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Search of human proteins with 208431769
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|208431769 basophilic leukemia expressed protein BLES03
isoform 2 [Homo sapiens]
(292 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|208431769 basophilic leukemia expressed protein BLES03 isofor... 599 e-172
gi|208431771 basophilic leukemia expressed protein BLES03 isofor... 595 e-170
gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens] 37 0.021
gi|9966841 cell death regulator aven [Homo sapiens] 35 0.078
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 34 0.13
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 34 0.13
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 34 0.17
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 34 0.17
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 34 0.17
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 34 0.17
gi|14110420 heterogeneous nuclear ribonucleoprotein D isoform a ... 33 0.30
gi|14110414 heterogeneous nuclear ribonucleoprotein D isoform c ... 33 0.30
gi|10863889 squamous cell carcinoma antigen recognized by T cell... 33 0.39
gi|57863269 ribosomal RNA processing 1 homolog B [Homo sapiens] 32 0.51
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 32 0.86
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 32 0.86
gi|27734897 hypothetical protein LOC203111 [Homo sapiens] 32 0.86
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 31 1.1
gi|239754777 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
gi|239749305 PREDICTED: hypothetical protein XP_002346991 [Homo ... 31 1.1
gi|169167297 PREDICTED: similar to hCG18094 [Homo sapiens] 31 1.1
gi|239743399 PREDICTED: hypothetical protein XP_002342839 [Homo ... 31 1.1
gi|169166473 PREDICTED: similar to hCG18094 [Homo sapiens] 31 1.1
gi|239509098 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 31 1.1
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 31 1.1
gi|169166558 PREDICTED: similar to hCG18094 [Homo sapiens] 31 1.5
gi|14110417 heterogeneous nuclear ribonucleoprotein D isoform b ... 31 1.5
gi|51477708 heterogeneous nuclear ribonucleoprotein D isoform d ... 31 1.5
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 31 1.5
>gi|208431769 basophilic leukemia expressed protein BLES03 isoform 2
[Homo sapiens]
Length = 292
Score = 599 bits (1545), Expect = e-172
Identities = 292/292 (100%), Positives = 292/292 (100%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDG 60
MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDG
Sbjct: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDG 60
Query: 61 FTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGWI 120
FTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGWI
Sbjct: 61 FTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGWI 120
Query: 121 AVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFKL 180
AVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFKL
Sbjct: 121 AVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFKL 180
Query: 181 DHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIKC 240
DHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIKC
Sbjct: 181 DHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIKC 240
Query: 241 LLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT 292
LLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT
Sbjct: 241 LLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT 292
>gi|208431771 basophilic leukemia expressed protein BLES03 isoform 1
