SMARCA1 12637

Name: SMARCA1	Sequence: fasta or formatted (1054aa)		NCBI GI: 21071044
Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [1042aa] SWI/SNF-related matrix-associated actin-dependent regulator of ch...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 71 5 C cysteine 1.1 12 2 D aspartate 5.4 57 2 E glutamate 10.5 111 3 F phenylalanine 4.4 46 2 G glycine 4.4 46 2 H histidine 1.6 17 1 I isoleucine 6.0 63 1 K lysine 9.1 96 3 L leucine 9.1 96 3 M methionine 3.1 33 2 N asparagine 4.0 42 2 P proline 4.6 48 2 Q glutamine 4.3 45 2 R arginine 7.3 77 2 S serine 5.1 54 2 T threonine 4.4 46 2 V valine 4.7 50 2 W tryptophan 1.3 14 1 Y tyrosine 2.8 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF-related matrix-associated actin-dependent re... SMARCA1 0.984 SWI/SNF-related matrix-associated actin-dependent r... SMARCA5 0.813 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.210 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.210 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.210 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.210 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.209 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.209 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.209 SWI/SNF-related matrix-associated actin-dependent re... CHD2 0.205 chromodomain helicase DNA binding protein 2 isoform... SMARCA2 0.199 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.199 SWI/SNF-related matrix-associated actin-dependent re... CHD1 0.198 chromodomain helicase DNA binding protein 1 CHD3 0.197 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.197 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.197 chromodomain helicase DNA binding protein 3 isoform... CHD1L 0.195 chromodomain helicase DNA binding protein 1-like [H... CHD5 0.192 chromodomain helicase DNA binding protein 5 CHD4 0.189 chromodomain helicase DNA binding protein 4 CHD6 0.179 chromodomain helicase DNA binding protein 6 CHD8 0.179 chromodomain helicase DNA binding protein 8 CHD7 0.177 chromodomain helicase DNA binding protein 7 CHD9 0.177 chromodomain helicase DNA binding protein 9 SMARCAD1 0.138 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.138 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.138 SWI/SNF-related, matrix-associated actin-dependent ... SRCAP 0.120 Snf2-related CBP activator protein ERCC6 0.119 excision repair cross-complementing rodent repair def... INO80 0.115 INO80 complex homolog 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.