Guide to the Human Genome
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Name: STAT2 Sequence: fasta or formatted (851aa) NCBI GI: 4885615
Description:

signal transducer and activator of transcription 2

Referenced in:

Interferon
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         27           2
 C cysteine            1.5         13           1
 D aspartate           5.2         44           3
 E glutamate           8.5         72           2
 F phenylalanine       3.8         32           2
 G glycine             4.7         40           2
 H histidine           2.1         18           1
 I isoleucine          4.2         36           2
 K lysine              5.5         47           2
 L leucine            15.5        132           3
 M methionine          1.8         15           2
 N asparagine          3.5         30           1
 P proline             6.8         58           2
 Q glutamine           7.9         67           3
 R arginine            5.2         44           2
 S serine              6.7         57           2
 T threonine           4.9         42           2
 V valine              5.2         44           2
 W tryptophan          1.8         15           1
 Y tyrosine            2.1         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal transducer and activator of transcription 2 [H... 
STAT1                 0.303   signal transducer and activator of transcription 1 is...
STAT1                 0.302   signal transducer and activator of transcription 1 i...
STAT4                 0.286   signal transducer and activator of transcription 4 [H...
STAT3                 0.276   signal transducer and activator of transcription 3 i...
STAT3                 0.276   signal transducer and activator of transcription 3 i...
STAT3                 0.276   signal transducer and activator of transcription 3 i...
STAT5B                0.115   signal transducer and activator of transcription 5B ...
STAT5A                0.112   signal transducer and activator of transcription 5A ...
STAT6                 0.089   signal transducer and activator of transcription 6 [...
DHX30                 0.008   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.008   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
SLC26A8               0.008   solute carrier family 26, member 8 isoform a 
SLC26A8               0.008   solute carrier family 26, member 8 isoform b 
SMAP1                 0.008   stromal membrane-associated GTPase-activating protei...
C14orf145             0.008   hypothetical protein LOC145508 
KDM5D                 0.008   jumonji, AT rich interactive domain 1D isoform 3 [H...
KDM5D                 0.008   jumonji, AT rich interactive domain 1D isoform 2 [Ho...
KDM5D                 0.008   jumonji, AT rich interactive domain 1D isoform 1 [H...
VSIG1                 0.007   V-set and immunoglobulin domain containing 1 
SLMAP                 0.007   sarcolemma associated protein 
MYO10                 0.007   myosin X 
FILIP1                0.007   filamin A interacting protein 1 
C6orf204              0.007   chromosome 6 open reading frame 204 isoform a [Homo...
PPP1R13L              0.006   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.006   protein phosphatase 1, regulatory subunit 13 like [H...
KIF16B                0.006   kinesin-like motor protein C20orf23 
SIKE                  0.006   suppressor of IKK epsilon isoform 1 
SIKE                  0.006   suppressor of IKK epsilon isoform 2 
KRT27                 0.006   keratin 27 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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