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Search of human proteins with 20336330
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens] 688 0.0
gi|100913021 BCL2-like 12 isoform 3 [Homo sapiens] 681 0.0
gi|239753746 PREDICTED: similar to BCL2-like 12 [Homo sapiens] 344 7e-95
gi|239748229 PREDICTED: hypothetical protein XP_002346597 [Homo ... 344 7e-95
gi|239742130 PREDICTED: hypothetical protein XP_002342439 [Homo ... 343 9e-95
gi|21040330 BCL2-like 14 isoform 1 [Homo sapiens] 43 3e-04
gi|21040328 BCL2-like 14 isoform 1 [Homo sapiens] 43 3e-04
gi|60460889 Myb protein P42POP [Homo sapiens] 40 0.004
gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens] 38 0.011
gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens] 38 0.011
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 38 0.014
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 38 0.014
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 37 0.025
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 37 0.032
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 36 0.042
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 36 0.042
gi|194272140 dendrin [Homo sapiens] 36 0.042
gi|110556644 zinc finger protein, multitype 1 [Homo sapiens] 36 0.042
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 35 0.072
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 35 0.094
gi|71999153 hypothetical protein LOC23334 [Homo sapiens] 35 0.094
gi|208431817 protein kinase-like protein SgK493 [Homo sapiens] 35 0.12
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 35 0.12
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 34 0.16
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 34 0.16
gi|24797153 faciogenital dysplasia protein [Homo sapiens] 34 0.16
gi|149393140 hypothetical protein LOC84067 isoform 1 [Homo sapiens] 34 0.16
gi|203096856 kinesin family member 7 [Homo sapiens] 34 0.16
gi|226498192 atonal homolog 8 [Homo sapiens] 34 0.21
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 34 0.21
>gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens]
Length = 334
Score = 688 bits (1775), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 60
MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
Sbjct: 1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 60
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 120
VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR
Sbjct: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 120
Query: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
Sbjct: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
Query: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 240
RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
Sbjct: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 240
Query: 241 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 300
LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL
Sbjct: 241 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 300
Query: 301 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 334
SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD
Sbjct: 301 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 334
>gi|100913021 BCL2-like 12 isoform 3 [Homo sapiens]
Length = 333
Score = 681 bits (1758), Expect = 0.0
Identities = 333/334 (99%), Positives = 333/334 (99%), Gaps = 1/334 (0%)
Query: 1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 60
MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF
Sbjct: 1 MGRPAGLFPPLCPFLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKF 60