[Homo sapiens]
Length = 293
Score = 595 bits (1533), Expect = e-170
Identities = 292/293 (99%), Positives = 292/293 (99%), Gaps = 1/293 (0%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGR-RMEPGEELEEEGSPGGRED 59
MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGR RMEPGEELEEEGSPGGRED
Sbjct: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRSRMEPGEELEEEGSPGGRED 60
Query: 60 GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW 119
GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW
Sbjct: 61 GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSEPVGW 120
Query: 120 IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK 179
IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK
Sbjct: 121 IAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQLAITHHVLSGKWLMHLAPGFK 180
Query: 180 LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK 239
LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK
Sbjct: 181 LDHAWAGIARAVVEGQLQVAKVSPRAKEGGRQVICVYTDDFTDRLGVLEADSAIRAAGIK 240
Query: 240 CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT 292
CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT
Sbjct: 241 CLLTYKPDVYTYLGIYRANRWHLCPTLYESRFQLGGSARGSRVLDRANNVELT 293
>gi|4758876 poly(A) binding protein, nuclear 1 [Homo sapiens]
Length = 306
Score = 37.0 bits (84), Expect = 0.021
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 25/118 (21%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGRED- 59
MAAAAAAA A GG G+ P + R G G E G EG+PGG D
Sbjct: 1 MAAAAAAAAAAGAAGGRGSGPGRRRHLVPGAGG---------EAG-----EGAPGGAGDY 46
Query: 60 --GFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNSE 115
G +E L E + + +P P E + + PP G+P S+
Sbjct: 47 GNGLESEELEPEELLLEPEP--------EPEPEEEPPRPRAPPGAPGPGPGSGAPGSQ 96
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 35.0 bits (79), Expect = 0.078
Identities = 24/74 (32%), Positives = 28/74 (37%)
Query: 3 AAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDGFT 62
AAAA A G G GGG R+ R R RG+ G G P E G G
Sbjct: 31 AAAAVARGGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAGASAPV 90
Query: 63 AEHLAAEAMAADMD 76
+ AE + D
Sbjct: 91 EDDSDAETYGEEND 104
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 99 PPSQVTRYGDPGSPNSEPVGWIAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQ 158
PP +T + + P+GW + Y G S S D G ++W L+ I TLR
Sbjct: 1510 PPPGLTNPKPSSTWGASPLGWTSSYSSG-SAWSTDTSGRTSSWLVLRNLTPQIDGSTLRT 1568
Query: 159 LAITH 163
L + H
Sbjct: 1569 LCLQH 1573
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 99 PPSQVTRYGDPGSPNSEPVGWIAVYGQGYSPNSGDVQGLQAAWEALQTSGRPITPGTLRQ 158
PP +T + + P+GW + Y G S S D G ++W L+ I TLR
Sbjct: 1474 PPPGLTNPKPSSTWGASPLGWTSSYSSG-SAWSTDTSGRTSSWLVLRNLTPQIDGSTLRT 1532
Query: 159 LAITH 163
L + H
Sbjct: 1533 LCLQH 1537
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 33.9 bits (76), Expect = 0.17
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 22 RQERSRARGWAGVERSEGRRMEPGEELEE--EGSPGGREDGFTAEHLAAEAMAAD 74
RQE A GW +E+ E P E LEE EG G E+ E +A D
Sbjct: 360 RQEEEEAEGWEELEQQEAEVQGPPEALEETGEGRRGAEEEDLGEEEEEGQAHLED 414
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 33.9 bits (76), Expect = 0.17
Identities = 43/177 (24%), Positives = 60/177 (33%), Gaps = 32/177 (18%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGE------ELEEEGSP 54
+AAAAAAA A G GGGG + ++ G M PG GS
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
Query: 55 GGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNS 114
G F ++ ++ L T+P+ + ++ YP Y P +P
