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Search of human proteins with 19923937
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923937 PHD finger protein 21B isoform 1 [Homo sapiens]
(531 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|19923937 PHD finger protein 21B isoform 1 [Homo sapiens] 1066 0.0
gi|209529726 PHD finger protein 21B isoform 2 [Homo sapiens] 953 0.0
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 286 2e-77
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 263 2e-70
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 70 4e-12
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 70 5e-12
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 70 5e-12
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 70 5e-12
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 70 6e-12
gi|4557293 autoimmune regulator isoform 2 [Homo sapiens] 62 1e-09
gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens] 61 3e-09
gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens] 61 3e-09
gi|4557291 autoimmune regulator isoform 1 [Homo sapiens] 60 5e-09
gi|47419911 transcriptional intermediary factor 1 alpha isoform ... 60 6e-09
gi|38788260 bromodomain PHD finger transcription factor isoform ... 59 1e-08
gi|38788274 bromodomain PHD finger transcription factor isoform ... 59 1e-08
gi|47419909 transcriptional intermediary factor 1 alpha isoform ... 59 1e-08
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 58 2e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 2e-07
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 54 3e-07
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 53 6e-07
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 53 6e-07
gi|209977097 tripartite motif-containing 66 [Homo sapiens] 52 1e-06
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 52 1e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 52 2e-06
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 52 2e-06
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 52 2e-06
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H... 51 3e-06
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 51 3e-06
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 50 4e-06
>gi|19923937 PHD finger protein 21B isoform 1 [Homo sapiens]
Length = 531
Score = 1066 bits (2756), Expect = 0.0
Identities = 531/531 (100%), Positives = 531/531 (100%)
Query: 1 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR 60
MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
Sbjct: 1 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR 60
Query: 61 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV 120
LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
Sbjct: 61 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV 120
Query: 121 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP 180
SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
Sbjct: 121 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP 180
Query: 181 LLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQT 240
LLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQT
Sbjct: 181 LLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQT 240
Query: 241 QPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKR 300
QPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKR
Sbjct: 241 QPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKR 300
Query: 301 QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR 360
QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR
Sbjct: 301 QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR 360
Query: 361 GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYV 420
GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYV
Sbjct: 361 GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYV 420
Query: 421 THKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLD 480
THKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLD
Sbjct: 421 THKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLD 480
Query: 481 RLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN 531
RLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN
Sbjct: 481 RLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN 531
>gi|209529726 PHD finger protein 21B isoform 2 [Homo sapiens]
Length = 489
Score = 953 bits (2463), Expect = 0.0
Identities = 489/531 (92%), Positives = 489/531 (92%), Gaps = 42/531 (7%)
Query: 1 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR 60
MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR
Sbjct: 1 MELQSRPEALAVELARHQNGDLKKQLHERQPRIAALSDKQALGTITAVPVTGPQVSSLQR 60
Query: 61 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV 120
LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV
Sbjct: 61 LAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTV 120
Query: 121 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP 180
SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP
Sbjct: 121 SHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP 180
Query: 181 LLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQT 240
LLISADNK VIIIQPQVQT
Sbjct: 181 LLISADNK------------------------------------------VIIIQPQVQT 198
Query: 241 QPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKR 300
QPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKR
Sbjct: 199 QPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKR 258
Query: 301 QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR 360
QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR
Sbjct: 259 QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR 318
Query: 361 GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYV 420
GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYV
Sbjct: 319 GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYV 378
Query: 421 THKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLD 480
THKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLD