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 120
VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP
Sbjct: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP- 119
Query: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ
Sbjct: 120 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 179
Query: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 240
RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR
Sbjct: 180 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 239
Query: 241 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 300
LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL
Sbjct: 240 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 299
Query: 301 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 334
SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD
Sbjct: 300 SVEHVHSFTPWIQAHGGWEGILAVSPVDLNLPLD 333
>gi|239753746 PREDICTED: similar to BCL2-like 12 [Homo sapiens]
Length = 218
Score = 344 bits (882), Expect = 7e-95
Identities = 186/257 (72%), Positives = 191/257 (74%), Gaps = 46/257 (17%)
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 120
V V+WRR QVE RR +WGP GASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVP PPR
Sbjct: 4 VGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPR 63
Query: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP SLPIRPCYG EPGPATPDFYALVAQ
Sbjct: 64 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQ 123
Query: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 240
RLEQ QEQLKSPP SK +
Sbjct: 124 RLEQ--QEQLKSPP-----------------------------------------SKRIS 140
Query: 241 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 300
L+S FARLVELFCSR+DSSRPSRACPG PPPS EP LALAMELSRRVA LG T AGL
Sbjct: 141 LASGFFARLVELFCSREDSSRPSRACPGSPPPSQEP---LALAMELSRRVAELGDTRAGL 197
Query: 301 SVEHVHSFTPWIQAHGG 317
SVEH HS TPWIQAHGG
Sbjct: 198 SVEHAHSLTPWIQAHGG 214
>gi|239748229 PREDICTED: hypothetical protein XP_002346597 [Homo
sapiens]
Length = 218
Score = 344 bits (882), Expect = 7e-95
Identities = 186/257 (72%), Positives = 191/257 (74%), Gaps = 46/257 (17%)
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 120
V V+WRR QVE RR +WGP GASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVP PPR
Sbjct: 4 VGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPR 63
Query: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP SLPIRPCYG EPGPATPDFYALVAQ
Sbjct: 64 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQ 123
Query: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 240
RLEQ QEQLKSPP SK +
Sbjct: 124 RLEQ--QEQLKSPP-----------------------------------------SKRIS 140
Query: 241 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 300
L+S FARLVELFCSR+DSSRPSRACPG PPPS EP LALAMELSRRVA LG T AGL
Sbjct: 141 LASGFFARLVELFCSREDSSRPSRACPGSPPPSQEP---LALAMELSRRVAELGDTRAGL 197
Query: 301 SVEHVHSFTPWIQAHGG 317
SVEH HS TPWIQAHGG
Sbjct: 198 SVEHAHSLTPWIQAHGG 214
>gi|239742130 PREDICTED: hypothetical protein XP_002342439 [Homo
sapiens]
Length = 218
Score = 343 bits (881), Expect = 9e-95
Identities = 186/257 (72%), Positives = 191/257 (74%), Gaps = 46/257 (17%)
Query: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 120
V V+WRR QVE RR +WGP GASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVP PPR
Sbjct: 4 VGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPR 63
Query: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
S AQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP SLPIRPCYG EPGPATPDFYALVAQ
