P P + + TS +G + P+PP +S S
Sbjct: 518 GRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPS 562
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 52.8 bits (125), Expect = 9e-07
Identities = 47/170 (27%), Positives = 64/170 (37%), Gaps = 23/170 (13%)
Query: 393 MSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQR 452
+SQ +PG P+PL PQ P Q P PPP
Sbjct: 781 VSQGQVPGAALPNPLNMLGPQASQLPCPPVTQ-----SPLHPTPPPAS----------TA 825
Query: 453 SGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRP 512
+G PS Q +P G P PQ +P Q +P +S + +P S P AT +Q P
Sbjct: 826 AGMPSLQHTTPPGMTP--PQPAAPTQPSTP----VSSSGQTPTPTPGSVPSAT-QTQSTP 878
Query: 513 PVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEA 562
VQ + +Q + + P P P + QS + GTP A
Sbjct: 879 TVQAAAQAQVTPQPQTPVQP-PSVATPQSSQQQPTPVHAQPPGTPLSQAA 927
Score = 45.8 bits (107), Expect = 1e-04
Identities = 60/217 (27%), Positives = 83/217 (38%), Gaps = 48/217 (22%)
Query: 394 SQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQ--LGPQLGQPQPRPPPQGGP---RQAQSP 448
SQLP P T SPL P P +A Q P + PQP P Q Q+P
Sbjct: 803 SQLPCPPVTQ-SPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTP 861
Query: 449 QPQRSGSPS--------------QQRLSPQGQQPLSP----------QSGSPQQQRSPGS 484
P PS Q +++PQ Q P+ P Q +P + PG+
Sbjct: 862 TPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGT 921
Query: 485 PQLSRASSGSSPNQASKPGA-----TLASQPRP--PVQGRSTSQQGEESKKPAPPHPHLN 537
P LS+A++ S N+ P + T + QP P PV T Q E+++
Sbjct: 922 P-LSQAAA-SIDNRVPTPSSVASAETNSQQPGPDVPVLEMKTETQAEDTEPDPGESKGEP 979
Query: 538 KSQSLTNSL--------STSDTSQRGTPSE-DEAKAE 565
+S+ + L T Q+ P E DE K E
Sbjct: 980 RSEMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKPE 1016
Score = 43.1 bits (100), Expect = 7e-04
Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 21/192 (10%)
Query: 351 VKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPG-----GTAPS 405
+K+ S + ++ ++ S+ L+ + +Q A V ++ P PG G P
Sbjct: 2036 LKSPSSPQQQQQVLNILKSNPQLMAAFI---KQRTAKYVANQPGMQPQPGLQSQPGMQPQ 2092
Query: 406 PLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSG------SPSQQ 459
P P +++ + Q G P+P PPQ +PQ Q +P+
Sbjct: 2093 PGMHQQPSLQNLNAM-------QAGVPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMA 2145
Query: 460 RLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
++PQ ++ L Q QQQ+ Q + GS+ G QP+ P
Sbjct: 2146 SMNPQYREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPA 2205
Query: 520 SQQGEESKKPAP 531
QQ + ++ P
Sbjct: 2206 MQQQQRMQQHLP 2217
Score = 42.7 bits (99), Expect = 0.001
Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 28/172 (16%)
Query: 383 QLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQ-------LGPQL------ 429
Q A + +M + P +PS L+ +KS SP Q Q PQL
Sbjct: 2005 QAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIK 2064
Query: 430 --------GQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRS 481
QP +P P + PQP PS Q L+ Q P+ G P QQ++
Sbjct: 2065 QRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLN--AMQAGVPRPGVPPQQQA 2122
Query: 482 PG--SPQ---LSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKK 528
G +PQ L+ + G +PN AS R +Q + QQ ++ ++
Sbjct: 2123 MGGLNPQGQALNIMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQQ 2174
Score = 40.0 bits (92), Expect = 0.006
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 442 PRQA-QSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQAS 500
P+Q+ SP G+P+QQ +PQ QP + SP G P ++R ++ +
Sbjct: 1840 PQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVS-TG 1898
Query: 501 KPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSED 560
KP + + + P P + + + ++ A HL + ++ NS+ T GTP
Sbjct: 1899 KPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYR-VNINNSMPPGRTGM-GTPGSQ 1956
Query: 561 EA 562
A
Sbjct: 1957 MA 1958
Score = 40.0 bits (92), Expect = 0.006
Identities = 44/174 (25%), Positives = 63/174 (36%), Gaps = 18/174 (10%)
Query: 399 PGGTAPSPLRPWAPQIK-SAKSPGQAQLGPQLGQ-PQPRPPPQGGPRQAQSPQPQRSGSP 456
PGG P+ + Q + Q+ Q+GQ Q P G Q +
Sbjct: 2199 PGGYPPAMQQQQRMQQHLPLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNIQQALQQRIL 2258
Query: 457 SQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLS----RASSGSSPNQASKPGATLASQPRP 512
QQ++ Q P P SPQQ G PQ S + + S NQ P PRP
Sbjct: 2259 QQQQMKQQIGSPGQPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAP--VQSPRP 2316
Query: 513 PVQGRSTSQQGEESKKPAPPH-------PHLNKSQSLTNSLSTSDTSQRGTPSE 559
Q +S +P+P H PH + ++ +S+ D G P +
Sbjct: 2317 QSQPPHSSPSPRIQPQPSPHHVSPQTGSPHPGLAVTMASSI---DQGHLGNPEQ 2367
Score = 36.2 bits (82), Expect = 0.085
Identities = 40/187 (21%), Positives = 65/187 (34%), Gaps = 12/187 (6%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ-PQPRPPPQGGPRQAQSPQPQRSGS 455
P P + SP P + + P G Q P P PP Q P ++ + +
Sbjct: 1871 PQPSPVSMSPAG--FPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREA 1928
Query: 456 PSQQRLSP----QGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPR 511
