Search of human proteins with 113425870

Search of human proteins with 113425870

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo
sapiens]
         (284 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo sapi...   601   e-172
gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo sapi...   601   e-172
gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo sap...   601   e-172
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              51   1e-06
gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isof...    46   3e-05
gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isofo...    46   3e-05
gi|22027541 programmed cell death 7 [Homo sapiens]                     45   6e-05
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap...    45   9e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       44   2e-04
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       44   2e-04
gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ...    44   2e-04
gi|50345997 E1A binding protein p300 [Homo sapiens]                    43   3e-04
gi|163965366 nascent polypeptide-associated complex alpha subuni...    43   4e-04
gi|42733592 hypothetical protein LOC399693 [Homo sapiens]              43   4e-04
gi|145309324 FH2 domain containing 1 [Homo sapiens]                    42   5e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]            42   6e-04
gi|224465238 hypothetical protein LOC283999 [Homo sapiens]             42   8e-04
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ...    42   8e-04
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ...    42   8e-04
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ...    42   8e-04
gi|50428940 mediator complex subunit 25 [Homo sapiens]                 42   8e-04
gi|148806908 fibronectin type III domain containing 1 [Homo sapi...    41   0.001
gi|13699803 WAS protein family, member 3 [Homo sapiens]                41   0.001
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             40   0.002
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       40   0.002
gi|41152235 ubiquitin specific protease 51 [Homo sapiens]              40   0.002
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    40   0.002
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    40   0.002
gi|189181724 proteoglycan 4 isoform D [Homo sapiens]                   40   0.002

>gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo
           sapiens]
          Length = 284

 Score =  601 bits (1549), Expect = e-172
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF 60
           MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF
Sbjct: 1   MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF 60

Query: 61  SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ 120
           SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ
Sbjct: 61  SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ 120

Query: 121 PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV 180
           PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV
Sbjct: 121 PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV 180

Query: 181 ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG 240
           ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG
Sbjct: 181 ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG 240

Query: 241 PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD 284
           PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD
Sbjct: 241 PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD 284


>gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo
           sapiens]
          Length = 284

 Score =  601 bits (1549), Expect = e-172
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF 60
           MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF
Sbjct: 1   MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF 60

Query: 61  SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ 120
           SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ
Sbjct: 61  SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ 120

Query: 121 PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV 180
           PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV
Sbjct: 121 PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV 180

Query: 181 ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG 240
           ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG
Sbjct: 181 ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG 240

Query: 241 PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD 284
           PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD
Sbjct: 241 PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD 284


>gi|113425870 PREDICTED: hypothetical protein LOC283876 [Homo
           sapiens]
          Length = 284

 Score =  601 bits (1549), Expect = e-172
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF 60
           MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF
Sbjct: 1   MSFIWKAVLRPSTPRPVLLSFPRLTLFCNFLFMSLEATKWWEIRDSNIWWPCDVSKLLDF 60

Query: 61  SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ 120
           SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ
Sbjct: 61  SQFPFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ 120

Query: 121 PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV 180
           PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV
Sbjct: 121 PSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAV 180

Query: 181 ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG 240
           ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG
Sbjct: 181 ENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRG 240

Query: 241 PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD 284
           PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD
Sbjct: 241 PHKARQTLQPDPDAPPSRMHMRGTLPETHLPERPGSTRANWRAD 284


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 55/199 (27%), Positives = 75/199 (37%), Gaps = 36/199 (18%)

Query: 75  RGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGP 134
           R   + G +G +    P   P P+ A   T R         P   +P PP P PP P   
Sbjct: 369 RPPEADGKKGNSPNSEP---PTPKTAWAETSR---------PPETEPGPPAPKPPLPPPH 416

Query: 135 HARAETGASPGS-PVR--QPLPGPAPQRE-AAWGRRR----------VERAAEDKEEVAV 180
              A     PG  P R   P   PAP+ E  AW +RR          VERA   +EE   
Sbjct: 417 RGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEER 476

Query: 181 ENKKELSAVCPDAGRR----WGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRL 236
             ++E  A C +  +R    +G     L A PA  PA       P    P   +  ++  
Sbjct: 477 RMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAPPAA------PSTPAPPPAVPKELPA 530

Query: 237 LPRGPHKARQTLQPDPDAP 255
            P  P  +  T + +P+ P
Sbjct: 531 PPAPPPASAPTPETEPEEP 549



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 114  GGPAPAQPSPPGPLPPTPHGPHARAETGA--SPGSPVRQPLPGPAPQREAAWGRRRVE-- 169
            G   PA P  P PL   P GP  +  + A   P +P  + LP PA    A+ GR  +   
Sbjct: 1994 GSLPPAPPPAPPPLSLLPVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPV 2053

Query: 170  --RAAEDKEEVAVENKKELSAVCPDAGRRWGQARPDLHAIPA 209
              +  +D ++++       S+  P  GR +      L A P+
Sbjct: 2054 ELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPS 2095



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 49/187 (26%), Positives = 71/187 (37%), Gaps = 27/187 (14%)

Query: 90  RPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVR 149
           RP TSP  +AA          K      P  P PP  L   P  P   A        P+ 
Sbjct: 804 RPLTSPLRQAADEDD------KGMRSETPPVPPPPPYLASYPGFPENGAPGPPISRFPLE 857

Query: 150 QPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRRWGQARPDLHAIPA 209
           +P P P P    +    +++     K+E   E   +L+   P+AGR+           PA
Sbjct: 858 EPGPRPLPWPPGSDEVAKIQ-TPPPKKEPPKEETAQLTG--PEAGRK-----------PA 903

Query: 210 GVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQP-DPDAPPSRM-HMRGTLPE 267
                  +G  P    P+     + R  PR P  +R+ + P +P APP R   ++   P 
Sbjct: 904 RGVGSGGQGPPP----PRRESRTETRWGPR-PGSSRRGIPPEEPGAPPRRAGPIKKPPPP 958

Query: 268 THLPERP 274
           T + E P
Sbjct: 959 TKVEELP 965



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 43/173 (24%), Positives = 56/173 (32%), Gaps = 19/173 (10%)

Query: 113 TGGPAPAQP----SPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRV 168
           T  P PA P    +PP P P +   P    E  A        P PG A       G    
Sbjct: 517 TPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGGST 576

Query: 169 ERAAEDKEEVAVENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLRE----GKDPGRL 224
              +            E S V P    + G   P+    P   P    E    G  P R 
Sbjct: 577 SSTS--------SGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQ 628

Query: 225 LPKVRL-LPKVR--LLPRGPHKARQTLQPDPDAPPSRMHMRGTLPETHLPERP 274
            P   L  PK +  L PR   + ++ L         + H +G+ P T +P  P
Sbjct: 629 PPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSP 681


>gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isoform 2
            [Homo sapiens]
          Length = 1562

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 19/183 (10%)

Query: 105  VRGASVKRTGGPAPAQPSPPGPLPPTPHGP-HARAETGASP---GSPVRQPLPGPAPQRE 160
            VR A+      P P  P PPGP  P   GP  +R E   S    G P  + LPG    ++
Sbjct: 1118 VRNATRHPGAAPMPVHPPPPGPREPAQQGPTPSRVELDDSDVFHGEPEPEELPGGTGSQQ 1177

Query: 161  AAWGRRRVERAAEDKEEVAVENKKELSAV-CP----DAGRRWGQARPDLHAIPAGVPACL 215
               G+ +V    ED E+     ++EL  + CP    D   R  + R  +H    G     
Sbjct: 1178 RVQGKHQV--LLEDPEQEGSAEEEELGVLPCPSTSLDGENRGIRTRNPIHLAFPG--PLF 1233

Query: 216  REGKDPGRL--LPKVRLLPKVRLLPRGPHKARQTLQPDPDAPPSRMHMRGTLPETHLPER 273
             EG     L  +  +R L    LLP    + +   +P+ D  P+       +  T  P  
Sbjct: 1234 MEGLADSALEDVENLRHLILWSLLPGHTMETQAAQEPEDDLTPT----PSVISVTSHPWD 1289

Query: 274  PGS 276
            PGS
Sbjct: 1290 PGS 1292


>gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isoform 1
            [Homo sapiens]
          Length = 1522

