Guide to the Human Genome
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Search of human proteins with 19743850

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19743850 decorin isoform c precursor [Homo sapiens]
         (212 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19743850 decorin isoform c precursor [Homo sapiens]                437   e-123
gi|19743848 decorin isoform b precursor [Homo sapiens]                418   e-117
gi|19743846 decorin isoform a preproprotein [Homo sapiens]            291   3e-79
gi|4503271 decorin isoform a preproprotein [Homo sapiens]             291   3e-79
gi|19743852 decorin isoform d precursor [Homo sapiens]                261   2e-70
gi|41350214 asporin [Homo sapiens]                                    176   2e-44
gi|4502403 biglycan preproprotein [Homo sapiens]                      175   2e-44
gi|19743854 decorin isoform e precursor [Homo sapiens]                155   3e-38
gi|188528675 slit homolog 1 [Homo sapiens]                             74   9e-14
gi|11321571 slit homolog 3 [Homo sapiens]                              74   1e-13
gi|4759146 slit homolog 2 [Homo sapiens]                               68   5e-12
gi|76880480 hypothetical protein LOC9865 [Homo sapiens]                60   1e-09
gi|229089140 leucine rich repeat containing 24 [Homo sapiens]          60   2e-09
gi|71040111 fibromodulin precursor [Homo sapiens]                      60   2e-09
gi|219521831 adhesion molecule with Ig-like domain 2 [Homo sapiens]    59   3e-09
gi|32469517 adhesion molecule with Ig-like domain 2 [Homo sapiens]     59   3e-09
gi|42544233 leucine rich repeat neuronal 2 [Homo sapiens]              57   9e-09
gi|42544231 leucine rich repeat neuronal 2 [Homo sapiens]              57   9e-09
gi|4557543 extracellular matrix protein 2 precursor [Homo sapiens]     57   1e-08
gi|13375646 leucine rich repeat and fibronectin type III domain ...    57   2e-08
gi|157426829 leucine rich repeat and Ig domain containing 3 [Hom...    56   3e-08
gi|38202222 fibronectin leucine rich transmembrane protein 3 pre...    56   3e-08
gi|7019383 fibronectin leucine rich transmembrane protein 3 prec...    56   3e-08
gi|4758460 glycoprotein V (platelet) [Homo sapiens]                    55   3e-08
gi|153791507 leucine rich repeat neuronal 3 [Homo sapiens]             55   3e-08
gi|153792651 leucine rich repeat neuronal 3 [Homo sapiens]             55   3e-08
gi|153792227 leucine rich repeat neuronal 3 [Homo sapiens]             55   3e-08
gi|149773484 leucine rich repeat and fibronectin type III domain...    55   4e-08
gi|31542244 leucine rich repeat and fibronectin type III domain ...    55   4e-08
gi|62912472 leucine-rich repeat-containing G protein-coupled rec...    55   6e-08

>gi|19743850 decorin isoform c precursor [Homo sapiens]
          Length = 212

 Score =  437 bits (1123), Expect = e-123
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60
           MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
Sbjct: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60

Query: 61  HLRVVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 120
           HLRVVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN
Sbjct: 61  HLRVVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 120

Query: 121 TPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGV 180
           TPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGV
Sbjct: 121 TPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGV 180

Query: 181 SLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK 212
           SLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
Sbjct: 181 SLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK 212


>gi|19743848 decorin isoform b precursor [Homo sapiens]
          Length = 250

 Score =  418 bits (1074), Expect = e-117
 Identities = 212/250 (84%), Positives = 212/250 (84%), Gaps = 38/250 (15%)

Query: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60
           MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
Sbjct: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60

Query: 61  HLRVVQCSDL--------------------------------------GLPPSLTELHLD 82
           HLRVVQCSDL                                      GLPPSLTELHLD
Sbjct: 61  HLRVVQCSDLELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITSIPQGLPPSLTELHLD 120

Query: 83  GNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLA 142
           GNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLA
Sbjct: 121 GNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLA 180

Query: 143 EHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYV 202
           EHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYV
Sbjct: 181 EHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYV 240

Query: 203 RSAIQLGNYK 212
           RSAIQLGNYK
Sbjct: 241 RSAIQLGNYK 250


>gi|19743846 decorin isoform a preproprotein [Homo sapiens]
          Length = 359

 Score =  291 bits (745), Expect = 3e-79
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 71  GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLD 130
           GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLD
Sbjct: 218 GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLD 277