QQ L P G+P Q +P S + R + S P S P P
Sbjct: 1929 QQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPL 1988
Query: 512 P---PVQG--RSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAKAET 566
P P+ G R ++ P P + +S++ S +PS + + +
Sbjct: 1989 PQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQV 2048
Query: 567 IRNLRKS 573
+ L+ +
Sbjct: 2049 LNILKSN 2055
Score = 35.0 bits (79), Expect = 0.19
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 427 PQLGQPQPRPPPQGGPRQA----QSPQPQRSGSPSQQRLSPQG-------QQPLSPQSGS 475
PQ P P P G P Q Q+PQP PS +SP G Q P + +G
Sbjct: 1840 PQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGK 1899
Query: 476 PQQQ 479
P Q
Sbjct: 1900 PTSQ 1903
Score = 31.2 bits (69), Expect = 2.7
Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 38/141 (26%)
Query: 367 MDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLG 426
M +PL G + + M L Q+ PG A S P Q + Q Q+
Sbjct: 2212 MQQHLPLQGSSMGQMAAQMGQL-----GQMGQPGLGADST--PNIQQALQQRILQQQQMK 2264
Query: 427 PQLG---QPQPRPPPQ----GGPR---------------QAQSPQPQRSGSPSQQ----- 459
Q+G QP P P Q G P+ Q +SP P +S P Q
Sbjct: 2265 QQIGSPGQPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSS 2324
Query: 460 ---RLSPQ-GQQPLSPQSGSP 476
R+ PQ +SPQ+GSP
Sbjct: 2325 PSPRIQPQPSPHHVSPQTGSP 2345
Score = 30.8 bits (68), Expect = 3.6
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 17/123 (13%)
Query: 438 PQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQL-SRASSGSSP 496
P G A SP Q G +Q + + LS SP Q +P L +A+S S P
Sbjct: 84 PGIGNVSASSPVQQGLGGQAQGQPNSANMASLSAMGKSPLSQGDSSAPSLPKQAASTSGP 143
Query: 497 NQASKPGATLASQPRPPVQ-GRSTSQQGEESKKPA--------PPHPHL---NKSQSLTN 544
P A+ A P+ Q G +TS P HP L N SL N
Sbjct: 144 T----PAASQALNPQAQKQVGLATSSPATSQTGPGICMNANFNQTHPGLLNSNSGHSLIN 199
Query: 545 SLS 547
S
Sbjct: 200 QAS 202
Score = 30.8 bits (68), Expect = 3.6
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 404 PSPLRPWAPQIKSAKSPGQAQLG-PQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLS 462
P+P+ P S+ A LG P + QPQ + PQ +Q PQ + + L+
Sbjct: 435 PNPIDP------SSMQRAYAALGLPYMNQPQTQLQPQVPGQQPAQPQTHQ----QMRTLN 484
Query: 463 PQGQQPLS-PQSGSPQQQRSP 482
P G P++ P G Q+ P
Sbjct: 485 PLGNNPMNIPAGGITTDQQPP 505
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 52.8 bits (125), Expect = 9e-07
Identities = 47/170 (27%), Positives = 64/170 (37%), Gaps = 23/170 (13%)
Query: 393 MSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQR 452
+SQ +PG P+PL PQ P Q P PPP
Sbjct: 819 VSQGQVPGAALPNPLNMLGPQASQLPCPPVTQ-----SPLHPTPPPAS----------TA 863
Query: 453 SGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRP 512
+G PS Q +P G P PQ +P Q +P +S + +P S P AT +Q P
Sbjct: 864 AGMPSLQHTTPPGMTP--PQPAAPTQPSTP----VSSSGQTPTPTPGSVPSAT-QTQSTP 916
Query: 513 PVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEA 562
VQ + +Q + + P P P + QS + GTP A
Sbjct: 917 TVQAAAQAQVTPQPQTPVQP-PSVATPQSSQQQPTPVHAQPPGTPLSQAA 965
Score = 45.8 bits (107), Expect = 1e-04
Identities = 60/217 (27%), Positives = 83/217 (38%), Gaps = 48/217 (22%)
Query: 394 SQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQ--LGPQLGQPQPRPPPQGGP---RQAQSP 448
SQLP P T SPL P P +A Q P + PQP P Q Q+P
Sbjct: 841 SQLPCPPVTQ-SPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTP 899
Query: 449 QPQRSGSPS--------------QQRLSPQGQQPLSP----------QSGSPQQQRSPGS 484
P PS Q +++PQ Q P+ P Q +P + PG+
Sbjct: 900 TPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGT 959
Query: 485 PQLSRASSGSSPNQASKPGA-----TLASQPRP--PVQGRSTSQQGEESKKPAPPHPHLN 537
P LS+A++ S N+ P + T + QP P PV T Q E+++
Sbjct: 960 P-LSQAAA-SIDNRVPTPSSVASAETNSQQPGPDVPVLEMKTETQAEDTEPDPGESKGEP 1017
Query: 538 KSQSLTNSL--------STSDTSQRGTPSE-DEAKAE 565
+S+ + L T Q+ P E DE K E
Sbjct: 1018 RSEMMEEDLQGASQVKEETDIAEQKSEPMEVDEKKPE 1054
Score = 43.1 bits (100), Expect = 7e-04
Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 21/192 (10%)
Query: 351 VKAVHSKDGRDYIIEVMDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPG-----GTAPS 405
+K+ S + ++ ++ S+ L+ + +Q A V ++ P PG G P
Sbjct: 2074 LKSPSSPQQQQQVLNILKSNPQLMAAFI---KQRTAKYVANQPGMQPQPGLQSQPGMQPQ 2130
Query: 406 PLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSG------SPSQQ 459
P P +++ + Q G P+P PPQ +PQ Q +P+
Sbjct: 2131 PGMHQQPSLQNLNAM-------QAGVPRPGVPPQQQAMGGLNPQGQALNIMNPGHNPNMA 2183
Query: 460 RLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRST 519
++PQ ++ L Q QQQ+ Q + GS+ G QP+ P
Sbjct: 2184 SMNPQYREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPA 2243
Query: 520 SQQGEESKKPAP 531
QQ + ++ P
Sbjct: 2244 MQQQQRMQQHLP 2255
Score = 42.7 bits (99), Expect = 0.001
Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 28/172 (16%)
Query: 383 QLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQ-------LGPQL------ 429
Q A + +M + P +PS L+ +KS SP Q Q PQL
Sbjct: 2043 QAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIK 2102