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 19/183 (10%)

Query: 105  VRGASVKRTGGPAPAQPSPPGPLPPTPHGP-HARAETGASP---GSPVRQPLPGPAPQRE 160
            VR A+      P P  P PPGP  P   GP  +R E   S    G P  + LPG    ++
Sbjct: 1078 VRNATRHPGAAPMPVHPPPPGPREPAQQGPTPSRVELDDSDVFHGEPEPEELPGGTGSQQ 1137

Query: 161  AAWGRRRVERAAEDKEEVAVENKKELSAV-CP----DAGRRWGQARPDLHAIPAGVPACL 215
               G+ +V    ED E+     ++EL  + CP    D   R  + R  +H    G     
Sbjct: 1138 RVQGKHQV--LLEDPEQEGSAEEEELGVLPCPSTSLDGENRGIRTRNPIHLAFPG--PLF 1193

Query: 216  REGKDPGRL--LPKVRLLPKVRLLPRGPHKARQTLQPDPDAPPSRMHMRGTLPETHLPER 273
             EG     L  +  +R L    LLP    + +   +P+ D  P+       +  T  P  
Sbjct: 1194 MEGLADSALEDVENLRHLILWSLLPGHTMETQAAQEPEDDLTPT----PSVISVTSHPWD 1249

Query: 274  PGS 276
            PGS
Sbjct: 1250 PGS 1252


>gi|22027541 programmed cell death 7 [Homo sapiens]
          Length = 485

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 30/76 (39%), Positives = 34/76 (44%), Gaps = 10/76 (13%)

Query: 89  LRPRTSPKPRAATGTTVRGASVKRTGGPAPA-QPSPPGPLPPTPHGPHARAETGASPGSP 147
           L+P  + +PRA+       A   R GG A A  P PP PLPP P  P  R   G   G  
Sbjct: 56  LQPPLALQPRAS-------AEASRGGGGAGAFYPVPPPPLPPPP--PQCRPFPGTDAGER 106

Query: 148 VRQPLPGPAPQREAAW 163
            R P PGP P     W
Sbjct: 107 PRPPPPGPGPPWSPRW 122



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 12/50 (24%)

Query: 115 GPAPAQPSPPGPL--PPTPHGPHARAETGASPGSPVRQP-LPGPAPQREA 161
           GP P QP PP P   PP P           SP  P   P  PGP P   A
Sbjct: 13  GPPPPQPPPPAPFGCPPPPL---------PSPAFPPPLPQRPGPFPGASA 53



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 13/47 (27%)

Query: 114 GGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQP-LPGPAPQR 159
           G P P  P PP   PP P G          P  P+  P  P P PQR
Sbjct: 10  GRPGPPPPQPP---PPAPFG---------CPPPPLPSPAFPPPLPQR 44


>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
           sapiens]
          Length = 735

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 56/202 (27%), Positives = 77/202 (38%), Gaps = 31/202 (15%)

Query: 108 ASVKRTGGPAPA-QPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRR 166
           +  K  G PA   +PSPP P P  P G  A AE  +SP +  R P  G   Q      RR
Sbjct: 24  SDAKERGHPAQRPEPSPPEPEPQAPEGSQAGAEGPSSPEAS-RSPARGAYLQSLEPSSRR 82

Query: 167 RVERAAEDKEEVAV--------ENKKEL---------------SAVCPDAGRRWGQARPD 203
            V   A+  E+ ++        E   E+                   P  G    +    
Sbjct: 83  WVLGGAKPAEDTSLGPGVPGTGEPAGEIWYNPIPEEDPRPPAPEPPGPQPGSAESEGLAP 142

Query: 204 LHAIPAGVPACLREGKDPG---RLLPKVRLLPKV--RLLPRGPHKARQTLQPDP-DAPPS 257
             A PA  P      K PG   RL  K++ LP++  RL  RGP   R+  +  P  +  S
Sbjct: 143 QGAAPASPPTKASRTKSPGPARRLSIKMKKLPELRRRLSLRGPRAGRERERAAPAGSVIS 202

Query: 258 RMHMRGTLPETHLPERPGSTRA 279
           R H+  ++        PG TR+
Sbjct: 203 RYHLDSSVGGPGPAAGPGGTRS 224



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 29/103 (28%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 104 TVRGASVKRTGGPAPA---QPSPP-GPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQR 159
           T  G  V  TG PA      P P   P PP P  P  +  +  S G   +   P   P +
Sbjct: 94  TSLGPGVPGTGEPAGEIWYNPIPEEDPRPPAPEPPGPQPGSAESEGLAPQGAAPASPPTK 153

Query: 160 EAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRRWGQARP 202
            +        R    K +   E ++ LS   P AGR   +A P
Sbjct: 154 ASRTKSPGPARRLSIKMKKLPELRRRLSLRGPRAGRERERAAP 196


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 43/159 (27%), Positives = 54/159 (33%), Gaps = 15/159 (9%)

Query: 115 GPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGP--APQREAAWGRRRVERAA 172
           GP P +  PP    P P G    +  G   GSP+ Q LP P  APQ+ A+      +   
Sbjct: 471 GPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQG 530

Query: 173 EDKEEVAVENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLP 232
                VA           P A R      P      AG P   R+    G   PK    P
Sbjct: 531 RQSRPVAG------GPGAPPAARPPASPSPQRQ---AGPPQATRQTSVSGPAPPKASGAP 581

Query: 233 KVRLLPRGPHKARQTLQPDPDAPPSRMHMRGTLPETHLP 271
                 +GP +      P P  P  +    G +P T  P
Sbjct: 582 PGGQQRQGPPQK----PPGPAGPTRQASQAGPVPRTGPP 616



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 20/96 (20%)

Query: 84  GRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLP---PTPH-------- 132
           G+ RQ  P+  P P   T    +   V RTG P   QP P GP P   P P         
Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQD 643

Query: 133 -GPHARAETGASPGSPVRQP--------LPGPAPQR 159
             P A A  G  P   + +         LP PAP R
Sbjct: 644 VPPPATAAAGGPPHPQLNKSQSLTNAFNLPEPAPPR 679


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 43/159 (27%), Positives = 54/159 (33%), Gaps = 15/159 (9%)

Query: 115 GPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGP--APQREAAWGRRRVERAA 172
           GP P +  PP    P P G    +  G   GSP+ Q LP P  APQ+ A+      +   
Sbjct: 471 GPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQG 530

Query: 173 EDKEEVAVENKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLP 232
                VA           P A R      P      AG P   R+    G   PK    P
Sbjct: 531 RQSRPVAG------GPGAPPAARPPASPSPQRQ---AGPPQATRQTSVSGPAPPKASGAP 581

Query: 233 KVRLLPRGPHKARQTLQPDPDAPPSRMHMRGTLPETHLP 271
                 +GP +      P P  P  +    G +P T  P
Sbjct: 582 PGGQQRQGPPQK----PPGPAGPTRQASQAGPVPRTGPP 616



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 1/80 (1%)

Query: 84  GRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGAS 143
           G+ RQ  P+  P P   T    +   V RTG P   QP P GP P     P    +    
Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQD 643

Query: 144 PGSPVRQPLPGPA-PQREAA 162
              P      GP  PQ +A+
Sbjct: 644 VPPPATAAAGGPPHPQLKAS 663


>gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo
            sapiens]
          Length = 1386

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 47/159 (29%), Positives = 62/159 (38%), Gaps = 12/159 (7%)

Query: 64   PFPIKWVVLGIRGSNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSP 123
            P  +   +LGIR +  AG  G      P  SP P  +T ++  G + +  G   P    P
Sbjct: 1187 PLSVSQPMLGIREARPAG-LGAGPAASPHLSPSPAPSTASSAPGRTWQGNGEMTPPLQGP 1245

Query: 124  PGPLPPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENK 183
                   P     R E   SPG     P P P P+ EA+W      RAA     +  E  
Sbjct: 1246 RARFRKKPKALPYRREN--SPGD--LPPPPLPPPEEEASWALEL--RAAGSMSSLERERS 1299

