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Search of human proteins with 197927133
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197927133 hypothetical protein LOC84970 isoform a [Homo
sapiens]
(598 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens] 1234 0.0
gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens] 857 0.0
gi|150170670 piccolo isoform 2 [Homo sapiens] 41 0.003
gi|150378539 piccolo isoform 1 [Homo sapiens] 41 0.003
gi|171543895 ataxin 2 [Homo sapiens] 38 0.030
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 37 0.068
gi|110349719 titin isoform N2-A [Homo sapiens] 36 0.12
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 35 0.15
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 35 0.15
gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 35 0.15
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 35 0.15
gi|39930575 shisa homolog 4 [Homo sapiens] 35 0.15
gi|241982780 programmed cell death 6 interacting protein isoform... 35 0.20
gi|22027538 programmed cell death 6 interacting protein isoform ... 35 0.20
gi|55749678 ninein-like [Homo sapiens] 35 0.20
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 35 0.20
gi|139394604 bromo adjacent homology domain containing 1 [Homo s... 35 0.20
gi|13259529 survival of motor neuron 2, centromeric isoform b [H... 35 0.26
gi|13259531 survival of motor neuron 2, centromeric isoform c [H... 35 0.26
gi|13259512 survival of motor neuron 1, telomeric isoform b [Hom... 35 0.26
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.26
gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens] 34 0.34
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens] 34 0.34
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 34 0.34
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 34 0.34
gi|15721939 metastatic lymph node 51 [Homo sapiens] 34 0.34
gi|33667044 ABI gene family, member 3 (NESH) binding protein [Ho... 34 0.44
gi|31543392 peroxisome proliferator-activated receptor gamma, co... 34 0.44
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 34 0.44
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 34 0.44
>gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens]
Length = 598
Score = 1234 bits (3194), Expect = 0.0
Identities = 598/598 (100%), Positives = 598/598 (100%)
Query: 1 MRGGGGCVLALGGQRGFQKERRRMASGNGLPSSSALVAKGPCALGPFPRYIWIHQDTPQD 60
MRGGGGCVLALGGQRGFQKERRRMASGNGLPSSSALVAKGPCALGPFPRYIWIHQDTPQD
Sbjct: 1 MRGGGGCVLALGGQRGFQKERRRMASGNGLPSSSALVAKGPCALGPFPRYIWIHQDTPQD 60
Query: 61 SLDKTCHEIWKRVQGLPEASQPWTSMEQLSVPVVGTLRGNELSFQEEALELSSGKDEISL 120
SLDKTCHEIWKRVQGLPEASQPWTSMEQLSVPVVGTLRGNELSFQEEALELSSGKDEISL
Sbjct: 61 SLDKTCHEIWKRVQGLPEASQPWTSMEQLSVPVVGTLRGNELSFQEEALELSSGKDEISL 120
Query: 121 LVEQEFLSLTKEHSILVEESSGELEVPGSSPEGTRELAPCILAPPLVAGSNERPRASIIV 180
LVEQEFLSLTKEHSILVEESSGELEVPGSSPEGTRELAPCILAPPLVAGSNERPRASIIV
Sbjct: 121 LVEQEFLSLTKEHSILVEESSGELEVPGSSPEGTRELAPCILAPPLVAGSNERPRASIIV 180
Query: 181 GDKLLKQKVAMPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLL 240
GDKLLKQKVAMPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLL
Sbjct: 181 GDKLLKQKVAMPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLL 240
Query: 241 SQFPLKSTETSKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPAR 300
SQFPLKSTETSKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPAR
Sbjct: 241 SQFPLKSTETSKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPAR 300
Query: 301 PDKLPELPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQS 360
PDKLPELPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQS
Sbjct: 301 PDKLPELPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQS 360
Query: 361 QKDACGEEGCCDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGP 420
QKDACGEEGCCDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGP
Sbjct: 361 QKDACGEEGCCDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGP 420
Query: 421 ELKFNAPVTVADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQ 480
ELKFNAPVTVADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQ
Sbjct: 421 ELKFNAPVTVADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQ 480
Query: 481 YQGLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNY 540
YQGLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNY
Sbjct: 481 YQGLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNY 540
Query: 541 PYPQRTPPKMSANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF 598
PYPQRTPPKMSANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF
Sbjct: 541 PYPQRTPPKMSANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF 598
>gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens]
Length = 408
Score = 857 bits (2214), Expect = 0.0
Identities = 408/408 (100%), Positives = 408/408 (100%)
Query: 191 MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET 250
MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET
Sbjct: 1 MPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVSKLLSQFPLKSTET 60
Query: 251 SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ 310
SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ
Sbjct: 61 SKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQ 120
Query: 311 KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC 370
KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC
Sbjct: 121 KRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGC 180
Query: 371 CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV 430
CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV
Sbjct: 181 CDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTV 240
Query: 431 ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA 490
ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA
Sbjct: 241 ADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAA 300
Query: 491 RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM 550
RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM
Sbjct: 301 RMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKM 360
Query: 551 SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF 598
SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF
Sbjct: 361 SANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMHSPYFSSSGNGINF 408
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 476 STFLQYQ---GLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSY 532
S + QYQ P QA QQ+ Q Y QQV PY Q Q + S+TP +
Sbjct: 3883 SPYTQYQYSSPALPTQAPTSYTQQSHFEQQTLYHQQVSPYQTQPTFQAVATMSFTPQVQP 3942
Query: 533 IPFVQPNYPYPQR 545
P QP+Y P +
Sbjct: 3943 TPTPQPSYQLPSQ 3955
Score = 31.2 bits (69), Expect = 2.8
Identities = 34/141 (24%), Positives = 50/141 (35%), Gaps = 11/141 (7%)
Query: 276 SGPGPKEPTGLSPFLLLPP--RPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERH 333
S GP P +P PP + PP + P PA+ + K + K +P E+
Sbjct: 956 SQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQA 1015
Query: 334 HLMEWSPGTKEPKKGQGSLFLSQWPQS-------QKDACGEEGC--CDAVGTASLTLPPK 384
++ + K+P + S L+ PQ +K E C C PP
Sbjct: 1016 PTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCPLCKTELNIGSKDPPN 1075
Query: 385 KPTCPAEKNLLYEFLGATKNP 405
TC KN + G P
Sbjct: 1076 FNTCTECKNQVCNLCGFNPTP 1096
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 476 STFLQYQ---GLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSY 532
S + QYQ P QA QQ+ Q Y QQV PY Q Q + S+TP +
Sbjct: 3883 SPYTQYQYSSPALPTQAPTSYTQQSHFEQQTLYHQQVSPYQTQPTFQAVATMSFTPQVQP 3942
Query: 533 IPFVQPNYPYPQR 545
P QP+Y P +
Sbjct: 3943 TPTPQPSYQLPSQ 3955
Score = 31.2 bits (69), Expect = 2.8
Identities = 34/141 (24%), Positives = 50/141 (35%), Gaps = 11/141 (7%)
Query: 276 SGPGPKEPTGLSPFLLLPP--RPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERH 333
S GP P +P PP + PP + P PA+ + K + K +P E+