Query: 430 --------GQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRS 481
QP +P P + PQP PS Q L+ Q P+ G P QQ++
Sbjct: 2103 QRTAKYVANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLN--AMQAGVPRPGVPPQQQA 2160
Query: 482 PG--SPQ---LSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKK 528
G +PQ L+ + G +PN AS R +Q + QQ ++ ++
Sbjct: 2161 MGGLNPQGQALNIMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQQ 2212
Score = 40.0 bits (92), Expect = 0.006
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 442 PRQA-QSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQAS 500
P+Q+ SP G+P+QQ +PQ QP + SP G P ++R ++ +
Sbjct: 1878 PQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVS-TG 1936
Query: 501 KPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSED 560
KP + + + P P + + + ++ A HL + ++ NS+ T GTP
Sbjct: 1937 KPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYR-VNINNSMPPGRTGM-GTPGSQ 1994
Query: 561 EA 562
A
Sbjct: 1995 MA 1996
Score = 40.0 bits (92), Expect = 0.006
Identities = 44/174 (25%), Positives = 63/174 (36%), Gaps = 18/174 (10%)
Query: 399 PGGTAPSPLRPWAPQIK-SAKSPGQAQLGPQLGQ-PQPRPPPQGGPRQAQSPQPQRSGSP 456
PGG P+ + Q + Q+ Q+GQ Q P G Q +
Sbjct: 2237 PGGYPPAMQQQQRMQQHLPLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNIQQALQQRIL 2296
Query: 457 SQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLS----RASSGSSPNQASKPGATLASQPRP 512
QQ++ Q P P SPQQ G PQ S + + S NQ P PRP
Sbjct: 2297 QQQQMKQQIGSPGQPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAP--VQSPRP 2354
Query: 513 PVQGRSTSQQGEESKKPAPPH-------PHLNKSQSLTNSLSTSDTSQRGTPSE 559
Q +S +P+P H PH + ++ +S+ D G P +
Sbjct: 2355 QSQPPHSSPSPRIQPQPSPHHVSPQTGSPHPGLAVTMASSI---DQGHLGNPEQ 2405
Score = 36.2 bits (82), Expect = 0.085
Identities = 40/187 (21%), Positives = 65/187 (34%), Gaps = 12/187 (6%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ-PQPRPPPQGGPRQAQSPQPQRSGS 455
P P + SP P + + P G Q P P PP Q P ++ + +
Sbjct: 1909 PQPSPVSMSPAG--FPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREA 1966
Query: 456 PSQQRLSP----QGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPR 511
QQ L P G+P Q +P S + R + S P S P P
Sbjct: 1967 QQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPL 2026
Query: 512 P---PVQG--RSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAKAET 566
P P+ G R ++ P P + +S++ S +PS + + +
Sbjct: 2027 PQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQV 2086
Query: 567 IRNLRKS 573
+ L+ +
Sbjct: 2087 LNILKSN 2093
Score = 35.0 bits (79), Expect = 0.19
Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 11/64 (17%)
Query: 427 PQLGQPQPRPPPQGGPRQA----QSPQPQRSGSPSQQRLSPQG-------QQPLSPQSGS 475
PQ P P P G P Q Q+PQP PS +SP G Q P + +G
Sbjct: 1878 PQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGK 1937
Query: 476 PQQQ 479
P Q
Sbjct: 1938 PTSQ 1941
Score = 31.2 bits (69), Expect = 2.7
Identities = 40/141 (28%), Positives = 53/141 (37%), Gaps = 38/141 (26%)
Query: 367 MDSSMPLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLG 426
M +PL G + + M L Q+ PG A S P Q + Q Q+
Sbjct: 2250 MQQHLPLQGSSMGQMAAQMGQL-----GQMGQPGLGADST--PNIQQALQQRILQQQQMK 2302
Query: 427 PQLG---QPQPRPPPQ----GGPR---------------QAQSPQPQRSGSPSQQ----- 459
Q+G QP P P Q G P+ Q +SP P +S P Q
Sbjct: 2303 QQIGSPGQPNPMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSS 2362
Query: 460 ---RLSPQ-GQQPLSPQSGSP 476
R+ PQ +SPQ+GSP
Sbjct: 2363 PSPRIQPQPSPHHVSPQTGSP 2383
Score = 30.8 bits (68), Expect = 3.6
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 17/123 (13%)
Query: 438 PQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQL-SRASSGSSP 496
P G A SP Q G +Q + + LS SP Q +P L +A+S S P
Sbjct: 84 PGIGNVSASSPVQQGLGGQAQGQPNSANMASLSAMGKSPLSQGDSSAPSLPKQAASTSGP 143
Query: 497 NQASKPGATLASQPRPPVQ-GRSTSQQGEESKKPA--------PPHPHL---NKSQSLTN 544
P A+ A P+ Q G +TS P HP L N SL N
Sbjct: 144 T----PAASQALNPQAQKQVGLATSSPATSQTGPGICMNANFNQTHPGLLNSNSGHSLIN 199
Query: 545 SLS 547
S
Sbjct: 200 QAS 202
Score = 30.8 bits (68), Expect = 3.6
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 404 PSPLRPWAPQIKSAKSPGQAQLG-PQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLS 462
P+P+ P S+ A LG P + QPQ + PQ +Q PQ + + L+
Sbjct: 473 PNPIDP------SSMQRAYAALGLPYMNQPQTQLQPQVPGQQPAQPQTHQ----QMRTLN 522
Query: 463 PQGQQPLS-PQSGSPQQQRSP 482
P G P++ P G Q+ P
Sbjct: 523 PLGNNPMNIPAGGITTDQQPP 543
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 52.0 bits (123), Expect = 1e-06
Identities = 48/171 (28%), Positives = 66/171 (38%), Gaps = 14/171 (8%)
Query: 397 PMPGGTAPSPLRP---WAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRS 453
PM P P P AP ++ SP + L +P P+ PP Q+ +
Sbjct: 746 PMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPA 805
Query: 454 GSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPP 513
P Q SP P+SP + P Q P L+ P+ + P TL + RPP
