Search of human proteins with 206725452

Search of human proteins with 206725452

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo
sapiens]
         (501 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sap...  1025   0.0  
gi|6679074 nucleoporin like 2 [Homo sapiens]                           47   4e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     41   0.002
gi|236459851 ubinuclein 2 [Homo sapiens]                               40   0.005
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       39   0.008
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         39   0.008
gi|194328809 latent transforming growth factor beta binding prot...    38   0.019
gi|239748384 PREDICTED: hypothetical protein XP_002346651 [Homo ...    38   0.025
gi|239742312 PREDICTED: hypothetical protein XP_002342488 [Homo ...    38   0.025
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          37   0.032
gi|66472382 nischarin [Homo sapiens]                                   37   0.032
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             37   0.042
gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]            36   0.071
gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]            36   0.071
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]            36   0.071
gi|46370064 endothelin 3 isoform 1 preproprotein [Homo sapiens]        36   0.093
gi|46370062 endothelin 3 isoform 3 preproprotein [Homo sapiens]        36   0.093
gi|46370060 endothelin 3 isoform 2 preproprotein [Homo sapiens]        36   0.093
gi|4557545 endothelin 3 isoform 1 preproprotein [Homo sapiens]         36   0.093
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ...    35   0.12 
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ...    35   0.12 
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    35   0.12 
gi|210032580 SET domain containing 1B [Homo sapiens]                   35   0.12 
gi|157785645 SPEG complex locus [Homo sapiens]                         35   0.12 
gi|223468617 family with sequence similarity 75, member C1 [Homo...    35   0.16 
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              35   0.16 
gi|46852392 chromobox homolog 6 [Homo sapiens]                         35   0.16 
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]            35   0.21 
gi|239749263 PREDICTED: hypothetical protein [Homo sapiens]            35   0.21 
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ...    35   0.21 

>gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo
           sapiens]
          Length = 501

 Score = 1025 bits (2650), Expect = 0.0
 Identities = 501/501 (100%), Positives = 501/501 (100%)

Query: 1   MGSRPPCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARC 60
           MGSRPPCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARC
Sbjct: 1   MGSRPPCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARC 60

Query: 61  RQPHPGAPAPPGREAQPEAGAKKPPLRTAADVIQRIRWDPRLDPADFSVGYVDRFLGVRE 120
           RQPHPGAPAPPGREAQPEAGAKKPPLRTAADVIQRIRWDPRLDPADFSVGYVDRFLGVRE
Sbjct: 61  RQPHPGAPAPPGREAQPEAGAKKPPLRTAADVIQRIRWDPRLDPADFSVGYVDRFLGVRE 120

Query: 121 EPFSAFCWDQPLAALGPGVLAVPQHRVRFFRFHGRLVWDRASRTDLVFGSGSAAGRGPTI 180
           EPFSAFCWDQPLAALGPGVLAVPQHRVRFFRFHGRLVWDRASRTDLVFGSGSAAGRGPTI
Sbjct: 121 EPFSAFCWDQPLAALGPGVLAVPQHRVRFFRFHGRLVWDRASRTDLVFGSGSAAGRGPTI 180

Query: 181 LDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEEPGELEAAQERA 240
           LDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEEPGELEAAQERA
Sbjct: 181 LDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEEPGELEAAQERA 240

Query: 241 LGTAADLGTLAPRGRLAGVTEEALKPTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPA 300
           LGTAADLGTLAPRGRLAGVTEEALKPTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPA
Sbjct: 241 LGTAADLGTLAPRGRLAGVTEEALKPTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPA 300

Query: 301 AWPEDKRARLSVAAPCQPRPTHFVALMVTEPGLQAEVTKAQEYLVHVAPHCANFLVPSQN 360
           AWPEDKRARLSVAAPCQPRPTHFVALMVTEPGLQAEVTKAQEYLVHVAPHCANFLVPSQN
Sbjct: 301 AWPEDKRARLSVAAPCQPRPTHFVALMVTEPGLQAEVTKAQEYLVHVAPHCANFLVPSQN 360