Sbjct: 379 THKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLD 438
Query: 481 RLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN 531
RLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN
Sbjct: 439 RLRALLRLIQGEQLLQVTMTTTSPAPLLAGPWTKPSVAATHPTVQHPQGHN 489
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 286 bits (733), Expect = 2e-77
Identities = 207/645 (32%), Positives = 310/645 (48%), Gaps = 137/645 (21%)
Query: 1 MELQSRPEALAVELARHQ-----------NGDLKKQLHERQPRIAALSDKQALGTITAVP 49
MELQ+ EAL VE+ HQ N DLKKQLHE Q + ITA+
Sbjct: 1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAK------------ITALS 48
Query: 50 VTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKN- 108
+V R ++ Q +P LP + + + +Q P Q +
Sbjct: 49 EKQKRVVEQLRKN----LIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHH 104
Query: 109 -------PSPALPTANNTVSHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAA 161
SP L + TV+ ++ L AA A+ +S ++ P+ A
Sbjct: 105 HAQQSAAASPNLTASQKTVTTASMITTKTLPLVLKAATATMPAS------VVGQRPTIAM 158
Query: 162 AMAPSTAVSVVSDSIKVQPLLISADNK--------------------------------- 188
A ++ +V+S ++ P+ + +K
Sbjct: 159 VTAINSQKAVLSTDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQ 218
Query: 189 --PPPRLLSSPH--PATHHCPLHPSSLPLTP-PSPSLS-------------------PSP 224
PPPRL P+ P P+ +++P+ P P P L+ P+
Sbjct: 219 FIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTS 278
Query: 225 LHGIFQVIIIQPQVQT-----------------------QPESTAESRPPTEEPS--QGA 259
+ I V ++ Q T P++ S+P E+ +
Sbjct: 279 QNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHT 338
Query: 260 QATKKKKEDR---------PPTQENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRSTAN 310
+ +K+ E R P +ENP+K+AFMV+LGLVT +HLEEIQSKRQERKRR+TAN
Sbjct: 339 ETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTAN 398
Query: 311 PAYSG-LLETERKRLASNYLNNPLF--LTARANEDPCWKNEITHDEHCAACKRGANLQPC 367
P YSG + E ERK+ A YLN+ + RANE+ K +I H++ C+ C++ L C
Sbjct: 399 PVYSGAVFEPERKKSAVTYLNSTMHPGTRKRANEEHWPKGDI-HEDFCSVCRKSGQLLMC 457
Query: 368 GTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTGMLAIVHSYVTHKTVKE 427
TC YHL CL+PPLKT PKG+W+CPRCQ + LKK+E +PW G LAIVHSY+ +K KE
Sbjct: 458 DTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKE 517
Query: 428 EEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSLLARQRGTQSSLDRLRALLR 487
EEKQKLL+ S+L+ E +QLE++ ++L++++ KC+E+K ++LARQ+ SSL++++ L+R
Sbjct: 518 EEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQLIR 577
Query: 488 LIQGEQLLQVTMTTTSPAPLLAGP-WTKPSVAATHPTVQHPQGHN 531
LI G L + + + + GP T P+ AAT P +
Sbjct: 578 LIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPSSQS 622
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 263 bits (673), Expect = 2e-70
Identities = 210/683 (30%), Positives = 303/683 (44%), Gaps = 167/683 (24%)
Query: 1 MELQSRPEALAVELARHQ-----------NGDLKKQLH----------ERQPRIAALSDK 39
MELQ+ EAL VE+ HQ N DLKKQLH E+Q R+ K
Sbjct: 1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK 60
Query: 40 QALGT--------ITAVP-----VTGPQVSSLQRL----------AGQGAAVLPQVRP-- 74
+ I +P + Q LQ+L A Q AA P +
Sbjct: 61 NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ 120
Query: 75 KTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALA 134
KT+ S+ K A+VV + P+ A+ TA N+ V + Q
Sbjct: 121 KTVTTASMITTKTLPLVLKAATATMPASVVG-QRPTIAMVTAINSQKAVLSTDVQNT--- 176
Query: 135 EPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKPPPRLL 194
P L + G + N + +T IKV + PPPRL
Sbjct: 177 -PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATP----PQPIKVPQFI------PPPRLT 225
Query: 195 SSPH--PATHHCPLHPSSLPLTP-PSPSLS-------------------PSPLHGIFQVI 232
P+ P P+ +++P+ P P P L+ P+ + I V
Sbjct: 226 PRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVR 285
Query: 233 IIQPQVQT-----------------------QPESTAESRPPTEEPS--QGAQATKKKKE 267
++ Q T P++ S+P E+ + + +K+ E
Sbjct: 286 VVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTE 345
Query: 268 DR---------PPTQENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRSTANPAYSG-LL 317
R P +ENP+K+AFMV+LGLVT +HLEEIQSKRQERKRR+TANP YSG +
Sbjct: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVF 405
Query: 318 ETERKRLASNYLNNPLFLTARANEDPCWKNEIT--------------------------- 350
E ERK+ A YLN+ + R P N +
Sbjct: 406 EPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETTF 465
Query: 351 ---------------------HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKG 389
H++ C+ C++ L C TC YHL CL+PPLKT PKG
Sbjct: 466 TFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKG 525
Query: 390 VWVCPRCQQKALKKDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEE 449
+W+CPRCQ + LKK+E +PW G LAIVHSY+ +K KEEEKQKLL+ S+L+ E +QLE+
Sbjct: 526 MWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQ 585
Query: 450 RDRRLASAVQKCLELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLA 509
+ ++L++++ KC+E+K ++LARQ+ SSL++++ L+RLI G L + + + +
Sbjct: 586 KVKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISN 645
Query: 510 GP-WTKPSVAATHPTVQHPQGHN 531
GP T P+ AAT P +
Sbjct: 646 GPDCTPPANAATSTPAPSPSSQS 668
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 70.5 bits (171), Expect = 4e-12
Identities = 30/62 (48%), Positives = 33/62 (53%)
Query: 341 EDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKA 400
E C + E H E C CK G L C CP +YHL CL PPL P G W+CPRC
Sbjct: 405 EGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPP 464
Query: 401 LK 402
LK
Sbjct: 465 LK 466
Score = 69.7 bits (169), Expect = 6e-12
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 348 EITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGV 407
E H ++C C++G + C TCP AYHL CL+P L+ AP+G W CP C++ EG+
Sbjct: 339 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK------EGI 392
Query: 408 PW 409
W
Sbjct: 393 QW 394
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 70.1 bits (170), Expect = 5e-12
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 337 ARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRC 396