Sbjct: 806 SFPGQAPFSPSASLPMSPLATPPPQ----APPVLAAPLLQVPPSPPASP--TLQAPRRPP 859
Query: 514 VQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSD-----TSQRGTPSE 559
G TS G P P S+S +++LS D +S TP E
Sbjct: 860 TPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE 910
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/141 (29%), Positives = 53/141 (37%), Gaps = 8/141 (5%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQP--QPRPPPQGGPRQAQSPQ--PQR 452
P P PSPL P+ S+ + Q P L P Q P P P PQ P
Sbjct: 566 PCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXL 625
Query: 453 SGSPSQQRLSPQGQQPLSP-QSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPR 511
+ P Q SP PLSP + SPQ +P + + + SP + A +
Sbjct: 626 ALPPLQAPPSPPASPPLSPLATPSPQ---APNALAVHLLQAPFSPPPSPPVQAPFSPPAS 682
Query: 512 PPVQGRSTSQQGEESKKPAPP 532
PPV +T APP
Sbjct: 683 PPVSPSATPPSQAPPSLAAPP 703
Score = 38.5 bits (88), Expect = 0.017
Identities = 40/179 (22%), Positives = 63/179 (35%), Gaps = 10/179 (5%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQ--PRPPPQGGPR-QAQSP 448
K ++ P + R + SP A+ G PRP P PR + P
Sbjct: 146 KATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGP 205
Query: 449 QPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLAS 508
+ S + P P +G Q+ P S LS SS + + ++ G +
Sbjct: 206 RKSVSSASEHSTTEPSPAARRRPSAGGGLQR--PASRSLS--SSATPLSSPARSGPSARG 261
Query: 509 QPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAKAETI 567
PR P +G ++ +P P + LS+S + TPS KA +
Sbjct: 262 TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA---TPSPSGTKARPV 317
Score = 38.5 bits (88), Expect = 0.017
Identities = 44/157 (28%), Positives = 56/157 (35%), Gaps = 20/157 (12%)
Query: 393 MSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQR 452
+S L P AP L P +++ SP + L P P+ P Q+P
Sbjct: 611 LSPLATPPPQAPPXLA--LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 668
Query: 453 SGSPSQQRLSPQGQQPLSPQSGSPQQQ---------RSPGSPQLS--RASSGSSPNQASK 501
P Q SP P+SP + P Q + P SP S + S + P QA
Sbjct: 669 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 728
Query: 502 PGAT--LASQPRPPVQGRSTSQQGEESKKPAPPHPHL 536
P A L P PP S S P P P L
Sbjct: 729 PLAAPPLQVPPSPP-----ASPPMSPSATPPPRVPPL 760
Score = 38.5 bits (88), Expect = 0.017
Identities = 42/165 (25%), Positives = 55/165 (33%), Gaps = 8/165 (4%)
Query: 372 PLIGEHVEEDRQLMADLVVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQ 431
PL + L L+ + S P P AP P SA P QA P L
Sbjct: 644 PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP--PSLAA 701
Query: 432 P--QPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSR 489
P Q P P P + S P P +P Q P SP + P + P++
Sbjct: 702 PPLQVPPSPPASPPMSPSATPPPQAPPPLA--APPLQVPPSPPASPPMSPSATPPPRVPP 759
Query: 490 ASSGSSPNQASKPGATLASQP--RPPVQGRSTSQQGEESKKPAPP 532
+ P A+L P +PP Q P+PP
Sbjct: 760 LLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP 804
Score = 38.1 bits (87), Expect = 0.022
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 9/145 (6%)
Query: 422 QAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRL----SPQGQQPLSPQSGSPQ 477
+A+ G P R P PR SP+P +P+ R+ G++PL+ ++G
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIG 66
Query: 478 QQRSPGSPQLS---RASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHP 534
P S + R++ SS N AS+P A+ + PP + S + P
Sbjct: 67 GATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP 126
Query: 535 HLNKSQSLTNSLSTSDTSQRGTPSE 559
+ L +S +T RG +E
Sbjct: 127 GPLGQKGL--RISAEETVARGKATE 149
Score = 36.2 bits (82), Expect = 0.085
Identities = 48/177 (27%), Positives = 62/177 (35%), Gaps = 38/177 (21%)
Query: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQG------GPRQ 444
S + LPM P P P + P P L P+ RPP G GPR
Sbjct: 814 SPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR-RPPTPGPDTSVSGPRL 872
Query: 445 ----AQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRS-------------PGSPQL 487
A P P S SPS P S + +P++ R P +L
Sbjct: 873 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 932
Query: 488 SRA-----SSGSSPNQASKPGATLASQPRPPVQGRSTSQ--------QGEESKKPAP 531
+ S G +P A + GA A P PP G ++ +G ES PAP
Sbjct: 933 AACHPAAWSRGPAPPLAFR-GAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAP 988
Score = 32.7 bits (73), Expect = 0.94
Identities = 35/125 (28%), Positives = 41/125 (32%), Gaps = 19/125 (15%)
Query: 397 PMPGGTAPSPLRPWAPQ-----------IKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQA 445
P+ AP PW P I + P A P P P P GG A
Sbjct: 947 PLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAA 1006
Query: 446 QSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRA-----SSGSSPNQAS 500
+ S SP Q RL G+ PL S Q + L+ A SG P A
Sbjct: 1007 GAGAGASSRSPKQARL---GELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 1063
Query: 501 KPGAT 505
G T
Sbjct: 1064 GGGVT 1068
Score = 32.0 bits (71), Expect = 1.6
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 36/208 (17%)