Query: 361 LHLTLALLRLAGAGEEAAAIGALRRALLAPGLNAPPRLSFRKLVLLGPHVLCAPPSPTLE 420
           LHLTLALLRLAGAGEEAAAIGALRRALLAPGLNAPPRLSFRKLVLLGPHVLCAPPSPTLE
Sbjct: 361 LHLTLALLRLAGAGEEAAAIGALRRALLAPGLNAPPRLSFRKLVLLGPHVLCAPPSPTLE 420

Query: 421 SMAQVLSQRLEAEGLSTLQSPGQLHPHLTVAKVPHGSQVHLPKLEFTLSQEVGCQPLQTL 480
           SMAQVLSQRLEAEGLSTLQSPGQLHPHLTVAKVPHGSQVHLPKLEFTLSQEVGCQPLQTL
Sbjct: 421 SMAQVLSQRLEAEGLSTLQSPGQLHPHLTVAKVPHGSQVHLPKLEFTLSQEVGCQPLQTL 480

Query: 481 WLCRIGRTGGPFQPLAEIRLE 501
           WLCRIGRTGGPFQPLAEIRLE
Sbjct: 481 WLCRIGRTGGPFQPLAEIRLE 501


>gi|6679074 nucleoporin like 2 [Homo sapiens]
          Length = 423

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 19/33 (57%), Positives = 22/33 (66%)

Query: 46 CRFFLEGRCRFGARCRQPHPGAPAPPGREAQPE 78
          C+FFL+GRCRFG RC   HPGA    G   QP+
Sbjct: 4  CQFFLQGRCRFGDRCWNEHPGARGAGGGRQQPQ 36


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 33/86 (38%), Positives = 33/86 (38%), Gaps = 1/86 (1%)

Query: 5   PPCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARCRQPH 64
           P  GAT  A       AP AAA     P  AP   PAP  A       R    A    P 
Sbjct: 102 PRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPS 161

Query: 65  PGAPAPPGREAQPEAGAKKPPLRTAA 90
           PG PA PG  AQ  A    PP   AA
Sbjct: 162 PG-PAQPGPRAQRAAPLAAPPPAPAA 186



 Score = 36.2 bits (82), Expect = 0.071
 Identities = 32/95 (33%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 4   RPPCGATSSARRACQFP--------APMAAAREPELPQEAPATEPAPPPACRFFLEGRCR 55
           R P GA ++A  A   P        AP+AAA     P+ A A   APP         R +
Sbjct: 113 RAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQ 172

Query: 56  FGARCRQPHPGAPAPPGREAQPEAGAKKPPLRTAA 90
             A    P P APA P   A P    + PP   AA
Sbjct: 173 RAAPLAAPPP-APAAPPAVAPPAGPRRAPPPAVAA 206



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 29/82 (35%), Positives = 31/82 (37%), Gaps = 24/82 (29%)

Query: 5   PPCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARCRQPH 64
           PP G     RRA   P P  AAREP LP   P   PAPP                 +QP 
Sbjct: 192 PPAGP----RRA---PPPAVAAREPPLPP--PPQPPAPPQQ---------------QQPP 227

Query: 65  PGAPAPPGREAQPEAGAKKPPL 86
           P  P PP       AG    P+
Sbjct: 228 PPQPQPPPEGGAVRAGGAARPV 249



 Score = 30.8 bits (68), Expect = 3.0
 Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 20/89 (22%)

Query: 5   PPCGATSSARRACQFPAPMAAAREPELPQEAPATEP------APPPACRFFLEGRCRFGA 58
           PP    +      Q  AP+AA   P  P   PA  P      APPPA            A
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAP--PPAPAAPPAVAPPAGPRRAPPPAV----------AA 206