A A E+ E H ++C C++G + C TCP AYHL CL+P L AP+G W CP C
Sbjct: 364 AVAGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Query: 397 QQKALKKDEGVPW 409
++ EGV W
Sbjct: 424 EK------EGVQW 430
Score = 64.3 bits (155), Expect = 3e-10
Identities = 26/57 (45%), Positives = 31/57 (54%)
Query: 346 KNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK 402
+ E H E+C CK G L C C +YH+ CL PPL P G W+CPRC LK
Sbjct: 450 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLK 506
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 70.1 bits (170), Expect = 5e-12
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 337 ARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRC 396
A A E+ E H ++C C++G + C TCP AYHL CL+P L AP+G W CP C
Sbjct: 364 AVAGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Query: 397 QQKALKKDEGVPW 409
++ EGV W
Sbjct: 424 EK------EGVQW 430
Score = 64.3 bits (155), Expect = 3e-10
Identities = 26/57 (45%), Positives = 31/57 (54%)
Query: 346 KNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK 402
+ E H E+C CK G L C C +YH+ CL PPL P G W+CPRC LK
Sbjct: 450 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLK 506
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 70.1 bits (170), Expect = 5e-12
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 337 ARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRC 396
A A E+ E H ++C C++G + C TCP AYHL CL+P L AP+G W CP C
Sbjct: 423 AVAGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 482
Query: 397 QQKALKKDEGVPW 409
++ EGV W
Sbjct: 483 EK------EGVQW 489
Score = 64.3 bits (155), Expect = 3e-10
Identities = 26/57 (45%), Positives = 31/57 (54%)
Query: 346 KNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK 402
+ E H E+C CK G L C C +YH+ CL PPL P G W+CPRC LK
Sbjct: 509 EEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLK 565
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 69.7 bits (169), Expect = 6e-12
Identities = 28/52 (53%), Positives = 31/52 (59%)
Query: 351 HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALK 402
H E C CK G L C TCP +YH+ CL PPL P G W+CPRC ALK
Sbjct: 448 HMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALK 499
Score = 68.2 bits (165), Expect = 2e-11
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 348 EITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGV 407
E H ++C C++G + C TCP AYH+ CL+P ++ AP+G W CP C++ EG+
Sbjct: 366 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK------EGI 419
Query: 408 PW 409
W
Sbjct: 420 QW 421
>gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]
Length = 348
Score = 62.0 bits (149), Expect = 1e-09
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 344 CWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKK 403
C KNE + CA C+ G L C CP A+HL+CL PPL+ P G W C C Q +++
Sbjct: 95 CQKNE----DECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 150
>gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens]
Length = 1004
Score = 60.8 bits (146), Expect = 3e-09
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 315 GLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAY 374
GL+E + LA + + + ++P T+ + C +CK G +L C CP A+
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAF 78
Query: 375 HLSCLEPPL--KTAPKGVWVCPRCQQKALKKDE 405
HL C PPL + P G W+C RC + K+++
Sbjct: 79 HLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQ 111
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 355 CAACKRGANLQP---CGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTG 411
C C R + P C CP +H+ CLEPPL P G W+CP + + + + +
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSN 333
Query: 412 MLAIVHSY---VTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSL 468
+ + V+ VK + ++ ++ + Q ++ R ++ A++ + L
Sbjct: 334 RCQVFDRFQDTVSQHVVKVDFLNRIHKKHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPL 393
Query: 469 LA 470
+A
Sbjct: 394 IA 395
>gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens]
Length = 704
Score = 60.8 bits (146), Expect = 3e-09
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 315 GLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAY 374
GL+E + LA + + + ++P T+ + C +CK G +L C CP A+
Sbjct: 19 GLMEQIQALLAPPKTDEAEKRSRKPEKEPRRSGRATNHDSCDSCKEGGDLLCCDHCPAAF 78
Query: 375 HLSCLEPPL--KTAPKGVWVCPRCQQKALKKDE 405
HL C PPL + P G W+C RC + K+++
Sbjct: 79 HLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQ 111
Score = 50.8 bits (120), Expect = 3e-06
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 355 CAACKRGANLQP---CGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKKDEGVPWTG 411
C C R + P C CP +H+ CLEPPL P G W+CP + + + + +
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHIEHVVLNQKNMTLSN 333
Query: 412 MLAIVHSY---VTHKTVKEEEKQKLLQRGSELQNEHQQLEERDRRLASAVQKCLELKTSL 468
+ + V+ VK + ++ ++ + Q ++ R ++ A++ + L
Sbjct: 334 RCQVFDRFQDTVSQHVVKVDFLNRIHKKHPPNRRVLQSVKRRSLKVPDAIKSQYQFPPPL 393
Query: 469 LA 470
+A
Sbjct: 394 IA 395
>gi|4557291 autoimmune regulator isoform 1 [Homo sapiens]
Length = 545
Score = 60.1 bits (144), Expect = 5e-09
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 351 HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKK 403
+++ CA C+ G L C CP A+HL+CL PPL+ P G W C C Q +++
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 347
>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
[Homo sapiens]
Length = 1050
Score = 59.7 bits (143), Expect = 6e-09
Identities = 103/398 (25%), Positives = 144/398 (36%), Gaps = 97/398 (24%)
Query: 83 PVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGS-----QPQALAEP- 136
P G P Q P Q + +S + P P L N H P P PQ L P
Sbjct: 488 PAPVGLPNPRMQGPIQQPS--ISHQQPPPRLINFQN---HSPKPNGPVLPPHPQQLRYPP 542
Query: 137 -------AALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISA---D 186
A +PL A +A I ++ PST S + S P + SA D
Sbjct: 543 NQNIPRQAIKPNPLQMAFLAQQAIKQWQISSGQGTPSTTNS--TSSTPSSPTITSAAGYD 600
Query: 187 NKP---PPRLLSSPHPATHHCPLHP-----SSLPLT---------------PPS------ 217