Query: 184  KELSAV--CPDAGRRWGQARPDLHA-IPAGVPACLREGK 219
             E  AV   P A +R     PD  A +P   P+ L  G+
Sbjct: 1300 GERKAVQAVPLAAQR--VLHPDEEAWLPYSRPSFLSRGQ 1336



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 40/170 (23%), Positives = 50/170 (29%), Gaps = 38/170 (22%)

Query: 92   RTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSP--VR 149
            R +P P  + G        + T    P+ P PP P    PH           P SP  V 
Sbjct: 1139 RETPSPTPSYGQ-------QSTATLTPSPPDPPQPPTDMPHLHQMPRRVPLGPSSPLSVS 1191

Query: 150  QPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRRW---GQARPDLHA 206
            QP+ G    R A  G       A       +      S      GR W   G+  P L  
Sbjct: 1192 QPMLGIREARPAGLG-------AGPAASPHLSPSPAPSTASSAPGRTWQGNGEMTPPLQG 1244

Query: 207  IPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQPDPDAPP 256
                               P+ R   K + LP     +   L P P  PP
Sbjct: 1245 -------------------PRARFRKKPKALPYRRENSPGDLPPPPLPPP 1275


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 15/98 (15%)

Query: 95   PKPRAATGTTVRGASVKRTGGPAPA---QPSPPGPLPP----------TPHGPHARAETG 141
            P P  AT TT  G        P P    QP+PP  +PP             G  A   T 
Sbjct: 1848 PSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQVTP 1907

Query: 142  ASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVA 179
             +P    + PLPGP P   A     +++RAAE + ++A
Sbjct: 1908 PTPPQTAQPPLPGPPPA--AVEMAMQIQRAAETQRQMA 1943



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 106  RGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGP 155
            R AS++RTG     Q   P P P TP  P  +  T      P  QP P P
Sbjct: 1831 RMASMQRTG-VVGQQQGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTP 1879


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 47/171 (27%), Positives = 64/171 (37%), Gaps = 10/171 (5%)

Query: 94   SPKPRAATGTTVRGASVKRTGGPAPAQPSPPG-PLPPTPHGPHARAETGASPGSPVRQPL 152
            SPK   AT  T  GA+    G   P   +P      P    P     T +S G P    +
Sbjct: 1411 SPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAV 1470

Query: 153  PGPAPQREAAWGRRRVERAAEDKEEVAVE---NKKELSAVCPDAGRRWGQARPDLHAIPA 209
              P+P+   A   ++V  ++  K+  A         L AV P + +    A P     P 
Sbjct: 1471 TPPSPKEPPA--PKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEV-PATPSSRRDPI 1527

Query: 210  GVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHK--ARQTLQPDPDAPPSR 258
               A L   K P  L PK  L+P    +P  P K  A  T +  P  P S+
Sbjct: 1528 APTATLLSKKTPATLAPKEALIPPAMTVP-SPKKTPAIPTPKEAPATPSSK 1577



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 91   PRTSPKPRAATGTTVRG--ASVKRTGGPAP---AQPSPPGPLPPTPHGPHARAETGASP- 144
            P+ +P P AAT  + +G  A+    G P P     PSP G    TP    A     A+P 
Sbjct: 982  PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041

Query: 145  ---GSPVRQPLPGPAPQREAA 162
               GSP   PLP  AP   AA
Sbjct: 1042 SPKGSPAATPLPKGAPTTPAA 1062



 Score = 38.1 bits (87), Expect = 0.009
 Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 7/70 (10%)

Query: 91   PRTSPKPRAATGTTVRGASVKRTGGPAP-AQPSPPGPLPPTPHG-PHARAETGASPGSPV 148
            P+ +P P AAT  + +G+     G P P   P+PP   PP+P G P   A T +S G P 
Sbjct: 1306 PKGAPTPPAATPPSPKGSP----GTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPT 1361

Query: 149  R-QPLPGPAP 157
                  GP P
Sbjct: 1362 TPSSKEGPTP 1371



 Score = 37.4 bits (85), Expect = 0.015
 Identities = 43/194 (22%), Positives = 59/194 (30%), Gaps = 18/194 (9%)

Query: 94   SPKPRAATGTTVRGASVKRT-GGPAP----------AQPSPPGPLPPTPHGPHARAETGA 142
            +P P+ A   ++  +S K+    PAP            P+PP   PP+P G  A      
Sbjct: 902  TPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKW 961

Query: 143  SPGSP-VRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRRWGQAR 201
            +P  P    P P   P   +  G      A     +          A  P A        
Sbjct: 962  APTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPA-----VTP 1016

Query: 202  PDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQPDPDAPPSRMHM 261
            P     PA  P        P    P  +  P    LP+G         P P   P+   +
Sbjct: 1017 PSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSL 1076

Query: 262  RGT-LPETHLPERP 274
            +G   P    P  P
Sbjct: 1077 KGAPTPPAATPPSP 1090



 Score = 36.2 bits (82), Expect = 0.034
 Identities = 54/202 (26%), Positives = 72/202 (35%), Gaps = 41/202 (20%)

Query: 91   PRTSPK-------PRAATGTTVRGASVKRTGGPAPAQPSPP-GPLPPTPHGPHARAETGA 142
            P T+P        P +  G T   A+    GGPA   PSP  GP  P+P G         
Sbjct: 1350 PATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKG--------- 1400

Query: 143  SPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVA------VENKKELSAVCPDAGRR 196
             P SP   PL   +P++  A    R   A   K ++       V  KK  +   P  G  
Sbjct: 1401 DPTSPAVIPL---SPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPA 1457

Query: 197  WGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQPDPDAPP 256
               ++ D   +PA  P             PK    PK       P KA  T  P P   P
Sbjct: 1458 TPSSKGD-PTLPAVTPPS-----------PKEPPAPKQVATSSSPKKAPAT--PAPMGAP 1503

Query: 257  SRMHMRGTLPETHLPERPGSTR 278
            +   +  + P+  +P  P S R
Sbjct: 1504 TLPAVIPSSPK-EVPATPSSRR 1524



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 48/191 (25%), Positives = 62/191 (32%), Gaps = 20/191 (10%)

Query: 91   PRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPP-GPLPP--TPHGPHARAETGASPGSP 147
            P+ +P P AAT  + +G          PA PSP   P PP  TP  P     T +  G+P
Sbjct: 936  PKGAPTPPAATPPSPKGG---------PATPSPKWAPTPPAATPPSPKGGPATPSPKGAP 986

Query: 148  VRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCP---DAGRRWGQARPDL 204
                   P+P+   A       + A     V   + K   A  P    A        P  
Sbjct: 987  TPPAATPPSPKGGPA---TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP 1043

Query: 205  HAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQPDPDAPPSRMHMRGT 264
               PA  P        P   LP  +  P    L   P     T  P P   P+    +G 
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAAT-PPSPKGGPATPSPKGA 1102

Query: 265  -LPETHLPERP 274
             +P    P  P
Sbjct: 1103 PMPPAATPPSP 1113



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 15/80 (18%)

Query: 94   SPKPRAATGTTVRGASVKRTGGPAP-AQPSPPGPLPPTPHG-----PHARAET--GASPG 145
            +P P AAT  + +G        P+P   P PP   PP+P G     PH  A T   A+P 
Sbjct: 1079 APTPPAATPPSPKGGPAT----PSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPP 1134

Query: 146  SP---VRQPLPGPAPQREAA 162
            SP   +  P P  AP   AA
Sbjct: 1135 SPKGGLATPPPKGAPTTPAA 1154



 Score = 35.0 bits (79), Expect = 0.075
 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 17/85 (20%)

Query: 91   PRTSPKPRAATGTTVRG--ASVKRTGGPAPAQPSPPGP-------------LPP--TPHG 133
            P+ +P P AAT  +++G  A+    G P PA  +PP P              PP  TP  
Sbjct: 1260 PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPS 1319

Query: 134  PHARAETGASPGSPVRQPLPGPAPQ 158
            P     T    G+P    +  P+P+
Sbjct: 1320 PKGSPGTPPPKGAPTPPAVTPPSPK 1344



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 9/75 (12%)