Query: 59  R--CRQPHPGAPAPPGREAQPEAGAKKPP 85
           R     P P  PAPP ++  P    + PP
Sbjct: 207 REPPLPPPPQPPAPPQQQQPPPPQPQPPP 235


>gi|236459851 ubinuclein 2 [Homo sapiens]
          Length = 1347

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 15/74 (20%)

Query: 14 RRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARCRQPHPGAPAPPGR 73
          RR  ++P P    REPE P+E P  EP P            R  AR   P P  PAP   
Sbjct: 17 RREAEYPGP---EREPEYPREPPRLEPQP-----------YREPARAEPPAPREPAPRS- 61

Query: 74 EAQPEAGAKKPPLR 87
          +AQP +  K  P R
Sbjct: 62 DAQPPSREKPLPQR 75


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 5   PPCGATSSARRA----CQFPAPMAAAREPELPQEAPATEPAPPPACRF-FLEGRCRFGAR 59
           PPC +    RR+    C  P    +   P  P   P      PP+C+    + R      
Sbjct: 361 PPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQRRSPVPPS 420

Query: 60  CR--QPHPGAPAPPGREAQPEAGAKKPP 85
           C   QP P  P PPG     E    KPP
Sbjct: 421 CPAPQPRPPPPPPPGERTLAERAYAKPP 448


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 42  PPPACRFFLEGRCRFGARCRQPHPG 66
           P P CRFF++G C +G  CR  HPG
Sbjct: 220 PRPTCRFFMKGNCTWGMNCRFIHPG 244


>gi|194328809 latent transforming growth factor beta binding protein 3
            isoform 1 [Homo sapiens]
          Length = 1303

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 14   RRACQFPAPMAAAREPEL-PQEAPATEPAPPPACRFFLEGRC---RFGARCRQPHPGAPA 69
            R AC  PA  + A+   L P+E    E   P ACR    GRC       RC    P  P 
Sbjct: 1059 RCACTPPAEYSPAQRQCLSPEEMDVDECQDPAACR---PGRCVNLPGSYRCECRPPWVPG 1115

Query: 70   PPGREAQ-PEAGAKKPPLR 87
            P GR+ Q PE+ A++ P R
Sbjct: 1116 PSGRDCQLPESPAERAPER 1134


>gi|239748384 PREDICTED: hypothetical protein XP_002346651 [Homo
           sapiens]
          Length = 246

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 14/93 (15%)

Query: 1   MGSRPPCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGAR- 59
           + + P CG    AR       P    R    P  AP  +P PPP+C       C+ G+R 
Sbjct: 163 LSTLPSCGPEKPAR----IENPERPCRRTPAPG-APRLQPPPPPSC------SCQPGSRS 211

Query: 60  --CRQPHPGAPAPPGREAQPEAGAKKPPLRTAA 90
             C +P   AP  P   A+ E  A  P    AA
Sbjct: 212 SECLEPERRAPPRPANPAKRERAAAAPRSAPAA 244


>gi|239742312 PREDICTED: hypothetical protein XP_002342488 [Homo
           sapiens]
          Length = 246

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 14/93 (15%)

Query: 1   MGSRPPCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGAR- 59
           + + P CG    AR       P    R    P  AP  +P PPP+C       C+ G+R 
Sbjct: 163 LSTLPSCGPEKPAR----IENPERPCRRTPAPG-APRLQPPPPPSC------SCQPGSRS 211

Query: 60  --CRQPHPGAPAPPGREAQPEAGAKKPPLRTAA 90
             C +P   AP  P   A+ E  A  P    AA
Sbjct: 212 SECLEPERRAPPRPANPAKRERAAAAPRSAPAA 244


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 6/118 (5%)

Query: 155 RLVWDRASRTDLVFGSGSAAGRGPTILDAPNTEGAHGAEGAEWTL----AGTGQEAQAAP 210
           RL W  +     V GS S+AG G ++  A     A G      T     AG G   + +P
Sbjct: 209 RLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGAGARGKLSP 268

