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Search of human proteins with 208879446
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|208879446 proenkephalin [Homo sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|208879446 proenkephalin [Homo sapiens] 553 e-158
gi|5453876 proenkephalin [Homo sapiens] 553 e-158
gi|13270473 beta-neoendorphin-dynorphin preproprotein [Homo sapi... 91 1e-18
gi|5453922 prepronociceptin [Homo sapiens] 59 4e-09
gi|21735569 claspin [Homo sapiens] 36 0.031
gi|14550405 postreplication repair protein hRAD18p [Homo sapiens] 35 0.068
gi|170650672 Leber congenital amaurosis 5 [Homo sapiens] 33 0.26
gi|170650670 Leber congenital amaurosis 5 [Homo sapiens] 33 0.26
gi|153791492 eukaryotic translation initiation factor 3, subunit... 33 0.34
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 33 0.34
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 33 0.34
gi|83700233 eukaryotic translation initiation factor 3, subunit ... 33 0.34
gi|4503525 eukaryotic translation initiation factor 3, subunit C... 33 0.34
gi|212276078 leucine rich repeat (in FLII) interacting protein 1... 32 0.44
gi|33356547 minichromosome maintenance complex component 2 [Homo... 32 0.58
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens] 32 0.58
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 31 1.3
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 30 1.7
gi|169213941 PREDICTED: similar to mCG2980 [Homo sapiens] 30 1.7
gi|169214360 PREDICTED: similar to mCG2980 isoform 1 [Homo sapiens] 30 1.7
gi|169213374 PREDICTED: similar to mCG2980 isoform 1 [Homo sapiens] 30 1.7
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 30 1.7
gi|4505949 proopiomelanocortin preproprotein [Homo sapiens] 30 2.2
gi|80861463 proopiomelanocortin preproprotein [Homo sapiens] 30 2.2
gi|7661730 mitochondrial ribosomal protein S28 [Homo sapiens] 30 2.2
gi|4557565 excision repair cross-complementing rodent repair def... 30 2.9
gi|4557509 cylicin 2 [Homo sapiens] 29 3.8
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens] 29 3.8
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 29 3.8
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 29 3.8
>gi|208879446 proenkephalin [Homo sapiens]
Length = 267
Score = 553 bits (1425), Expect = e-158
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MARFLTLCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPADINFLACVMECEGKLPSLK 60
MARFLTLCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPADINFLACVMECEGKLPSLK
Sbjct: 1 MARFLTLCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPADINFLACVMECEGKLPSLK 60
Query: 61 IWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPM 120
IWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPM
Sbjct: 61 IWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPM 120
Query: 121 EPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEE 180
EPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEE
Sbjct: 121 EPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEE 180
Query: 181 EVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEA 240
EVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEA
Sbjct: 181 EVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEA 240
Query: 241 LPSDEEGESYSKEVPEMEKRYGGFMRF 267
LPSDEEGESYSKEVPEMEKRYGGFMRF
Sbjct: 241 LPSDEEGESYSKEVPEMEKRYGGFMRF 267
>gi|5453876 proenkephalin [Homo sapiens]
Length = 267
Score = 553 bits (1425), Expect = e-158
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MARFLTLCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPADINFLACVMECEGKLPSLK 60
MARFLTLCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPADINFLACVMECEGKLPSLK
Sbjct: 1 MARFLTLCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPADINFLACVMECEGKLPSLK 60
Query: 61 IWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPM 120
IWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPM
Sbjct: 61 IWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPM 120
Query: 121 EPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEE 180
EPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEE
Sbjct: 121 EPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEE 180
Query: 181 EVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEA 240
EVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEA
Sbjct: 181 EVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEA 240
Query: 241 LPSDEEGESYSKEVPEMEKRYGGFMRF 267
LPSDEEGESYSKEVPEMEKRYGGFMRF
Sbjct: 241 LPSDEEGESYSKEVPEMEKRYGGFMRF 267
>gi|13270473 beta-neoendorphin-dynorphin preproprotein [Homo
sapiens]
Length = 254
Score = 90.5 bits (223), Expect = 1e-18
Identities = 79/252 (31%), Positives = 120/252 (47%), Gaps = 29/252 (11%)
Query: 18 LLATVRAECSQDCATCSYRLVR-PADINFLACVMECEGKLPSLKIWETCKELLQLSKPEL 76
+ + A+C C+ C+ + P IN L C ++C+ L + WE C+ L P
Sbjct: 14 MFPSTTADCLSRCSLCAVKTQDGPKPINPLICSLQCQAALLPSEEWERCQSFLSFFTP-- 71
Query: 77 PQDGTSTLRENSKPE--ESHLLAKRYGGFMKRYGGFMKKMDE--LYPMEPEEEANGSEIL 132
STL N K + + Y K G F+K++++ P +E S+ L
Sbjct: 72 -----STLGLNDKEDLGSKSVGEGPYSELAKLSGSFLKELEKSKFLPSISTKENTLSKSL 126
Query: 133 AKRYGGFMKKDAEEDDS-LANSSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMR 191
++ G E +S L + L +ETG + + D +E+V KRYGGF+R
Sbjct: 127 EEKLRGLSDGFREGAESELMRDAQLNDGAMETG-----TLYLAEEDPKEQV-KRYGGFLR 180
Query: 192 GL-KRSPQLEDEA-------KELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKR-FAEALP 242
KRS ++ E ++L KRYGGF+RR+ RP+ D QKRYGGFL+R F
Sbjct: 181 KYPKRSSEVAGEGDGDSMGHEDLYKRYGGFLRRI-RPKLKWDNQKRYGGFLRRQFKVVTR 239
Query: 243 SDEEGESYSKEV 254
S E+ +YS E+
Sbjct: 240 SQEDPNAYSGEL 251
>gi|5453922 prepronociceptin [Homo sapiens]
Length = 176
Score = 58.9 bits (141), Expect = 4e-09
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 7 LCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPAD-INFLACVMECEGKLPSLKIWETC 65
LC LLL L ++V + C +DC TC +L D + C++ECE K+ +W C
Sbjct: 5 LCDLLLL---SLFSSVFSSCQRDCLTCQEKLHPALDSFDLEVCILECEEKVFPSPLWTPC 61
Query: 66 KELLQLS----KPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPME 121
+++ S P P+ + L + E HL M R ++ +E P
Sbjct: 62 TKVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRR------MPRVRSLFQEQEEPEPGM 115
Query: 122 PEEEANGSEILAKRYGGF--MKKDAEEDDSLANSSDLLKELL---ETGDNRERSHHQDGS 176
E + L KR+GGF +K A + + S+ +++ L R R+ HQ+G+
Sbjct: 116 EEAGEMEQKQLQKRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQNGN 175