Query: 408 RPWAPQIKSAKSP--GQAQLGPQL-GQPQ-PRPPPQGGPRQAQSPQPQRSGSPSQQR--- 460
RP + + S+ +P A+ GP G P+ P P Q P+ Q+ +P + P +
Sbjct: 236 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 295
Query: 461 LSPQGQQPLSPQSGSPQQQRS---------------PGSPQLSRASSGSSPNQASKPG-A 504
L P PL+ S S + R P SP L+ + P+ ++ P
Sbjct: 296 LGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQ 355
Query: 505 TLASQP-RPPVQG----RSTSQQGEESKKPAPP--HPHLNKSQSL---TNSLSTSD---T 551
TL S P PP Q + Q S + PP PH S SL + L+ S T
Sbjct: 356 TLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQAT 415
Query: 552 SQRGTPSEDEAKAETIRNLRKSFASLFS 579
+ G+P+ + + R++ ASL S
Sbjct: 416 TSLGSPTLQATHSFLTMSPRQTQASLTS 443
Score = 30.8 bits (68), Expect = 3.6
Identities = 44/132 (33%), Positives = 50/132 (37%), Gaps = 26/132 (19%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRP---PPQGGPRQAQSPQPQRS 453
P+P PSP P A + A P P L Q P P PP P +P Q
Sbjct: 326 PLPATLPPSP--PLATPLPLA--PPSPSAPPSL-QTLPSPPATPPSQAPPSMTTPPMQ-- 378
Query: 454 GSPSQQRL----------SPQGQQPLSPQS-GSPQQQRSPGSPQLSRASS--GSSPNQAS 500
PS Q + SP Q P SP + S Q S GSP L S SP Q
Sbjct: 379 APPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQ 438
Query: 501 KPGATLASQPRP 512
A+L S RP
Sbjct: 439 ---ASLTSPSRP 447
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 52.0 bits (123), Expect = 1e-06
Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 25/200 (12%)
Query: 396 LPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQ------------GGPR 443
LP+ GG+AP PL+ P +P A L QP P PPQ
Sbjct: 228 LPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQN 287
Query: 444 QAQSPQPQRSG-SPSQQRLSPQGQQPLS---PQSGSPQQQRSPGSPQLSRASSGSSPNQA 499
++ + Q++G P ++P Q P S +P Q PG P + S P+
Sbjct: 288 AVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLV 347
Query: 500 S--KPGATLA--SQPRPPVQGRSTSQQGEESKKPAP-PHPHLNKSQSLTNSL----STSD 550
S PG+ LA +QP P + + G PA P L QS++N L +
Sbjct: 348 STVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLE 407
Query: 551 TSQRGTPSEDEAKAETIRNL 570
++ P+ +A + R+L
Sbjct: 408 WQEKPKPASVDANTKLTRSL 427
Score = 38.5 bits (88), Expect = 0.017
Identities = 42/142 (29%), Positives = 46/142 (32%), Gaps = 22/142 (15%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQ-------GGPRQAQSPQ 449
P P GTA P P APQ + G GP L P PQ P Q P
Sbjct: 605 PQPQGTAQPP--PGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPP 662
Query: 450 PQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQ 509
PQ S L P G L P Q G P L + S P Q
Sbjct: 663 PQ----ASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQL---------P 709
Query: 510 PRPPVQGRSTSQQGEESKKPAP 531
PR P+ G+ G P P
Sbjct: 710 PRAPLPGQMLLSGGPRGPVPQP 731
Score = 35.8 bits (81), Expect = 0.11
Identities = 41/129 (31%), Positives = 46/129 (35%), Gaps = 17/129 (13%)
Query: 407 LRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQ 466
LRP PQ + A GQPQP+ Q P Q P SG P P G
Sbjct: 585 LRPPQPQPQGTVGASGAT-----GQPQPQGTAQPPPGAPQGPPGAASGPP------PPGP 633
Query: 467 QPLSPQSGSPQQQRS----PGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQ 522
G+ Q RS P PQ +S + PGA A P PP QG Q
Sbjct: 634 ILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAP-ALLP-PPHQGLGQPQL 691
Query: 523 GEESKKPAP 531
G P P
Sbjct: 692 GPPLLHPPP 700
Score = 34.7 bits (78), Expect = 0.25
Identities = 37/129 (28%), Positives = 46/129 (35%), Gaps = 19/129 (14%)
Query: 425 LGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQ------Q 478
LGP L + Q RP + PQPQ + S PQ Q P G+PQ
Sbjct: 568 LGPIL-EDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAAS 626
Query: 479 QRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKP-------AP 531
P P L + G++P S L P PP G Q +P P
Sbjct: 627 GPPPPGPILRPQNPGANPQLRS-----LLLNPPPPQTGVPPPQASLHHLQPPGAPALLPP 681
Query: 532 PHPHLNKSQ 540
PH L + Q
Sbjct: 682 PHQGLGQPQ 690
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/150 (32%), Positives = 64/150 (42%), Gaps = 35/150 (23%)
Query: 388 LVVSKMSQLPM---PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQ 444
L +++S LP PGG + + W + P Q Q QPQ PPQ P Q
Sbjct: 339 LTSAELSSLPAFSSPGGLSLGNVTAW-------QQPQQPQ------QPQQPQPPQQQPPQ 385
Query: 445 AQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGA 504
Q PQPQ+ P Q + PQ Q L P S S PGSP G++ + P
Sbjct: 386 PQQPQPQQ---PQQPQQPPQQQSHLVPVSLS---NLIPGSP---LPHVGAALTVTTHPHI 436
Query: 505 TLASQPRPPVQGRSTSQQGEESKKPAPPHP 534
++ S+P P + RS PAPP P
Sbjct: 437 SIKSEPVSPSRERS----------PAPPPP 456
Score = 35.8 bits (81), Expect = 0.11
Identities = 36/146 (24%), Positives = 49/146 (33%), Gaps = 45/146 (30%)
Query: 419 SPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQ 478
SPG LG QP+ P Q P+Q Q PQ QQP PQ PQQ
Sbjct: 352 SPGGLSLGNVTAWQQPQQPQQ--PQQPQPPQ----------------QQPPQPQQPQPQQ 393
Query: 479 QRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLNK 538
+ P +PP Q + P P PH+
Sbjct: 394 PQQP---------------------------QQPPQQQSHLVPVSLSNLIPGSPLPHVGA 426