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLL-----TSPSPMMRSYGGSYP-----EYSSPSAPPP 390
Query: 115 EPV--------------GWIAVYGQGYSPNSG-DVQGLQAAWEALQTSGRP-ITPGT 155
P G A G G + G AW A Q P ++PGT
Sbjct: 391 PPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT 447
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 33.9 bits (76), Expect = 0.17
Identities = 43/177 (24%), Positives = 60/177 (33%), Gaps = 32/177 (18%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGE------ELEEEGSP 54
+AAAAAAA A G GGGG + ++ G M PG GS
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
Query: 55 GGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNS 114
G F ++ ++ L T+P+ + ++ YP Y P +P
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLL-----TSPSPMMRSYGGSYP-----EYSSPSAPPP 390
Query: 115 EPV--------------GWIAVYGQGYSPNSG-DVQGLQAAWEALQTSGRP-ITPGT 155
P G A G G + G AW A Q P ++PGT
Sbjct: 391 PPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT 447
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 33.9 bits (76), Expect = 0.17
Identities = 43/177 (24%), Positives = 60/177 (33%), Gaps = 32/177 (18%)
Query: 1 MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGE------ELEEEGSP 54
+AAAAAAA A G GGGG + ++ G M PG GS
Sbjct: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
Query: 55 GGREDGFTAEHLAAEAMAADMDPWLVFDARTTPATELDAWLAKYPPSQVTRYGDPGSPNS 114
G F ++ ++ L T+P+ + ++ YP Y P +P
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLL-----TSPSPMMRSYGGSYP-----EYSSPSAPPP 390
Query: 115 EPV--------------GWIAVYGQGYSPNSG-DVQGLQAAWEALQTSGRP-ITPGT 155
P G A G G + G AW A Q P ++PGT
Sbjct: 391 PPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT 447
>gi|14110420 heterogeneous nuclear ribonucleoprotein D isoform a
[Homo sapiens]
Length = 355
Score = 33.1 bits (74), Expect = 0.30
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 14/78 (17%)
Query: 4 AAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDGFTA 63
AAAAA +G G GGG A E G SEG +++ + E+EG +
Sbjct: 37 AAAAAGSGAGTGGGTASGGTE-------GGSAESEGAKIDASKNEEDEG-----HSNSSP 84
Query: 64 EHLAAEAMAADMDPWLVF 81
H +EA A + W +F
Sbjct: 85 RH--SEAATAQREEWKMF 100
>gi|14110414 heterogeneous nuclear ribonucleoprotein D isoform c
[Homo sapiens]
Length = 306
Score = 33.1 bits (74), Expect = 0.30
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 14/78 (17%)
Query: 4 AAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDGFTA 63
AAAAA +G G GGG A E G SEG +++ + E+EG +
Sbjct: 37 AAAAAGSGAGTGGGTASGGTE-------GGSAESEGAKIDASKNEEDEG-----HSNSSP 84
Query: 64 EHLAAEAMAADMDPWLVF 81
H +EA A + W +F
Sbjct: 85 RH--SEAATAQREEWKMF 100
>gi|10863889 squamous cell carcinoma antigen recognized by T cells
1 [Homo sapiens]
Length = 800
Score = 32.7 bits (73), Expect = 0.39
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 13 GRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGRE 58
G GG G E R++RSR RG ER GRR G E E S GRE
Sbjct: 44 GSGGSGGE-RRKRSRERGG---ERGSGRR---GAEAEARSSTHGRE 82
>gi|57863269 ribosomal RNA processing 1 homolog B [Homo sapiens]
Length = 758
Score = 32.3 bits (72), Expect = 0.51
Identities = 44/151 (29%), Positives = 60/151 (39%), Gaps = 23/151 (15%)
Query: 15 GGGGAEPRQERSRARG--WAGVERSEGRRMEPGEELEEEGSPGGREDGFTAEHLAAEAMA 72
G GGA P E++R R +G++ + R EPG E S G E G +EH A M
Sbjct: 415 GPGGAAPSLEQNRGREPEASGLKALKARVAEPGAEAT---SSTGEESG--SEHPPAVPMH 469
Query: 73 ADMDPWLVFDARTTPATELDAW-LAKYPPSQVTRYGDPGS----PNSEPVGWIAVYGQ-- 125
+ +P + A PP +++ G GS P P G + +
Sbjct: 470 NKRKR----PRKKSPRAHREMLESAVLPPEDMSQSGPSGSHPQGPRGSPTGGAQLLKRKR 525