Sbjct: 956 SQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQA 1015
Query: 334 HLMEWSPGTKEPKKGQGSLFLSQWPQS-------QKDACGEEGC--CDAVGTASLTLPPK 384
++ + K+P + S L+ PQ +K E C C PP
Sbjct: 1016 PTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPESTCPLCKTELNIGSKDPPN 1075
Query: 385 KPTCPAEKNLLYEFLGATKNP 405
TC KN + G P
Sbjct: 1076 FNTCTECKNQVCNLCGFNPTP 1096
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 37.7 bits (86), Expect = 0.030
Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 31/220 (14%)
Query: 366 GEEGCCDAVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSG---------QPRLRNKVE 416
G E V T+S +K +K+ + +T NP+ QP+
Sbjct: 877 GPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPT 936
Query: 417 VDGPELKFNAPVTVADKNNPKYTGNV-FTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNH 475
P+ + + + + P YT V F P+ + + QPL+ P P+ N
Sbjct: 937 SPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLY---PIPMTPMPVNQ 993
Query: 476 STFLQYQGLYPQQAARMPYQQAL-HPQLGC----------YSQQVMPYNPQQMGQQIFRS 524
+ + PQQ +Q A+ HP YS Q + Y+PQQ Q
Sbjct: 994 AKTYRAVPNMPQQRQDQHHQSAMMHPASAAGPPIAATPPAYSTQYVAYSPQQFPNQ---- 1049
Query: 525 SYTPLLSYIPFVQPNYPYPQRTPPKMSANPRDPPLMAGDG 564
PL+ ++P Q +P+ + +A PP A G
Sbjct: 1050 ---PLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPG 1086
Score = 32.3 bits (72), Expect = 1.3
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 19/97 (19%)
Query: 276 SGPGPKEPTGLSPFLLLPPRPPPARPDKLPE------LPAQKRQLPVFAKICSKPKADPA 329
SGP P +P PP PP+RP + P PA +P P+ P
Sbjct: 569 SGPNSLPPRAATP--TRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPK 626
Query: 330 VERHHLMEWSPGTKEPKKGQGSL-----FLSQWPQSQ 361
+RH P G+GS+ F+S P S+
Sbjct: 627 AQRH------PRNHRVSAGRGSISSGLEFVSHNPPSE 657
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 36.6 bits (83), Expect = 0.068
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 270 LQDNLFSGPGPKEPTGLSPFLL-----LPPRPPPARPDKLPELPAQKRQLPV 316
L+ + S PGP EP GL P L +P PP LPE P K + PV
Sbjct: 1513 LESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPV 1564
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 35.8 bits (81), Expect = 0.12
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 280 PKEPTGLSPFLL-LPPRPPPARPDKLPE--LPAQKRQLPVFAKICSKPKADPAVERHHLM 336
PK+P P L+ +PPPA+ ++P+ +P +K +PV K+ + P P V + +
Sbjct: 9982 PKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVPEVPKKPVP 10041
Query: 337 EWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKP---------- 386
E PKK + ++ P+ K EE V PPK P
Sbjct: 10042 EKKVPVPAPKKVEAP--PAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKVPKKREPVPVPV 10099
Query: 387 TCPAEKNLLYE 397
P E+ +L+E
Sbjct: 10100 ALPQEEEVLFE 10110
Score = 34.3 bits (77), Expect = 0.34
Identities = 72/323 (22%), Positives = 118/323 (36%), Gaps = 25/323 (7%)
Query: 123 EQEFLSLTKEHSILVEESSGELEVPGSSPEGTRELAPCILAPPLVAGSNERPRASIIVGD 182
E+E + + KE V E S E +VP PE P ++ P++ + R
Sbjct: 9146 EREVIQVQKE----VYEESHERKVPAKVPEKKAPPPPKVIKKPVIEKIEKTSRRMEEEKV 9201
Query: 183 KLLK-QKVAMPVISSRQDCDSATSTVTDI-LCAAEVKSSKGTEDRGRILGDSNLQVSKLL 240
++ K +V+ ++ + V ++ + A K +E++ + +VS +
Sbjct: 9202 QVTKVPEVSKKIVPQKPSRTPVQEEVIEVKVPAVHTKKMVISEEKMFFASHTEEEVSVTV 9261
Query: 241 SQFPLKSTETSKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEPTGLS-PFLLLPPRPPPA 299
+ + K+ +V RV L P P+E + P + PP P
Sbjct: 9262 PEVQKEIVTEEKI----HVAISKRVEPPPKVPELPEKPAPEEVAPVPIPKKVEPPAPKVP 9317
Query: 300 RPDKLPELPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQ 359
K P +P +K+ +PV K + P P V + + E KK + ++ P+
Sbjct: 9318 EVPKKP-VPEEKKPVPVPKKEPAAPPKVPEVPKKPVPEEKIPVPVAKKKEAP--PAKVPE 9374
Query: 360 SQKDACGEEGCCDAVGTASLTLPP------KKPTCPAEKNLLYEFLGATKNPSGQPRLRN 413
QK EE + T PP K P E+ + P P L
Sbjct: 9375 VQKGVVTEEKI--TIVTQREESPPPAVPEIPKKKVPEERKPVPRKEEEVPPPPKVPALPK 9432
Query: 414 KVEVDGPELKFNAPVTVADKNNP 436
K PE K PV VA K P