Query: 539 SQSLTNSLSTSDTSQRGTPSEDEAKA 564
+ ++T S S+ +PS + + A
Sbjct: 427 ALTVTTHPHISIKSEPVSPSRERSPA 452
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 51.6 bits (122), Expect = 2e-06
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 28/158 (17%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQ 451
K+ + P P+PL P PQ PG + P+L P P P P P SP+P
Sbjct: 136 KLGSVLSPESPKPTPLTPLEPQ-----KPGSV-VSPELQTPLPSPEPSK-PASVSSPEPP 188
Query: 452 RS------------GSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQL---SRASSGSSP 496
+S SP Q+ +P + + +P+ Q+ P+ ASS SP
Sbjct: 189 KSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESP 248
Query: 497 NQASKP---GATLASQPRPPVQGRSTSQQGEESKKPAP 531
A+ P G + A+ P R+TS E +KP+P
Sbjct: 249 VLAASPEPWGPSPAASPESRKSARTTS---PEPRKPSP 283
Score = 45.1 bits (105), Expect = 2e-04
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 29/211 (13%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQ--IKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQ 449
K++ +P P P+P+ P + + + + K Q+ LG P P P A SP+
Sbjct: 198 KLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPES--PVLAASPE 255
Query: 450 P---QRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATL 506
P + SP + R S + P P+ SP + P P + + P A PG+
Sbjct: 256 PWGPSPAASP-ESRKSARTTSP-EPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWK 313
Query: 507 ASQPRPPVQGRSTSQQGEESKKPAPPHPHLNK--------------------SQSLTNSL 546
P P +S KPA P P ++ S + S
Sbjct: 314 PGPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSS 373
Query: 547 STSDTSQRGTPSEDEAKAETIRNLRKSFASL 577
S S +S + P+ E+ LRK+ +L
Sbjct: 374 SVSPSSWKSPPASPESWKSGPPELRKTAPTL 404
Score = 41.2 bits (95), Expect = 0.003
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 389 VVSKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSP 448
VVS Q P+P +P P +P S SP + P + P P P Q P
Sbjct: 162 VVSPELQTPLP---SPEPSKP-----ASVSSPEPPKSVPVCESQKLAPVPSPEP---QKP 210
Query: 449 QPQRSGSPSQQRLSPQGQ-QPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLA 507
P S +P+ Q Q P++ P SP SP L+ + P+ A+ P + +
Sbjct: 211 APVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKS 270
Query: 508 SQPRPPVQGRSTSQQGEESKKPAP 531
++ P + + + E KP P
Sbjct: 271 ARTTSPEPRKPSPSESPEPWKPFP 294
Score = 40.0 bits (92), Expect = 0.006
Identities = 47/159 (29%), Positives = 62/159 (38%), Gaps = 18/159 (11%)
Query: 392 KMSQLPMPGGTAPSPLR---PWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSP 448
K ++ P PSP PW P A SP + P + +P P G PR +S
Sbjct: 269 KSARTTSPEPRKPSPSESPEPWKPF--PAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSN 326
Query: 449 QPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPG----SPQLSRAS---SGSSPNQASK 501
SG + +P +SP P SPG +P +S AS S SP+
Sbjct: 327 PSASSGPWKPAKPAPS----VSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKS 382
Query: 502 PGATLASQPRPPVQGRSTSQQ-GEESKKPAPP-HPHLNK 538
P A+ S P + R T+ E K PP P L K
Sbjct: 383 PPASPESWKSGPPELRKTAPTLSPEHWKAVPPVSPELRK 421
Score = 35.8 bits (81), Expect = 0.11
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 397 PMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPP--QGGPRQAQ------SP 448
P+P +P P +P P + SA S + + P + P P + GP + + SP
Sbjct: 350 PIPS-VSPGPWKP-TPSVSSA-SWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSP 406
Query: 449 QPQRSGSPSQQRLSPQGQQPLSPQ----SGSPQQQRSPGSPQLSRASSG---SSPNQASK 501
+ ++ P L G PLSP+ +GSP+ ++ GSP L + S +SP
Sbjct: 407 EHWKAVPPVSPELRKPGP-PLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDF 465
Query: 502 PGATLASQPRPPVQGRST------SQQGEESKKPAPPHP 534
P + +S+ P +S+ E++KP P P
Sbjct: 466 PESQKSSRGGSPDLWKSSFFIEPQKPVFPETRKPGPSGP 504
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 50.8 bits (120), Expect = 3e-06
Identities = 50/170 (29%), Positives = 67/170 (39%), Gaps = 13/170 (7%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSG 454
Q+P P A P+ P A A P A QL +P P+ PP Q+ +
Sbjct: 480 QVP-PSPPASPPMSPSATPPPQAPPPLAAP-PLQLAKPPPQAPPALATPPLQALPSPPAS 537
Query: 455 SPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPV 514
P Q SP P+SP + P Q P L+ P+ + P TL + RPP
Sbjct: 538 FPGQAPFSPSASLPMSPLATPPPQ----APPVLAAPLLQVPPSPPASP--TLQAPRRPPT 591
Query: 515 QGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSD-----TSQRGTPSE 559
G TS G P P S+S +++LS D +S TP E
Sbjct: 592 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE 641
Score = 39.7 bits (91), Expect = 0.008
Identities = 41/152 (26%), Positives = 55/152 (36%), Gaps = 14/152 (9%)
Query: 393 MSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQR 452
+S L P AP L P +++ SP + L P P+ P Q+P
Sbjct: 386 LSPLATPPPQAPPALA--LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 443
Query: 453 SGSPSQQRLSPQGQQPLSPQSGSPQQQ---------RSPGSPQLS--RASSGSSPNQASK 501
P Q SP P+SP + P Q + P SP S + S + P QA
Sbjct: 444 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 503
