Guide to the Human Genome
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Name: BCL2L12 Sequence: fasta or formatted (333aa) NCBI GI: 100913021
Description:

BCL2-like 12 isoform 3

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [334aa] BCL2-like 12 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         30           2
 C cysteine            2.4          8           1
 D aspartate           2.7          9           2
 E glutamate           8.1         27           3
 F phenylalanine       3.3         11           1
 G glycine             7.8         26           2
 H histidine           1.2          4           1
 I isoleucine          2.1          7           1
 K lysine              1.8          6           1
 L leucine            12.6         42           2
 M methionine          1.2          4           1
 N asparagine          0.6          2           1
 P proline            13.5         45           4
 Q glutamine           3.3         11           1
 R arginine           11.4         38           4
 S serine              8.1         27           2
 T threonine           2.1          7           1
 V valine              5.7         19           1
 W tryptophan          2.1          7           1
 Y tyrosine            0.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-like 12 isoform 3 
BCL2L12               0.992   BCL2-like 12 isoform 1 
LOC100292964          0.472   PREDICTED: similar to BCL2-like 12 
LOC100290718          0.472   PREDICTED: hypothetical protein XP_002346597 
LOC100289095          0.472   PREDICTED: hypothetical protein XP_002342439 
BCL2L14               0.027   BCL2-like 14 isoform 1 
BCL2L14               0.027   BCL2-like 14 isoform 1 
THAP7                 0.026   THAP domain containing 7 isoform 2 
THAP7                 0.026   THAP domain containing 7 isoform 1 
ZFPM1                 0.021   zinc finger protein, multitype 1 
SHROOM2               0.021   apical protein of Xenopus-like 
MYPOP                 0.020   Myb protein P42POP 
SRCAP                 0.020   Snf2-related CBP activator protein 
DMWD                  0.018   dystrophia myotonica-containing WD repeat motif prot...
MYO9B                 0.018   myosin IXB isoform 1 
MLL4                  0.018   myeloid/lymphoid or mixed-lineage leukemia 4 
C7orf51               0.017   hypothetical protein FLJ37538 
LOC100290946          0.015   PREDICTED: hypothetical protein XP_002347121 
LOC100288840          0.015   PREDICTED: hypothetical protein XP_002344246 
C6orf174              0.015   hypothetical protein LOC387104 
LOC100292727          0.015   PREDICTED: hypothetical protein 
KIAA0467              0.015   hypothetical protein LOC23334 
MYO16                 0.015   myosin heavy chain Myr 8 
SGK493                0.015   protein kinase-like protein SgK493 
FAM160A2              0.015   hypothetical protein LOC84067 isoform 1 
SIT1                  0.014   SHP2-interacting transmembrane adaptor protein 
CROCC                 0.014   ciliary rootlet coiled-coil 
KIF7                  0.014   kinesin family member 7 
MXRA7                 0.014   transmembrane anchor protein 1 isoform 3 
MXRA7                 0.014   transmembrane anchor protein 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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