Sbjct: 64 SHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQ 123
Query: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 240
RLEQ QEQLKSPP SK +
Sbjct: 124 RLEQ--QEQLKSPP-----------------------------------------SKRIS 140
Query: 241 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 300
L+S FARLVELFCSR+DSSRPSRACPGPPPPS EP LALAMELSRRVA LG T AGL
Sbjct: 141 LASGFFARLVELFCSREDSSRPSRACPGPPPPSQEP---LALAMELSRRVAELGDTRAGL 197
Query: 301 SVEHVHSFTPWIQAHGG 317
SVEH HS TPWIQAHGG
Sbjct: 198 SVEHAHSLTPWIQAHGG 214
>gi|21040330 BCL2-like 14 isoform 1 [Homo sapiens]
Length = 327
Score = 43.1 bits (100), Expect = 3e-04
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 16/137 (11%)
Query: 196 PELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLV--ELF 253
P E+E IL ++V LL+ + + +KL D AL S S + + ++
Sbjct: 195 PVASSSKKDEEEQILAKIVELLKYSGDQLERKLKKDKALMGHFQDGLSYSVFKTITDQVL 254
Query: 254 CSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGG----TLAGLSVEHV-HSF 308
D G + AL ++++ ++ + + G +++ +F
Sbjct: 255 MGVDPRGESEVKAQG---------FKAALVIDVTAKLTAIDNHPMNRVLGFGTKYLKENF 305
Query: 309 TPWIQAHGGWEGILAVS 325
+PWIQ HGGWE IL +S
Sbjct: 306 SPWIQQHGGWEKILGIS 322
>gi|21040328 BCL2-like 14 isoform 1 [Homo sapiens]
Length = 327
Score = 43.1 bits (100), Expect = 3e-04
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 16/137 (11%)
Query: 196 PELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLV--ELF 253
P E+E IL ++V LL+ + + +KL D AL S S + + ++
Sbjct: 195 PVASSSKKDEEEQILAKIVELLKYSGDQLERKLKKDKALMGHFQDGLSYSVFKTITDQVL 254
Query: 254 CSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGG----TLAGLSVEHV-HSF 308
D G + AL ++++ ++ + + G +++ +F
Sbjct: 255 MGVDPRGESEVKAQG---------FKAALVIDVTAKLTAIDNHPMNRVLGFGTKYLKENF 305
Query: 309 TPWIQAHGGWEGILAVS 325
+PWIQ HGGWE IL +S
Sbjct: 306 SPWIQQHGGWEKILGIS 322
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 39.7 bits (91), Expect = 0.004
Identities = 59/235 (25%), Positives = 80/235 (34%), Gaps = 46/235 (19%)
Query: 78 GPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSPAQEEPTDFLSRLRRC 137
G GP A A S E E+T+ + AG+ PP +P+ + P R
Sbjct: 100 GAGPAAEDAFSAE----EETIFAILGPGVAAPGAGAGAEEPPAAPSSQPPPPSACPQRYV 155
Query: 138 L-----------------------------PCSLGRGAAP----SESPRPCSL-PIR-PC 162
L C+ G P ESP P +L P++ P
Sbjct: 156 LSEDRREDRRADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERESPPPSALQPVQLPR 215
Query: 163 YGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAE 222
L P P P L Q+ PP P + PP+ + +E A
Sbjct: 216 LALSPPPPAPPLPP--PPPLAQVAPSPPSPPPPP--RPPPTLSASDPSLDFLRAQQETAN 271
Query: 223 VINQKLASDPALRSKLVRLSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPL 277
I + + LR L +LS A L L + DS P P PPPP P P+
Sbjct: 272 AIRELAGT---LRQGLAKLSEALSALLPLLPGTPVDSLPPPLPPPPPPPPPPRPV 323
>gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens]
Length = 309
Score = 38.1 bits (87), Expect = 0.011
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 23/100 (23%)
Query: 119 PRSPAQEEPTDFLSRLRRCLP-CSLGRGAAPSESP---------------RPCSLPIRPC 162
P PA+ +SRLRRC CS GRG SP P +LP P
Sbjct: 111 PPGPAE------VSRLRRCRKRCSEGRGPTTPFSPPPPADVTCFPVEEASAPATLPASPA 164
Query: 163 YGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPP 202
LEPG ++P F L+ Q + + PSPE Q P
Sbjct: 165 GRLEPGLSSP-FSDLLGPLGAQADEAGCSAQPSPERQPSP 203
>gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens]
Length = 309
Score = 38.1 bits (87), Expect = 0.011
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 23/100 (23%)
Query: 119 PRSPAQEEPTDFLSRLRRCLP-CSLGRGAAPSESP---------------RPCSLPIRPC 162