Query: 131 NNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYW 190
           NNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYW
Sbjct: 278 NNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYW 337

Query: 191 EIQPSTFRCVYVRSAIQLGNYK 212
           EIQPSTFRCVYVRSAIQLGNYK
Sbjct: 338 EIQPSTFRCVYVRSAIQLGNYK 359



 Score =  191 bits (486), Expect = 3e-49
 Identities = 112/223 (50%), Positives = 136/223 (60%), Gaps = 27/223 (12%)

Query: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60
           MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
Sbjct: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60

Query: 61  HLRVVQCSDLG-------LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAV 113
           HLRVVQCSDLG       LPP  T L L  NKI+ +     K L NL  L L  N IS V
Sbjct: 61  HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKISKV 120

Query: 114 DNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTK 173
             G+      L  L+L  N+L  +P  +   K +Q +  H N I+ V            +
Sbjct: 121 SPGAFTPLVKLERLYLSKNQLKELPEKMP--KTLQELRAHENEITKV------------R 166

Query: 174 KASYSG------VSLFSNPVQYWEIQPSTFRCVYVRSAIQLGN 210
           K +++G      + L +NP++   I+   F+ +   S I++ +
Sbjct: 167 KVTFNGLNQMIVIELGTNPLKSSGIENGAFQGMKKLSYIRIAD 209



 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 72  LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSI--SAVDNGSLANTPHLRELHL 129
           +P +L EL    N+I++V   +  GLN +  + L  N +  S ++NG+      L  + +
Sbjct: 148 MPKTLQELRAHENEITKVRKVTFNGLNQMIVIELGTNPLKSSGIENGAFQGMKKLSYIRI 207

Query: 130 DNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSS 163
            +  +T +P GL     +  ++L  N IS V ++
Sbjct: 208 ADTNITSIPQGLPPS--LTELHLDGNKISRVDAA 239


>gi|4503271 decorin isoform a preproprotein [Homo sapiens]
          Length = 359

 Score =  291 bits (745), Expect = 3e-79
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 71  GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLD 130
           GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLD
Sbjct: 218 GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLD 277

Query: 131 NNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYW 190
           NNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYW
Sbjct: 278 NNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYW 337

Query: 191 EIQPSTFRCVYVRSAIQLGNYK 212
           EIQPSTFRCVYVRSAIQLGNYK
Sbjct: 338 EIQPSTFRCVYVRSAIQLGNYK 359



 Score =  191 bits (486), Expect = 3e-49
 Identities = 112/223 (50%), Positives = 136/223 (60%), Gaps = 27/223 (12%)

Query: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60
           MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
Sbjct: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60

Query: 61  HLRVVQCSDLG-------LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAV 113
           HLRVVQCSDLG       LPP  T L L  NKI+ +     K L NL  L L  N IS V
Sbjct: 61  HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHALILVNNKISKV 120

Query: 114 DNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTK 173
             G+      L  L+L  N+L  +P  +   K +Q +  H N I+ V            +
Sbjct: 121 SPGAFTPLVKLERLYLSKNQLKELPEKMP--KTLQELRAHENEITKV------------R 166

Query: 174 KASYSG------VSLFSNPVQYWEIQPSTFRCVYVRSAIQLGN 210
           K +++G      + L +NP++   I+   F+ +   S I++ +
Sbjct: 167 KVTFNGLNQMIVIELGTNPLKSSGIENGAFQGMKKLSYIRIAD 209



 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 72  LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSI--SAVDNGSLANTPHLRELHL 129
           +P +L EL    N+I++V   +  GLN +  + L  N +  S ++NG+      L  + +
Sbjct: 148 MPKTLQELRAHENEITKVRKVTFNGLNQMIVIELGTNPLKSSGIENGAFQGMKKLSYIRI 207

Query: 130 DNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSS 163
            +  +T +P GL     +  ++L  N IS V ++
Sbjct: 208 ADTNITSIPQGLPPS--LTELHLDGNKISRVDAA 239


>gi|19743852 decorin isoform d precursor [Homo sapiens]
          Length = 172

 Score =  261 bits (668), Expect = 2e-70
 Identities = 141/219 (64%), Positives = 145/219 (66%), Gaps = 54/219 (24%)

Query: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60
           MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
Sbjct: 1   MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60