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 36.2 bits (82), Expect = 0.031
Identities = 53/195 (27%), Positives = 76/195 (38%), Gaps = 31/195 (15%)
Query: 63 ETCKELLQLSKPELPQDGTSTLRE---NSKPEESHLLAKRYGGFMKRYGGFMKKMDELYP 119
E +ELL L + ST N + +ES + G F +E
Sbjct: 935 ENMEELLNLCSGKFTSQDASTPASSELNKQEKESSMGDPMEEALALCSGSFPTDKEE--- 991
Query: 120 MEPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNE 179
E EEE G L F D++ED+ + +DL E H+D D+E
Sbjct: 992 -EDEEEEFGDFRLVSNDNEF---DSDEDEHSDSGNDLALE-----------DHED--DDE 1034
Query: 180 EEVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAE 239
EE+ KR R ++ LEDEA+ G G E +Y++ E
Sbjct: 1035 EELLKRSEKLKRQMRLRKYLEDEAEVSGSDVGSEDEYDG--EEIDEYEEDV------IDE 1086
Query: 240 ALPSDEEGESYSKEV 254
LPSDEE +S K++
Sbjct: 1087 VLPSDEELQSQIKKI 1101
>gi|14550405 postreplication repair protein hRAD18p [Homo sapiens]
Length = 495
Score = 35.0 bits (79), Expect = 0.068
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 113 KMDELYPMEPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHH 172
K+D +EP+ E + S + + + +E D ++SSD++++LLE + E SH
Sbjct: 406 KLDSPEELEPDREEDSSSCIDIQE---VLSSSESDSCNSSSSDIIRDLLEEEEAWEASHK 462
Query: 173 QDGSDNE 179
D D E
Sbjct: 463 NDLQDTE 469
>gi|170650672 Leber congenital amaurosis 5 [Homo sapiens]
Length = 697
Score = 33.1 bits (74), Expect = 0.26
Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 6/191 (3%)
Query: 59 LKIWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELY 118
+K+ E KE L + + Q+ E+++ E S L+ + K ++
Sbjct: 124 VKLAELLKENKSLKRLQYRQEKALNKFEDAENEISQLIFRHNNEITALKERLRKSQEKER 183
Query: 119 PMEPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETG---DNRERSHHQDG 175
E + SE+ ++ K+ E L DL K+L+ D+ ER +
Sbjct: 184 ATEKRVKDTESELFRTKFSLQKLKEISEARHLPERDDLAKKLVSAELKLDDTERRIKELS 243
Query: 176 SDNEEEVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLK 235
+ E + + KR+ + DE K LQK ++ E +D + Y
Sbjct: 244 KNLELSTNSFQRQLLAERKRAYEAHDENKVLQKEVQRLYHKLKEKERELDIKNIYS---N 300
Query: 236 RFAEALPSDEE 246
R ++ P+ E+
Sbjct: 301 RLPKSSPNKEK 311
>gi|170650670 Leber congenital amaurosis 5 [Homo sapiens]
Length = 697
Score = 33.1 bits (74), Expect = 0.26
Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 6/191 (3%)
Query: 59 LKIWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELY 118
+K+ E KE L + + Q+ E+++ E S L+ + K ++
Sbjct: 124 VKLAELLKENKSLKRLQYRQEKALNKFEDAENEISQLIFRHNNEITALKERLRKSQEKER 183
Query: 119 PMEPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETG---DNRERSHHQDG 175
E + SE+ ++ K+ E L DL K+L+ D+ ER +
Sbjct: 184 ATEKRVKDTESELFRTKFSLQKLKEISEARHLPERDDLAKKLVSAELKLDDTERRIKELS 243
Query: 176 SDNEEEVSKRYGGFMRGLKRSPQLEDEAKELQKRYGGFMRRVGRPEWWMDYQKRYGGFLK 235
+ E + + KR+ + DE K LQK ++ E +D + Y
Sbjct: 244 KNLELSTNSFQRQLLAERKRAYEAHDENKVLQKEVQRLYHKLKEKERELDIKNIYS---N 300
Query: 236 RFAEALPSDEE 246
R ++ P+ E+
Sbjct: 301 RLPKSSPNKEK 311
>gi|153791492 eukaryotic translation initiation factor 3, subunit
C-like [Homo sapiens]
Length = 914
Score = 32.7 bits (73), Expect = 0.34
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 139 FMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQ 198
F+KK +ED+ +S D E +TG SD+EEE K+ R LK++P
