Guide to the Human Genome
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Name: PENK Sequence: fasta or formatted (267aa) NCBI GI: 5453876
Description:

proenkephalin

Referenced in:

Hypothalamus
Peptide and Protein G-coupled Signals

Other entries for this name:
alt mRNA [267aa] proenkephalin
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         14           1
 C cysteine            2.6          7           1
 D aspartate           5.2         14           2
 E glutamate          12.7         34           3
 F phenylalanine       4.1         11           1
 G glycine             9.0         24           2
 H histidine           1.1          3           2
 I isoleucine          1.1          3           1
 K lysine              7.9         21           2
 L leucine            11.6         31           4
 M methionine          4.5         12           1
 N asparagine          2.2          6           1
 P proline             4.5         12           1
 Q glutamine           2.6          7           1
 R arginine            7.9         21           2
 S serine              6.7         18           2
 T threonine           3.0          8           1
 V valine              2.2          6           1
 W tryptophan          1.5          4           2
 Y tyrosine            4.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proenkephalin 
PENK                  1.000   proenkephalin 
PDYN                  0.125   beta-neoendorphin-dynorphin preproprotein 
PNOC                  0.064   prepronociceptin 
CLSPN                 0.021   claspin 
RAD18                 0.019   postreplication repair protein hRAD18p 
LCA5                  0.015   Leber congenital amaurosis 5 
LCA5                  0.015   Leber congenital amaurosis 5 
EIF3CL                0.015   eukaryotic translation initiation factor 3, subunit...
CEP290                0.015   centrosomal protein 290kDa 
PRPF38B               0.015   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
EIF3C                 0.015   eukaryotic translation initiation factor 3, subunit ...
EIF3C                 0.015   eukaryotic translation initiation factor 3, subunit C...
LRRFIP1               0.013   leucine rich repeat (in FLII) interacting protein 1...
MCM2                  0.013   minichromosome maintenance complex component 2 [Homo...
NOP14                 0.013   probable nucleolar complex protein 14 
GOLGA4                0.011   golgi autoantigen, golgin subfamily a, 4 
MEF2D                 0.009   myocyte enhancer factor 2D 
LOC643669             0.009   PREDICTED: similar to mCG2980 
LOC643669             0.009   PREDICTED: similar to mCG2980 isoform 1 
LOC643669             0.009   PREDICTED: similar to mCG2980 isoform 1 
MYO9B                 0.009   myosin IXB isoform 1 
POMC                  0.009   proopiomelanocortin preproprotein 
POMC                  0.009   proopiomelanocortin preproprotein 
MRPS28                0.009   mitochondrial ribosomal protein S28 
ERCC6                 0.009   excision repair cross-complementing rodent repair def...
CYLC2                 0.008   cylicin 2 
RYR2                  0.008   cardiac muscle ryanodine receptor 
ANP32A                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
MYO9B                 0.008   myosin IXB isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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