Query: 93   TSPKPRAATGT-TVRGASVKRTGGP-----APAQPSPPG-PLPP--TPHGPHARAETGAS 143
            T P P+    T +++GA       P      PA PSP G P+PP  TP  P     T   
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPH 1122

Query: 144  PGSPVRQPLPGPAPQ 158
             G+P       P+P+
Sbjct: 1123 KGAPTTPAATPPSPK 1137



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 91  PRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPP----GPLPPTPHGPHARAETGASPGS 146
           P+ +P P A T  + +G ++     P P+  + P    GP  P P    A + T +SP  
Sbjct: 861 PKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKK 920

Query: 147 PVRQPLPGPAP 157
               P P   P
Sbjct: 921 ARATPAPKGIP 931



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 53/207 (25%), Positives = 66/207 (31%), Gaps = 32/207 (15%)

Query: 91   PRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHG----------PHARAET 140
            P+ +P   AAT  + +G        P    P+ P   PP+P G          P   A T
Sbjct: 1145 PKGAPTTPAATPPSPKGGLATP---PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1201

Query: 141  GASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKK--ELSAVCPDAGRRWG 198
              SP   +  P P  AP   AA            K  +A  + K    +        + G
Sbjct: 1202 PPSPKGGLATPSPKGAPTTPAA-------TPPSPKGGLATPSPKGAPTTPAATPPSPKGG 1254

Query: 199  QARPDLHAI---PAGVPACLREG----KDPGRLLPKVRLLPKVRLLP-RGPHKARQTLQP 250
             A P        PA  P  L+ G       G   P V   P  +  P   P K   T  P
Sbjct: 1255 PATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPT--P 1312

Query: 251  DPDAPPSRMHMRGTLPETHLPERPGST 277
                PPS     GT P    P  P  T
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVT 1339



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 28/102 (27%), Positives = 36/102 (35%), Gaps = 30/102 (29%)

Query: 91   PRTSPKPRAATGTTVRG--ASVKRTGGPAPAQPSPPGP------------------LPPT 130
            P+ +P P AAT  + +G  A+    G P     +PP P                   PP+
Sbjct: 1099 PKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPS 1158

Query: 131  PHG----------PHARAETGASPGSPVRQPLPGPAPQREAA 162
            P G          P   A T  SP   +  P P  AP   AA
Sbjct: 1159 PKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1200



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 9/66 (13%)

Query: 92   RTSPKPRAATGTTVRGASVKR-------TGGPAPAQ-PSPPGPLPPTPH-GPHARAETGA 142
            + +  P A T +T +GA   +          P+P + P+PP   PP+P  GP   A  G 
Sbjct: 1577 KEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGT 1636

Query: 143  SPGSPV 148
                PV
Sbjct: 1637 PTSPPV 1642



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 58/223 (26%), Positives = 80/223 (35%), Gaps = 46/223 (20%)

Query: 93   TSPKPRAA-TGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASP------- 144
            TSP P+ A T   V   S ++     PA P+P G     P  P +  ++  SP       
Sbjct: 1606 TSPSPKEAPTPPAVTPPSPEK----GPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKM 1661

Query: 145  GSPVRQPLPG-PAPQREAAWGRRRVERAAEDKEEVAVENK-----KELSA----VCPDAG 194
            G+ V Q   G PA +   A     V  A E    +    +     K+ SA    +CPD  
Sbjct: 1662 GATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPS 1721

Query: 195  RRWGQARPDLHAIPAGVPACLRE------GKDPGRLLPKVRLLPK-------------VR 235
             + G   P     PA +    ++      GKD     PK  L P               +
Sbjct: 1722 AKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASH-SPKGPLAPPESKASTPLTAAAFEK 1780

Query: 236  LLPRGPHKARQTLQPDPDAP-PSRMHMRGTLP--ETHLPERPG 275
            +LP+ P  A  +  P P    P       TLP  +  LP  PG
Sbjct: 1781 VLPK-PESASVSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPG 1822


>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
          Length = 953

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 97  PRAATGTTVRGASVKRTGGPA------PAQPSPPGPLPPTPHGPHARAETGASPGSPVRQ 150
           P+ A G   +G S +R G P       P QP       P P       ET   PG  +R 
Sbjct: 501 PQRAWGAQRQGPSSQRPGSPPEKRSPFPQQPWSAVATQPCPRRAWTACETWEDPGPRLRN 560

Query: 151 PLPGPAPQREAAWGRRRVERA 171
           PL  P+P  +  W    V+RA
Sbjct: 561 PLERPSPPAQRPWSSSGVQRA 581


>gi|145309324 FH2 domain containing 1 [Homo sapiens]
          Length = 1143

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 20/42 (47%), Positives = 23/42 (54%)

Query: 116 PAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPLPGPAP 157
           P PA P PP P PP+P    +R E  +SP  P   PLPG  P
Sbjct: 30  PPPAPPPPPPPPPPSPPCSCSREECPSSPPPPPPPPLPGEPP 71


>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 94  SPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARA---ETGASPGSPVRQ 150
           SP P A             + GP PA+PS P P P  P GPH         A+P  P+ +
Sbjct: 94  SPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLAR 153

Query: 151 PLP-GPAPQREAAWGRRRVERA 171
           PLP G    RE     R   RA
Sbjct: 154 PLPQGSVTAREQEQRPRSRRRA 175



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 28/100 (28%), Positives = 33/100 (33%), Gaps = 32/100 (32%)

Query: 91  PRTSPKPRAATGTTVRGASVKRT-------GGPAPAQPSP----------------PGPL 127
           P    +P AA  + +  A  +R        GG   A P P                PGPL
Sbjct: 58  PAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPL 117

Query: 128 PPTPHGPHARAETGASPGSPV---------RQPLPGPAPQ 158
           P  P  P  R    + P  PV         R PL  P PQ
Sbjct: 118 PARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQ 157


>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 285

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 4/82 (4%)

Query: 94  SPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARA---ETGASPGSPVRQ 150
           SP P A             + GP PA+PS P P P  P GPH         A+P  P+ +
Sbjct: 94  SPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLAR 153

Query: 151 PLP-GPAPQREAAWGRRRVERA 171
           PLP G    RE     R   RA
Sbjct: 154 PLPQGSVTAREQEQRPRSRRRA 175



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 28/100 (28%), Positives = 33/100 (33%), Gaps = 32/100 (32%)

Query: 91  PRTSPKPRAATGTTVRGASVKRT-------GGPAPAQPSP----------------PGPL 127
           P    +P AA  + +  A  +R        GG   A P P                PGPL
Sbjct: 58  PAPRERPAAARLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSPGPL 117

Query: 128 PPTPHGPHARAETGASPGSPV---------RQPLPGPAPQ 158
           P  P  P  R    + P  PV         R PL  P PQ
Sbjct: 118 PARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLPQ 157


>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
          Length = 394

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 43/136 (31%), Positives = 52/136 (38%), Gaps = 27/136 (19%)

Query: 73  GIRGSNSAGNRG----RNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLP 128
           G RG   AG  G    R  + R R  P PR       R     R  GPA   PSPP    
Sbjct: 130 GPRGQ-CAGRSGDVLRRAGRRRARPPPVPRLPAPRAPR-----RPRGPATPDPSPPAG-- 181

Query: 129 PTPHGPHARAETGASPGSPVRQPLPGPAPQRE-----AAWGRRRVERAAEDKEEVAVENK 183
             PHGP  RA  G  PG   +   PG   ++         GRR+ +R A  +    +   
Sbjct: 182 -RPHGPAGRAAPGRRPGCTAQLRAPGRRGRQRLLVHPGGGGRRQWQRLARARRAALL--- 237

Query: 184 KELSAV-----CPDAG 194
             L A+     CPD G
Sbjct: 238 -ALGALAHLRRCPDTG 252



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 38/144 (26%), Positives = 46/144 (31%), Gaps = 31/144 (21%)

Query: 134 PHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDA 193
           P  R +   SP    R     P PQ  A    +R +R   D        + + +    D 
Sbjct: 87  PWGRWDWSPSPRFAARLSTSSPFPQGRA----QRPQRGGVDLPATPGGPRGQCAGRSGDV 142