Sbjct: 9433 K---PVPEEKVAVPVPVAKKAPP 9452
Score = 32.3 bits (72), Expect = 1.3
Identities = 67/321 (20%), Positives = 108/321 (33%), Gaps = 64/321 (19%)
Query: 280 PKEPTGLSPFLLLPPRPPPARPDKLPELPAQ---KRQLPVFAKICSKPKADP-------- 328
PKE PP+ P P K+PE P + ++++PV KP+ P
Sbjct: 10585 PKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEKKVPVPPP--KKPEVPPTKVPEVPK 10642
Query: 329 -AVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAV------GTASLTL 381
AV + E P +P+ +F + ++ EE + V +T+
Sbjct: 10643 VAVPEKKVPEAIP--PKPESPPPEVF-----EEPEEVALEEPPAEVVEEPEPAAPPQVTV 10695
Query: 382 PPKKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTVADKNN------ 435
PPKKP P +K P P + +V PE K P+ V K
Sbjct: 10696 PPKKPV-PEKKAPAVVAKKPELPPVKVPEVPKEVV---PEKK--VPLVVPKKPEAPPAKV 10749
Query: 436 PKYTGNVFT---------PHFPTAMTSATLNQPLWLN---------LNYPPPPVFTNHST 477
P+ V P P A +P+ PPP V+
Sbjct: 10750 PEVPKEVVPEKKVAVPKKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPPPEVYEEPEE 10809
Query: 478 FLQYQGLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSYTPLLSYIPFVQ 537
+ + P++ +P + P++ +P P++ I P++
Sbjct: 10810 IAPEEEIAPEEEKPVPVAEEEEPEV---PPPAVPEEPKK----IIPEKKVPVIKKPEAPP 10862
Query: 538 PNYPYPQRTPPKMSANPRDPP 558
P P P++ K PR PP
Sbjct: 10863 PKEPEPEKVIEKPKLKPRPPP 10883
Score = 29.6 bits (65), Expect = 8.3
Identities = 65/296 (21%), Positives = 101/296 (34%), Gaps = 46/296 (15%)
Query: 278 PGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHHLME 337
P PK P +P ++P + P P K PE+P K+ PKA AV + E
Sbjct: 10521 PPPKVPE--APKEVVPEKKVPVPPPKKPEVPP--------TKVPEVPKA--AVPEKKVPE 10568
Query: 338 WSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTCPAEK--NLL 395
P E + P++ K+ E+ A PPKKP K
Sbjct: 10569 AIPPKPESPP-------PEVPEAPKEVVPEKKVPAA--------PPKKPEVTPVKVPEAP 10613
Query: 396 YEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPHFPTAMTSAT 455
E + K P P+ K EV ++ V V +K P+ P P +
Sbjct: 10614 KEVVPEKKVPVPPPK---KPEVPPTKVPEVPKVAVPEKKVPE-----AIPPKPESPPPEV 10665
Query: 456 LNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQ 515
+P + L PP V Q P + P + P + ++ P
Sbjct: 10666 FEEPEEVALEEPPAEVVEEPEPAAPPQVTVP---PKKPVPEKKAPAVVAKKPELPPVKVP 10722
Query: 516 QMGQQIFRSSYTPLL-----SYIPFVQPNYPYPQRTPPKMSANPRDPPLMAGDGPQ 566
++ +++ PL+ P P P + P K A P+ P + P+
Sbjct: 10723 EVPKEVVPEKKVPLVVPKKPEAPPAKVPEVP-KEVVPEKKVAVPKKPEVPPAKVPE 10777
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 35.4 bits (80), Expect = 0.15
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 276 SGPGPKEPTGLSP---FLLLPPRPPPARP-----DKLPELPAQKRQLPVFAKICSKPKA- 326
SGP + L+P F PPRPPP P P P LP A+ +P+A
Sbjct: 229 SGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAG 288
Query: 327 --DPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEE 368
DPA L S GT + G G + WP+ + G +
Sbjct: 289 PEDPAEAERTLDRRSDGTWGTEAGPG---WAPWPRGARRLWGSQ 329
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 35.4 bits (80), Expect = 0.15
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 276 SGPGPKEPTGLSP---FLLLPPRPPPARP-----DKLPELPAQKRQLPVFAKICSKPKA- 326
SGP + L+P F PPRPPP P P P LP A+ +P+A
Sbjct: 229 SGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAG 288
Query: 327 --DPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEE 368
DPA L S GT + G G + WP+ + G +
Sbjct: 289 PEDPAEAERTLDRRSDGTWGTEAGPG---WAPWPRGARRLWGSQ 329
>gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 35.4 bits (80), Expect = 0.15
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 276 SGPGPKEPTGLSP---FLLLPPRPPPARP-----DKLPELPAQKRQLPVFAKICSKPKA- 326
SGP + L+P F PPRPPP P P P LP A+ +P+A
Sbjct: 229 SGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAG 288
Query: 327 --DPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEE 368
DPA L S GT + G G + WP+ + G +
Sbjct: 289 PEDPAEAERTLDRRSDGTWGTEAGPG---WAPWPRGARRLWGSQ 329
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 35.4 bits (80), Expect = 0.15