Query: 211 KRGSTRPLCTG--HQEPGVEEPGELEAAQERALGTAADLGTLAPRGRLAGVTEEALKP 266
           ++G ++ L     H  P    P  L      +  TA    +  P G    +T E   P
Sbjct: 269 RKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPPGPAPPITLEPPAP 326


>gi|66472382 nischarin [Homo sapiens]
          Length = 1504

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 17/40 (42%), Positives = 22/40 (55%)

Query: 6    PCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPA 45
            P  A +SA    + PAP  A+    +P+E P   PAPPPA
Sbjct: 1061 PAPAAASASGPAKTPAPAEASTSALVPEETPVEAPAPPPA 1100


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 37.0 bits (84), Expect = 0.042
 Identities = 80/348 (22%), Positives = 106/348 (30%), Gaps = 72/348 (20%)

Query: 2   GSRPPCG----ATSSARRACQFPAPMAAAREPELPQ---EAPATEPAPPPACRFFLEGRC 54
           G  PP G    AT  A      P  +A+     +P+     P T+PA         +G  
Sbjct: 373 GEAPPAGPCAPATDKAEEVVCAPEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPE 432

Query: 55  RFGARCRQPHPGA-----PAPPGREAQPEAGAKKPPLRTAADVIQRIRWDPRLDPADFSV 109
           R   +  +P P         PPG   +PE  A+  P R A    +RI  +P   PA    
Sbjct: 433 RSVPKEAEPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPERIGTEPSTAPAP--- 489

Query: 110 GYVDRFLGVREEPFSAFCWDQPLAALGPGVLAVPQHRVRFFRFHGRLVWDRASRTDLVFG 169
                       P    C     AA   G  A P                      L   
Sbjct: 490 ----------SPPAPKSCLKHRPAAASEGPAASP---------------------PLAAA 518

Query: 170 SGSAAGRGPTILD----APNTEGAHGAE----GAEWTLAGTGQEAQAAPKRGSTR---PL 218
                  GP  LD    AP    A  AE    GAE        E   A  RG+ +     
Sbjct: 519 ESPPVEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGAELRGAKKFSVSS 578

Query: 219 CTGHQEPGVEEPGELEAAQERALGTAADLGTLAPRGRLAGVTE-EALKPTAATRTTLLGG 277
           C     PGV  P E  + +     +     + A    L G+ E +  KP          G
Sbjct: 579 CRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKP----------G 628

Query: 278 KEAQALGVPGGSAETTEAEWGPAAWPEDKRARLSVAAPC----QPRPT 321
               A   P  S +   +  GP   P++  A      PC    +P P+
Sbjct: 629 PRKLAERGPQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPS 676



 Score = 29.3 bits (64), Expect = 8.7
 Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 3/92 (3%)

Query: 5   PPCGATSSARRACQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARCRQPH 64
           PP GA +   R     A  A+  E  +P E P++ PA P           R         
Sbjct: 301 PPGGARARRARLQHSSALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEG 360

Query: 65  PGAPAPPGREAQ---PEAGAKKPPLRTAADVI 93
           P  P P G +     P AG   P    A +V+
Sbjct: 361 PPNPGPDGGKQDGEAPPAGPCAPATDKAEEVV 392


>gi|239749721 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 36.2 bits (82), Expect = 0.071
 Identities = 53/187 (28%), Positives = 73/187 (39%), Gaps = 32/187 (17%)

Query: 65  PGAPAPPGREA-QPEAGAKKPPLRTAADVIQRIR----------W-------DPRLDPAD 106
           P  P  PGR+A QPEA  ++P   T+A + Q  R          W        PR+ P  
Sbjct: 201 PPNPKAPGRQALQPEA--RRPMGATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPRVPPLG 258

Query: 107 FSVGYVDRFLGVREE-PFSAFCWDQPLAALGPGVLAVPQHRVRFFRFHGRLVWDRASRTD 165
                    L   E  PF   C      A  PGV  VP++ V   RF       RA+   
Sbjct: 259 LQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRY-VGSVRF-------RANGDQ 310

Query: 166 LVFGSGSAAGRGPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRG--STRPLCTGHQ 223
            +  +G +  R  T L AP+  G+  A  A  +  G G +A   P+ G  +  P   G+ 
Sbjct: 311 KLQDAGESLRRSRT-LTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAALPPRLPGYG 369

Query: 224 EPGVEEP 230
             G+  P
Sbjct: 370 ADGLGAP 376


>gi|239743976 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 378

 Score = 36.2 bits (82), Expect = 0.071
 Identities = 53/187 (28%), Positives = 73/187 (39%), Gaps = 32/187 (17%)

Query: 65  PGAPAPPGREA-QPEAGAKKPPLRTAADVIQRIR----------W-------DPRLDPAD 106
           P  P  PGR+A QPEA  ++P   T+A + Q  R          W        PR+ P  
Sbjct: 201 PPNPKAPGRQALQPEA--RRPMGATSAWLDQWKRRKGGTSLLTGWLGTPPPPPPRVPPLG 258

Query: 107 FSVGYVDRFLGVREE-PFSAFCWDQPLAALGPGVLAVPQHRVRFFRFHGRLVWDRASRTD 165
                    L   E  PF   C      A  PGV  VP++ V   RF       RA+   
Sbjct: 259 LQRLAARGVLVCLERWPFCGVCDRDQGGAKSPGVWGVPRY-VGSVRF-------RANGDQ 310

Query: 166 LVFGSGSAAGRGPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRG--STRPLCTGHQ 223
            +  +G +  R  T L AP+  G+  A  A  +  G G +A   P+ G  +  P   G+ 
Sbjct: 311 KLQDAGESLRRSRT-LTAPSPPGSRAAGTAALSAGGPGSQASGGPRPGLAALPPRLPGYG 369

Query: 224 EPGVEEP 230
             G+  P
Sbjct: 370 ADGLGAP 376


>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score = 36.2 bits (82), Expect = 0.071
 Identities = 34/94 (36%), Positives = 36/94 (38%), Gaps = 17/94 (18%)

Query: 6   PCGATSSARRA-------CQFPAPMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGA 58
           P    S ARRA        + P P   A  P  P E P     PPPA R    G CR  A
Sbjct: 17  PHSQVSLARRAPLMFGPGLRDPPPPRPA--PPRPGEEPGNRHPPPPAARTH-PGSCR--A 71

Query: 59  RCRQPHPGA-----PAPPGREAQPEAGAKKPPLR 87
           RC  P  G       A PGR+   E  A   P R
Sbjct: 72  RCPSPAAGGLRGPWTAAPGRQRADEGAAAARPER 105


>gi|46370064 endothelin 3 isoform 1 preproprotein [Homo sapiens]
          Length = 238

 Score = 35.8 bits (81), Expect = 0.093
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 170 SGSAAGRGPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEE 229
           SG A  RG  +  AP    + G    E T+AG G+E  A P  G+  P  T  Q P    
Sbjct: 25  SGDAGRRG--VSQAPTAARSEG--DCEETVAGPGEETVAGPGEGTVAP--TALQGPSPGS 78

Query: 230 PGELEAAQ 237
           PG+ +AA+
Sbjct: 79  PGQEQAAE 86


>gi|46370062 endothelin 3 isoform 3 preproprotein [Homo sapiens]
          Length = 224

 Score = 35.8 bits (81), Expect = 0.093
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 170 SGSAAGRGPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEE 229
           SG A  RG  +  AP    + G    E T+AG G+E  A P  G+  P  T  Q P    
Sbjct: 25  SGDAGRRG--VSQAPTAARSEG--DCEETVAGPGEETVAGPGEGTVAP--TALQGPSPGS 78

Query: 230 PGELEAAQ 237
           PG+ +AA+
Sbjct: 79  PGQEQAAE 86


>gi|46370060 endothelin 3 isoform 2 preproprotein [Homo sapiens]
          Length = 219