K P LSSP +++ P P S++ L PPS
Sbjct: 601 GKAFGSPMIDLSSPVGGSYNLPSLPDIDCSSTIMLDNIVRKDTNIDHGQPRPPSNRTVQS 660
Query: 218 PSLS-PSP-LHGIFQVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKK------EDR 269
P+ S PSP L G + + P +++ S+ SR + S+ A A K E
Sbjct: 661 PNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPI 720
Query: 270 PPTQEN---PEKIAFMVAL------------------GLVTTEHLEEIQSKRQE----RK 304
QEN PE F V + ++T+ L QS E R
Sbjct: 721 RIKQENSGPPENYDFPVVIVKQESDEESRPQNANYPRSILTSLLLNSSQSSTSEETVLRS 780
Query: 305 RRSTANPAYSGLLETERKRLASNYLN----NPLFL-TARANEDPCWKNEITHDEHCAACK 359
+ GL + S +L+ +PL + R +DP +++ CA C+
Sbjct: 781 DAPDSTGDQPGLHQDNSSNGKSEWLDPSQKSPLHVGETRKEDDP-------NEDWCAVCQ 833
Query: 360 RGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQ 397
G L C CP +HLSC P L P G W+C C+
Sbjct: 834 NGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCR 871
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 58.5 bits (140), Expect = 1e-08
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 320 ERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCL 379
E K +L + T A E+ + I +D+HC C + +L C TC YHL C+
Sbjct: 358 ENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECV 417
Query: 380 EPPLKTAPKGVWVCPRC 396
+PPL+ P+ W C C
Sbjct: 418 KPPLEEVPEDEWQCEVC 434
Score = 45.4 bits (106), Expect = 1e-04
Identities = 56/206 (27%), Positives = 79/206 (38%), Gaps = 39/206 (18%)
Query: 120 VSHVPAPGSQPQALAEPAA-----LASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSD 174
V+ +P PG Q A P L +PL++ + +T+ S AA S +S
Sbjct: 2312 VTVLPGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQSKLSP 2371
Query: 175 SIKVQPLLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSP-SPLHGIFQVII 233
++V D PP SS PA ++ P P P P SP
Sbjct: 2372 QMQVHQ-----DKTLPPAQSSSVGPAEAQ---PQTAQPSAQPQPQTQPQSPA-------- 2415
Query: 234 IQPQVQTQPE----STAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVT 289
QP+VQTQPE +T S P+E AQ++K + + Q N V
Sbjct: 2416 -QPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSN------------VQ 2462
Query: 290 TEHLEEIQSKRQERKRRSTANPAYSG 315
+ +QS Q R R ST + G
Sbjct: 2463 GQSPVRVQSPSQTRIRPSTPSQLSPG 2488
Score = 30.0 bits (66), Expect = 5.5
Identities = 48/205 (23%), Positives = 75/205 (36%), Gaps = 41/205 (20%)
Query: 44 TITAVPVTGPQVSSLQRLAGQG--AAVLPQVR---PKTLIP-DSLPVAPGRDRPPKQPPT 97
T T T VS+ G+ + + PQ++ KTL P S V P +P P+
Sbjct: 2343 TATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPS 2402
Query: 98 FQKATVVSVKNPS-------PALPTANNTVSHVP-------APGSQPQALAE-------- 135
Q ++P+ P + T SHVP A S+PQ A+
Sbjct: 2403 AQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQ 2462
Query: 136 ---PAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP---LLISADNKP 189
P + SP + I ++PS + S + S I +QP L I + +P
Sbjct: 2463 GQSPVRVQSPSQT-----RIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQP 2517
Query: 190 --PPRLLSSPHPATHHCPLHPSSLP 212
P+++ + H S P
Sbjct: 2518 QSQPQVVMKHNAVIEHLKQKKSMTP 2542
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 58.5 bits (140), Expect = 1e-08
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 320 ERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCL 379
E K +L + T A E+ + I +D+HC C + +L C TC YHL C+
Sbjct: 358 ENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECV 417
Query: 380 EPPLKTAPKGVWVCPRC 396
+PPL+ P+ W C C
Sbjct: 418 KPPLEEVPEDEWQCEVC 434
Score = 45.4 bits (106), Expect = 1e-04
Identities = 56/206 (27%), Positives = 79/206 (38%), Gaps = 39/206 (18%)
Query: 120 VSHVPAPGSQPQALAEPAA-----LASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSD 174
V+ +P PG Q A P L +PL++ + +T+ S AA S +S
Sbjct: 2186 VTVLPGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQSKLSP 2245
Query: 175 SIKVQPLLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSP-SPLHGIFQVII 233
++V D PP SS PA ++ P P P P SP
Sbjct: 2246 QMQVHQ-----DKTLPPAQSSSVGPAEAQ---PQTAQPSAQPQPQTQPQSPA-------- 2289
Query: 234 IQPQVQTQPE----STAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVT 289
QP+VQTQPE +T S P+E AQ++K + + Q N V
Sbjct: 2290 -QPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSN------------VQ 2336
Query: 290 TEHLEEIQSKRQERKRRSTANPAYSG 315
+ +QS Q R R ST + G
Sbjct: 2337 GQSPVRVQSPSQTRIRPSTPSQLSPG 2362
Score = 35.4 bits (80), Expect = 0.13
Identities = 71/308 (23%), Positives = 116/308 (37%), Gaps = 55/308 (17%)
Query: 44 TITAVPVTGPQVSSLQRLAGQG--AAVLPQVR---PKTLIP-DSLPVAPGRDRPPKQPPT 97
T T T VS+ G+ + + PQ++ KTL P S V P +P P+
Sbjct: 2217 TATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPS 2276
Query: 98 FQKATVVSVKNPS-------PALPTANNTVSHVP-------APGSQPQALAE-------- 135
Q ++P+ P + T SHVP A S+PQ A+
Sbjct: 2277 AQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQ 2336
Query: 136 ---PAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQP---LLISADNKP 189
P + SP + I ++PS + S + S I +QP L I + +P
Sbjct: 2337 GQSPVRVQSPSQT-----RIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQP 2391
Query: 190 --PPRLLSSPHPATHHCPLH--PSSLPLTPPSPSLSPSPLHGIFQVIII-QPQVQTQPES 244
P++ SS + L+ S P P P P QVI + Q Q Q Q S
Sbjct: 2392 QSQPQVQSSTQTLSSGQTLNQVTVSSPSRPQLQIQQPQP-----QVIAVPQLQQQVQVLS 2446
Query: 245 TAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTT------EHLEEIQS 298
+S+ + +Q + ++ K P + + +VT E L+ +Q
Sbjct: 2447 QIQSQVVAQIQAQQSGVPQQIKLQLPIQIQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQ 2506
Query: 299 KRQERKRR 306
R +++++
Sbjct: 2507 LRDQQQKK 2514
Score = 30.4 bits (67), Expect = 4.2
Identities = 63/306 (20%), Positives = 110/306 (35%), Gaps = 32/306 (10%)
Query: 30 QPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPV---AP 86
QP + + Q T+++ + Q + Q Q AA Q +P++ + PV +P
Sbjct: 2290 QPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAA---QSQPQSNVQGQSPVRVQSP 2346
Query: 87 GRDR-----PPKQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEPAALAS 141
+ R P + P Q + P P P + + P SQPQ +
Sbjct: 2347 SQTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSS----TQ 2402
