Guide to the Human Genome
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Name: ZNF830 Sequence: fasta or formatted (372aa) NCBI GI: 145309298
Description:

coiled-coil domain containing 16

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         30           1
 C cysteine            0.8          3           1
 D aspartate           7.3         27           2
 E glutamate          13.2         49           9
 F phenylalanine       2.2          8           2
 G glycine             4.6         17           1
 H histidine           1.6          6           1
 I isoleucine          4.3         16           2
 K lysine              9.4         35           2
 L leucine             7.3         27           2
 M methionine          1.1          4           1
 N asparagine          3.0         11           1
 P proline             5.1         19           2
 Q glutamine           5.1         19           1
 R arginine            7.3         27           2
 S serine              8.9         33           3
 T threonine           3.8         14           2
 V valine              5.4         20           2
 W tryptophan          1.1          4           1
 Y tyrosine            0.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 16 
ERC1                  0.047   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.047   RAB6-interacting protein 2 isoform delta 
CHGA                  0.035   chromogranin A precursor 
TAOK2                 0.030   TAO kinase 2 isoform 1 
TAOK2                 0.030   TAO kinase 2 isoform 2 
TNNT2                 0.030   troponin T type 2, cardiac isoform 4 
CALD1                 0.030   caldesmon 1 isoform 1 
NUCB2                 0.028   nucleobindin 2 
MYO6                  0.027   myosin VI 
HTATSF1               0.027   HIV-1 Tat specific factor 1 
HTATSF1               0.027   HIV-1 Tat specific factor 1 
RTF1                  0.027   Paf1/RNA polymerase II complex component 
MYST4                 0.027   MYST histone acetyltransferase (monocytic leukemia)...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.025   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CSPP1                 0.025   centrosome spindle pole associated protein 1 isofor...
CSPP1                 0.025   centrosome spindle pole associated protein 1 isofor...
TNNT2                 0.024   troponin T type 2, cardiac isoform 2 
TNNT2                 0.024   troponin T type 2, cardiac isoform 1 
TNNT2                 0.024   troponin T type 2, cardiac isoform 3 
LOC283685             0.024   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC400352             0.024   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.024   PREDICTED: similar to Putative golgin subfamily A m...
CALD1                 0.024   caldesmon 1 isoform 4 
CALD1                 0.024   caldesmon 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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