 Score = 35.8 bits (81), Expect = 0.093
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 170 SGSAAGRGPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEE 229
           SG A  RG  +  AP    + G    E T+AG G+E  A P  G+  P  T  Q P    
Sbjct: 25  SGDAGRRG--VSQAPTAARSEG--DCEETVAGPGEETVAGPGEGTVAP--TALQGPSPGS 78

Query: 230 PGELEAAQ 237
           PG+ +AA+
Sbjct: 79  PGQEQAAE 86


>gi|4557545 endothelin 3 isoform 1 preproprotein [Homo sapiens]
          Length = 238

 Score = 35.8 bits (81), Expect = 0.093
 Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 170 SGSAAGRGPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEE 229
           SG A  RG  +  AP    + G    E T+AG G+E  A P  G+  P  T  Q P    
Sbjct: 25  SGDAGRRG--VSQAPTAARSEG--DCEETVAGPGEETVAGPGEGTVAP--TALQGPSPGS 78

Query: 230 PGELEAAQ 237
           PG+ +AA+
Sbjct: 79  PGQEQAAE 86


>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
           sapiens]
          Length = 594

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 36/140 (25%), Positives = 49/140 (35%), Gaps = 19/140 (13%)

Query: 201 GTGQEAQAAPKRGSTRPLCTGHQEPGVEEPGELEAAQERAL--------GTAADLGTLAP 252
           G G   QA  + G  R   T H+   ++  GE  A   +A         G  A LG    
Sbjct: 353 GLGVSPQAGARVGEAREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGRGV 412

Query: 253 RGRLA-GVTEEALK---PTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPAAWPEDKRA 308
            G+   G  ++  +   P AA R  L G +  +A    G    +    WGP A       
Sbjct: 413 CGKCGPGPWDDPARRRNPGAAARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSGG 472

Query: 309 RLSVAAP-------CQPRPT 321
           R  V  P         PRP+
Sbjct: 473 RRGVGNPERWGGEAAAPRPS 492


>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
           sapiens]
          Length = 594

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 36/140 (25%), Positives = 49/140 (35%), Gaps = 19/140 (13%)

Query: 201 GTGQEAQAAPKRGSTRPLCTGHQEPGVEEPGELEAAQERAL--------GTAADLGTLAP 252
           G G   QA  + G  R   T H+   ++  GE  A   +A         G  A LG    
Sbjct: 353 GLGVSPQAGARVGEAREAVTTHERAHLDREGEARARLGQAAAQMRREGWGARAKLGGRGV 412

Query: 253 RGRLA-GVTEEALK---PTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPAAWPEDKRA 308
            G+   G  ++  +   P AA R  L G +  +A    G    +    WGP A       
Sbjct: 413 CGKCGPGPWDDPARRRNPGAAARAKLAGQRAGRARARTGSQVGSRGRGWGPGAGRVPSGG 472

Query: 309 RLSVAAP-------CQPRPT 321
           R  V  P         PRP+
Sbjct: 473 RRGVGNPERWGGEAAAPRPS 492


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 20/71 (28%), Positives = 28/71 (39%)

Query: 22  PMAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARCRQPHPGAPAPPGREAQPEAGA 81
           P + A  P LP +  +    PP + R          AR   P P  PAPP     P    
Sbjct: 126 PGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPP 185

Query: 82  KKPPLRTAADV 92
             PPL +++ +
Sbjct: 186 LPPPLPSSSPI 196


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 5   PPCGATSSARRACQF---PAPMAAAREPELPQEAPATEPAPPPACRFFLE--GRCRFGAR 59
           P   A   AR + +F   PAP        L +E P T P PPP     +E  GR  FG  
Sbjct: 414 PTATAAFGARDSGEFRRAPAPPPLPPAEPLAKEKPGTPPGPPPPDTNSMELGGRPTFG-- 471