Query: 142 PLSSAGVAYAIISTSPSNAAAMAPSTAVSVVS-DSIKVQPLLISADNKPPPRLLSSPHPA 200
LSS + +SPS V++ ++ Q ++S + +
Sbjct: 2403 TLSSGQTLNQVTVSSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSG 2462
Query: 201 THHCPLHPSSLPLTPPSPSLSPSPL--HGIFQVIIIQ-PQVQTQPESTAESRPPTEEPSQ 257
P + L P S + H I V+ +Q VQ Q + + R ++ Q
Sbjct: 2463 V------PQQIKLQLPIQIQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQ 2516
Query: 258 GAQATKKKKEDRPPTQENPEKIAFMVAL-GLVTTEHLEEIQS----KRQERKRRSTANPA 312
Q + K+E E I V + EHL++ +S +R+E +R N
Sbjct: 2517 --QQIEIKREHTLQASNQSEIIQKQVVMKHNAVIEHLKQKKSMTPAEREENQRMIVCNQV 2574
Query: 313 YSGLLE 318
+L+
Sbjct: 2575 MKYILD 2580
>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
[Homo sapiens]
Length = 1016
Score = 58.5 bits (140), Expect = 1e-08
Identities = 107/435 (24%), Positives = 154/435 (35%), Gaps = 108/435 (24%)
Query: 59 QRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPP---------KQPPTFQKATV----VS 105
Q + G+ V+ + +P PV +PP K P A + +
Sbjct: 415 QNIINLGSLVIEDKESQPQMPKQNPVVEQNSQPPSGLSSNQLSKFPTQISLAQLRLQHMQ 474
Query: 106 VKNPSPALPTANNTVSHVPAPGS-----QPQALAEP--------AALASPLSSAGVAYAI 152
+ P P L N H P P PQ L P A +PL A +A
Sbjct: 475 QQQPPPRLINFQN---HSPKPNGPVLPPHPQQLRYPPNQNIPRQAIKPNPLQMAFLAQQA 531
Query: 153 ISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISA---DNKP---PPRLLSSPHPATHHCPL 206
I ++ PST S + S P + SA D K P LSSP +++ P
Sbjct: 532 IKQWQISSGQGTPSTTNS--TSSTPSSPTITSAAGYDGKAFGSPMIDLSSPVGGSYNLPS 589
Query: 207 HP-----SSLPLT---------------PPS------PSLS-PSP-LHGIFQVIIIQPQV 238
P S++ L PPS P+ S PSP L G + + P +
Sbjct: 590 LPDIDCSSTIMLDNIVRKDTNIDHGQPRPPSNRTVQSPNSSVPSPGLAGPVTMTSVHPPI 649
Query: 239 QTQPESTAESRPPTEEPSQGAQATKKKK------EDRPPTQEN---PEKIAFMVAL---- 285
++ S+ SR + S+ A A K E QEN PE F V +
Sbjct: 650 RSPSASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPIRIKQENSGPPENYDFPVVIVKQE 709
Query: 286 --------------GLVTTEHLEEIQSKRQE----RKRRSTANPAYSGLLETERKRLASN 327
++T+ L QS E R + GL + S
Sbjct: 710 SDEESRPQNANYPRSILTSLLLNSSQSSTSEETVLRSDAPDSTGDQPGLHQDNSSNGKSE 769
Query: 328 YLN----NPLFL-TARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPP 382
+L+ +PL + R +DP +++ CA C+ G L C CP +HLSC P
Sbjct: 770 WLDPSQKSPLHVGETRKEDDP-------NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPT 822
Query: 383 LKTAPKGVWVCPRCQ 397
L P G W+C C+
Sbjct: 823 LTNFPSGEWICTFCR 837
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 58.2 bits (139), Expect = 2e-08
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 53 PQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAP-GRDRPPKQPPTFQKATVVSVKNPSP 111
P ++ R G + RP TL P LP G R P PT + + V +PSP
Sbjct: 1325 PPLAPAPRPPSSGLPAVLNPRP-TLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPSP 1383
Query: 112 --------ALPTANNTVSHVPA----PGSQPQALAEPAALASPLSSAGVAYAIISTSPSN 159
A P ++ HVP+ P S P + + LASP+SS V+ + S+ P +
Sbjct: 1384 EVSASAPGAAPLTISSPLHVPSSLPGPASSPMPIPNSSPLASPVSST-VSVPLSSSLPIS 1442
Query: 160 AAAMAPSTAVSVVSDSIKVQPLLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPS 219
P+ A + ++ I PL +SA P LL+S P PL P +P P PS
Sbjct: 1443 VPTTLPAPASAPLTIPISA-PLTVSASG---PALLTSVTP-----PLAP-VVPAAPGPPS 1492
Query: 220 LSPS 223
L+PS
Sbjct: 1493 LAPS 1496
Score = 43.5 bits (101), Expect = 5e-04
Identities = 68/241 (28%), Positives = 93/241 (38%), Gaps = 58/241 (24%)
Query: 47 AVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPP---------- 96
+ P+T P +S+ ++ G A+L V P PV P PP P
Sbjct: 1452 SAPLTIP-ISAPLTVSASGPALLTSVTPPLA-----PVVPAAPGPPSLAPSGASPSASAL 1505
Query: 97 TFQKATVVSVKNP-SPALPTA-NNTVSHVP------APGSQP-----QALAEP------- 136
T AT S+ + +P P T SHVP AP P ALA P
Sbjct: 1506 TLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNP 1565
Query: 137 ----AALASPLSSAGVAYA------------IISTSPSNAAA----MAPSTAVSVVSDSI 176
A+L +P SSA A A I++ SP+ A +APS + V S
Sbjct: 1566 APAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASS 1625
Query: 177 KVQPLLISADNKPPPRLLSSPHPATHHCP-LHPSSLPLTPPSPSLSPSPLHGIFQVIIIQ 235
+ P+ + A + P L+S P P L PSS P+P SP P Q + +
Sbjct: 1626 QT-PVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALA 1684
Query: 236 P 236
P
Sbjct: 1685 P 1685
Score = 37.0 bits (84), Expect = 0.045
Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 27/252 (10%)
Query: 31 PRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDR 90
P +A S + L P+ P + LA A L P +L + G +
Sbjct: 1653 PVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPS----QTLSLGTGNPQ 1708
Query: 91 PPKQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQ-----ALAEPAALASPLSS 145
P T +S+ S +PT T+S P P P A A P A ASP+
Sbjct: 1709 GPFPTQT------LSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGP 1762
Query: 146 AGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKPPPRLLSSPHPATHHCP 205
A ++ + S+A+ +AP++ ++ V L P + PA+ P
Sbjct: 1763 APAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTL------GPAAAQTLALAPASTQSP 1816
Query: 206 LHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQTQPES-TAESRPPTEEPSQGAQATKK 264
+S L + +P P+ + ++ P + +P++ T S PP+ + + +
Sbjct: 1817 ASQAS-SLVVSASGAAPLPVTMVSRL----PVSKDEPDTLTLRSGPPSPPSTATSFGGPR 1871
Query: 265 KKEDRPPTQENP 276
+ PP +P
Sbjct: 1872 PRRQPPPPPRSP 1883
Score = 35.8 bits (81), Expect = 0.100
Identities = 54/270 (20%), Positives = 95/270 (35%), Gaps = 40/270 (14%)
Query: 45 ITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVV 104
+ A + P+ L +A + L V PK L+P ++ + P ++ P+ T+
Sbjct: 2553 LCAQALASPESLELASVASSETSSLSLVPPKDLLPVAVEILPVSEKNLSLTPSAPSLTL- 2611
Query: 105 SVKNPSPALPTANNTVSHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMA 164
+ ++P + A G+ L E L + S SN +
Sbjct: 2612 ----EAGSIPNGQEQEAPDSAEGTTLTVLPEGEELP------------LCVSESNGLELP 2655
Query: 165 PSTAVSVVSDSIKVQPLLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSP 224
PS A SD +PL AD + ++ P + + PS S S +
Sbjct: 2656 PSAA----SDEPLQEPL--EADRTSEELTEAKTPTSSPEKPQELVTAEVAAPSTSSSAT- 2708
Query: 225 LHGIFQVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVA 284
+ PE + +RPP S + + + RP P+ + +
