ATL2 12280

Name: ATL2	Sequence: fasta or formatted (579aa)		NCBI GI: 208610000
Description: atlastin GTPase 2 isoform 1		Referenced in: ADP-Ribosylation Factors
Other entries for this name: alt prot [583aa] atlastin GTPase 2 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 39 2 C cysteine 1.9 11 1 D aspartate 5.5 32 3 E glutamate 7.9 46 2 F phenylalanine 4.8 28 1 G glycine 6.0 35 2 H histidine 2.6 15 1 I isoleucine 5.0 29 2 K lysine 5.9 34 3 L leucine 10.0 58 3 M methionine 2.6 15 1 N asparagine 5.2 30 3 P proline 3.1 18 1 Q glutamine 5.5 32 2 R arginine 5.5 32 4 S serine 5.9 34 2 T threonine 4.7 27 2 V valine 6.4 37 3 W tryptophan 1.2 7 1 Y tyrosine 3.5 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 atlastin GTPase 2 isoform 1 ATL2 0.946 atlastin GTPase 2 isoform 2 ATL1 0.651 atlastin GTPase 1 isoform b ATL1 0.651 atlastin GTPase 1 isoform b ATL1 0.645 atlastin GTPase 1 isoform a ATL3 0.593 atlastin 3 RNF112 0.053 ring finger protein 112 GBP4 0.043 guanylate binding protein 4 GBP7 0.042 guanylate binding protein 4-like GBP5 0.041 guanylate-binding protein 5 GBP5 0.041 guanylate-binding protein 5 GBP3 0.039 guanylate binding protein 3 GBP2 0.038 guanylate binding protein 2, interferon-inducible [H... GBP6 0.037 guanylate binding protein family, member 6 GBP1 0.033 guanylate binding protein 1, interferon-inducible, ... GRIPAP1 0.010 GRIP1 associated protein 1 isoform 2 SEPT4 0.006 septin 4 isoform 1 SEPT4 0.006 septin 4 isoform 3 ATP1A3 0.006 Na+/K+ -ATPase alpha 3 subunit ABCC11 0.005 ATP-binding cassette, sub-family C, member 11 isofor... ABCC11 0.005 ATP-binding cassette, sub-family C, member 11 isofor... ABCC11 0.005 ATP-binding cassette, sub-family C, member 11 isofor... MTMR7 0.004 myotubularin related protein 7 TIAM2 0.004 T-cell lymphoma invasion and metastasis 2 isoform a ... PDC 0.004 phosducin isoform a PDC 0.004 phosducin isoform b SMG6 0.004 Smg-6 homolog, nonsense mediated mRNA decay factor ... TNPO1 0.004 transportin 1 isoform 2 TNPO1 0.004 transportin 1 isoform 1 RABGAP1 0.004 RAB GTPase activating protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.