Query: 61  HLRVVQCSDLG-------LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAV 113
           HLRVVQCSDLG       LPP  T L L  NKI+ +     K L NL  + L  N+IS V
Sbjct: 61  HLRVVQCSDLGLDKVPKDLPPDTTLLDLQNNKITEIKDGDFKNLKNLHVVYLHNNNISVV 120

Query: 114 DNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTK 173
                                                          GSSDFCPPGHNTK
Sbjct: 121 -----------------------------------------------GSSDFCPPGHNTK 133

Query: 174 KASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK 212
           KASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK
Sbjct: 134 KASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNYK 172


>gi|41350214 asporin [Homo sapiens]
          Length = 380

 Score =  176 bits (445), Expect = 2e-44
 Identities = 81/155 (52%), Positives = 112/155 (72%), Gaps = 4/155 (2%)

Query: 61  HLRVVQCS----DLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNG 116
           H+R+ +        GLPP+L ELHLD NKIS V+    K    L +LGL  N I+ ++NG
Sbjct: 224 HIRIAEAKLTSVPKGLPPTLLELHLDYNKISTVELEDFKRYKELQRLGLGNNKITDIENG 283

Query: 117 SLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKAS 176
           SLAN P +RE+HL+NNKL ++P GL E KY+Q+++LH+N+I+ VG +DFCP     KK+ 
Sbjct: 284 SLANIPRVREIHLENNKLKKIPSGLPELKYLQIIFLHSNSIARVGVNDFCPTVPKMKKSL 343

Query: 177 YSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQLGNY 211
           YS +SLF+NPV+YWE+QP+TFRCV  R ++QLGN+
Sbjct: 344 YSAISLFNNPVKYWEMQPATFRCVLSRMSVQLGNF 378



 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 70/231 (30%), Positives = 99/231 (42%), Gaps = 38/231 (16%)

Query: 1   MKATIILLLLAQVSWAGPF---QQRGLFDFMLEDEASGIGPEVPDDRD------------ 45
           MK  ++LL LA  S A PF       L + ML+D       +  DD D            
Sbjct: 1   MKEYVLLLFLALCS-AKPFFSPSHIALKNMMLKDMEDTDDDDDDDDDDDDDDEDNSLFPT 59

Query: 46  -------FEPSLGPVCPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDA 91
                  F   L P+CPF CQC+ RVV CSDLGL       P     L L  NKI  +  
Sbjct: 60  REPRSHFFPFDLFPMCPFGCQCYSRVVHCSDLGLTSVPTNIPFDTRMLDLQNNKIKEIKE 119

Query: 92  ASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVY 151
              KGL +L  L L+ N ++ +   +   T  LR L+L +N+L+ +P  L   K +  + 
Sbjct: 120 NDFKGLTSLYGLILNNNKLTKIHPKAFLTTKKLRRLYLSHNQLSEIPLNLP--KSLAELR 177

Query: 152 LHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYV 202
           +H N +  +    F   G N        + + +NP+    I+P  F  V V
Sbjct: 178 IHENKVKKIQKDTF--KGMNALHV----LEMSANPLDNNGIEPGAFEGVTV 222


>gi|4502403 biglycan preproprotein [Homo sapiens]
          Length = 368

 Score =  175 bits (444), Expect = 2e-44
 Identities = 84/141 (59%), Positives = 103/141 (73%)

Query: 72  LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDN 131
           LP +L ELHLD NKI  ++   L   + L +LGL  N I  ++NGSL+  P LRELHLDN
Sbjct: 227 LPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDN 286

Query: 132 NKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWE 191
           NKL RVP GL + K +QVVYLH+NNI+ VG +DFCP G   K+A Y+G+SLF+NPV YWE
Sbjct: 287 NKLARVPSGLPDLKLLQVVYLHSNNITKVGVNDFCPMGFGVKRAYYNGISLFNNPVPYWE 346

Query: 192 IQPSTFRCVYVRSAIQLGNYK 212
           +QP+TFRCV  R AIQ GNYK
Sbjct: 347 VQPATFRCVTDRLAIQFGNYK 367



 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 69/207 (33%), Positives = 98/207 (47%), Gaps = 24/207 (11%)

Query: 7   LLLLAQVSWAGPFQQRGLFDFMLED--------EASGIGPE-VPDDRDFEPSLGPVCPFR 57
           L+ L  +S A PF+QRG +DF L+D        EASG     V D     P+   +CPF 
Sbjct: 7   LVSLLALSQALPFEQRGFWDFTLDDGPFMMNDEEASGADTSGVLDPDSVTPTYSAMCPFG 66