Sbjct: 2709 ---------------SSPEGPSPARPPRRRTSADVE-IRGQGTGRPGQPPGPKVLRKLPG 2752
Query: 285 LGLVTTEHLEEIQSKRQERKRRSTANPAYS 314
+ E E ++ +RQ+R ST P S
Sbjct: 2753 RLVTVVEEKELVRRRRQQRGAASTLVPGVS 2782
Score = 34.3 bits (77), Expect = 0.29
Identities = 45/169 (26%), Positives = 63/169 (37%), Gaps = 19/169 (11%)
Query: 64 QGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTVSHV 123
Q A P P +++P S P P + V N V
Sbjct: 1261 QAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTG----VVKIVVRQA 1316
Query: 124 PAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPS----TAVSVVSDSIKVQ 179
P G P P A A S+G+ A+++ P+ P+ TA + + V+
Sbjct: 1317 PRDGLTP---VPPLAPAPRPPSSGLP-AVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVR 1372
Query: 180 PLLISADNKPPPRLLSSPH--PATHHCPLH-PSSLPLTPPSPSLSPSPL 225
PLL + P S+P P T PLH PSSLP P+ SP P+
Sbjct: 1373 PLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLP----GPASSPMPI 1417
Score = 33.1 bits (74), Expect = 0.65
Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 18/172 (10%)
Query: 74 PKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQAL 133
P + P P + P P + +VS P L A+ V P QP +
Sbjct: 1021 PVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSG 1080
Query: 134 AEPAALASPL----SSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKP 189
+ P L SPL ++ +S P+ A + S A S S+ ++PL +
Sbjct: 1081 SLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSL-LKPLTV------ 1133
Query: 190 PPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQTQ 241
PP P AT ++ P+P+ +P Q +I+ P +Q +
Sbjct: 1134 PPGYTFPPAAATTTSTTTATATTTAVPAPTPAP-------QRLILSPDMQAR 1178
Score = 31.2 bits (69), Expect = 2.5
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 157 PSNAAAMAPSTAVSVVSDSIKVQPLLISADNKP---PPRLLSSPHPATHHCPLHPSSLPL 213
P A AP+ ++V + P+ ISA N P +L SP P + + P S P
Sbjct: 2443 PRPTPASAPAAIPALVPVPVSA-PVPISAPNPITILPVHILPSPPPPSQ---IPPCSSPA 2498
Query: 214 TPPSPSLSPSPLH 226
P P+ +P P H
Sbjct: 2499 CTPPPACTPPPAH 2511
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 54.7 bits (130), Expect = 2e-07
Identities = 60/231 (25%), Positives = 84/231 (36%), Gaps = 30/231 (12%)
Query: 49 PVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKN 108
P T P L Q A LP P P SL P PP PP+ ++ S
Sbjct: 318 PPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS---PPATPPSQATTSLGS--- 371
Query: 109 PSPALPTANNTVSHVPAPGSQPQALAEPAA---LASPLSSAGVAYAIISTSPSNAAAMAP 165
PT T S +P+P P A P A LA P A SP + ++P
Sbjct: 372 -----PTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQA-------PPSPPASPPLSP 419
Query: 166 STAVSVVSDSIKVQPLLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPL 225
S + + LL + + PP + +P P+ PS+ P + PSL+ PL
Sbjct: 420 LATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPL 479
Query: 226 HGIFQVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENP 276
+ P P + + PP + P A + +PP Q P
Sbjct: 480 Q-------VPPSPPASPPMSPSATPPPQAPP--PLAAPPLQLAKPPPQAPP 521
Score = 47.8 bits (112), Expect = 3e-05
Identities = 56/204 (27%), Positives = 79/204 (38%), Gaps = 22/204 (10%)
Query: 66 AAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPT-------ANN 118
A LP ++ P S P++P P+ P + + +P P+ P A+
Sbjct: 399 ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 458
Query: 119 TVSHVPAPGSQ-PQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIK 177
VS P SQ P +LA P P A + +T P A + + + +
Sbjct: 459 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQ 518
Query: 178 VQPLLISADNKPPPRLLSSPHPATH--HCPLHPS-SLPLTP---PSPSLSPSPLHGIFQV 231
P L + PP + L SP PA+ P PS SLP++P P P P + QV
Sbjct: 519 APPALAT----PPLQALPSP-PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 573
Query: 232 IIIQPQVQTQPESTAESRPPTEEP 255
P P A RPPT P
Sbjct: 574 ---PPSPPASPTLQAPRRPPTPGP 594
Score = 43.1 bits (100), Expect = 6e-04
Identities = 67/286 (23%), Positives = 109/286 (38%), Gaps = 41/286 (14%)
Query: 30 QPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVR-------PKTLIPDSL 82
+PR ++++ + + T P ++ +R + G P R P + S
Sbjct: 197 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG 256
Query: 83 PVAPGRDRPPKQPPTFQKATVVSVKNP---------SPALPTANNTVSHVPAPGSQPQAL 133
P A G R P P + + +++ P +PAL +++ P+P + Q+
Sbjct: 257 PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQ 316
Query: 134 AEPAALASPLSSA-----GVAYAIISTSPSNAAAM-----APSTAVSVVSDSIKVQPLLI 183
A P A+P SS+ + SPS ++ P+T S + S+ L
Sbjct: 317 APPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQA 376
Query: 184 SADNKPPPRL--LSSP----HPATHHCPLH-PSSLPLTPP-SPSLSPSP-LHGIFQVIII 234
+ P P L L++P PA PL P S P +PP SP +PSP V ++
Sbjct: 377 THSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL 436
Query: 235 QPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIA 280
Q P PP + P + PP+Q P A
Sbjct: 437 QAPFSPPPS------PPVQAPFSPPASPPVSPSATPPSQAPPSLAA 476
Score = 30.8 bits (68), Expect = 3.2
Identities = 46/194 (23%), Positives = 66/194 (34%), Gaps = 44/194 (22%)
Query: 85 APG--RDRPPKQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEPAALASP 142
APG RPP P + P P P A + A G +P LAE A
Sbjct: 21 APGLLTPRPPGSP-----------RPPPPVTPAALRVLGAAGAVGRKP--LAERAG---- 63
Query: 143 LSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKPPPRLLSSPHPATH 202
G+ A I P +A P+ + S + +P + PP +SP P +
Sbjct: 64 ----GIGGATI---PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVS- 115
Query: 203 HCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQTQPESTAESRPPTEEPSQGAQAT 262
P S + P PL Q ++ E T TE P + A +
Sbjct: 116 ----SPGR-----ASGTTRPGPLG--------QKGLRISAEETVARGKATEAPKRSALSA 158
Query: 263 KKKKEDRPPTQENP 276
+++ PT P
Sbjct: 159 GARRDTSGPTPGTP 172
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 54.3 bits (129), Expect = 3e-07
Identities = 74/349 (21%), Positives = 126/349 (36%), Gaps = 48/349 (13%)
Query: 128 SQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADN 187
+Q + EP+ + + Y ++ + A+ T+ + IK+ + S
Sbjct: 686 AQTSGIEEPSETKGSMQKSKFKYKLVPEEETTASENTEITSERQ-KEGIKLTIRISSRKK 744