Sbjct: 211 FLKKMDDEDEDSEDSED--DEDWDTGST------SSDSDSEEEEGKQTALASRFLKKAPT 262
Query: 199 LEDEAKELQKR 209
+++ K +K+
Sbjct: 263 TDEDKKAAEKK 273
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 32.7 bits (73), Expect = 0.34
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 157 LKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQLEDEAKELQKR 209
LKE L+T NRE S + +D E+ K+ + + L+ +++ E EL+++
Sbjct: 1801 LKEALKTSKNRENSLTDNLNDLNNELQKKQKAYNKILREKEEIDQENDELKRQ 1853
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 32.7 bits (73), Expect = 0.34
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 10/119 (8%)
Query: 91 EESHLLAKRYGGFMKRYGGFMKKMDELYPMEPEEEANGSEILAKRYGGFMKKDAEEDDSL 150
E H R KR K+ + E +E++N R G + D+ E
Sbjct: 432 ERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRS----RSGSQGRTDSVEKSKK 487
Query: 151 ANSSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQLEDEAKELQKR 209
S ++ + ++ERSH +D SD++++ K +RS +E E++E Q +
Sbjct: 488 REHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDK------HDRRRSQSIEQESQEKQHK 540
>gi|83700233 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 32.7 bits (73), Expect = 0.34
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 139 FMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQ 198
F+KK +ED+ +S D E +TG SD+EEE K+ R LK++P
Sbjct: 211 FLKKMDDEDEDSEDSED--DEDWDTGST------SSDSDSEEEEGKQTALASRFLKKAPT 262
Query: 199 LEDEAKELQKR 209
+++ K +K+
Sbjct: 263 TDEDKKAAEKK 273
>gi|4503525 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 32.7 bits (73), Expect = 0.34
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 139 FMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQ 198
F+KK +ED+ +S D E +TG SD+EEE K+ R LK++P
Sbjct: 211 FLKKMDDEDEDSEDSED--DEDWDTGST------SSDSDSEEEEGKQTALASRFLKKAPT 262
Query: 199 LEDEAKELQKR 209
+++ K +K+
Sbjct: 263 TDEDKKAAEKK 273
>gi|212276078 leucine rich repeat (in FLII) interacting protein 1
isoform 1 [Homo sapiens]
Length = 640
Score = 32.3 bits (72), Expect = 0.44
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 195 RSPQLEDEAKEL---QKRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEALPSDEE----G 247
R +LE + KE+ QK+Y G + G E WM+ +RY +R A DE
Sbjct: 51 RMKELERQQKEIYQVQKKYYGLDTKWGDIEQWMEDSERYSRRSRRNTSASDEDERMSVGS 110
Query: 248 ESYSKEVPEMEKRYGG 263
+ P++E YGG
Sbjct: 111 RGSLRSQPDLE--YGG 124
>gi|33356547 minichromosome maintenance complex component 2 [Homo
sapiens]
Length = 904
Score = 32.0 bits (71), Expect = 0.58
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 123 EEEANGSEILA----KRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDN 178
EEE +G E++ + Y + DA E + LA + ++EL T RE +
Sbjct: 64 EEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEEL--TASQREAAERAM-RQR 120
Query: 179 EEEVSKRYGGFMRGLKRSPQLEDEAKELQKR 209
+ E + G RGL EDE + +KR
Sbjct: 121 DREAGRGLGRMRRGLLYDSDEEDEERPARKR 151
>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
Length = 857
Score = 32.0 bits (71), Expect = 0.58
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 60 KIWETCKELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYP 119
K+ + KE+ L + P+ +E KP+ ++ + G MK +M