Identities = 62/252 (24%), Positives = 94/252 (37%), Gaps = 44/252 (17%)
Query: 130 TKEHSILV----EESSGELEVPGSSPEGTRELAPCILAPPLVAGSNERPRASIIVGDKLL 185
T++ S LV + SG + PGS P R P PP S + ++ G +
Sbjct: 2742 TQDKSSLVGLPPSKLSGPILGPGSFPSDDRLSRP---PPPATPSSMDVNSRQLVGGSQAF 2798
Query: 186 KQKV----AMPVISSRQDC----DSATSTVTDILCAAEVKSSKGTEDRGRILGDSNLQVS 237
Q+ ++P+ +Q + +T +A S+ G E + LG
Sbjct: 2799 YQRAPYPGSLPLQQQQQQLWQQQQATAATSMRFAMSARFPSTPGPELGRQALGS------ 2852
Query: 238 KLLSQFPLKSTETSKVPDNKNVLDKTRVTKDF--LQDNLFSGPGPKEPTGLSPFLLLPPR 295
PL T ++P + F L+ N+ G GP G +PF P +
Sbjct: 2853 ------PLAGIST-RLPGPGEPVPGPAGPAQFIELRHNVQKGLGP----GGTPF---PGQ 2898
Query: 296 PPPARPDKLPE-------LPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKG 348
PP RP P P R L V KP A PA E ++ + +P TK P
Sbjct: 2899 GPPQRPRFYPVSEDPHRLAPEGLRGLAVSGLPPQKPSAPPAPELNNSLHPTPHTKGPTLP 2958
Query: 349 QGSLFLSQWPQS 360
G +++ P S
Sbjct: 2959 TGLELVNRPPSS 2970
Score = 31.2 bits (69), Expect = 2.8
Identities = 52/182 (28%), Positives = 65/182 (35%), Gaps = 17/182 (9%)
Query: 281 KEPTGLSPFLLLPPRPPPARPDKLP-ELPAQKRQLPVFAKICSKPKADPAVERHHLMEWS 339
++P GL+P L PR P A P P P P S+P A E H
Sbjct: 2174 QDPFGLAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFH---TTP 2230
Query: 340 PGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTCPAEKNL--LYE 397
PGT + FL S + E G AS L P + K L E
Sbjct: 2231 PGTPRHQPSTPDPFLKPRCPSLDNLAVPESPGVGGGKASEPLLSPPPFGESRKALEVKKE 2290
Query: 398 FLGATKNPSGQPRL------RNKVEVDGPELK----FNAPVTV-ADKNNPKYTGNVFTPH 446
LGA+ G P L + + G ELK F AP+T A + P+ G P
Sbjct: 2291 ELGASSPSYGPPNLGFVDSPSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQ 2350
Query: 447 FP 448
P
Sbjct: 2351 EP 2352
>gi|39930575 shisa homolog 4 [Homo sapiens]
Length = 197
Score = 35.4 bits (80), Expect = 0.15
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 512 YNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKMSANPRDPPLM---AGDGPQY- 567
Y +Q Q F P+ IP VQP YPYPQ PK P P M +G PQY
Sbjct: 115 YRRRQQLQSPFEGQEIPMTG-IP-VQPVYPYPQ--DPKAGPAPPQPGFMYPPSGPAPQYP 170
Query: 568 LFPQG 572
L+P G
Sbjct: 171 LYPAG 175
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 35.0 bits (79), Expect = 0.20
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 486 PQQAARMPYQQALHPQLGCYSQQVMP--YNPQQMGQQIFRSSYTPLLSYIPFV------- 536
P QA PY +P Y Q MP YNP GQ + Y P+ P
Sbjct: 800 PPQAQGPPYPT--YPGYPGYCQMPMPMGYNPYAYGQ--YNMPYPPVYHQSPGQAPYPGPQ 855
Query: 537 QPNYPYPQRTPPKMSANPR 555
QP+YP+PQ PP+ S P+
Sbjct: 856 QPSYPFPQ--PPQQSYYPQ 872
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 35.0 bits (79), Expect = 0.20
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 486 PQQAARMPYQQALHPQLGCYSQQVMP--YNPQQMGQQIFRSSYTPLLSYIPFV------- 536
P QA PY +P Y Q MP YNP GQ + Y P+ P
Sbjct: 795 PPQAQGPPYPT--YPGYPGYCQMPMPMGYNPYAYGQ--YNMPYPPVYHQSPGQAPYPGPQ 850
Query: 537 QPNYPYPQRTPPKMSANPR 555
QP+YP+PQ PP+ S P+
Sbjct: 851 QPSYPFPQ--PPQQSYYPQ 867
>gi|55749678 ninein-like [Homo sapiens]
Length = 1382
Score = 35.0 bits (79), Expect = 0.20
Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 20/124 (16%)
Query: 102 LSFQEEALELSSGKDEISLLVEQEFLSLTKEHSILVEESSGELEVPGSSPEGTRELAPCI 161
L+ +EE LEL+ GK +E E +L K+ V GS EGTR L
Sbjct: 802 LALEEEELELARGKRVDGPSLEAEMQALPKDGL-----------VAGSGQEGTRGLL--- 847
Query: 162 LAPPLVAGSNERPRASIIVGDKLLKQKVAMPVISSRQDCDSATSTVTDILCAAEVKSSKG 221
PL G ERP A + GD ++ A RQ D + T A +S G
Sbjct: 848 ---PLRPGCGERPLAWLAPGDGRESEEAAGAGPRRRQAQD---TEATQSPAPAPAPASHG 901
Query: 222 TEDR 225
+R
Sbjct: 902 PSER 905
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 35.0 bits (79), Expect = 0.20
Identities = 70/285 (24%), Positives = 103/285 (36%), Gaps = 59/285 (20%)
Query: 279 GPKEPTGLS-----PFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERH 333
GP++P P + PP PP A+P P+LP Q++Q K K V+
Sbjct: 3191 GPQQPPQQQQQQQQPQVQQPPPPPAAQPPPTPQLPLQQQQQ-------RKDKDSEKVKEK 3243
