Guide to the Human Genome
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Name: RPS6KA6 Sequence: fasta or formatted (745aa) NCBI GI: 7657526
Description:

ribosomal protein S6 kinase polypeptide 6

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         50           2
 C cysteine            1.3         10           1
 D aspartate           6.6         49           2
 E glutamate           7.1         53           2
 F phenylalanine       5.0         37           2
 G glycine             7.1         53           3
 H histidine           3.0         22           2
 I isoleucine          5.0         37           2
 K lysine              7.4         55           2
 L leucine            10.1         75           3
 M methionine          3.1         23           1
 N asparagine          3.4         25           1
 P proline             4.8         36           2
 Q glutamine           3.6         27           2
 R arginine            4.4         33           2
 S serine              6.0         45           2
 T threonine           4.6         34           2
 V valine              6.6         49           2
 W tryptophan          0.9          7           2
 Y tyrosine            3.4         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S6 kinase polypeptide 6 
RPS6KA3               0.760   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA2               0.732   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.730   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA1               0.716   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.713   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA5               0.349   ribosomal protein S6 kinase, polypeptide 5 isoform a...
RPS6KA4               0.334   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
RPS6KA4               0.334   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
RPS6KA5               0.264   ribosomal protein S6 kinase, polypeptide 5 isoform b...
RPS6KB1               0.234   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
RPS6KB2               0.224   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
AKT1                  0.169   AKT1 kinase 
AKT1                  0.169   AKT1 kinase 
AKT1                  0.169   AKT1 kinase 
SGK2                  0.167   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.167   serum/glucocorticoid regulated kinase 2 isoform beta...
AKT3                  0.167   AKT3 kinase isoform 1 
AKT3                  0.167   AKT3 kinase isoform 2 
SGK1                  0.167   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.167   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.167   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.167   serum/glucocorticoid regulated kinase 1 isoform 2 [...
AKT2                  0.165   AKT2 kinase 
SGK3                  0.165   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.165   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PRKCA                 0.151   protein kinase C, alpha 
PRKCB                 0.150   protein kinase C, beta isoform 1 
PRKCH                 0.148   protein kinase C, eta 
PRKCB                 0.148   protein kinase C, beta isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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