P PA+ +SRLRRC CS GRG SP P +LP P
Sbjct: 111 PPGPAE------VSRLRRCRKRCSEGRGPTTPFSPPPPADVTCFPVEEASAPATLPASPA 164
Query: 163 YGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPP 202
LEPG ++P F L+ Q + + PSPE Q P
Sbjct: 165 GRLEPGLSSP-FSDLLGPLGAQADEAGCSAQPSPERQPSP 203
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 37.7 bits (86), Expect = 0.014
Identities = 39/105 (37%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 148 PSESPRPCSLPI-RPCYGLEPGPA-TPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTE 205
PS+ P PCS P P P PA TP Q L +P SP L GPPS
Sbjct: 2488 PSQIP-PCSSPACTPPPACTPPPAHTPP-----------PAQTCLVTPSSPLLLGPPSVP 2535
Query: 206 KEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSFARLV 250
A + L L EAE+ Q LAS +L V S S LV
Sbjct: 2536 ISASVTNLPLGLRPEAELCAQALASPESLELASVASSETSSLSLV 2580
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 37.7 bits (86), Expect = 0.014
Identities = 60/226 (26%), Positives = 83/226 (36%), Gaps = 38/226 (16%)
Query: 80 GPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSPAQEEPTDFLSRLRRCLP 139
GP A GS +D+ V +A L + A P P P R P + TD
Sbjct: 1031 GPRAQSPGSPLHARGQDSWPVSSALLSKRPAPQRP-PPPKREPRRYRATDGAPA-----D 1084
Query: 140 CSLGRGAAPSESPRPCSLPIRPC-YGLEPGPA---------TPDFYALVAQRLEQLVQEQ 189
+G P +P P SL + L P+ TP A V +R Q V
Sbjct: 1085 APVGVLGRPFPTPSPASLDVYVARLSLSHSPSVFSSAQPQDTPK--ATVCERGSQHVSGD 1142
Query: 190 LKSPPSPELQGPPSTEKEAILRRLVALLEEEA----EVINQKLASDPAL------RSKLV 239
S P PE PP K+ LR A +E + QKL P L +++
Sbjct: 1143 A-SRPLPEALLPP---KQQHLRLQTATMETSRSPSPQFAPQKLTDKPPLLIQDEDSTRIE 1198
Query: 240 RLSSDSFA------RLVELFCSRDDSSRPSRACPGPPPPSPEPLAR 279
R+ ++ ++V + SR S ACP PP P L +
Sbjct: 1199 RVMDNNTTVKMVPIKIVHSESQPEKESRQSLACPAEPPALPHGLEK 1244
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 37.0 bits (84), Expect = 0.025
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 165 LEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVI 224
L P T D + + LE L++E+ G EKE ++ R+ ++ EE+ ++
Sbjct: 1932 LNKSPKTRD---IQEEELEVLLEEEAAG-------GDEDREKEILIERIQSIKEEKEDIT 1981
Query: 225 NQKLASDP--ALRSKLVRLSSDSFARLVELFCSRDDSS---RPSRACPGPPPPSPEP 276
+ DP + L +S S L+E R S P+ CPG P PSP P
Sbjct: 1982 YRLPELDPRGSDEENLDSETSASTESLLEERAGRGASEGPPAPALPCPGAPTPSPLP 2038
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 36.6 bits (83), Expect = 0.032
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Query: 110 AAGSPVPTPPR---SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLE 166
A +P P PP SPA+ EP + R SL R A +P + L
Sbjct: 673 APEAPEPEPPPADDSPAEPEPR----AVGRTNHLSLPRFAPVVTTPVKAEVSPHGAPALS 728
Query: 167 PGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEK 206
GP T Q L+ + Q PP P+LQ PPS ++
Sbjct: 729 NGPQTQAQLLQPLQALQTQLLPQALPPPQPQLQPPPSPQQ 768
Score = 35.4 bits (80), Expect = 0.072
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 48/217 (22%)
Query: 113 SPVPTPPRSPAQ---------------EEPTDFLSRLRRCL---PCSLGRGAAPSESPRP 154
+PVP+PPR+P EPT + L R L P + APS P P
Sbjct: 578 APVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPSPPPAP 637
Query: 155 CSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPS------TEKEA 208
+ RP P + + + + + L L +P +PE + PP+ E A
Sbjct: 638 ATSSRRPLLLRAPQFTPSEAHLKIYESV--LTPPPLGAPEAPEPEPPPADDSPAEPEPRA 695
Query: 209 ILRRLVALLEEEAEVINQKLASD------PALRSKLVRLSSDSFARLVELFCSRDDSSRP 262
+ R L A V+ + ++ PAL + + A+L++ + P
Sbjct: 696 VGRTNHLSLPRFAPVVTTPVKAEVSPHGAPALSN-----GPQTQAQLLQPLQALQTQLLP 750
Query: 263 SRACPGP-----PPPSPEPLARLALAMELSRRVAGLG 294
+A P P PPPSP+ + L A R+AG+G
Sbjct: 751 -QALPPPQPQLQPPPSPQQMPPLEKA-----RIAGVG 781