Sbjct: 220 KLDQDWKEIQTLLSHKTPKSENRDKKEKPKPDAYDMMVRELGFEMKAQPS--NRMKTEAE 277
Query: 120 MEPEEEANGSEILAKRYGGFMKKDAEED---DSLANSSDLLKELLETGDNRERSHHQDGS 176
+ EE+ + ++ A+R + KD +E+ ++ DL + D+R ++DG
Sbjct: 278 LAKEEQEHLRKLEAERLRRMLGKDEDENVKKPKHMSADDLNDGFVLDKDDRRLLSYKDGK 337
Query: 177 DNEEE 181
N EE
Sbjct: 338 MNVEE 342
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 30.8 bits (68), Expect = 1.3
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 67 ELLQLSKPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPMEPEE-- 124
E LQ+ K + Q LRE + E+ LL + F +K E ++ E
Sbjct: 629 EKLQVLKQQY-QTEMEKLREKCEQEKETLLKDKEIIFQAHIEEMNEKTLEKLDVKQTELE 687
Query: 125 --EANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDN---E 179
+ SE+L R+ K EE L + +D +K+ LE + +++HHQ D+ E
Sbjct: 688 SLSSELSEVLKARH-----KLEEELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKE 742
Query: 180 EEVS 183
EVS
Sbjct: 743 HEVS 746
Score = 30.0 bits (66), Expect = 2.2
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 123 EEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEV 182
E EA E + +KK AE+DD L ++ +E+L+ + + +D EE+
Sbjct: 2025 EVEAELLESHQEETNQLLKKIAEKDDDLKRTAKRYEEILDAREEEMTAKVRDLQTQLEEL 2084
Query: 183 SKRY 186
K+Y
Sbjct: 2085 QKKY 2088
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 30.4 bits (67), Expect = 1.7
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 24/126 (19%)
Query: 103 FMKRYGGFMKKMDELYPMEPEEEA----NGSEILAKRYGGFMKK------DAEEDDSLAN 152
F KR G MKK EL + E A N S L + M K + E
Sbjct: 21 FTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRT 80
Query: 153 SSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQLEDEAKELQKRYGG 212
++D+++ L + G N S DG D+ L++SP LED+ + + G
Sbjct: 81 NADIIETLRKKGFNGCDSPEPDGEDS--------------LEQSPLLEDKYRRASEELDG 126
Query: 213 FMRRVG 218
RR G
Sbjct: 127 LFRRYG 132
>gi|169213941 PREDICTED: similar to mCG2980 [Homo sapiens]
Length = 307
Score = 30.4 bits (67), Expect = 1.7
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 91 EESHLLAKRYGGFMKRYGGFMKKMDELYPMEPEEEA---NGSEIL--AKRYGGFMKKDAE 145
EE LL G F K+ G M+ E+ E EE A + SE+ A R G + E
Sbjct: 118 EEKGLLL---GDFKKQEAGKMRSSQEVRDEEEEEVAERTHKSEVQEQAIRMQGHRQLHQE 174
Query: 146 EDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQLEDEAKE 205
ED+ + + +ET ++ + H ++G D ++ V+++ K + Q + E K
Sbjct: 175 EDEE-EEKEERKRGPMETFEDLWQRHLENGGDLQKRVAEKASD-----KETAQFQAEEKG 228
Query: 206 LQ-----------KRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEALPSDEEGESYSKEV 254
++ GG RR P + + EA P E+ E+ +E
Sbjct: 229 VRVLGGDRSLWQGAERGGGERREDLPHHHHHHHQ---------PEAEPRQEKEEASEREE 279
Query: 255 PEMEK 259
E+E+
Sbjct: 280 KEVEQ 284
>gi|169214360 PREDICTED: similar to mCG2980 isoform 1 [Homo sapiens]
Length = 307
Score = 30.4 bits (67), Expect = 1.7
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 91 EESHLLAKRYGGFMKRYGGFMKKMDELYPMEPEEEA---NGSEIL--AKRYGGFMKKDAE 145
EE LL G F K+ G M+ E+ E EE A + SE+ A R G + E
Sbjct: 118 EEKGLLL---GDFKKQEAGKMRSSQEVRDEEEEEVAERTHKSEVQEQAIRMQGHRQLHQE 174
Query: 146 EDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQLEDEAKE 205
ED+ + + +ET ++ + H ++G D ++ V+++ K + Q + E K
Sbjct: 175 EDEE-EEKEERKRGPMETFEDLWQRHLENGGDLQKRVAEKASD-----KETAQFQAEEKG 228
