LOC643669 8978

Name: LOC643669	Sequence: fasta or formatted (307aa)		NCBI GI: 169214360
Description: PREDICTED: similar to mCG2980 isoform 1		Not currently referenced in the text
Other entries for this name: alt mRNA {307aa} PREDICTED: similar to mCG2980 isoform 1 alt mRNA {307aa} PREDICTED: similar to mCG2980
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 24 2 C cysteine 2.0 6 1 D aspartate 3.6 11 1 E glutamate 18.6 57 5 F phenylalanine 1.0 3 1 G glycine 10.4 32 3 H histidine 4.6 14 7 I isoleucine 0.3 1 1 K lysine 5.5 17 2 L leucine 10.4 32 4 M methionine 1.3 4 1 N asparagine 0.3 1 1 P proline 5.2 16 2 Q glutamine 6.2 19 1 R arginine 8.8 27 2 S serine 3.9 12 2 T threonine 4.6 14 2 V valine 4.6 14 2 W tryptophan 1.0 3 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to mCG2980 isoform 1 LOC643669 1.000 PREDICTED: similar to mCG2980 LOC643669 1.000 PREDICTED: similar to mCG2980 isoform 1 LOC283685 0.058 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC645202 0.058 PREDICTED: hypothetical protein LOC645202 LOC100133758 0.057 PREDICTED: hypothetical protein, partial LOC283685 0.057 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC651807 0.057 PREDICTED: hypothetical protein LOC440243 0.053 PREDICTED: Putative golgin subfamily A member 6-lik... LOC283767 0.052 golgi autoantigen, golgin subfamily a-like LOC727832 0.052 golgi autoantigen, golgin subfamily a-like TCHH 0.050 trichohyalin LOC400352 0.050 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.050 PREDICTED: similar to Putative golgin subfamily A m... RPGR 0.045 retinitis pigmentosa GTPase regulator isoform C [Hom... NEFM 0.043 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.043 neurofilament, medium polypeptide 150kDa isoform 2 ... LOC100133599 0.042 PREDICTED: hypothetical protein ACIN1 0.042 apoptotic chromatin condensation inducer 1 LOC100288837 0.042 PREDICTED: hypothetical protein XP_002343931, parti... CCDC11 0.040 coiled-coil domain containing 11 BAT2D1 0.038 HBxAg transactivated protein 2 LOC100130174 0.038 PREDICTED: hypothetical protein LOC100130174 0.038 PREDICTED: hypothetical protein LOC100130174 0.038 PREDICTED: hypothetical protein USP35 0.038 ubiquitin specific protease 35 DCTN1 0.037 dynactin 1 isoform 4 DCTN1 0.037 dynactin 1 isoform 3 DCTN1 0.037 dynactin 1 isoform 2 DCTN1 0.037 dynactin 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.