Query: 60  CRQPHP-GAPAPPGREAQPEAGAKKP 84
              P P  +P  P  E+ P AG +KP
Sbjct: 472 -WSPEPCDSPGTPTLESSP-AGPEKP 495


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 39/115 (33%), Positives = 45/115 (39%), Gaps = 18/115 (15%)

Query: 3   SRPPCGATSSA--RRACQFPAPMAAAR---EPELPQE---APATEPAPPPACRF-----F 49
           SRP    TS A    A Q P+P +A +   EP  P+    A  TEP   P         F
Sbjct: 537 SRPSTPKTSRAVSPAAAQPPSPSSAEKPGDEPGRPRSRGPAGRTEPGEGPQQEVRRRDQF 596

Query: 50  LEGRCRFGARCRQPHPGAPAPPGREAQPEAGAKKPPLRTAADVIQRIRWDPRLDP 104
              R R    CR P P   A P     PEA  K PP R      Q +R+ P   P
Sbjct: 597 PLTRSRAIQECRSPVPPPAADP-----PEARTKAPPGRKREPPAQAVRFLPWATP 646



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 28  EPELPQEAPATEPAPPPACRFFLEGRCRFGARCRQPHPGAPAPPGREAQPEAGAKKPPLR 87
           +P+L  EAP     PPP+    L            P  G  +PPG  AQP A    P  R
Sbjct: 287 QPQLASEAPRRPAQPPPSKSALLPPP--------SPRVGKRSPPGPPAQPAATPTSPHRR 338

Query: 88  TAADVI 93
           T   V+
Sbjct: 339 TQEPVL 344


>gi|223468617 family with sequence similarity 75, member C1 [Homo
           sapiens]
          Length = 1188

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 20/164 (12%)

Query: 251 APRGRLAGVTEEALKPTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPAAWPEDKRARL 310
           A  GR  G T E L P +  R+ L      QA  V     +T+       A P+ ++A +
Sbjct: 584 AHMGRKLGQTNEGLIPVSVRRSWLAVN---QAFPVSNTHVKTSNL-----AAPKSRKACV 635

Query: 311 SVAAPCQPRPTHFVALMVTEPGLQAEVTKAQEYLVHVAPHCANFLVPSQNLHL----TLA 366
           + A     +   F+ L  T+  L+A + +   +  H        L P Q   L    +L+
Sbjct: 636 NTA-----QVLSFLELC-TQQVLEAHIVRF--WAKHRWGLPLRVLKPIQCFQLEKVSSLS 687

Query: 367 LLRLAGAGEEAAAIGALRRALLAPGLNAPPRLSFRKLVLLGPHV 410
           L++LAG   +    GA  +  +A  L  PP  S RK VL  P V
Sbjct: 688 LIQLAGPSSDTCESGAGSKVEVATLLGEPPMASLRKQVLTKPSV 731


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 16/64 (25%)

Query: 28  EPELPQEAPATEPAPPPACRFFLEGRCRFGARCRQPHPGAPAP---PGREAQPEAGAKKP 84
           EP  P  AP+T PAPPPA    L            P P AP P   P  E +PE  A+ P
Sbjct: 507 EPAAPPAAPST-PAPPPAVPKEL------------PAPPAPPPASAPTPETEPEEPAQAP 553

Query: 85  PLRT 88
           P ++
Sbjct: 554 PAQS 557


>gi|46852392 chromobox homolog 6 [Homo sapiens]
          Length = 412

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 35/113 (30%)

Query: 6   PCGATSSARRACQFPAPMAAA--------------------REPE-----LPQEAPATEP 40
           P  A SS    C  P P ++                     REPE     LP E+ AT  
Sbjct: 267 PYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSK 326

Query: 41  APPPACRFFLEGRCRFGARCRQPHPGAPAPPGREAQPEAGAKKPPLRTAADVI 93
             PP             A      P AP P G  ++PEAG  +P +   ++V+
Sbjct: 327 RAPPEVT----------AAAGPAPPTAPEPAGASSEPEAGDWRPEMSPCSNVV 369