Score = 30.8 bits (68), Expect = 1.8
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 14/135 (10%)
Query: 78 GPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSP--AQEEPTDFL---S 132
GP P + ++ L +V GE PV PP P + PT +
Sbjct: 2178 GPAPEPPKPATSKIILVNKLGQVFVKMAGEGEPVPPPVKQPPLPPTISPTAPTSWTLPPG 2237
Query: 133 RLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKS 192
L LP AP P P +L L GPA+P A+ R++++ +S
Sbjct: 2238 PLLGVLPVVGVVRPAPPPPPPPLTLV------LSSGPASPPRQAI---RVKRVSTFSGRS 2288
Query: 193 PPSPELQGPPSTEKE 207
PP+P P +++
Sbjct: 2289 PPAPPPYKAPRLDED 2303
Score = 29.3 bits (64), Expect = 5.2
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 116 PTPPRSPAQEEPTDFLSRLRRCLPCSLGRGAAP-SESPRPC--SLPIRPCYGLEPG-PAT 171
PTPP++PA++ + R+ + L L R AP + R C S P R G PG PA
Sbjct: 171 PTPPKTPARKRGEEGTERMVQALTELLRRAQAPQAPRSRACEPSTP-RRSRGRPPGRPAG 229
Query: 172 PDFYALVAQRLEQ--LVQEQLKSPPSPELQGP 201
P +R +Q +V E + P PE P
Sbjct: 230 P------CRRKQQAVVVAEAAVTIPKPEPPPP 255
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 36.2 bits (82), Expect = 0.042
Identities = 45/153 (29%), Positives = 52/153 (33%), Gaps = 34/153 (22%)
Query: 31 RAPSVPPFLRWAGYRPGPVRRRGKVELIKFVRVQWRRPQVEWRRRRWGPGPGASMAGSEE 90
R P + AG R G R R QV R R WGPG G +G
Sbjct: 428 RNPGAAARAKLAGQRAGRARAR-------------TGSQVGSRGRGWGPGAGRVPSGGRR 474
Query: 91 -LGLREDTLRVLAAFLRRGEAAGSPVPT-------PPRSPAQE---EPTDFLSRLRRCLP 139
+G E R G A +P P+ P PA++ EP R
Sbjct: 475 GVGNPE----------RWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGR 524
Query: 140 CSLGRGAAPSESPRPCSLPIRPCYGLEPGPATP 172
G GA PS P P P G PGP TP
Sbjct: 525 VGKGPGAPPSALPGPRPRPDSLSPGEPPGPPTP 557
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 36.2 bits (82), Expect = 0.042
Identities = 45/153 (29%), Positives = 52/153 (33%), Gaps = 34/153 (22%)
Query: 31 RAPSVPPFLRWAGYRPGPVRRRGKVELIKFVRVQWRRPQVEWRRRRWGPGPGASMAGSEE 90
R P + AG R G R R QV R R WGPG G +G
Sbjct: 428 RNPGAAARAKLAGQRAGRARAR-------------TGSQVGSRGRGWGPGAGRVPSGGRR 474
Query: 91 -LGLREDTLRVLAAFLRRGEAAGSPVPT-------PPRSPAQE---EPTDFLSRLRRCLP 139
+G E R G A +P P+ P PA++ EP R
Sbjct: 475 GVGNPE----------RWGGEAAAPRPSRVLLPELPAVDPARDTRREPDAAAQRTELGGR 524
Query: 140 CSLGRGAAPSESPRPCSLPIRPCYGLEPGPATP 172
G GA PS P P P G PGP TP
Sbjct: 525 VGKGPGAPPSALPGPRPRPDSLSPGEPPGPPTP 557
>gi|194272140 dendrin [Homo sapiens]
Length = 711
Score = 36.2 bits (82), Expect = 0.042
Identities = 46/175 (26%), Positives = 62/175 (35%), Gaps = 14/175 (8%)
Query: 40 RWAGYRPG---PVRRRGKVELIKFVRVQWRR-PQVEWRRRRWGPGPGASMAGSEELGLRE 95
R G RPG P RR + WR P E R R A S+E +E
Sbjct: 69 RTCGPRPGSPQPPPRRPWASRVLQEATNWRAGPLAEVRARE----QEKRKAASQEREAKE 124
Query: 96 DTLRVLAAFLRRGEAAGSPVPTPPRSPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPR-- 153
+ A R G P P P +P + + LR +GR PS P+
Sbjct: 125 TERKRRKAGGARRSPPGRPRPEPRNAPRVAQLAGLPAPLRPERLAPVGRAPRPSAQPQSD 184
Query: 154 PCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPP----SPELQGPPST 204
P S P G PGP + + + L+ + + PP P +GP T
Sbjct: 185 PGSAWAGPWGGRRPGPPSYEAHLLLRGSAGTAPRRRWDRPPPYVAPPSYEGPHRT 239
>gi|110556644 zinc finger protein, multitype 1 [Homo sapiens]
Length = 1006
Score = 36.2 bits (82), Expect = 0.042
Identities = 37/113 (32%), Positives = 45/113 (39%), Gaps = 21/113 (18%)
Query: 79 PGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTP-PRSPAQEEPTDFLSRLRRC 137
PGP A A S +R R L AAG+P P P +PA E P R
Sbjct: 724 PGPAAPPAPSPAAPVRTRRRRKLYEL----HAAGAPPPPPPGHAPAPESP-------RPG 772
Query: 138 LPCSLGRGAAPSESPRPCS--------LPIRPCYGLEPGPATPDFYALVAQRL 182
