GBP1 6916

Name: GBP1	Sequence: fasta or formatted (592aa)		NCBI GI: 166706903
Description: guanylate binding protein 1, interferon-inducible, 67kDa		Referenced in: Interferon Additional Guanine Nucleotide-binding Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 35 2 C cysteine 1.5 9 1 D aspartate 5.2 31 2 E glutamate 9.6 57 3 F phenylalanine 3.9 23 2 G glycine 4.2 25 2 H histidine 1.7 10 1 I isoleucine 4.7 28 1 K lysine 9.1 54 3 L leucine 11.1 66 2 M methionine 3.0 18 2 N asparagine 3.4 20 1 P proline 3.4 20 1 Q glutamine 7.8 46 2 R arginine 4.6 27 3 S serine 6.9 41 2 T threonine 5.1 30 1 V valine 5.4 32 3 W tryptophan 0.7 4 1 Y tyrosine 2.7 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 guanylate binding protein 1, interferon-inducible, ... GBP3 0.873 guanylate binding protein 3 GBP2 0.779 guanylate binding protein 2, interferon-inducible [H... GBP5 0.656 guanylate-binding protein 5 GBP5 0.656 guanylate-binding protein 5 GBP7 0.546 guanylate binding protein 4-like GBP4 0.545 guanylate binding protein 4 GBP6 0.527 guanylate binding protein family, member 6 ATL3 0.044 atlastin 3 LOC729933 0.039 PREDICTED: similar to guanylate-binding protein 5 [... ATL1 0.036 atlastin GTPase 1 isoform b ATL1 0.036 atlastin GTPase 1 isoform b ATL1 0.036 atlastin GTPase 1 isoform a ATL2 0.033 atlastin GTPase 2 isoform 2 ATL2 0.033 atlastin GTPase 2 isoform 1 LOC645202 0.032 PREDICTED: hypothetical protein LOC645202 TCERG1 0.026 transcription elongation regulator 1 isoform 2 [Homo... TCERG1 0.026 transcription elongation regulator 1 isoform 1 [Homo... GOLGA4 0.025 golgi autoantigen, golgin subfamily a, 4 INCENP 0.025 inner centromere protein antigens 135/155kDa isofor... INCENP 0.025 inner centromere protein antigens 135/155kDa isofor... LOC440243 0.025 PREDICTED: Putative golgin subfamily A member 6-lik... KTN1 0.025 kinectin 1 isoform b CLIP1 0.025 restin isoform b CLIP1 0.025 restin isoform a CEP110 0.025 centrosomal protein 110kDa CAGE1 0.024 cancer antigen 1 KTN1 0.024 kinectin 1 isoform a KTN1 0.024 kinectin 1 isoform c KTN1 0.024 kinectin 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.