>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 446

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 52/194 (26%), Positives = 73/194 (37%), Gaps = 37/194 (19%)

Query: 159 DRASRTDLVFGSGSAAGR------GPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKR 212
           D ASR   +FGS     +      G  +  AP+ E A  AEGA  +     ++ +   + 
Sbjct: 62  DEASR---LFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRART 118

Query: 213 GSTRPLCTGHQEPGVE-EPGELEA-----AQERALGTA-----ADLGTLAPRG----RLA 257
            STR  C    EP +  + G L+        +RAL  +     A L  L+PR     R  
Sbjct: 119 ASTRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGE 178

Query: 258 GVTEEALKPTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPAAWPEDKRARLS------ 311
               E  +  A T +  L   +    G P       E   G AAW  D+ A L+      
Sbjct: 179 ATAREGPREGAPTGSKTLHLPK----GAPNSQVSRGEVMRGAAAWAWDESAPLACLVEPL 234

Query: 312 ---VAAPCQPRPTH 322
              +  PC  R TH
Sbjct: 235 AAILGIPCPRRRTH 248


>gi|239749263 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 16/139 (11%)

Query: 168 FGSGSAAGRGPTILDAPNTEGA----HGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQ 223
           F S S   RG +   + ++  +    H  E  E  L   G    +A +  S R   +G +
Sbjct: 38  FSSPSNPARGNSAASSFSSPSSLQRQHVGEPGEPALPSAGLARPSASQPLSVRAAASGER 97

Query: 224 EPGVEEPGELEAAQERALGTA-----ADLGTLAPRGRLAGVTEEALKPTAA----TRTTL 274
            P V  P +   ++    G+A      D GT   R R+ G+ +  L P AA    TRT+ 
Sbjct: 98  RPHVP-PWDGARSRSWCAGSAWREKAGDSGTGTVRKRVEGLGDGVLLPPAAPTGFTRTST 156

Query: 275 LGGKEAQALGVPGGSAETT 293
                AQALG   GSA  T
Sbjct: 157 CSSMGAQALG--AGSAPGT 173


>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
           sapiens]
          Length = 487

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 52/194 (26%), Positives = 73/194 (37%), Gaps = 37/194 (19%)

Query: 159 DRASRTDLVFGSGSAAGR------GPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKR 212
           D ASR   +FGS     +      G  +  AP+ E A  AEGA  +     ++ +   + 
Sbjct: 62  DEASR---LFGSAVVKAQQVPLSLGGHLRGAPDAEPARPAEGARPSPGTRARKTRPRART 118

Query: 213 GSTRPLCTGHQEPGVE-EPGELEA-----AQERALGTA-----ADLGTLAPRG----RLA 257
            STR  C    EP +  + G L+        +RAL  +     A L  L+PR     R  
Sbjct: 119 ASTRRPCALCPEPALRAQLGRLDRRGPQHRVQRALALSAGLEDAHLPCLSPRPSQEMRGE 178

Query: 258 GVTEEALKPTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPAAWPEDKRARLS------ 311
               E  +  A T +  L   +    G P       E   G AAW  D+ A L+      
Sbjct: 179 ATAREGPREGAPTGSKTLHLPK----GAPNSQVSRGEVMRGAAAWAWDESAPLACLVEPL 234

Query: 312 ---VAAPCQPRPTH 322
              +  PC  R TH
Sbjct: 235 AAILGIPCPRRRTH 248


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,772,803
Number of Sequences: 37866
Number of extensions: 1336557
Number of successful extensions: 9096
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 250
Number of HSP's that attempted gapping in prelim test: 8361
Number of HSP's gapped (non-prelim): 847
length of query: 501
length of database: 18,247,518
effective HSP length: 106
effective length of query: 395
effective length of database: 14,233,722
effective search space: 5622320190
effective search space used: 5622320190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.