G G AP+ SP P + P RP G P PA D++ A R+
Sbjct: 773 SGSGSGPGLAPARSPGPAADGPIDLSKKPRRPLPG-APAPALADYHECTACRV 824
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 35.4 bits (80), Expect = 0.072
Identities = 64/238 (26%), Positives = 74/238 (31%), Gaps = 50/238 (21%)
Query: 73 RRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSP------------VPTPPR 120
RR G GP A+ A G R LA R G G P P P
Sbjct: 144 RRLPGGRGPAAAFAVEPGTGQRPRNTS-LAQASRSGTVPGLPPASLQPLRLPYLAPPGPH 202
Query: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
P P RL C P PS P P R + L P P V
Sbjct: 203 DPTSRGP----GRLLTCEP--------PSRKLPPPLPPCRSRWVLAPPPT-------VRP 243
Query: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVI---NQKLASDPALRSK 237
RL L PE + + A+L VA L E + + S P
Sbjct: 244 RLRVLTPPLALRRALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHP----- 298
Query: 238 LVRLSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPE-------PLARLALAMELSR 288
LSS+ A FCS D RP P P P + L R ALA+ R
Sbjct: 299 ---LSSERQAAPTRAFCSADPLPRPPSFVPSLPSPQAQGQAVRQPRLLRAALALGAPR 353
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 35.0 bits (79), Expect = 0.094
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 190 LKSP-PSPELQGPPSTEKEAILRRLVALLEEEAEVINQKL----ASDPALRSKLVRLSSD 244
L SP P E GPPST +EA L+ + L+EEEA ++ +K+ + L+++L L D
Sbjct: 567 LDSPLPKGEAGGPPST-REAELKLRLRLVEEEANILGRKIVELEVENRGLKAELDDLRGD 625
Query: 245 SF 246
F
Sbjct: 626 DF 627
>gi|71999153 hypothetical protein LOC23334 [Homo sapiens]
Length = 2533
Score = 35.0 bits (79), Expect = 0.094
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 141 SLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQG 200
+LG A + P P +P PGP PDF+ L+ + L+ V+ + G
Sbjct: 985 TLGEKAPFTLRTPPGPAPPQPSLSGLPGPCLPDFW-LIVRVLQDRVEVYAHARSLIREDG 1043
Query: 201 PPSTEKEAILRRLVALLEEEAEVINQKLA-----SDPALRSKLVRLSSDSFARLVELFCS 255
P TE + + LV + E +NQ+L S LV S + R F S
Sbjct: 1044 GPGTECRHLQQLLVRRVGEICREVNQRLLLQDLHDSHVCNSLLVAESEEDLWRSETPFHS 1103
Query: 256 RDDSSRPS 263
R + PS
Sbjct: 1104 RQRAPLPS 1111
>gi|208431817 protein kinase-like protein SgK493 [Homo sapiens]
Length = 493
Score = 34.7 bits (78), Expect = 0.12
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 46 PGPVRRRGKVELIKFVRVQWRRPQVEWRRRRWGPGPGA 83
PGP RR G+ EL + +R ++ Q R R GPGPGA
Sbjct: 45 PGPGRRGGRGELARQIRARYEEVQ---RYSRGGPGPGA 79
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 34.7 bits (78), Expect = 0.12
Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 22/135 (16%)
Query: 101 LAAFLRRGEAAGSPVPTPP-----RSPAQEEPTDFLSRLRRCLPCSLGRGA----APSES 151
LA F G A+ P PP PA P L+ P + G+ AP
Sbjct: 1558 LALFNGSGRASPPSTPPPPPPPPGPPPAPYRPCAHLAFPPEPAPVNAGKAGPSAEAPKVH 1617
Query: 152 PRPCSLPIR-PCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAIL 210
P+P S P+ PC P +P + A R + SPP+P PPS+
Sbjct: 1618 PKPNSAPVAGPCSSFPKIPYSP----VKATRADARKAGSSASPPAP--YSPPSS------ 1665
Query: 211 RRLVALLEEEAEVIN 225
R L + L+E A + N
Sbjct: 1666 RPLSSPLDELASLFN 1680
Score = 30.8 bits (68), Expect = 1.8
Identities = 60/209 (28%), Positives = 75/209 (35%), Gaps = 32/209 (15%)
Query: 108 GEAAGSPVPTPPRSPAQEEPTDFLSRLRRCLPCSLGRGAAP-----SESPRPCSLPIRPC 162
G AA P P S +E ++ CLP G GA + P P
Sbjct: 1417 GHAARPDSPDPGESVYEE--------MKCCLPDDGGPGAGSFLLHGASPPLLHRAPEDEA 1468
Query: 163 YGLEPGPAT---PDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEA--ILRRLVALL 217
G PG A P F L+ R LV PP+P P S E + + + +L
Sbjct: 1469 AG-PPGDACDIPPPFPNLLPHRPPLLV-----FPPTPVTCSPASDESPLTPLEVKKLPVL 1522
Query: 218 EEEAEVINQKLASDPALR--SKLVRLSSDSFARL-VELFCSRDDSSRPSRACPGPPPPSP 274