Query: 206 LQ-----------KRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEALPSDEEGESYSKEV 254
++ GG RR P + + EA P E+ E+ +E
Sbjct: 229 VRVLGGDRSLWQGAERGGGERREDLPHHHHHHHQ---------PEAEPRQEKEEASEREE 279
Query: 255 PEMEK 259
E+E+
Sbjct: 280 KEVEQ 284
>gi|169213374 PREDICTED: similar to mCG2980 isoform 1 [Homo sapiens]
Length = 307
Score = 30.4 bits (67), Expect = 1.7
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 34/185 (18%)
Query: 91 EESHLLAKRYGGFMKRYGGFMKKMDELYPMEPEEEA---NGSEIL--AKRYGGFMKKDAE 145
EE LL G F K+ G M+ E+ E EE A + SE+ A R G + E
Sbjct: 118 EEKGLLL---GDFKKQEAGKMRSSQEVRDEEEEEVAERTHKSEVQEQAIRMQGHRQLHQE 174
Query: 146 EDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEVSKRYGGFMRGLKRSPQLEDEAKE 205
ED+ + + +ET ++ + H ++G D ++ V+++ K + Q + E K
Sbjct: 175 EDEE-EEKEERKRGPMETFEDLWQRHLENGGDLQKRVAEKASD-----KETAQFQAEEKG 228
Query: 206 LQ-----------KRYGGFMRRVGRPEWWMDYQKRYGGFLKRFAEALPSDEEGESYSKEV 254
++ GG RR P + + EA P E+ E+ +E
Sbjct: 229 VRVLGGDRSLWQGAERGGGERREDLPHHHHHHHQ---------PEAEPRQEKEEASEREE 279
Query: 255 PEMEK 259
E+E+
Sbjct: 280 KEVEQ 284
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 30.4 bits (67), Expect = 1.7
Identities = 52/198 (26%), Positives = 74/198 (37%), Gaps = 31/198 (15%)
Query: 14 LGPGLLATVRAECSQDCATCSYRLVRPADINFLACVMECEGKLPSLKIWETCKELLQLSK 73
+ PG LA + A C C S L D+ + +E K K +E+ QL
Sbjct: 1841 MSPGALAIIFAPCLLRCPDNSDPLTSMKDVLKITTCVEMLIKEQMRKYKVKMEEISQLEA 1900
Query: 74 PE-LPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKM--------DELYPMEPEE 124
E + S LR+N+ P L GF Y G + K +EL + EE
Sbjct: 1901 AESIAFRRLSLLRQNA-PWPLKL------GFSSPYEGVLNKSPKTRDIQEEELEVLLEEE 1953
Query: 125 EANG-----SEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNE 179
A G EIL +R K+ +ED + L EL G + E + + E
Sbjct: 1954 AAGGDEDREKEILIERIQSI--KEEKEDITYR-----LPELDPRGSDEENLDSETSASTE 2006
Query: 180 EEVSKRYGGFMRGLKRSP 197
+ +R G RG P
Sbjct: 2007 SLLEERAG---RGASEGP 2021
>gi|4505949 proopiomelanocortin preproprotein [Homo sapiens]
Length = 267
Score = 30.0 bits (66), Expect = 2.2
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 116 ELYPMEPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERS----- 170
E +P+E + E G + R G D DD +DL LL + ++
Sbjct: 170 EAFPLEFKRELTGQRL---REGD--GPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRME 224
Query: 171 HHQDGSDNEEEVSKRYGGFMRGLKRSPQL 199
H + GS ++ KRYGGFM K L
Sbjct: 225 HFRWGSPPKD---KRYGGFMTSEKSQTPL 250
>gi|80861463 proopiomelanocortin preproprotein [Homo sapiens]
Length = 267
Score = 30.0 bits (66), Expect = 2.2
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%)
Query: 116 ELYPMEPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERS----- 170
E +P+E + E G + R G D DD +DL LL + ++
Sbjct: 170 EAFPLEFKRELTGQRL---REGD--GPDGPADDGAGAQADLEHSLLVAAEKKDEGPYRME 224
Query: 171 HHQDGSDNEEEVSKRYGGFMRGLKRSPQL 199
H + GS ++ KRYGGFM K L
Sbjct: 225 HFRWGSPPKD---KRYGGFMTSEKSQTPL 250
>gi|7661730 mitochondrial ribosomal protein S28 [Homo sapiens]
Length = 187
Score = 30.0 bits (66), Expect = 2.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 170 SHHQDGSDNEEEVSKRYGGFMRGLKRSPQLEDEAKELQK 208
S + GS N +E R GGF L+R +L + + LQK
Sbjct: 33 SGSESGSSNAKEPKTRAGGFASALERHSELLQKVEPLQK 71