Query: 502 PGATLASQ-PRPPVQGRSTSQQGEESKKPAPP 532
P A Q +PP Q P+PP
Sbjct: 504 PLAAPPLQLAKPPPQAPPALATPPLQALPSPP 535
Score = 38.1 bits (87), Expect = 0.022
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 9/145 (6%)
Query: 422 QAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRL----SPQGQQPLSPQSGSPQ 477
+A+ G P R P PR SP+P +P+ R+ G++PL+ ++G
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIG 66
Query: 478 QQRSPGSPQLS---RASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHP 534
P S + R++ SS N AS+P A+ + PP + S + P
Sbjct: 67 GATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP 126
Query: 535 HLNKSQSLTNSLSTSDTSQRGTPSE 559
+ L +S +T RG +E
Sbjct: 127 GPLGQKGL--RISAEETVARGKATE 149
Score = 36.2 bits (82), Expect = 0.085
Identities = 39/174 (22%), Positives = 61/174 (35%), Gaps = 10/174 (5%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQ--PRPPPQGGPR-QAQSP 448
K ++ P + R + SP A+ G PRP P PR + P
Sbjct: 146 KATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGP 205
Query: 449 QPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLAS 508
+ S + P P +G Q+ P S LS SS + + ++ G +
Sbjct: 206 RKSVSSASEHSTTEPSPAARRRPSAGGGLQR--PASRSLS--SSATPLSSPARSGPSARG 261
Query: 509 QPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEA 562
PR P +G ++ +P P + LS+S + TPS A
Sbjct: 262 TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA---TPSPSAA 312
Score = 36.2 bits (82), Expect = 0.085
Identities = 48/177 (27%), Positives = 62/177 (35%), Gaps = 38/177 (21%)
Query: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQG------GPRQ 444
S + LPM P P P + P P L P+ RPP G GPR
Sbjct: 545 SPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR-RPPTPGPDTSVSGPRL 603
Query: 445 ----AQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRS-------------PGSPQL 487
A P P S SPS P S + +P++ R P +L
Sbjct: 604 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 663
Query: 488 SRA-----SSGSSPNQASKPGATLASQPRPPVQGRSTSQ--------QGEESKKPAP 531
+ S G +P A + GA A P PP G ++ +G ES PAP
Sbjct: 664 AACHPAAWSRGPAPPLAFR-GAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAP 719
Score = 35.4 bits (80), Expect = 0.14
Identities = 36/149 (24%), Positives = 46/149 (30%), Gaps = 4/149 (2%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQ 458
P A PL P A A + L P P PP Q SP S +P
Sbjct: 409 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 468
Query: 459 QR----LSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPV 514
Q +P Q P SP + P + PQ + A P + PP+
Sbjct: 469 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPL 528
Query: 515 QGRSTSQQGEESKKPAPPHPHLNKSQSLT 543
Q + + P P L S T
Sbjct: 529 QALPSPPASFPGQAPFSPSASLPMSPLAT 557
Score = 33.5 bits (75), Expect = 0.55
Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 25/150 (16%)
Query: 408 RPWAPQIKSAKSP--GQAQLGPQL-GQPQ-PRPPPQGGPRQAQSPQPQRSGSPSQQR--- 460
RP + + S+ +P A+ GP G P+ P P Q P+ Q+ +P + P +
Sbjct: 236 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 295
Query: 461 LSPQGQQPLSPQSGSP--QQQRSPGSPQLSRASSGS---------SPNQASKPGA--TLA 507
L P PL+ S S Q Q P P +SS + +P S P + TL
Sbjct: 296 LGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLP 355
Query: 508 SQPRPPVQGRSTS-----QQGEESKKPAPP 532
S P P +TS Q S P+PP
Sbjct: 356 SPPATPPSQATTSLGSPTLQATHSFLPSPP 385
Score = 32.7 bits (73), Expect = 0.94
Identities = 35/125 (28%), Positives = 41/125 (32%), Gaps = 19/125 (15%)
Query: 397 PMPGGTAPSPLRPWAPQ-----------IKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQA 445
P+ AP PW P I + P A P P P P GG A
Sbjct: 678 PLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAA 737
Query: 446 QSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRA-----SSGSSPNQAS 500
+ S SP Q RL G+ PL S Q + L+ A SG P A
Sbjct: 738 GAGAGASSRSPKQARL---GELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 794
Query: 501 KPGAT 505
G T
Sbjct: 795 GGGVT 799
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 50.8 bits (120), Expect = 3e-06
Identities = 50/170 (29%), Positives = 67/170 (39%), Gaps = 13/170 (7%)
Query: 395 QLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSG 454
Q+P P A P+ P A A P A QL +P P+ PP Q+ +
Sbjct: 441 QVP-PSPPASPPMSPSATPPPQAPPPLAAP-PLQLAKPPPQAPPALATPPLQALPSPPAS 498
Query: 455 SPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPV 514
P Q SP P+SP + P Q P L+ P+ + P TL + RPP
Sbjct: 499 FPGQAPFSPSASLPMSPLATPPPQ----APPVLAAPLLQVPPSPPASP--TLQAPRRPPT 552
Query: 515 QGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSD-----TSQRGTPSE 559
G TS G P P S+S +++LS D +S TP E
Sbjct: 553 PGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEE 602
Score = 39.7 bits (91), Expect = 0.008
Identities = 41/152 (26%), Positives = 55/152 (36%), Gaps = 14/152 (9%)
Query: 393 MSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQR 452
+S L P AP L P +++ SP + L P P+ P Q+P
