Guide to the Human Genome
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Name: C11orf68 Sequence: fasta or formatted (293aa) NCBI GI: 208431771
Description:

basophilic leukemia expressed protein BLES03 isoform 1

Referenced in:

Neutrophils, Eosinophils, and Basophils

Other entries for this name:
alt prot [292aa] basophilic leukemia expressed protein BLES03 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.7         40           7
 C cysteine            1.0          3           1
 D aspartate           4.8         14           2
 E glutamate           7.2         21           3
 F phenylalanine       1.7          5           1
 G glycine            11.9         35           4
 H histidine           2.0          6           2
 I isoleucine          2.7          8           1
 K lysine              2.4          7           1
 L leucine             8.2         24           2
 M methionine          1.7          5           1
 N asparagine          1.7          5           2
 P proline             5.8         17           2
 Q glutamine           3.8         11           1
 R arginine            8.2         24           1
 S serine              5.5         16           1
 T threonine           5.1         15           2
 V valine              6.5         19           2
 W tryptophan          2.7          8           1
 Y tyrosine            3.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   basophilic leukemia expressed protein BLES03 isofor... 
C11orf68              0.990   basophilic leukemia expressed protein BLES03 isofor...
PABPN1                0.021   poly(A) binding protein, nuclear 1 
CDC2L5                0.021   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.021   cell division cycle 2-like 5 isoform 2 
C8orf47               0.019   hypothetical protein LOC203111 
AVEN                  0.017   cell death regulator aven 
TNRC6C                0.016   trinucleotide repeat containing 6C isoform 1 
TNRC6C                0.016   trinucleotide repeat containing 6C isoform 2 
LEMD2                 0.014   LEM domain containing 2 isoform 1 
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.014   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
LOC100292062          0.012   PREDICTED: hypothetical protein XP_002346314 
RPGR                  0.012   retinitis pigmentosa GTPase regulator isoform C [Hom...
LOC100292370          0.010   PREDICTED: hypothetical protein 
GFM1                  0.010   G elongation factor, mitochondrial 1 
MECP2                 0.009   methyl CpG binding protein 2 isoform 2 
LOC100291586          0.009   PREDICTED: hypothetical protein XP_002345859 
LOC100291394          0.009   PREDICTED: hypothetical protein XP_002346737 
LOC100288032          0.009   PREDICTED: hypothetical protein XP_002342573 
MLL2                  0.009   myeloid/lymphoid or mixed-lineage leukemia 2 
DACH1                 0.009   dachshund homolog 1 isoform b 
DACH1                 0.009   dachshund homolog 1 isoform a 
DACH1                 0.009   dachshund homolog 1 isoform c 
KIAA1211              0.009   hypothetical protein LOC57482 
MLL4                  0.009   myeloid/lymphoid or mixed-lineage leukemia 4 
SART1                 0.009   squamous cell carcinoma antigen recognized by T cell...
CDC2L1                0.009   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.009   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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