Guide to the Human Genome
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Name: ATP1A3 Sequence: fasta or formatted (1013aa) NCBI GI: 22748667
Description:

Na+/K+ -ATPase alpha 3 subunit

Referenced in:

Sodium, Potassium, and Calcium Membrane ATPases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         76           2
 C cysteine            2.5         25           1
 D aspartate           6.1         62           2
 E glutamate           6.4         65           2
 F phenylalanine       4.4         45           2
 G glycine             7.5         76           2
 H histidine           1.5         15           1
 I isoleucine          7.8         79           2
 K lysine              5.6         57           2
 L leucine             9.0         91           2
 M methionine          2.6         26           1
 N asparagine          4.2         43           1
 P proline             4.1         42           3
 Q glutamine           3.6         36           2
 R arginine            4.3         44           2
 S serine              5.5         56           2
 T threonine           6.3         64           2
 V valine              7.6         77           3
 W tryptophan          1.1         11           2
 Y tyrosine            2.3         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Na+/K+ -ATPase alpha 3 subunit 
ATP1A1                0.879   Na+/K+ -ATPase alpha 1 subunit isoform c 
ATP1A2                0.879   Na+/K+ -ATPase alpha 2 subunit proprotein 
ATP1A1                0.879   Na+/K+ -ATPase alpha 1 subunit isoform a 
ATP1A1                0.873   Na+/K+ -ATPase alpha 1 subunit isoform d 
ATP1A4                0.781   Na+/K+ -ATPase alpha 4 subunit isoform 1 
ATP4A                 0.656   hydrogen/potassium-exchanging ATPase 4A 
ATP12A                0.651   hydrogen/potassium-exchanging ATPase 12A 
ATP2C1                0.175   calcium-transporting ATPase 2C1 isoform 1b 
ATP2C1                0.175   calcium-transporting ATPase 2C1 isoform 1d 
ATP2C1                0.175   calcium-transporting ATPase 2C1 isoform 1c 
ATP2C1                0.175   calcium-transporting ATPase 2C1 isoform 1a 
ATP2A3                0.174   ATPase, Ca++ transporting, ubiquitous isoform a [Hom...
ATP2A3                0.174   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.174   ATPase, Ca++ transporting, ubiquitous isoform f [Hom...
ATP2A3                0.174   ATPase, Ca++ transporting, ubiquitous isoform c [Hom...
ATP2A3                0.174   ATPase, Ca++ transporting, ubiquitous isoform b [Hom...
ATP2A3                0.174   ATPase, Ca++ transporting, ubiquitous isoform d [Hom...
ATP2A3                0.174   ATPase, Ca++ transporting, ubiquitous isoform e [Hom...
ATP2A2                0.169   ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H...
ATP2A2                0.169   ATPase, Ca++ transporting, slow twitch 2 isoform 1 [...
ATP2A1                0.166   ATPase, Ca++ transporting, fast twitch 1 isoform b [...
ATP2A1                0.166   ATPase, Ca++ transporting, fast twitch 1 isoform a [...
ATP2C2                0.159   ATPase, Ca++ transporting, type 2C, member 2 
ATP2A2                0.154   ATPase, Ca++ transporting, slow twitch 2 isoform 3 ...
ATP1A4                0.131   Na+/K+ -ATPase alpha 4 subunit isoform 2 
ATP2B2                0.123   plasma membrane calcium ATPase 2 isoform 2 
ATP2B3                0.121   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.121   plasma membrane calcium ATPase 3 isoform 3a 
ATP2B1                0.102   plasma membrane calcium ATPase 1 isoform 1a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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