ATL1 11664

Name: ATL1	Sequence: fasta or formatted (558aa)		NCBI GI: 19923445
Description: atlastin GTPase 1 isoform a		Referenced in: ADP-Ribosylation Factors
Other entries for this name: alt prot [553aa] atlastin GTPase 1 isoform b alt prot [553aa] atlastin GTPase 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 38 3 C cysteine 1.1 6 1 D aspartate 5.0 28 2 E glutamate 8.2 46 4 F phenylalanine 5.2 29 1 G glycine 6.1 34 2 H histidine 2.3 13 1 I isoleucine 6.3 35 2 K lysine 7.5 42 3 L leucine 10.0 56 2 M methionine 2.3 13 1 N asparagine 4.3 24 2 P proline 3.2 18 1 Q glutamine 4.3 24 2 R arginine 3.9 22 2 S serine 7.0 39 2 T threonine 5.4 30 2 V valine 5.4 30 2 W tryptophan 1.6 9 1 Y tyrosine 3.9 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 atlastin GTPase 1 isoform a ATL1 0.985 atlastin GTPase 1 isoform b ATL1 0.985 atlastin GTPase 1 isoform b ATL2 0.673 atlastin GTPase 2 isoform 1 ATL2 0.668 atlastin GTPase 2 isoform 2 ATL3 0.598 atlastin 3 RNF112 0.064 ring finger protein 112 GBP2 0.047 guanylate binding protein 2, interferon-inducible [H... GBP4 0.047 guanylate binding protein 4 GBP6 0.045 guanylate binding protein family, member 6 GBP7 0.042 guanylate binding protein 4-like GBP3 0.040 guanylate binding protein 3 GBP5 0.039 guanylate-binding protein 5 GBP5 0.039 guanylate-binding protein 5 GBP1 0.037 guanylate binding protein 1, interferon-inducible, ... GRIPAP1 0.009 GRIP1 associated protein 1 isoform 2 TMC1 0.007 transmembrane channel-like 1 IDO1 0.007 indoleamine 2,3-dioxygenase 1 KIAA1826 0.007 hypothetical protein LOC84437 PIK3R1 0.006 phosphoinositide-3-kinase, regulatory subunit 1 (alp... PIK3R1 0.006 phosphoinositide-3-kinase, regulatory subunit 1 (alp... PIK3R1 0.006 phosphoinositide-3-kinase, regulatory subunit 1 (alp... NAMPT 0.006 nicotinamide phosphoribosyltransferase precursor [Hom... CLNK 0.005 mast cell immunoreceptor signal transducer TIAM2 0.005 T-cell lymphoma invasion and metastasis 2 isoform a ... GTF2F1 0.005 general transcription factor IIF, polypeptide 1, 74... PKD1 0.005 polycystin 1 isoform 2 precursor PKD1 0.005 polycystin 1 isoform 1 precursor ABCC10 0.005 ATP-binding cassette, sub-family C, member 10 IFNGR1 0.004 interferon gamma receptor 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.