Query: 334 HLMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTC-PAEK 392
++ KG+G P +K+ GE A T S LP + PA+
Sbjct: 3244 ---------EKAHKGKGEPL----PVPKKEK-GEAPTATAA-TISAPLPTMEYAVDPAQL 3288
Query: 393 NLLYEFLGATKNPSGQPRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPHFPTAMT 452
L L T +P+ + L + P +P Y P P A+
Sbjct: 3289 QALQAAL--TSDPTAL--------LTSQFLPYFVPGF-----SPYYA-----PQIPGALQ 3328
Query: 453 SATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQQAARMPYQQALHPQLGCYSQ-QVMP 511
S L + +P P + L L Q YQQ+L + Q Q+
Sbjct: 3329 SGYLQPMYGMEGLFPYSPALSQALMGLSPGSLLQQY---QQYQQSLQEAIQQQQQRQLQQ 3385
Query: 512 YNPQQMGQQIFRSSYTPLLSYIPFVQPNYPYPQRTPPKMSANPRD 556
Q++ QQ ++S TP V P P P + P K S P +
Sbjct: 3386 QQQQKVQQQQPKASQTP-------VPPGAPSPDKDPAKESPKPEE 3423
>gi|139394604 bromo adjacent homology domain containing 1 [Homo
sapiens]
Length = 780
Score = 35.0 bits (79), Expect = 0.20
Identities = 83/351 (23%), Positives = 115/351 (32%), Gaps = 78/351 (22%)
Query: 279 GPK---EPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSK------------ 323
GP+ E L P L PP P P+ D P ++R + A+ +
Sbjct: 82 GPRSADEADELPPDLPKPPSPAPSSEDPGLAQPRKRRLASLNAEALNNLLLEREDTSSLA 141
Query: 324 -PKADPAVERHHLME-------WSPGTKEPKKGQ---GSLFLSQWPQSQKDACGEEGCCD 372
+ A + H + WS K P+ G GS LS P +EG
Sbjct: 142 GTRRSRAGDPHRSRDRDRATGGWSSSKKRPRLGDLGGGSRDLSPEPAP------DEG--- 192
Query: 373 AVGTASLTLPPKKPTCPAEKNLLYEFLGATKNPSGQPRL-----RNKVEVDGPELKFNAP 427
P++ PA K L A S + L R EVDG + AP
Sbjct: 193 ----------PRRDGDPAPKRLASLNAAAFLKLSQERELPLRLPRAHAEVDGRSTEPPAP 242
Query: 428 VTVADKNNPKYTGNVFTPHFPTAMTSATLNQPLWLNLNYPPPPVFTNHSTFLQYQGLYPQ 487
K PK G + + A + P W P P T +Q
Sbjct: 243 KAPRPKW-PKVNGKNYPKAWQGASSGEAAGPPGWQGCPDEPWPSATPCGPSVQ------- 294
Query: 488 QAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIF------RSSYTPLLSYIPFVQPNYP 541
+ P +AL LG + P+ P MG Q R QP++P
Sbjct: 295 -PSHQPLSKALESPLG-----LRPHLPLLMGGQAALKPEPGRPGEESPAPKQELHQPSFP 348
Query: 542 YPQRTPPKMSANPRD------PPLMAGDGPQYLF--PQGYGFGSTSGGPLM 584
PQ +P M NP D P + G YL+ +G G S P++
Sbjct: 349 TPQLSPLPMPGNPADYNGLCVGPELTALGSFYLYCGQEGLQCGGYSPCPML 399
>gi|13259529 survival of motor neuron 2, centromeric isoform b [Homo
sapiens]
Length = 262
Score = 34.7 bits (78), Expect = 0.26
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 231 DSNLQVSKLLSQFPLKSTETSKVPDNK--NVLDKTRVTKDFLQDNLFSGPGPKEPTGLSP 288
+ N Q ++ SQ +E S+ P NK N+ K+ FL P P L P
Sbjct: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPP-----PPPMPGPRLGP 207
Query: 289 FLLLPPRPPPARPDKLPELPA 309
++PP PPP PD L + A
Sbjct: 208 GKIIPP-PPPICPDSLDDADA 227
>gi|13259531 survival of motor neuron 2, centromeric isoform c [Homo
sapiens]
Length = 250
Score = 34.7 bits (78), Expect = 0.26
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 231 DSNLQVSKLLSQFPLKSTETSKVPDNK--NVLDKTRVTKDFLQDNLFSGPGPKEPTGLSP 288
+ N Q ++ SQ +E S+ P NK N+ K+ FL P P L P
Sbjct: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPP-----PPPMPGPRLGP 207
Query: 289 FLLLPPRPPPARPDKLPELPA 309
++PP PPP PD L + A
Sbjct: 208 GKIIPP-PPPICPDSLDDADA 227
>gi|13259512 survival of motor neuron 1, telomeric isoform b [Homo
sapiens]
Length = 262
Score = 34.7 bits (78), Expect = 0.26
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 231 DSNLQVSKLLSQFPLKSTETSKVPDNK--NVLDKTRVTKDFLQDNLFSGPGPKEPTGLSP 288
+ N Q ++ SQ +E S+ P NK N+ K+ FL P P L P
Sbjct: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPP-----PPPMPGPRLGP 207
Query: 289 FLLLPPRPPPARPDKLPELPA 309
++PP PPP PD L + A
Sbjct: 208 GKIIPP-PPPICPDSLDDADA 227
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 34.7 bits (78), Expect = 0.26
Identities = 84/348 (24%), Positives = 108/348 (31%), Gaps = 49/348 (14%)
Query: 136 LVEESSGELEVPGSSPEGTRELAPCILAP--PLVAGSNERPRASIIVGDK----LLKQKV 189
LV +S V S LA +LAP P S P A G K +
Sbjct: 700 LVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSA 759