Query: 194 GRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQPDPD 253
            RR G+ R    A P  VP                  LP     PR P + R    PDP 
Sbjct: 143 LRRAGRRR----ARPPPVPR-----------------LPA----PRAPRRPRGPATPDPS 177

Query: 254 APPSRMHMRGTLPETHLPERPGST 277
            P  R H  G         RPG T
Sbjct: 178 PPAGRPH--GPAGRAAPGRRPGCT 199


>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein
           [Homo sapiens]
          Length = 1650

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 34/90 (37%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 73  GIRG-SNSAGNRGRNRQLRPRTSPKPRAATGTT-VRGASVKRTGGPAPAQPSPPGPLP-P 129
           G RG S  +G RG      PR    PR ATG +  +G S    GG  P    PPG    P
Sbjct: 740 GARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTS----GGDGPH--GPPGERGLP 793

Query: 130 TPHGPHARAETGASPGSPVRQPLPGPAPQR 159
            P GP+        PG P +  LPG   QR
Sbjct: 794 GPQGPNGFPGPKGPPGPPGKDGLPGHPGQR 823



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 19/86 (22%)

Query: 81  GNRGRNRQLRPRTSPK---PRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPT-PHGPHA 136
           G RG + ++ PR  P    PR   G            GP P  P PPG      P GP  
Sbjct: 503 GERGDDGEIGPRGLPGESGPRGLLGPK----------GP-PGIPGPPGVRGMDGPQGPKG 551

Query: 137 RAETGASPGSPVRQPLPG----PAPQ 158
                  PG P +Q  PG    P PQ
Sbjct: 552 SLGPQGEPGPPGQQGTPGTQGLPGPQ 577



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 106  RGASVKRTGGPAPAQPSPPGPLPPT-PHGPHARAETGASPGSPVRQPLPGPAPQREAAWG 164
            RG   ++     P +P PPGP  PT   GP         PG P      GP  Q  A   
Sbjct: 1147 RGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGD 1206

Query: 165  R 165
            R
Sbjct: 1207 R 1207



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 107  GASVKRTGGPAPAQPSPPGPLPPT-PHGPHARAETGASPGSPVRQ 150
            GA   R     P QP  PGP     P GP  +     SPGS  RQ
Sbjct: 1202 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQ 1246


>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein
           [Homo sapiens]
          Length = 1629

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 34/90 (37%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 73  GIRG-SNSAGNRGRNRQLRPRTSPKPRAATGTT-VRGASVKRTGGPAPAQPSPPGPLP-P 129
           G RG S  +G RG      PR    PR ATG +  +G S    GG  P    PPG    P
Sbjct: 719 GARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTS----GGDGPH--GPPGERGLP 772

Query: 130 TPHGPHARAETGASPGSPVRQPLPGPAPQR 159
            P GP+        PG P +  LPG   QR
Sbjct: 773 GPQGPNGFPGPKGPPGPPGKDGLPGHPGQR 802



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 19/86 (22%)

Query: 81  GNRGRNRQLRPRTSPK---PRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPT-PHGPHA 136
           G RG + ++ PR  P    PR   G            GP P  P PPG      P GP  
Sbjct: 482 GERGDDGEIGPRGLPGESGPRGLLGPK----------GP-PGIPGPPGVRGMDGPQGPKG 530

Query: 137 RAETGASPGSPVRQPLPG----PAPQ 158
                  PG P +Q  PG    P PQ
Sbjct: 531 SLGPQGEPGPPGQQGTPGTQGLPGPQ 556



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 106  RGASVKRTGGPAPAQPSPPGPLPPT-PHGPHARAETGASPGSPVRQPLPGPAPQREAAWG 164
            RG   ++     P +P PPGP  PT   GP         PG P      GP  Q  A   
Sbjct: 1126 RGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGD 1185

Query: 165  R 165
            R
Sbjct: 1186 R 1186



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 107  GASVKRTGGPAPAQPSPPGPLPPT-PHGPHARAETGASPGSPVRQ 150
            GA   R     P QP  PGP     P GP  +     SPGS  RQ
Sbjct: 1181 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQ 1225


>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein
           [Homo sapiens]
          Length = 1736

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 34/90 (37%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 73  GIRG-SNSAGNRGRNRQLRPRTSPKPRAATGTT-VRGASVKRTGGPAPAQPSPPGPLP-P 129
           G RG S  +G RG      PR    PR ATG +  +G S    GG  P    PPG    P
Sbjct: 826 GARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTS----GGDGPH--GPPGERGLP 879

Query: 130 TPHGPHARAETGASPGSPVRQPLPGPAPQR 159
            P GP+        PG P +  LPG   QR
Sbjct: 880 GPQGPNGFPGPKGPPGPPGKDGLPGHPGQR 909



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 19/86 (22%)

Query: 81  GNRGRNRQLRPRTSPK---PRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPT-PHGPHA 136
           G RG + ++ PR  P    PR   G            GP P  P PPG      P GP  
Sbjct: 589 GERGDDGEIGPRGLPGESGPRGLLGPK----------GP-PGIPGPPGVRGMDGPQGPKG 637

Query: 137 RAETGASPGSPVRQPLPG----PAPQ 158
                  PG P +Q  PG    P PQ
Sbjct: 638 SLGPQGEPGPPGQQGTPGTQGLPGPQ 663



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 106  RGASVKRTGGPAPAQPSPPGPLPPT-PHGPHARAETGASPGSPVRQPLPGPAPQREAAWG 164
            RG   ++     P +P PPGP  PT   GP         PG P      GP  Q  A   
Sbjct: 1233 RGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGD 1292

Query: 165  R 165
            R
Sbjct: 1293 R 1293



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 107  GASVKRTGGPAPAQPSPPGPLPPT-PHGPHARAETGASPGSPVRQ 150
            GA   R     P QP  PGP     P GP  +     SPGS  RQ
Sbjct: 1288 GAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGRQ 1332


>gi|50428940 mediator complex subunit 25 [Homo sapiens]
          Length = 747

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 40/137 (29%), Positives = 51/137 (37%), Gaps = 20/137 (14%)

Query: 89  LRPRTSPKPRAATGTTVRGASVKRTGG--PAPAQPSPPGPLPPTPHGPHARAETGASPGS 146
           L+P T           VRG  +   GG  P P Q   P PLPP        A +GA+  +
Sbjct: 207 LQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPA-------APSGATLSA 259

Query: 147 PVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENK----------KELSAVCPDAGRR 196
             +QPLP   PQ +        + AA++  E A   K            L    P  G  
Sbjct: 260 APQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPP 319

Query: 197 WGQA-RPDLHAIPAGVP 212
           + QA  P L   P G P
Sbjct: 320 FSQAPAPQLPPGPPGAP 336



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 30/74 (40%), Positives = 34/74 (45%), Gaps = 15/74 (20%)

Query: 88  QLRPRTSPKPRAATGTTVRGASVKRTGGPAP---AQPSPPGPLPPTPHGPHARAETGASP 144
           QLRP   P+P+   G +  GA    TG P P   AQP PPG     P GP   A     P
Sbjct: 584 QLRP-PQPQPQGTVGAS--GA----TGQPQPQGTAQP-PPG----APQGPPGAASGPPPP 631

Query: 145 GSPVRQPLPGPAPQ 158
           G  +R   PG  PQ
Sbjct: 632 GPILRPQNPGANPQ 645


>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
          Length = 1894

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 50/183 (27%), Positives = 73/183 (39%), Gaps = 39/183 (21%)

Query: 95   PKPRAATGTTVRGAS----VKRTGGPAPAQPSPPGPLPPTPHGPHARAE--TGASPGS-- 146
            PK +     T  GA      +R    +PA+PS PG       GP +RA   + A+PG   
Sbjct: 1108 PKHQQVESPTGAGAGGDHRSQRGHAASPARPSRPG-------GPQSRARVPSRAAPGKSE 1160

Query: 147  -PVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRRWGQARPDLH 205
             P ++PL   + Q  +A          +D+EE A   K     +   +  +W  +     
Sbjct: 1161 PPSKRPLSSKSQQSVSA---------EDDEEEDAGFFKGGKEDLLSSSVPKWPSS----- 1206