E + Q S P SK + D A + LF +S PS P PPPP P
Sbjct: 1523 ETNLKYPVQPEGSSPLSPQYSKSQKGDGDRPASPGLALFNGSGRASPPSTPPPPPPPPGP 1582
Query: 275 -----EPLARLALAMELSRRVAGLGGTLA 298
P A LA E + AG G A
Sbjct: 1583 PPAPYRPCAHLAFPPEPAPVNAGKAGPSA 1611
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 34.3 bits (77), Expect = 0.16
Identities = 32/123 (26%), Positives = 43/123 (34%), Gaps = 26/123 (21%)
Query: 79 PGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSPAQEEPTDFLSRLRRCL 138
P P A+ L TL+ +FL P+PP SP P
Sbjct: 355 PSPPATPPSQATTSLGSPTLQATHSFL----------PSPPLSPLATPPPQ--------A 396
Query: 139 PCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPEL 198
P +L + P S P+ P P P P+ A+ L+Q PPSP +
Sbjct: 397 PPALALPPLQAPPSPPASPPLSPL--ATPSPQAPNALAV------HLLQAPFSPPPSPPV 448
Query: 199 QGP 201
Q P
Sbjct: 449 QAP 451
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 34.3 bits (77), Expect = 0.16
Identities = 32/123 (26%), Positives = 43/123 (34%), Gaps = 26/123 (21%)
Query: 79 PGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSPAQEEPTDFLSRLRRCL 138
P P A+ L TL+ +FL P+PP SP P
Sbjct: 316 PSPPATPPSQATTSLGSPTLQATHSFL----------PSPPLSPLATPPPQ--------A 357
Query: 139 PCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPEL 198
P +L + P S P+ P P P P+ A+ L+Q PPSP +
Sbjct: 358 PPALALPPLQAPPSPPASPPLSPL--ATPSPQAPNALAV------HLLQAPFSPPPSPPV 409
Query: 199 QGP 201
Q P
Sbjct: 410 QAP 412
>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
Length = 961
Score = 34.3 bits (77), Expect = 0.16
Identities = 44/183 (24%), Positives = 61/183 (33%), Gaps = 56/183 (30%)
Query: 114 PVPTPPRSPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPI-------------- 159
P+P PP P +P + +G AP P S +
Sbjct: 179 PIPPPPSRPLPADPR-------------VAKGLAPRAEASPSSAAVSSLIEKFEREPVIV 225
Query: 160 ---RPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVAL 216
RP G PGP P ++ + PP P+L P E L L
Sbjct: 226 ASDRPVPGPSPGPPEP-----------VMLPQPTSQPPVPQL---PEGEASRCLFLLAPG 271
Query: 217 LEEEAEVINQKLASDPALRSKLVRLSSDSFARLVELFCSRDDSSRPSRA-CPGPPPPSPE 275
+ +V N+ D +SS S + E C D PS + CPGPP +
Sbjct: 272 PRDGEKVPNRDSGIDS--------ISSPSNS---EETCFVSDDGPPSHSLCPGPPALASV 320
Query: 276 PLA 278
P+A
Sbjct: 321 PVA 323
Score = 32.7 bits (73), Expect = 0.47
Identities = 56/232 (24%), Positives = 79/232 (34%), Gaps = 45/232 (19%)
Query: 79 PGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSPAQEEPTDFLSRLRRCL 138
PG + G E L RRG + P P+ + + + R L
Sbjct: 23 PGAAPPACADSDPGASEPGL-----LARRGSGSALGGPLDPQFVGPSDTSLGAAPGHRVL 77
Query: 139 PCSLGRGAAPSE-------------SPRPC----------SLPIRPCYGLEPGPATPDFY 175
PC G +P PRP SL + P LEP P P
Sbjct: 78 PC----GPSPQHHRALRFSYHLEGSQPRPGLHQGNRILVKSLSLDPGQSLEPHPEGPQRL 133
Query: 176 ALVAQRLEQLVQEQ---LKSPPSPELQGPPSTEKEAILR--RLVALLEEEAEVINQKLAS 230
+ ++ LK P P+ Q PP K + L+ R+ LE ++ L +
Sbjct: 134 RSDPGPPTETPSQRPSPLKRAPGPKPQVPP---KPSYLQMPRMPPPLEPIPPPPSRPLPA 190
Query: 231 DPALRSKLVRL-----SSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPL 277
DP + L SS + + L+E F R PGP P PEP+
Sbjct: 191 DPRVAKGLAPRAEASPSSAAVSSLIEKFEREPVIVASDRPVPGPSPGPPEPV 242
>gi|149393140 hypothetical protein LOC84067 isoform 1 [Homo sapiens]
Length = 986
Score = 34.3 bits (77), Expect = 0.16
Identities = 45/155 (29%), Positives = 52/155 (33%), Gaps = 48/155 (30%)
Query: 14 FLGFRPEACWERHMQIERAPSVPPFLRWAGYRPGPVRRRGKVELIKFVRVQWRRPQVEWR 73
FL P C RH +P P WA R GP R G+ E I
Sbjct: 453 FLSLIPRCC--RHHA--PSPPRPEHASWA--RGGPSRETGRREDIT-------------- 492
Query: 74 RRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSPAQEEPTDFLSR 133
GPG + + S R T LA FLR+ GS P P