Query: 188 KP--PPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQTQPEST 245
KP PP++L + T +L SP + + + Q +
Sbjct: 745 KPDSPPKVLEPENKQEKT----EKEEEKTNVGRTLRRSPRISRPTAKVAEIRDQKADKKR 800
Query: 246 AESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVT-----TEHLEEIQSKR 300
E EE S Q T KK+ + ++ K++ + G V T + S
Sbjct: 801 GEGEDEVEEESTALQKTDKKEILKKSEKDTNSKVSKVKPKGKVRWTGSRTRGRWKYSSND 860
Query: 301 QERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAACKR 360
+ S + A S E E K L + +++PC K C
Sbjct: 861 ESEGSGSEKSSAASE--EEEEKESEEAILAD--------DDEPCKK--------CGLPNH 902
Query: 361 GANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKAL--KKDEGVPWTGMLAIVHS 418
+ C +C YH +CL PPL P G W CP CQ K L K +E L +
Sbjct: 903 PELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEE------QLQDLDV 956
Query: 419 YVTHKTVKEEEKQKLLQRGSELQN----------EHQQLEERDRRLASA 457
+ K E K++L+ G ++N E Q+ +++D + + A
Sbjct: 957 ALKKKERAERRKERLVYVGISIENIIPPQEPDFSEDQEEKKKDSKKSKA 1005
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 53.1 bits (126), Expect = 6e-07
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 336 TARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPR 395
+AR D K++ +++ CA C+ G +L C CP +HL+C P L + P G W+C
Sbjct: 871 SARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTF 930
Query: 396 CQ 397
C+
Sbjct: 931 CR 932
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 53.1 bits (126), Expect = 6e-07
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 336 TARANEDPCWKNEITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPR 395
+AR D K++ +++ CA C+ G +L C CP +HL+C P L + P G W+C
Sbjct: 871 SARIGGDGNNKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTF 930
Query: 396 CQ 397
C+
Sbjct: 931 CR 932
>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
Length = 1216
Score = 52.0 bits (123), Expect = 1e-06
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 349 ITHDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQ 397
I +++ CA C G L C CP +HLSC P L + P G WVC C+
Sbjct: 967 IENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCR 1015
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 52.0 bits (123), Expect = 1e-06
Identities = 49/174 (28%), Positives = 64/174 (36%), Gaps = 42/174 (24%)
Query: 238 VQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQ 297
++T P+ T SR +EP K +D PP P+KI +
Sbjct: 790 METLPDGTKRSRRQIKEP------VKFVPQDVPP---EPKKIPIRNTRTRGRKRSFVPEE 840
Query: 298 SKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEITHDEHCAA 357
K +ER R ER++ S P K E E CA
Sbjct: 841 EKHEERVPR-------------ERRQRQSVLQKKP-------------KAEDLRTE-CAT 873
Query: 358 CKR---GANLQPCGTCPGAYHLSCLEPPLKTAPKGV---WVCPRCQQKALKKDE 405
CK NL C C YH CL+PPLK +PK W+C C + K+DE
Sbjct: 874 CKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDSSSSKEDE 927
Score = 45.1 bits (105), Expect = 2e-04
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 22/123 (17%)
Query: 291 EHLEEIQSKRQERKRRSTANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEIT 350
E LEE+Q+ + + A G R+ LN P L A P K T
Sbjct: 663 ESLEELQNLNGKLRSEGQGIWALLG-------RITGQKLNIPAILRAPKERKPSKKEGGT 715
Query: 351 HDEH--------CAACKRGAN---LQPCGTCPGAYHLSCLEPPLKTAPK----GVWVCPR 395
C CK+ + L C TC YHL CL+PPL P+ W C
Sbjct: 716 QKTSTLPAVLYSCGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSE 775
Query: 396 CQQ 398
C Q
Sbjct: 776 CDQ 778
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 51.6 bits (122), Expect = 2e-06
Identities = 60/233 (25%), Positives = 84/233 (36%), Gaps = 36/233 (15%)
Query: 47 AVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSV 106
A P GP SS A P P P SL P PP PP+ ++ S
Sbjct: 283 AAPALGPLSSSPL------ATPSPSAPPSPSAPPSLQTLPS---PPATPPSQATTSLGS- 332
Query: 107 KNPSPALPTANNTVSHVPAPGSQPQALAEPAA---LASPLSSAGVAYAIISTSPSNAAAM 163
PT T S +P+P P A P A LA P A SP + +
Sbjct: 333 -------PTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQA-------PPSPPASPPL 378
Query: 164 APSTAVSVVSDSIKVQPLLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPSPSLSPS 223
+P S + + LL + + PP + +P P+ PS+ P + PSL+
Sbjct: 379 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP 438
Query: 224 PLHGIFQVIIIQPQVQTQPESTAESRPPTEEPSQGAQATKKKKEDRPPTQENP 276
PL + P P + + PP + P A + +PP Q P
Sbjct: 439 PLQ-------VPPSPPASPPMSPSATPPPQAPP--PLAAPPLQLAKPPPQAPP 482
Score = 47.8 bits (112), Expect = 3e-05
Identities = 56/204 (27%), Positives = 79/204 (38%), Gaps = 22/204 (10%)
Query: 66 AAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPT-------ANN 118
A LP ++ P S P++P P+ P + + +P P+ P A+
Sbjct: 360 ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 419
Query: 119 TVSHVPAPGSQ-PQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIK 177
VS P SQ P +LA P P A + +T P A + + + +
Sbjct: 420 PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQ 479
Query: 178 VQPLLISADNKPPPRLLSSPHPATH--HCPLHPS-SLPLTP---PSPSLSPSPLHGIFQV 231
P L + PP + L SP PA+ P PS SLP++P P P P + QV
Sbjct: 480 APPALAT----PPLQALPSP-PASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 534
Query: 232 IIIQPQVQTQPESTAESRPPTEEP 255
P P A RPPT P
Sbjct: 535 ---PPSPPASPTLQAPRRPPTPGP 555
Score = 46.2 bits (108), Expect = 7e-05
Identities = 60/269 (22%), Positives = 95/269 (35%), Gaps = 37/269 (13%)
Query: 30 QPRIAALSDKQALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVR-------PKTLIPDSL 82
+PR ++++ + + T P ++ +R + G P R P + S
Sbjct: 188 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG 247
Query: 83 PVAPGRDRPPKQPPTFQKATVVSVKNP---------SPALPTANNTVSHVPAPGSQPQAL 133
P A G R P P + + +++ P +PAL +++ P+P + P
Sbjct: 248 PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPS 307
Query: 134 AEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPL--LISADNKPPP 191
A P+ P A T PS A S + + PL L + + PP
Sbjct: 308 APPSLQTLPSPPA--------TPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP 359
Query: 192 RLLSSPHPATHHCPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQTQPESTAESRPP 251
L P A P P PL PSP +P+ L V ++Q P PP