Query: 206  AIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKA--RQTLQPDPDAPPSRMHMRG 263
            + P G       GKD    L K    P + L PRG   A  ++ L P P + P   H+  
Sbjct: 1207 STPRG-------GKDADGSLAKEEREPAIALAPRGGSLAPVKRPLPPPPGSSPRASHVPS 1259

Query: 264  TLP 266
             LP
Sbjct: 1260 RLP 1262



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 20/166 (12%)

Query: 74   IRGSNSAGNRGRNRQLRP-----RTSP-KPRAATGTTVRGASVKRTGGPAPAQPSPPGPL 127
            ++ S  A   G + + +P       SP +P AA          + T G AP Q  PP P+
Sbjct: 952  VQQSTDADTEGHSPKAQPGSTDRHASPARPPAARSQQHPSVPRRMTPGRAPQQ-QPPPPV 1010

Query: 128  PPTPH--GPHARAETGASPGSP----VRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVE 181
              + H  GP +R + G SP  P     +   P P  Q  +         ++      A++
Sbjct: 1011 ATSQHHPGPQSR-DAGRSPSQPRLSLTQAGRPRPTSQGRSHSSSDPYTASSRGMLPTALQ 1069

Query: 182  NKKELSAVCPDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPK 227
            N+ E      DA   +     ++ A     PA     K+    LPK
Sbjct: 1070 NQDE------DAQGSYDDDSTEVEAQDVRAPAHAARAKEAAASLPK 1109



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 48/183 (26%), Positives = 64/183 (34%), Gaps = 33/183 (18%)

Query: 116 PAPAQPSPPGPL----PPTPHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERA 171
           P P+ PSP  P     P  P  P  R           +    G AP++     ++  E  
Sbjct: 475 PEPSSPSPRAPASSQHPSVPASPQGRNAKDLLLDLKNKILANGGAPRKPQLRAKKAEELD 534

Query: 172 AEDKEEVAVEN--KKELSAVCP-DAGRRWGQARPDL---HAIPAGVPACLREGKDPGRLL 225
            +  E    E    +E S + P D   +    RP     H++ A           PGR  
Sbjct: 535 LQSTEITGEEELGSREDSPMSPSDTQDQKRTLRPPSRHGHSVVA-----------PGRTA 583

Query: 226 PKVRLLPKVRLLPR--GPHKARQTL--QPDPDAPPSRM----HMRGTLPETHLPERPGST 277
            + R+      LPR  G  K   +L  QP P APPS      H   T   +H P  P S 
Sbjct: 584 VRARM----PALPRREGVDKPGFSLATQPRPGAPPSASASPAHHASTQGTSHRPSLPASL 639

Query: 278 RAN 280
             N
Sbjct: 640 NDN 642


>gi|13699803 WAS protein family, member 3 [Homo sapiens]
          Length = 502

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 77  SNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQ------PSPPGPLPPT 130
           S SA +   NR  +P   P P+A  G+           G  PAQ      PS P P PP 
Sbjct: 290 SASARHMALNRPQQPPPPPPPQAPEGSQASAPMAPADYGMLPAQIIEYYNPSGPPPPPPP 349

Query: 131 PHGPHARAETGASPGSPVRQPLPGPAPQREAA 162
           P  P A+    +    P++ P P  A    AA
Sbjct: 350 PVIPSAQTAFVSPLQMPMQPPFPASASSTHAA 381



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 91  PRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASP--GSPV 148
           P   P P +A+ T         TG    A P PPGP PP P  P   +   +SP  G PV
Sbjct: 366 PMQPPFPASASSTHAAPPHPPSTGLLVTAPP-PPGPPPPPPGPPGPGSSLSSSPMHGPPV 424

Query: 149 RQ 150
            +
Sbjct: 425 AE 426


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 54/180 (30%), Positives = 65/180 (36%), Gaps = 57/180 (31%)

Query: 81  GNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPP-----GPLPPTPHGPH 135
           GN+GR+  L P   P   A    T RG      GGP P  P PP     GPLPP P G  
Sbjct: 334 GNKGRSGPLPP--VPLGIAPPPPTPRGPPPPGRGGPPP--PPPPATGRSGPLPPPPPG-- 387

Query: 136 ARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGR 195
                  + G P+  P P P P                                 P +G 
Sbjct: 388 -------AGGPPMPPPPPPPPPP--------------------------------PSSGN 408

Query: 196 RWGQARPDLHAIPAGVPA-CLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQPDPDA 254
             G A P L   PA VPA  L  G   G LL ++R   ++   P  P  +   LQP P +
Sbjct: 409 --GPAPPPLP--PALVPAGGLAPGGGRGALLDQIRQGIQLNKTPGAPESS--ALQPPPQS 462



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 22/76 (28%)

Query: 116 PAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQ--------------------PLPGP 155
           P PA     G LPP P   H   + G  P  P+                      P PGP
Sbjct: 163 PTPANEERRGGLPPLPL--HPGGDQGGPPVGPLSLGLATVDIQNPDITSSRYRGLPAPGP 220

Query: 156 APQREAAWGRRRVERA 171
           +P  +   G++++ +A
Sbjct: 221 SPADKKRSGKKKISKA 236


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 18/179 (10%)

Query: 91  PRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPP----GPLPPTPHGPHARAETGASPGS 146
           P  SP P+  +      +  +R    +P+ PSP      P+PP+   P  +  +   P  
Sbjct: 362 PCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRRSPVPPSCQSPSPQRRSPVPPSC 421

Query: 147 PVRQPL-PGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRRWGQARPDLH 205
           P  QP  P P P  E     R   +      +   + ++  S +   A    G + P L 
Sbjct: 422 PAPQPRPPPPPPPGERTLAERAYAKPPSHHVKAGFQGRRSYSELAEGAAYA-GASPPWLQ 480

Query: 206 AIPAGVPACLREGKD---PGRLLPKVRLLPKVRLLPRGPHKARQTLQPD----PDAPPS 257
           A  A +P     G +   PGR L   R    +RL        +Q  + D    P +PPS
Sbjct: 481 AEAATLPKPRAYGSELYGPGRPLSPRRAFEGIRL-----RFEKQPSEEDEWAVPTSPPS 534



 Score = 28.1 bits (61), Expect = 9.1
 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 13/82 (15%)

Query: 92  RTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGP---LPPTP----HGPHARAETGASP 144
           RT  + +A +G   R + + +   PAP  PSP  P    PP P      P  R+     P
Sbjct: 320 RTLLQEQARSGGQ-RHSPLSQRHSPAPQCPSPSPPARAAPPCPPCQSPVPQRRSPVPPCP 378

Query: 145 G-----SPVRQPLPGPAPQREA 161
                 SP     P P PQR +
Sbjct: 379 SPQQRRSPASPSCPSPVPQRRS 400


>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
          Length = 711

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 91  PRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQ 150
           PR  P+PR       R         P PA+P PP P PP P  P  RA  G+      R+
Sbjct: 100 PRRKPRPRPQPRARSRSQPGLSAPPPPPARPPPPPP-PPPPPAPRPRAWRGSR-----RR 153

Query: 151 PLPGPAPQ 158
             PG  PQ
Sbjct: 154 SRPGSRPQ 161



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 131 PHGPHARAETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVC 190
           P G   R  +G   G+   + +       EAA G  +     E  EE+ +E  +E     
Sbjct: 10  PSGSGVRWISGGGGGASPEEAVEKAGKMEEAAAGATKASSRRE-AEEMKLEPLQEREPA- 67

Query: 191 PDAGRRWGQARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQP 250
           P+    W  +  D   +P+ +P        P        + P+ +  PR   +AR   QP
Sbjct: 68  PEENLTWSSSGGDEKVLPS-IPLRCHSSSSP--------VCPRRKPRPRPQPRARSRSQP 118

Query: 251 DPDAPP 256
              APP
Sbjct: 119 GLSAPP 124


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 19/101 (18%)