Sbjct: 493 ----GPGSPSVDSSSVTTVPRPSTPSRLALFLRQQSLGGSESPGP--------------- 533
Query: 134 LRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPG 168
PCS G A+P+ SP RP EPG
Sbjct: 534 ----APCSPGLSASPASSPGR-----RPTPAEEPG 559
Score = 32.7 bits (73), Expect = 0.47
Identities = 65/249 (26%), Positives = 86/249 (34%), Gaps = 48/249 (19%)
Query: 80 GPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSPAQEEPTDFLSRLRRCLP 139
G MAG E G LR L L G GS P P P +EE
Sbjct: 677 GISEGMAGLEGFG---QELRELEVALSNG-GTGSESPLEPPLPLEEEEA------YESFT 726
Query: 140 CSLGRGAAPSESPRP-CSLPIRPCYGLEPGPATPDFYALVAQRLEQLVQE---------- 188
C P E P P S P+R L P T F A++ +LE ++Q
Sbjct: 727 C-------PPEPPGPFLSSPLRTLNQLPSQPFTGPFMAVLFAKLENMLQNSVYVNFLLTG 779
Query: 189 ---QLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDS 245
QL P P L+ + +LL+ V N K+ + A + L S +
Sbjct: 780 LVAQLACHPQPLLRSFLLNTNMVFQPSVKSLLQVLGSVKN-KIENFAASQEDFPALLSKA 838
Query: 246 FARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGLSVEHV 305
L+ +R GP P +PL + SRR +L L + H
Sbjct: 839 KKYLI----ARGKLDWAEGPAAGPAPRRSDPLVK-------SRR-----PSLGELLLRHA 882
Query: 306 HSFTPWIQA 314
HS T QA
Sbjct: 883 HSPTRARQA 891
>gi|203096856 kinesin family member 7 [Homo sapiens]
Length = 1343
Score = 34.3 bits (77), Expect = 0.16
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 182 LEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRL 241
L+Q +++ L+ + E G ++EAIL + AL++E+ + +++L S AL +VR+
Sbjct: 915 LDQEMEKVLQQRRALEELGEELHKREAILAKKEALMQEKTGLESKRLRSSQALNEDIVRV 974
Query: 242 SS 243
SS
Sbjct: 975 SS 976
Score = 29.3 bits (64), Expect = 5.2
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 187 QEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVRLSSDSF 246
Q QL+ ELQ + RR VA + + +V+ +K + +LV LS+ S
Sbjct: 763 QRQLRELEGKELQDAGERSRLQEFRRRVAAAQSQVQVLKEKKQA----TERLVSLSAQSE 818
Query: 247 ARLVEL 252
RL EL
Sbjct: 819 KRLQEL 824
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 33.9 bits (76), Expect = 0.21
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 34/189 (17%)
Query: 108 GEAAGSPVPTPPRSPAQEEP----------TDFLSRLRRCLPCSLGRGAAPSESPRPCSL 157
G +P P PP +P + P R+ C P + +AP P P
Sbjct: 118 GPGLPTPPPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPES 177
Query: 158 PIRPCYGLEPGPATPDFYALVAQRLEQLVQEQLKSP-PSPELQGPPSTEKEAI--LRRLV 214
+RP PG ++ Y+ ++ + Q+ SP P S+E +A+ RRL+
Sbjct: 178 TVRPAPPTRPGESS---YSSISHVIYNNHQDSSASPRKRPGEATAASSEIKALQQTRRLL 234
Query: 215 ALLEEEAEVINQKLASDPALRSK--------------LVRLSSD---SFARLVELFCSRD 257
A E V A + ALR + ++R++ + S ARL +L S D
Sbjct: 235 ANARERTRVHTISAAFE-ALRKQVPCYSYGQKLSKLAILRIACNYILSLARLADLDYSAD 293
Query: 258 DSSRPSRAC 266
S+ C
Sbjct: 294 HSNLSFSEC 302
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 33.9 bits (76), Expect = 0.21
Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 21/95 (22%)
Query: 129 DFLSRLRRCLP------CSLGRGAAPSESPR--PC-----------SLPIRPCYGLE--P 167
D+ + + LP S G G +PS SPR PC SLPIRP P
Sbjct: 1017 DYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTP 1076
Query: 168 GPATPDFYALVAQRLEQLVQEQLKSPPSPELQGPP 202
GP + + AQ L Q+ P P+ PP
Sbjct: 1077 GPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPP 1111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,943,525
Number of Sequences: 37866
Number of extensions: 1115356
Number of successful extensions: 8661
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 262
Number of HSP's that attempted gapping in prelim test: 7983
Number of HSP's gapped (non-prelim): 937
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.