Sbjct: 360 ALALPPLQAPPSPPASPPLSPLATPSPQ-APNAL----AVHLLQAPFSPPPS------PP 408
Query: 252 TEEPSQGAQATKKKKEDRPPTQENPEKIA 280
+ P + PP+Q P A
Sbjct: 409 VQAPFSPPASPPVSPSATPPSQAPPSLAA 437
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform b
[Homo sapiens]
Length = 1524
Score = 51.6 bits (122), Expect = 2e-06
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 307 STANPAYSGLLETERKRLASNYLNNPLFL-TARANEDPCWKNEITHDEHCAACKR---GA 362
S + +Y +L+ R+ L S+ + +FL + + W I + C C++
Sbjct: 1071 SDSGRSYKTVLDRWRESLLSSASLSQVFLHLSTLDRSVIWSKSILN-ARCKICRKKGDAE 1129
Query: 363 NLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQK 399
N+ C C +H C+ P LKT P+G W CP C+ K
Sbjct: 1130 NMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPK 1166
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform a
[Homo sapiens]
Length = 1556
Score = 51.6 bits (122), Expect = 2e-06
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 307 STANPAYSGLLETERKRLASNYLNNPLFL-TARANEDPCWKNEITHDEHCAACKR---GA 362
S + +Y +L+ R+ L S+ + +FL + + W I + C C++
Sbjct: 1103 SDSGRSYKTVLDRWRESLLSSASLSQVFLHLSTLDRSVIWSKSILN-ARCKICRKKGDAE 1161
Query: 363 NLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQK 399
N+ C C +H C+ P LKT P+G W CP C+ K
Sbjct: 1162 NMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPK 1198
>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
sapiens]
Length = 1379
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 355 CAACKRGAN---LQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKK 403
C C RG L C C YH+ CL PPL PKGVW CP+C K+
Sbjct: 260 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKR 311
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 50.8 bits (120), Expect = 3e-06
Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 355 CAACKRGAN---LQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKK 403
C C RG L C C YH+ CL PPL PKGVW CP+C K+
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKR 378
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 50.4 bits (119), Expect = 4e-06
Identities = 62/237 (26%), Positives = 92/237 (38%), Gaps = 12/237 (5%)
Query: 40 QALGTITAVPVTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQ 99
Q + + VP P + G A + P P+ + V P P PP
Sbjct: 747 QPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMPPIPVVPPITP 806
Query: 100 KATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTS-PS 158
A + + P LPTA TV VP P A+ P +LA+PL A A + + P
Sbjct: 807 LAGIDGLPPALPDLPTA--TVPPVPPPQYFSPAVILP-SLAAPLPPASPALPLQAVKLPH 863
Query: 159 NAAAMAPSTAVSVVSDSIKVQPLLISADNKPPPRLLSSPHPATHHC---PLHPSSLPLTP 215
A ++V ++ PLL A PP S H A P++P++ P
Sbjct: 864 PPGAPLAMPCRTIVPNAPATIPLLAVA---PPGVAALSIHSAVAQLPGQPVYPAAFPQMA 920
Query: 216 PSPSLSPSPLHGIFQVIIIQPQVQTQPESTAESRPP-TEEPSQGAQATKKKKEDRPP 271
P+ + PSP H + + PQ P+ T +P +P+ Q + RPP
Sbjct: 921 PT-DVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPP 976
Score = 48.5 bits (114), Expect = 1e-05
Identities = 59/219 (26%), Positives = 81/219 (36%), Gaps = 32/219 (14%)
Query: 68 VLPQVRPKTLI---PDSLPVAPGRDRPPKQPPTFQKATVV--SVKNP----SPALPTANN 118
V+P + P I P +LP P PP PP + V+ S+ P SPALP
Sbjct: 800 VVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAV 859
Query: 119 TVSHVP--------------APGSQPQ-ALAEPAALASPLSSAGVAYAIISTSPSNAAAM 163
+ H P AP + P A+A P A + SA P+ M
Sbjct: 860 KLPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQM 919
Query: 164 APSTAVSVVSDSIK------VQPLLISADNKPPPRLLSSPHPATHHCPLHPSSLPLTPPS 217
AP+ +++ QP L PP +L P P P+ P P PP
Sbjct: 920 APTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLP-PQPTLPPQPVLPPQ-PTRPPQ 977
Query: 218 PSLSPSPLHGIFQVIIIQPQVQTQPESTAESRPPTEEPS 256
P L P P+ V+ QP + +PE P P+
Sbjct: 978 PVLPPQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPA 1016
Score = 44.3 bits (103), Expect = 3e-04
Identities = 50/184 (27%), Positives = 67/184 (36%), Gaps = 27/184 (14%)
Query: 79 PDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPT----ANNTVSHVPAPGSQPQALA 134
P + P AP P PP T + +PA T A+ T S PG+ PQ L
Sbjct: 1373 PSNPPGAPPAPLAPSSPPV----TALPQDGAAPATSTMPEPASGTASQAGGPGT-PQGLT 1427
Query: 135 EPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSD-SIKVQPLLISADNKPPPRL 193
+ PL+ A + A P+ + D S +PL PPP
Sbjct: 1428 SELETSQPLAETHEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREPL-------PPPAP 1480
Query: 194 LSSPHPATHH------CPLHPSSLPLTPPSPSLSPSPLHGIFQVIIIQPQVQTQPESTAE 247
SPH T PL P+++ + S PSP G + PQ + ES E
Sbjct: 1481 EPSPHSGTPQPALGQPAPLLPAAVGAVSLATSQLPSPPLG----PTVPPQPPSALESDGE 1536
Query: 248 SRPP 251
PP
Sbjct: 1537 GPPP 1540
Score = 35.4 bits (80), Expect = 0.13
Identities = 48/204 (23%), Positives = 75/204 (36%), Gaps = 45/204 (22%)
Query: 70 PQVRPKTLIPDSLPVAPGRDRP-------------PKQPPTFQKATVVSVKNPSPALPTA 116
P V ++P SLP +P P PP+ Q+ + +P LP
Sbjct: 654 PPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPP 713
Query: 117 NNTVSHVPA----PGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVV 172
+ + P PG QP LA+P L L+ V + P +AP++ V
Sbjct: 714 STPMPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVV-PLQPVPPHLPPYLAPASQVGAP 772
Query: 173 SDSIKVQPLLISADNKPPPRLLSSPHPATHHCPLHPSSL--PLTPPSPSLSP-SPLHGIF 229
+ +++PL + PL P + P PP P + P +PL GI
Sbjct: 773 A---QLKPLQMP------------------QAPLQPLAQVPPQMPPIPVVPPITPLAGID 811
Query: 230 QVIIIQPQVQTQPESTAESRPPTE 253
+ P + P +T PP +
Sbjct: 812 G---LPPALPDLPTATVPPVPPPQ 832
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,665,140
Number of Sequences: 37866
Number of extensions: 1428049
Number of successful extensions: 11100
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 868
Number of HSP's that attempted gapping in prelim test: 8333
Number of HSP's gapped (non-prelim): 3021
length of query: 531
length of database: 18,247,518
effective HSP length: 107
effective length of query: 424
effective length of database: 14,195,856
effective search space: 6019042944
effective search space used: 6019042944
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.