>gi|4557565 excision repair cross-complementing rodent repair
deficiency, complementation group 6 [Homo sapiens]
Length = 1493
Score = 29.6 bits (65), Expect = 2.9
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 194 KRSPQLEDEAKELQKRYGGFMRRVGRPE----WWMDYQKRYGGFLK-RFAEALPSDEEGE 248
K+ +L+ K+LQKR F +VG P+ W D + G + +E P++EE E
Sbjct: 323 KKEERLKKHIKKLQKRALQFQGKVGLPKARRPWESDMRPEAEGDSEGEESEYFPTEEEEE 382
Query: 249 SYSKEVPEMEKRYGG 263
EV E G
Sbjct: 383 EEDDEVEGAEADLSG 397
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 29.3 bits (64), Expect = 3.8
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 124 EEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEVS 183
E+ ++ AK+ KKDAE+ A S+ K + + +++ G D+ E
Sbjct: 148 EKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKGKDSATESE 207
Query: 184 KRYGG----FMRGLKRSPQLEDEAKELQ 207
GG +G K S + +D A ELQ
Sbjct: 208 GEKGGTEKDSKKGKKDSKKGKDSAIELQ 235
>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
Length = 4967
Score = 29.3 bits (64), Expect = 3.8
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 18/122 (14%)
Query: 76 LPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPMEPEEEANGSEILA-- 133
LP + + L+E + EES LL+ +G +KR GG K L P P A S++++
Sbjct: 4358 LPSEDLTDLKELT--EESDLLSDIFGLDLKREGGQYK----LIPHNP--NAGLSDLMSNP 4409
Query: 134 -------KRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNEEEV-SKR 185
+++ K+ E+++ S+ K E G+ E++ G ++ + R
Sbjct: 4410 VPMPEVQEKFQEQKAKEEEKEEKEETKSEPEKAEGEDGEKEEKAKEDKGKQKLRQLHTHR 4469
Query: 186 YG 187
YG
Sbjct: 4470 YG 4471
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 29.3 bits (64), Expect = 3.8
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 109 GFMKKMDELYPMEPEEEANGSEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRE 168
G+++ +D+ E EEE + + + D E++D + E + + +
Sbjct: 162 GYVEGLDDEEEDEDEEEYDEDAQVVE--------DEEDEDEEEEGEE---EDVSGEEEED 210
Query: 169 RSHHQDGSDNEEEVSKRYGGFMRGLKRSPQLEDEAKE 205
+ DG ++EE + G RG KR + EDE ++
Sbjct: 211 EEGYNDGEVDDEEDEEELGEEERGQKRKREPEDEGED 247
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 29.3 bits (64), Expect = 3.8
Identities = 49/188 (26%), Positives = 71/188 (37%), Gaps = 28/188 (14%)
Query: 14 LGPGLLATVRAECSQDCATCSYRLVRPADINFLACVMECEGKLPSLKIWETCKELLQLSK 73
+ PG LA + A C C S L D+ + +E K K +E+ QL
Sbjct: 1841 MSPGALAIIFAPCLLRCPDNSDPLTSMKDVLKITTCVEMLIKEQMRKYKVKMEEISQLEA 1900
Query: 74 PE-LPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKM--------DELYPMEPEE 124
E + S LR+N+ P L GF Y G + K +EL + EE
Sbjct: 1901 AESIAFRRLSLLRQNA-PWPLKL------GFSSPYEGVLNKSPKTRDIQEEELEVLLEEE 1953
Query: 125 EANG-----SEILAKRYGGFMKKDAEEDDSLANSSDLLKELLETGDNRERSHHQDGSDNE 179
A G EIL +R K+ +ED + L EL G + E + + E
Sbjct: 1954 AAGGDEDREKEILIERIQSI--KEEKEDITYR-----LPELDPRGSDEENLDSETSASTE 2006
Query: 180 EEVSKRYG 187
+ +R G
Sbjct: 2007 SLLEERAG 2014
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,547,801
Number of Sequences: 37866
Number of extensions: 568666
Number of successful extensions: 2169
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 2022
Number of HSP's gapped (non-prelim): 108
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.