Query: 190 AMPVISSRQDCDSATSTVTDILCAAEVKSSKGTEDRGRILGDS----NLQVSKLLSQFPL 245
PV SS ++C + S A+ SSKGT L DS + VS + P
Sbjct: 760 LAPVASSPKECPTEDSG------ASATASSKGTLT---YLADSPSPLGVSVSPQTKRPPT 810
Query: 246 KSTETSKVPDNKNVLDKTR-VTKDFLQDNLFSGPGPKEPTGLSPFLLLPPRPPPARPDKL 304
K N+ V FL +N S G K+ SP P PP P
Sbjct: 811 KKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKD----SPATTHSPTPPS--PKGA 864
Query: 305 PELPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQWPQSQKDA 364
P A P + K P+V + P T PK+ S P+ +
Sbjct: 865 PTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARAT 924
Query: 365 CGEEGCCDAVGTASLTLPPK-----------------KPTCPAEKNLLYEFLGATKNPSG 407
+G + PP PT PA + AT +P G
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984
Query: 408 QPRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPHFPTAMTSAT 455
P P P T + K P T TP P +AT
Sbjct: 985 AP----TPPAATPPSPKGGPATPSPKGAP--TPPAVTPPSPKGSPAAT 1026
>gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens]
Length = 875
Score = 34.3 bits (77), Expect = 0.34
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 20/69 (28%)
Query: 534 PFVQPNYPYPQRTPPKMS--ANPRDPPLMAGDGPQYLFPQGYGFGS------TSGGPLMH 585
P + P PYP +TP + PR P L GYG G+ T G P H
Sbjct: 778 PGLTPGLPYPHQTPQGLMPYGQPRPPIL------------GYGAGAVRPAVPTGGPPYPH 825
Query: 586 SPYFSSSGN 594
+PY + GN
Sbjct: 826 APYGAGRGN 834
>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
Length = 876
Score = 34.3 bits (77), Expect = 0.34
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 20/69 (28%)
Query: 534 PFVQPNYPYPQRTPPKMS--ANPRDPPLMAGDGPQYLFPQGYGFGS------TSGGPLMH 585
P + P PYP +TP + PR P L GYG G+ T G P H
Sbjct: 779 PGLTPGLPYPHQTPQGLMPYGQPRPPIL------------GYGAGAVRPAVPTGGPPYPH 826
Query: 586 SPYFSSSGN 594
+PY + GN
Sbjct: 827 APYGAGRGN 835
>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
Length = 669
Score = 34.3 bits (77), Expect = 0.34
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 249 ETSKVPDNKNVLDKTRVTKDFLQDNLFSGPGPKEP----TGLSPFLLLPPRP-----PPA 299
E + +P + L+ + ++K F Q L + P P++P G +P P P P
Sbjct: 111 EVTDLPKKPSKLELSDLSKKFPQ--LGATPFPRKPLQPEVGEAPLKASLPEPGAPARKPL 168
Query: 300 RPDKL--PELPAQKRQLPVFAKICSKPKADPAVERHHLMEWSPGTKEPKKGQGSLFLSQW 357
+PD+L P P + + F + +P+A A R E S K+P + + +++ +
Sbjct: 169 QPDELSHPARPPSEPKSGAFPRKLWQPEAGEATPRSPQPELSTFPKKPAQPEFNVYPKKP 228
Query: 358 PQSQ 361
PQ Q
Sbjct: 229 PQPQ 232
Score = 33.5 bits (75), Expect = 0.57
Identities = 35/133 (26%), Positives = 48/133 (36%), Gaps = 19/133 (14%)
Query: 278 PGPKEPTGLSPFLLLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHHLME 337
P P E T L P +PPP LP+ P ++ PK P E L
Sbjct: 71 PPPPEVTDL------PKKPPPPEVTDLPKKPPP-------PEVTDLPKKPPPPEVTDL-- 115
Query: 338 WSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPPKKPTCPAEKNLLYE 397
K+P K + S ++PQ + VG A L +P PA K L +
Sbjct: 116 ----PKKPSKLELSDLSKKFPQLGATPFPRKPLQPEVGEAPLKASLPEPGAPARKPLQPD 171
Query: 398 FLGATKNPSGQPR 410
L P +P+
Sbjct: 172 ELSHPARPPSEPK 184
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 34.3 bits (77), Expect = 0.34
Identities = 36/124 (29%), Positives = 45/124 (36%), Gaps = 18/124 (14%)
Query: 276 SGPGPKEPTGLSPFL-LLPPRPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHH 334
S P P P SP L PP PPP P LP P P A+ + P V
Sbjct: 412 SPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPP------PPPAQEEQEESPPPVV---- 461
Query: 335 LMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTL--PPKKPTCPAEK 392
P T K+G+ L SQ + + G EG T S PP+ A K
Sbjct: 462 -----PATCSRKRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPTVAPK 516
Query: 393 NLLY 396
+ +
Sbjct: 517 STTF 520
>gi|15721939 metastatic lymph node 51 [Homo sapiens]
Length = 703
Score = 34.3 bits (77), Expect = 0.34
Identities = 32/122 (26%), Positives = 43/122 (35%), Gaps = 21/122 (17%)