Query: 58  CQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSI 110
           C CHLRVVQCSDLGL        P  T L L  N IS +     KGL +L  L L  N I
Sbjct: 67  CHCHLRVVQCSDLGLKSVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKI 126

Query: 111 SAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGH 170
           S +   + +    L++L++  N L  +P  L     +  + +H+N I  V      P G 
Sbjct: 127 SKIHEKAFSPLRKLQKLYISKNHLVEIPPNLPSS--LVELRIHDNRIRKV------PKGV 178

Query: 171 NTKKASYSGVSLFSNPVQYWEIQPSTF 197
            +   + + + +  NP++    +P  F
Sbjct: 179 FSGLRNMNCIEMGGNPLENSGFEPGAF 205


>gi|19743854 decorin isoform e precursor [Homo sapiens]
          Length = 75

 Score =  155 bits (391), Expect = 3e-38
 Identities = 73/75 (97%), Positives = 73/75 (97%)

Query: 1  MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60
          MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC
Sbjct: 1  MKATIILLLLAQVSWAGPFQQRGLFDFMLEDEASGIGPEVPDDRDFEPSLGPVCPFRCQC 60

Query: 61 HLRVVQCSDLGLPPS 75
          HLRVVQCSDLG  PS
Sbjct: 61 HLRVVQCSDLGCLPS 75


>gi|188528675 slit homolog 1 [Homo sapiens]
          Length = 1534

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 17/165 (10%)

Query: 53  VCPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAASL-KGLNNLAKLG 104
           VCP +C+C   VV+CS L L       P S  EL L+ N+IS ++A  + K L +L K+ 
Sbjct: 512 VCPHKCRCEANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKIN 571

Query: 105 LSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEH-KYIQVVYLHNNNISVVGSS 163
           LS N +S +++G+      + ELHL  N+L  +  G+      ++ + L NN IS + + 
Sbjct: 572 LSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHND 631

Query: 164 DFCPPGHNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRSAIQL 208
            F      T   +   +SL+ N  Q   + P  F  +   S + L
Sbjct: 632 SF------TGLRNVRLLSLYDN--QITTVSPGAFDTLQSLSTLNL 668



 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 7/92 (7%)

Query: 54  CPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAASLKGLNNLAKLGLS 106
           CP  C C    V C   GL       P +   L L+GN I+R+      GL  L  L L 
Sbjct: 34  CPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLM 93

Query: 107 FNSISAVDNGSLANTPHLRELHLDNNKLTRVP 138
            N I AV+ G+  +   L  L L+ N+L  +P
Sbjct: 94  ENQIGAVERGAFDDMKELERLRLNRNQLHMLP 125



 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 14/143 (9%)

Query: 54  CPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAASLKGLNNLAKLGLS 106
           CP  C C   +V C   GL       P ++TE+ L+ N I  +   +      L ++ LS
Sbjct: 282 CPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLS 341

Query: 107 FNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKY-IQVVYLHNNNISVVGSSDF 165
            N I+ +   +      L  L L  NK+T +P G+    Y +Q++ L+ N I+ +    F
Sbjct: 342 NNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAF 401

Query: 166 CPPGHNTKKASYSGVSLFSNPVQ 188
                     + S +SL+ N +Q
Sbjct: 402 ------QDLQNLSLLSLYDNKIQ 418



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 30/120 (25%)

Query: 52  PVCPFRCQCHLRVVQCSDL-------GLPPSLTELHLDGN-------------------- 84
           P CP  C C   VV+CS+        G+P ++TEL+LDGN                    
Sbjct: 732 PQCPQECACLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDL 791

Query: 85  ---KISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGL 141
              KIS +  +S   ++ L  L LS+N++  +   +      LR L L  N ++ +  G+
Sbjct: 792 SNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGI 851



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 21/43 (48%), Positives = 30/43 (69%)

Query: 123 HLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDF 165
           ++ EL+LD N+ T VPG L+  KY+Q+V L NN IS + +S F
Sbjct: 762 NVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKISSLSNSSF 804



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 20/59 (33%), Positives = 31/59 (52%)

Query: 76  LTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           L  L LD N+IS ++  + + L  L  L L+ N+I+ +   S  + P LR   L +N L
Sbjct: 159 LKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHL 217