Query: 73  GIRG-SNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPT- 130
           G++G S S G  G    + PR  P  R  TG      +    G P PA   PPGP+ P  
Sbjct: 306 GVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPA--GPPGPVGPAG 363

Query: 131 ----PHGPHARAETGAS-----------PGSPVRQPLPGPA 156
               P  P A+ E G +            G P     PGPA
Sbjct: 364 GPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPA 404



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 15/119 (12%)

Query: 80   AGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPA--PAQPSPPGPLPPTPHGPHAR 137
            +G  G N    P   P PR  +G T          GPA  P  P PPG  PP P GP   
Sbjct: 1172 SGKDGANGIPGPIGPPGPRGRSGET----------GPAGPPGNPGPPG--PPGPPGPGID 1219

Query: 138  AETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRR 196
                A  G   + P P    + + A G  R   A  D    ++ N+ E S   P+  R+
Sbjct: 1220 MSAFAGLGPREKGPDPLQYMRADQAAGGLRQHDAEVDATLKSLNNQIE-SIRSPEGSRK 1277



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 23/96 (23%)

Query: 81  GNRGRNRQLRPRTSPKPRAATGTT----VRGA-----------SVKRTGGPAP-AQPSPP 124
           G+ G      P  +P P+  TG T     RGA           +  R G P     P PP
Sbjct: 858 GDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPP 917

Query: 125 GPLPPTPHGPH----ARAETGASPGSPVRQPLPGPA 156
           GP  P P G      AR ++G  PG      L GPA
Sbjct: 918 GP--PGPSGKDGPKGARGDSG-PPGRAGEPGLQGPA 950



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 81  GNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPA----PAQPSPPGPL-PPTPHGPH 135
           G +G   Q      P P+ A G   +       G P     P +    G   PP P GP 
Sbjct: 591 GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPA 650

Query: 136 ARAETGASPGSPVRQPLPGP 155
                  +PG    Q LPGP
Sbjct: 651 GERGEQGAPGPSGFQGLPGP 670



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 20/62 (32%)

Query: 114  GGPAPAQPS----PPGPLPPT-------------PHGPHARA-ETGAS--PGSPVRQPLP 153
            G   PA PS    PPGP+ P+             P GP  R+ ETG +  PG+P     P
Sbjct: 1152 GASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPP 1211

Query: 154  GP 155
            GP
Sbjct: 1212 GP 1213



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 29/105 (27%), Positives = 36/105 (34%), Gaps = 26/105 (24%)

Query: 77  SNSAGNRGRNRQLRPRTSPKPRAATG----------------TTVRGASVKRTGGPAPAQ 120
           + +AG RG + Q  P   P P    G                T  RG    +     P  
Sbjct: 338 AGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGT 397

Query: 121 PSPPGPL-----PPTPHGPHARAETGA-----SPGSPVRQPLPGP 155
           P  PGP      P T   P A+   GA     +PG P  +  PGP
Sbjct: 398 PGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGP 442



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 33/111 (29%), Positives = 41/111 (36%), Gaps = 21/111 (18%)

Query: 73  GIRG-SNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTG--GPAPA-----QPSPP 124
           G RG S  AG +G N        P    A G T R       G  GP+ A     +P PP
Sbjct: 531 GERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPP 590

Query: 125 GPL-------------PPTPHGPHARAETGASPGSPVRQPLPGPAPQREAA 162
           GP              P   +G   +A     PG+P  + LPG   +  AA
Sbjct: 591 GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAA 641


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 19/101 (18%)

Query: 73  GIRG-SNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPT- 130
           G++G S S G  G    + PR  P  R  TG      +    G P PA   PPGP+ P  
Sbjct: 237 GVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPA--GPPGPVGPAG 294

Query: 131 ----PHGPHARAETGAS-----------PGSPVRQPLPGPA 156
               P  P A+ E G +            G P     PGPA
Sbjct: 295 GPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPA 335



 Score = 35.8 bits (81), Expect = 0.044
 Identities = 36/119 (30%), Positives = 46/119 (38%), Gaps = 15/119 (12%)

Query: 80   AGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPA--PAQPSPPGPLPPTPHGPHAR 137
            +G  G N    P   P PR  +G T          GPA  P  P PPG  PP P GP   
Sbjct: 1103 SGKDGANGIPGPIGPPGPRGRSGET----------GPAGPPGNPGPPG--PPGPPGPGID 1150

Query: 138  AETGASPGSPVRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRR 196
                A  G   + P P    + + A G  R   A  D    ++ N+ E S   P+  R+
Sbjct: 1151 MSAFAGLGPREKGPDPLQYMRADQAAGGLRQHDAEVDATLKSLNNQIE-SIRSPEGSRK 1208



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 31/96 (32%), Positives = 37/96 (38%), Gaps = 23/96 (23%)

Query: 81  GNRGRNRQLRPRTSPKPRAATGTT----VRGA-----------SVKRTGGPAP-AQPSPP 124
           G+ G      P  +P P+  TG T     RGA           +  R G P     P PP
Sbjct: 789 GDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPP 848

Query: 125 GPLPPTPHGPH----ARAETGASPGSPVRQPLPGPA 156
           GP  P P G      AR ++G  PG      L GPA
Sbjct: 849 GP--PGPSGKDGPKGARGDSG-PPGRAGEPGLQGPA 881



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 81  GNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTGGPA----PAQPSPPGPL-PPTPHGPH 135
           G +G   Q      P P+ A G   +       G P     P +    G   PP P GP 
Sbjct: 522 GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPA 581

Query: 136 ARAETGASPGSPVRQPLPGP 155
                  +PG    Q LPGP
Sbjct: 582 GERGEQGAPGPSGFQGLPGP 601



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 20/62 (32%)

Query: 114  GGPAPAQPS----PPGPLPPT-------------PHGPHARA-ETGAS--PGSPVRQPLP 153
            G   PA PS    PPGP+ P+             P GP  R+ ETG +  PG+P     P
Sbjct: 1083 GASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPP 1142

Query: 154  GP 155
            GP
Sbjct: 1143 GP 1144



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 29/105 (27%), Positives = 36/105 (34%), Gaps = 26/105 (24%)

Query: 77  SNSAGNRGRNRQLRPRTSPKPRAATG----------------TTVRGASVKRTGGPAPAQ 120
           + +AG RG + Q  P   P P    G                T  RG    +     P  
Sbjct: 269 AGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGT 328

Query: 121 PSPPGPL-----PPTPHGPHARAETGA-----SPGSPVRQPLPGP 155
           P  PGP      P T   P A+   GA     +PG P  +  PGP
Sbjct: 329 PGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGP 373



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 33/111 (29%), Positives = 41/111 (36%), Gaps = 21/111 (18%)

Query: 73  GIRG-SNSAGNRGRNRQLRPRTSPKPRAATGTTVRGASVKRTG--GPAPA-----QPSPP 124
           G RG S  AG +G N        P    A G T R       G  GP+ A     +P PP
Sbjct: 462 GERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPP 521

Query: 125 GPL-------------PPTPHGPHARAETGASPGSPVRQPLPGPAPQREAA 162
           GP              P   +G   +A     PG+P  + LPG   +  AA
Sbjct: 522 GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAA 572


>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
          Length = 1270

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 48/202 (23%), Positives = 65/202 (32%), Gaps = 22/202 (10%)

Query: 93  TSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPL 152
           T+PK  A T       + K     AP +P+P  P  P P  P   A T     SP     
Sbjct: 328 TTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 387

Query: 153 PGPAPQREAAWGRRR-----VERAAEDKEEVAVENKKELSAVCPDAGRRWGQARPDLHAI 207
           P P   + A    +       + A    +E +    KE +   P         +P     
Sbjct: 388 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 447

Query: 208 PAGVPACLRE-------------GKDPGRLLPK--VRLLPKVRLLPRGPHKARQTLQPDP 252
               P   +E              K+P    PK      PK +L P  P K   T  P+ 
Sbjct: 448 KEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPK-KLTPTTPEKLAPT-TPEK 505

Query: 253 DAPPSRMHMRGTLPETHLPERP 274
            AP +   +  T PE   P  P
Sbjct: 506 PAPTTPEELAPTTPEEPTPTTP 527



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 45/205 (21%), Positives = 65/205 (31%), Gaps = 14/205 (6%)