Query: 467 PPPPVFTNHSTFLQYQGLYPQQAARMPYQQALHPQLGCYSQQVMPYNPQQMGQQIFRSSY 526
PP + L + GL+P Q A P G Y V Q QQ+ +Y
Sbjct: 568 PPQGMLVQPGMNLPHPGLHPHQTP------APLPNPGLYPPPVSMSPGQPPPQQLLAPTY 621
Query: 527 TPLLSYIPFVQPNYPY-PQRTPPKMSANPRDPPLMAGDGPQYLFPQGYGFGSTSGGPLMH 585
+ F P+YPY P PP PP P +L+P GG +
Sbjct: 622 FSAPGVMNFGNPSYPYAPGALPP--------PP------PPHLYPNTQAPSQVYGGVTYY 667
Query: 586 SP 587
+P
Sbjct: 668 NP 669
>gi|33667044 ABI gene family, member 3 (NESH) binding protein [Homo
sapiens]
Length = 1075
Score = 33.9 bits (76), Expect = 0.44
Identities = 48/216 (22%), Positives = 81/216 (37%), Gaps = 42/216 (19%)
Query: 340 PGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLTLPP---------------- 383
PGT+ P + P + G+ G + + +T PP
Sbjct: 702 PGTRRPPLPPRPTHPRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPRPTGTPLERIE 761
Query: 384 ---KKPTCPAEKNLLYEFLGATKNPSGQPRLRNKVEVDGPELKF-----NAPVTVAD--K 433
K+PT PA L + +P+ + K GP +++ N+P ++ D K
Sbjct: 762 TDIKQPTVPASGEELENITDFSSSPTRETDPLGKPRFKGPHVRYIQKPDNSPCSITDSVK 821
Query: 434 NNPK---YTGNVFTP--HFPTAMTSATLNQ-PLWLNLNYPPP--PVFTNHSTFLQYQGLY 485
PK GN +P + PT +T T+ P ++ L++ P T + + G +
Sbjct: 822 RFPKEEATEGNATSPPQNPPTNLTVVTVEGCPSFVILDWEKPLNDTVTEYEVISRENGSF 881
Query: 486 --PQQAARMPYQ-----QALHPQLGCYSQQVMPYNP 514
++ +M Q + L P Y QV P NP
Sbjct: 882 SGKNKSIQMTNQTFSTVENLKPNTS-YEFQVKPKNP 916
>gi|31543392 peroxisome proliferator-activated receptor gamma,
coactivator 1 beta [Homo sapiens]
Length = 1023
Score = 33.9 bits (76), Expect = 0.44
Identities = 51/211 (24%), Positives = 78/211 (36%), Gaps = 40/211 (18%)
Query: 366 GEEGCCDAVGTASLTLPP----KKPTCPA----EKNLLYEFLGATKNPSGQPRLRNKVEV 417
G+ C + A + PP +KP+ PA E +LL + L AT P+ + +
Sbjct: 119 GDALSCTSASPAPSSAPPSPAPEKPSAPAPEVDELSLLQKLLLATSYPTSSSDTQKEGTA 178
Query: 418 ---DGPELKFNAPVTVADKNNPKYTGNVFTPHFPTAMTSAT-LNQPLWLNLNYPPPPVFT 473
G K P AD K P + S T L++ L T
Sbjct: 179 WRQAGLRSKSQRPCVKADSTQDKKA-----PMMQSQSRSCTELHKHL------------T 221
Query: 474 NHSTFLQYQGLYPQ--QAARMPYQQALHPQLGCYSQQVMPYNPQQM--------GQQIFR 523
+ LQ +GL P Q+ R+P ++ P C S Q P +PQ G + +
Sbjct: 222 SAQCCLQDRGLQPPCLQSPRLPAKEDKEPGEDCPSPQPAPASPQDSLALGRADPGAPVSQ 281
Query: 524 SSYTPLLSYIPFVQPNYPYPQRTPPKMSANP 554
++ I ++ Y PQR P + P
Sbjct: 282 EDMQAMVQLIRYMH-TYCLPQRKLPPQTPEP 311
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 33.9 bits (76), Expect = 0.44
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 9/110 (8%)
Query: 277 GPGPKEPTGLSPFLLLPP--RPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHH 334
G P P G+ P PP +PPP LP Q++Q P P ++
Sbjct: 468 GMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPP------PPPPPSSSMASST 521
Query: 335 LMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLT-LPP 383
+ W T G+ + W Q Q A G G ++ LPP
Sbjct: 522 PLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPP 571
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 33.9 bits (76), Expect = 0.44
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 9/110 (8%)
Query: 277 GPGPKEPTGLSPFLLLPP--RPPPARPDKLPELPAQKRQLPVFAKICSKPKADPAVERHH 334
G P P G+ P PP +PPP LP Q++Q P P ++
Sbjct: 468 GMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPP------PPPPPSSSMASST 521
Query: 335 LMEWSPGTKEPKKGQGSLFLSQWPQSQKDACGEEGCCDAVGTASLT-LPP 383
+ W T G+ + W Q Q A G G ++ LPP
Sbjct: 522 PLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPP 571
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,800,835
Number of Sequences: 37866
Number of extensions: 1633657
Number of successful extensions: 6495
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 6079
Number of HSP's gapped (non-prelim): 487
length of query: 598
length of database: 18,247,518
effective HSP length: 108
effective length of query: 490
effective length of database: 14,157,990
effective search space: 6937415100
effective search space used: 6937415100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.