Sbjct: 347 LSPLATPPPQAPPALA--LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 404
Query: 453 SGSPSQQRLSPQGQQPLSPQSGSPQQQ---------RSPGSPQLS--RASSGSSPNQASK 501
P Q SP P+SP + P Q + P SP S + S + P QA
Sbjct: 405 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 464
Query: 502 PGATLASQ-PRPPVQGRSTSQQGEESKKPAPP 532
P A Q +PP Q P+PP
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPPLQALPSPP 496
Score = 38.5 bits (88), Expect = 0.017
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 20/182 (10%)
Query: 408 RPWAPQIKSAKSP--GQAQLGPQL-GQPQ-PRPPPQGGPRQAQSPQPQRSGSPSQQR--- 460
RP + + S+ +P A+ GP G P+ P P Q P+ Q+ +P + P +
Sbjct: 227 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 286
Query: 461 LSPQGQQPL-SPQSGSPQQQRSPGSPQLSRASSGSSPNQASKP------GATLASQPRPP 513
L P PL +P +P +P S Q + + P+QA+ AT + P PP
Sbjct: 287 LGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPP 346
Query: 514 VQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPSEDEAKAETIRNLRKS 573
+ +T APP L Q+ + ++ S TPS A + L+
Sbjct: 347 LSPLAT------PPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAP 400
Query: 574 FA 575
F+
Sbjct: 401 FS 402
Score = 36.2 bits (82), Expect = 0.085
Identities = 48/177 (27%), Positives = 62/177 (35%), Gaps = 38/177 (21%)
Query: 391 SKMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQG------GPRQ 444
S + LPM P P P + P P L P+ RPP G GPR
Sbjct: 506 SPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR-RPPTPGPDTSVSGPRL 564
Query: 445 ----AQSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRS-------------PGSPQL 487
A P P S SPS P S + +P++ R P +L
Sbjct: 565 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 624
Query: 488 SRA-----SSGSSPNQASKPGATLASQPRPPVQGRSTSQ--------QGEESKKPAP 531
+ S G +P A + GA A P PP G ++ +G ES PAP
Sbjct: 625 AACHPAAWSRGPAPPLAFR-GAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAP 680
Score = 35.4 bits (80), Expect = 0.14
Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)
Query: 392 KMSQLPMPGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQ--PRPPPQGGPR-QAQSP 448
K ++ P + R + SP A+ G PRP P PR + P
Sbjct: 137 KATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGP 196
Query: 449 QPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLAS 508
+ S + P P +G Q+ P S LS SS + + ++ G +
Sbjct: 197 RKSVSSASEHSTTEPSPAARRRPSAGGGLQR--PASRSLS--SSATPLSSPARSGPSARG 252
Query: 509 QPRPPVQGRSTSQQGEESKKPAPPHPHLNKSQSLTNSLSTSDTSQRGTPS 558
PR P +G ++ +P P + LS+S + TPS
Sbjct: 253 TPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA---TPS 299
Score = 35.4 bits (80), Expect = 0.14
Identities = 36/149 (24%), Positives = 46/149 (30%), Gaps = 4/149 (2%)
Query: 399 PGGTAPSPLRPWAPQIKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQ 458
P A PL P A A + L P P PP Q SP S +P
Sbjct: 370 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 429
Query: 459 QR----LSPQGQQPLSPQSGSPQQQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPV 514
Q +P Q P SP + P + PQ + A P + PP+
Sbjct: 430 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPL 489
Query: 515 QGRSTSQQGEESKKPAPPHPHLNKSQSLT 543
Q + + P P L S T
Sbjct: 490 QALPSPPASFPGQAPFSPSASLPMSPLAT 518
Score = 35.0 bits (79), Expect = 0.19
Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 12/142 (8%)
Query: 422 QAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRL----SPQGQQPLSPQSGSPQ 477
+A+ G P R P PR SP+P +P+ R+ G++PL+ ++G
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAG--- 63
Query: 478 QQRSPGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAPPHPHLN 537
G + ++ + P + S+P A+ + PP + S + P
Sbjct: 64 ---GIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL 120
Query: 538 KSQSLTNSLSTSDTSQRGTPSE 559
+ L +S +T RG +E
Sbjct: 121 GQKGL--RISAEETVARGKATE 140
Score = 32.7 bits (73), Expect = 0.94
Identities = 35/125 (28%), Positives = 41/125 (32%), Gaps = 19/125 (15%)
Query: 397 PMPGGTAPSPLRPWAPQ-----------IKSAKSPGQAQLGPQLGQPQPRPPPQGGPRQA 445
P+ AP PW P I + P A P P P P GG A
Sbjct: 639 PLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAA 698
Query: 446 QSPQPQRSGSPSQQRLSPQGQQPLSPQSGSPQQQRSPGSPQLSRA-----SSGSSPNQAS 500
+ S SP Q RL G+ PL S Q + L+ A SG P A
Sbjct: 699 GAGAGASSRSPKQARL---GELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 755
Query: 501 KPGAT 505
G T
Sbjct: 756 GGGVT 760
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,111,376
Number of Sequences: 37866
Number of extensions: 1608577
Number of successful extensions: 21060
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 1914
Number of HSP's that attempted gapping in prelim test: 10745
Number of HSP's gapped (non-prelim): 8012
length of query: 580
length of database: 18,247,518
effective HSP length: 108
effective length of query: 472
effective length of database: 14,157,990
effective search space: 6682571280
effective search space used: 6682571280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.