Query: 126 --GYSPNSGDVQGLQA-AWEALQTSGRPITP 153
G P +G GL AW LQ G P P
Sbjct: 526 KLGVVPVNG--SGLSTPAWPPLQQEGPPTGP 554
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 31.6 bits (70), Expect = 0.86
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 2 AAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVER--------SEGRRME-PGEELEEEG 52
A+AA AA A G GG G P R G ER S GR E E +G
Sbjct: 162 ASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDG 221
Query: 53 SPGGRE 58
GG E
Sbjct: 222 QRGGSE 227
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 31.6 bits (70), Expect = 0.86
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 2 AAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVER--------SEGRRME-PGEELEEEG 52
A+AA AA A G GG G P R G ER S GR E E +G
Sbjct: 162 ASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDG 221
Query: 53 SPGGRE 58
GG E
Sbjct: 222 QRGGSE 227
>gi|27734897 hypothetical protein LOC203111 [Homo sapiens]
Length = 374
Score = 31.6 bits (70), Expect = 0.86
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 18 GAEPRQERSRAR----GWAGVERSEG-RRMEPGEELEEEG--SPGGREDGFTAEHLAAEA 70
G +P QE+ A+ G ++S + +PGE LEE G PGG+ED AE +A
Sbjct: 75 GVKPLQEQPLAKDVAPGRDATDQSGSTEKTQPGEGLEESGPPQPGGKEDAPAAEGKKKDA 134
Query: 71 MAADMDPWLVFDARTTP 87
A L +A P
Sbjct: 135 GAGTEAESLKGNAEAQP 151
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 31.2 bits (69), Expect = 1.1
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 6 AAAVAGVGRGGGGAEPRQERS---RARGWAGVERSEGRRM------EPGEELEEEGSPGG 56
AAA GGGG +P++ R+ R RGW + R G++ + G++L ++G G
Sbjct: 185 AAAAGAKSCGGGGKKPQKARAVGARRRGWKKLRR-RGKKAAAAGGEKAGKKLRQQGEKGR 243
Query: 57 REDGFTAEHLAA 68
++ + AA
Sbjct: 244 KKPRRRGQKAAA 255
>gi|239754777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 242
Score = 31.2 bits (69), Expect = 1.1
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 22/69 (31%)
Query: 15 GGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDGF-------TAEHLA 67
GGGG E + W G+ RS GR+ EPGE GR F T EH
Sbjct: 28 GGGGQEGK--------WGGLSRSTGRQEEPGE-------ADGRAYTFHLSVGEDTGEHHH 72
Query: 68 AEAMAADMD 76
AE D D
Sbjct: 73 AERHCEDED 81
>gi|239749305 PREDICTED: hypothetical protein XP_002346991 [Homo
sapiens]
Length = 242
Score = 31.2 bits (69), Expect = 1.1
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 22/69 (31%)
Query: 15 GGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDGF-------TAEHLA 67
GGGG E + W G+ RS GR+ EPGE GR F T EH
Sbjct: 28 GGGGQEGK--------WGGLSRSTGRQEEPGE-------ADGRAYTFHLSVGEDTGEHHH 72
Query: 68 AEAMAADMD 76
AE D D
Sbjct: 73 AERHCEDED 81
>gi|169167297 PREDICTED: similar to hCG18094 [Homo sapiens]
Length = 459
Score = 31.2 bits (69), Expect = 1.1
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 4 AAAAAVAGVGRGGGGAEPR--------QERSRARGWAGVERSEGRRMEPGEELEEEGSPG 55
+AA A G GGGG P Q + A+ W +ERS RR+ + L++ GS
Sbjct: 394 SAAGRYAAAGAGGGGGVPARADAFPGLQAQLEAQHWLELERSRERRL---QALQQGGSGP 450
Query: 56 G 56
G
Sbjct: 451 G 451
>gi|239743399 PREDICTED: hypothetical protein XP_002342839 [Homo
sapiens]
Length = 242
Score = 31.2 bits (69), Expect = 1.1
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 22/69 (31%)
Query: 15 GGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDGF-------TAEHLA 67
GGGG E + W G+ RS GR+ EPGE GR F T EH
Sbjct: 28 GGGGQEGK--------WGGLSRSTGRQEEPGE-------ADGRAYTFHLSVGEDTGEHHH 72
Query: 68 AEAMAADMD 76
AE D D
Sbjct: 73 AERHCEDED 81
>gi|169166473 PREDICTED: similar to hCG18094 [Homo sapiens]
Length = 459
Score = 31.2 bits (69), Expect = 1.1
