SMARCA1 6704

Name: SMARCA1	Sequence: fasta or formatted (1042aa)		NCBI GI: 164419749
Description: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform b		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [1054aa] SWI/SNF-related matrix-associated actin-dependent regulator of ch...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 71 5 C cysteine 1.2 12 2 D aspartate 5.4 56 2 E glutamate 10.5 109 3 F phenylalanine 4.2 44 2 G glycine 4.3 45 2 H histidine 1.6 17 1 I isoleucine 6.0 63 1 K lysine 9.1 95 3 L leucine 9.0 94 3 M methionine 3.2 33 2 N asparagine 4.0 42 2 P proline 4.6 48 2 Q glutamine 4.2 44 2 R arginine 7.3 76 2 S serine 5.2 54 2 T threonine 4.4 46 2 V valine 4.7 49 2 W tryptophan 1.3 14 1 Y tyrosine 2.9 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.996 SWI/SNF-related matrix-associated actin-dependent re... SMARCA5 0.826 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.216 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.216 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.216 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.216 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.216 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.216 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.216 SWI/SNF-related matrix-associated actin-dependent re... CHD2 0.212 chromodomain helicase DNA binding protein 2 isoform... SMARCA2 0.206 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.206 SWI/SNF-related matrix-associated actin-dependent re... CHD1 0.204 chromodomain helicase DNA binding protein 1 CHD3 0.203 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.203 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.203 chromodomain helicase DNA binding protein 3 isoform... CHD1L 0.200 chromodomain helicase DNA binding protein 1-like [H... CHD5 0.199 chromodomain helicase DNA binding protein 5 CHD4 0.196 chromodomain helicase DNA binding protein 4 CHD6 0.185 chromodomain helicase DNA binding protein 6 CHD8 0.185 chromodomain helicase DNA binding protein 8 CHD7 0.184 chromodomain helicase DNA binding protein 7 CHD9 0.183 chromodomain helicase DNA binding protein 9 SMARCAD1 0.144 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.144 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.144 SWI/SNF-related, matrix-associated actin-dependent ... ERCC6 0.125 excision repair cross-complementing rodent repair def... SRCAP 0.122 Snf2-related CBP activator protein INO80 0.116 INO80 complex homolog 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.