Query: 87  RQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGS 146
           ++L P T+ +P + T       + K T    P +P+P  P  P P  P   A T     +
Sbjct: 597 KELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPA 656

Query: 147 PVRQPLPGPAPQREAAWGRRRVERAAEDK------EEVAVENKKELSAVCPDAGRRWGQA 200
           P       PAP+  A    +       DK      +E A    KE +   P         
Sbjct: 657 PTTP--KKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPE 714

Query: 201 RPDLHAIPAGVPACLRE----GKDPGRLLPKVRLLPKVRLLPRGPHK--ARQTLQPDPDA 254
            P         P   +E     K P    P++   P  + L   P +     T  P    
Sbjct: 715 TPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATK 774

Query: 255 PPSRMHMRGTLPETHLPERPGSTRA 279
           P      +    E  L   P +T A
Sbjct: 775 PEMTTTAKDKTTERDLRTTPETTTA 799



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 53/199 (26%), Positives = 73/199 (36%), Gaps = 26/199 (13%)

Query: 93  TSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPL 152
           T+PK  A T       + K+     P +P+P  P  PTP  P   A T   P +P     
Sbjct: 296 TTPKEPAPT-------TPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEP-APTTPKE 347

Query: 153 PGP-APQREAAWGRRRVERAAEDKEEVAVENKKELSAVCP-DAGRRWGQARPDLHAIPA- 209
           P P AP++ A    +  E A    +E A    KE S   P +      ++ P     PA 
Sbjct: 348 PAPTAPKKPAPTTPK--EPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 405

Query: 210 ----GVPACLRE-----GKDPGRLLPK--VRLLPKVRLLPRGPHKARQTLQPDPDAPPSR 258
                 P   +E      K+P    PK      PK +  P  P +   T   +P AP + 
Sbjct: 406 TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKEPAPTTPKEP-APTTT 463

Query: 259 MHMRGTLPETHLPERPGST 277
                T P+   P  P  T
Sbjct: 464 KKPAPTTPKEPAPTTPKET 482



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 19/69 (27%), Positives = 27/69 (39%)

Query: 93  TSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQPL 152
           T+PK  A T T     +  ++    P +P+P  P  P P  P   A T     +P     
Sbjct: 273 TTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKE 332

Query: 153 PGPAPQREA 161
           P P  +  A
Sbjct: 333 PAPTTKEPA 341



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 19/75 (25%), Positives = 28/75 (37%)

Query: 88  QLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSP 147
           +L P T  KP   T   +   + +      P +P+P  P    P+ P   A T     +P
Sbjct: 497 KLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAP 556

Query: 148 VRQPLPGPAPQREAA 162
                P P   +E A
Sbjct: 557 TTPKEPAPTTPKETA 571



 Score = 32.7 bits (73), Expect = 0.37
 Identities = 48/190 (25%), Positives = 65/190 (34%), Gaps = 26/190 (13%)

Query: 91  PRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQ 150
           P T  +P   T       + K+     P + +P  P  P P  P   A T     +P   
Sbjct: 468 PTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTP 527

Query: 151 PLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRRWGQARPDLHAIPAG 210
             P P   + AA    + E A    +E A    KE +   P         +      P G
Sbjct: 528 EEPAPTTPKAAAPNTPK-EPAPTTPKEPAPTTPKEPAPTTP---------KETAPTTPKG 577

Query: 211 -VPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTL--QPDPDAPPSRMHMRGTLPE 267
             P  L   K+P    PK +  PK  L P    +   T   +P P  P      +GT P 
Sbjct: 578 TAPTTL---KEPAPTTPK-KPAPK-ELAPTTTKEPTSTTCDKPAPTTP------KGTAPT 626

Query: 268 THLPERPGST 277
           T  P+ P  T
Sbjct: 627 T--PKEPAPT 634



 Score = 32.0 bits (71), Expect = 0.63
 Identities = 45/199 (22%), Positives = 62/199 (31%), Gaps = 17/199 (8%)

Query: 93  TSPKPRAATGTTVRGASVK-------RTGGPAPAQPSPPGPLPPTPHGPHARAETGASPG 145
           T+PK  A T T     + K       ++    P +PSP     P P  P   A T     
Sbjct: 383 TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 442

Query: 146 SPVRQPLPGPAPQREAAWGRRRVERAAEDKE-------EVAVENKKELSAVCPDAGRRWG 198
           +P     P P   +E A    +       KE       E A    K+L+   P+      
Sbjct: 443 APTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTT 502

Query: 199 QARPDLHAIPAGVPACLREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQPDPDAPPSR 258
             +P     P  +     E   P          PK    P  P +   T   +P AP + 
Sbjct: 503 PEKP-APTTPEELAPTTPEEPTPTTPEEPAPTTPKA-AAPNTPKEPAPTTPKEP-APTTP 559

Query: 259 MHMRGTLPETHLPERPGST 277
                T P+   P  P  T
Sbjct: 560 KEPAPTTPKETAPTTPKGT 578



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 19/76 (25%), Positives = 27/76 (35%)

Query: 87  RQLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGS 146
           ++L P T  K    T       + +      P +P+P  P  P P  P A A       +
Sbjct: 488 KKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPA 547

Query: 147 PVRQPLPGPAPQREAA 162
           P     P P   +E A
Sbjct: 548 PTTPKEPAPTTPKEPA 563



 Score = 31.6 bits (70), Expect = 0.83
 Identities = 24/103 (23%), Positives = 33/103 (32%), Gaps = 3/103 (2%)

Query: 88  QLRPRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSP 147
           +L P T  +P   T       + K      P +P+P  P  P P  P   A T     +P
Sbjct: 513 ELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAP 572

Query: 148 VRQPLPGPAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVC 190
                  P   +E A       +    KE      K+  S  C
Sbjct: 573 TTPKGTAPTTLKEPA---PTTPKKPAPKELAPTTTKEPTSTTC 612



 Score = 29.6 bits (65), Expect = 3.1
 Identities = 38/183 (20%), Positives = 50/183 (27%), Gaps = 12/183 (6%)

Query: 96  KPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPV-RQPLPG 154
           KP     TT +G ++     P P  P  P    P    P        +P  P        
Sbjct: 196 KPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSA 255

Query: 155 PAPQREAAWGRRRVERAAEDKEEVAVENKKELSAVCPDAGRRWGQARPDLHAIPAGVPAC 214
           P   +E A    +       KE      K+        A     +  P     PA     
Sbjct: 256 PTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTP- 314

Query: 215 LREGKDPGRLLPKVRLLPKVRLLPRGPHKARQTLQPDPDAPPSRMHMRGTLPETHLPERP 274
               K+P    PK          P+ P  A  T +P P  P          P    P+ P
Sbjct: 315 ----KEPAPTTPK----EPTPTTPKEP--APTTKEPAPTTPKEPAPTAPKKPAPTTPKEP 364

Query: 275 GST 277
             T
Sbjct: 365 APT 367



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 17/72 (23%), Positives = 23/72 (31%)

Query: 91  PRTSPKPRAATGTTVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSPVRQ 150
           P T  +P   T       + K+     P +P+P  P    P  P     T     +P   
Sbjct: 444 PTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP 503

Query: 151 PLPGPAPQREAA 162
             P P    E A
Sbjct: 504 EKPAPTTPEELA 515



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 20/70 (28%), Positives = 24/70 (34%), Gaps = 5/70 (7%)

Query: 93  TSPKPRAATGT-----TVRGASVKRTGGPAPAQPSPPGPLPPTPHGPHARAETGASPGSP 147
           T+PK  A T T     T +  +   T  PAP  P  P P       P        +P  P
Sbjct: 242 TTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEP 301

Query: 148 VRQPLPGPAP 157
                  PAP
Sbjct: 302 APTTPKKPAP 311


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,701,903
Number of Sequences: 37866
Number of extensions: 1072173
Number of successful extensions: 17294
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 1257
Number of HSP's that attempted gapping in prelim test: 9469
Number of HSP's gapped (non-prelim): 6399
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.