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 4 AAAAAVAGVGRGGGGAEPR--------QERSRARGWAGVERSEGRRMEPGEELEEEGSPG 55
+AA A G GGGG P Q + A+ W +ERS RR+ + L++ GS
Sbjct: 394 SAAGRYAAAGAGGGGGVPARADAFPGLQAQLEAQHWLELERSRERRL---QALQQGGSGP 450
Query: 56 G 56
G
Sbjct: 451 G 451
>gi|239509098 PREDICTED: hypothetical protein [Homo sapiens]
Length = 242
Score = 31.2 bits (69), Expect = 1.1
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 22/69 (31%)
Query: 15 GGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEGSPGGREDGF-------TAEHLA 67
GGGG E + W G+ RS GR+ EPGE GR F T EH
Sbjct: 28 GGGGQEGK--------WGGLSRSTGRQEEPGE-------ADGRAYTFHLSVGEDTGEHHH 72
Query: 68 AEAMAADMD 76
AE D D
Sbjct: 73 AERHCEDED 81
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 11 GVGRGGGGAEPRQERS-RARGWAGVERSEGRRMEPGEELEEEGSPGGREDGFTAEHLAAE 69
G G GGG AE E S + AG + E E EE +E S GG E+ +AE L
Sbjct: 71 GGGVGGGEAETMSEPSPESASQAGEDEDEEEDDE--EEEDESSSSGGGEEESSAESLVGS 128
Query: 70 AMAADMD 76
+ + D
Sbjct: 129 SGGSSSD 135
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 11 GVGRGGGGAEPRQERS-RARGWAGVERSEGRRMEPGEELEEEGSPGGREDGFTAEHLAAE 69
G G GGG AE E S + AG + E E EE +E S GG E+ +AE L
Sbjct: 71 GGGVGGGEAETMSEPSPESASQAGEDEDEEEDDE--EEEDESSSSGGGEEESSAESLVGS 128
Query: 70 AMAADMD 76
+ + D
Sbjct: 129 SGGSSSD 135
>gi|169166558 PREDICTED: similar to hCG18094 [Homo sapiens]
Length = 459
Score = 30.8 bits (68), Expect = 1.5
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 4 AAAAAVAGVGRGGGGAEPRQERS--------RARGWAGVERSEGRRMEPGEELEEEGSPG 55
+AA A G GGGG P + S A+ W +ERS RR+ + L++ GS
Sbjct: 394 SAAGRYAAAGAGGGGGVPARADSFPGLHAQLEAQHWLELERSRERRL---QALQQGGSGP 450
Query: 56 G 56
G
Sbjct: 451 G 451
>gi|14110417 heterogeneous nuclear ribonucleoprotein D isoform b
[Homo sapiens]
Length = 336
Score = 30.8 bits (68), Expect = 1.5
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 4 AAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEG 52
AAAAA +G G GGG A E G SEG +++ + E+EG
Sbjct: 37 AAAAAGSGAGTGGGTASGGTE-------GGSAESEGAKIDASKNEEDEG 78
>gi|51477708 heterogeneous nuclear ribonucleoprotein D isoform d
[Homo sapiens]
Length = 287
Score = 30.8 bits (68), Expect = 1.5
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Query: 4 AAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRRMEPGEELEEEG 52
AAAAA +G G GGG A E G SEG +++ + E+EG
Sbjct: 37 AAAAAGSGAGTGGGTASGGTE-------GGSAESEGAKIDASKNEEDEG 78
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 30.8 bits (68), Expect = 1.5
Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 15/127 (11%)
Query: 6 AAAVAGVGRGGGGAEPRQERSRARGWAG--VERSEGRRMEPGEELEEEGSPGGREDGFTA 63
++A + G G+E +E G E SE E EE EE GS +A
Sbjct: 266 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEASEQSA 325
Query: 64 EHLAAEAMAADMD----------PWLVFDARTTPATELDAWLAK-YPPSQVTRYGD--PG 110
E ++ E M+ D + P FD + + E + + + P S GD P
Sbjct: 326 EEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEGDYVPD 385
Query: 111 SPNSEPV 117
SP P+
Sbjct: 386 SPALSPI 392
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,885,719
Number of Sequences: 37866
Number of extensions: 652207
Number of successful extensions: 2989
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 2764
Number of HSP's gapped (non-prelim): 250
length of query: 292
length of database: 18,247,518
effective HSP length: 101
effective length of query: 191
effective length of database: 14,423,052
effective search space: 2754802932
effective search space used: 2754802932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.