PDC 26016

Name: PDC	Sequence: fasta or formatted (246aa)		NCBI GI: 32967591
Description: phosducin isoform a		Referenced in: Photoreceptors and Related Functions
Other entries for this name: alt prot [194aa] phosducin isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 10 2 C cysteine 2.0 5 1 D aspartate 5.3 13 1 E glutamate 13.4 33 3 F phenylalanine 4.9 12 2 G glycine 6.1 15 2 H histidine 2.4 6 1 I isoleucine 6.5 16 1 K lysine 8.9 22 2 L leucine 8.5 21 2 M methionine 2.0 5 1 N asparagine 2.8 7 1 P proline 3.3 8 2 Q glutamine 4.5 11 1 R arginine 4.5 11 2 S serine 8.1 20 2 T threonine 4.1 10 2 V valine 4.9 12 2 W tryptophan 0.4 1 1 Y tyrosine 3.3 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 phosducin isoform a PDC 0.779 phosducin isoform b PDCL 0.426 phosducin-like PDCL3 0.083 phosducin-like 3 PDCL2 0.081 phosducin-like 2 GLRX3 0.030 glutaredoxin 3 TXNDC9 0.028 thioredoxin domain containing 9 ESCO1 0.023 establishment of cohesion 1 homolog 1 MYH10 0.021 myosin, heavy polypeptide 10, non-muscle C10orf96 0.015 hypothetical protein LOC374355 C1orf226 0.013 hypothetical protein LOC400793 isoform 2 C1orf226 0.013 hypothetical protein LOC400793 isoform 1 ZRSR2 0.013 U2 small nuclear RNA auxiliary factor 1-like 2 SCN5A 0.013 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.013 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.013 voltage-gated sodium channel type V alpha isoform c... LOC100294386 0.013 PREDICTED: similar to sodium channel, voltage-gated... TCHH 0.011 trichohyalin CCDC74A 0.011 coiled-coil domain containing 74A WDR67 0.011 WD repeat domain 67 isoform 1 WDR67 0.011 WD repeat domain 67 isoform 2 ZBED4 0.011 zinc finger, BED-type containing 4 ATL2 0.011 atlastin GTPase 2 isoform 2 ATL2 0.011 atlastin GTPase 2 isoform 1 CCDC86 0.009 coiled-coil domain containing 86 CDC2L5 0.009 cell division cycle 2-like 5 isoform 1 CDC2L5 0.009 cell division cycle 2-like 5 isoform 2 CCDC74B 0.009 coiled-coil domain containing 74B TXN2 0.006 thioredoxin 2 precursor TERF2 0.006 telomeric repeat binding factor 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.