 Score = 31.6 bits (70), Expect = 0.52
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNN 132
           +L  L L+ NKI+ +   + + L NL+ L L  N I ++  G+  +   ++ LHL  N
Sbjct: 382 TLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439


>gi|11321571 slit homolog 3 [Homo sapiens]
          Length = 1523

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 21/149 (14%)

Query: 50  LGPVCPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAASLKGLNNLAK 102
           L P CP +C C   VV+CS+ GL       P  +TEL+L+GN ++ V    L  L +L  
Sbjct: 721 LSPRCPEQCTCMETVVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPR-ELSALRHLTL 779

Query: 103 LGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVP----GGLAEHKYIQVVYLHNNNIS 158
           + LS NSIS + N + +N  HL  L L  N+L  +P     GL   + ++V+ LH N+IS
Sbjct: 780 IDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGL---RSLRVLTLHGNDIS 836

Query: 159 VVGSSDFCPPGHNTKKASYSGVSLFSNPV 187
            V      P G      S S ++L +NP+
Sbjct: 837 SV------PEGSFNDLTSLSHLALGTNPL 859



 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 27/161 (16%)

Query: 53  VCPFRCQCHLRVVQCSD-------LGLPPSLTELHLDGNKISRVDAASL-KGLNNLAKLG 104
           VCP +C+C   +V CS+         LP  +T+L L+ N++S ++A  + K L NL K+ 
Sbjct: 504 VCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKIN 563

Query: 105 LSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEH-KYIQVVYLHNNNISVVGSS 163
           LS N I  V  G+      ++EL L  N+L  V G +      ++ + L +N I  V + 
Sbjct: 564 LSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSND 623

Query: 164 DFC------------------PPGHNTKKASYSGVSLFSNP 186
            F                    PG  T   S S ++L SNP
Sbjct: 624 TFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSNP 664



 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 54  CPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAASLKGLNNLAKLGLS 106
           CP +C C    V C  LGL       P +   L LD N I+R+      GL NL  L L 
Sbjct: 34  CPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFAGLKNLRVLHLE 93

Query: 107 FNSISAVDNGSLANTPHLRELHLDNNKLTRVP 138
            N +S ++ G+  +   L  L L+ NKL  +P
Sbjct: 94  DNQVSVIERGAFQDLKQLERLRLNKNKLQVLP 125



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P LT L L  N+I  +   + +G+ ++  L L  N IS +++G+      L  L L+NN 
Sbjct: 133 PKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNN 192

Query: 134 LTRVPGGLAEH-KYIQVVYLHNNNI 157
           ++R+      H   I+ + LH+N++
Sbjct: 193 ISRILVTSFNHMPKIRTLRLHSNHL 217



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           SLT L L GNKI+ +      GL +L  L L+ N I+ +   +  +  +L  L L +NKL
Sbjct: 356 SLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKL 415

Query: 135 TRVPGGL-AEHKYIQVVYLHNN 155
             +  GL A  + IQ ++L  N
Sbjct: 416 QTISKGLFAPLQSIQTLHLAQN 437



 Score = 36.2 bits (82), Expect = 0.021
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 32/146 (21%)

Query: 54  CPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGN--------------KISRVDAA 92
           CP  C C   +V C   GL       P  + E+ L+ N              K+ R+D +
Sbjct: 280 CPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDIS 339

Query: 93  ----------SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRV-PGGL 141
                     + +GL +L  L L  N I+ +  G       L+ L L+ NK+  +     
Sbjct: 340 KNQISDIAPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVNTF 399

Query: 142 AEHKYIQVVYLHNNNISVVGSSDFCP 167
            + + + ++ L++N +  +    F P
Sbjct: 400 QDLQNLNLLSLYDNKLQTISKGLFAP 425


>gi|4759146 slit homolog 2 [Homo sapiens]
          Length = 1529

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 17/156 (10%)

Query: 42  DDRDFEPSLGPV--CPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAA 92
           DD + + S  P+  CP  C C   VV+CS+ GL       P  +TEL+LDGN+ + V   
Sbjct: 713 DDGNDDNSCSPLSRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPK- 771

Query: 93  SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEH-KYIQVVY 151
            L    +L  + LS N IS + N S +N   L  L L  N+L  +P    +  K ++++ 
Sbjct: 772 ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLS 831

Query: 152 LHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPV 187
           LH N+ISVV      P G     ++ S +++ +NP+
Sbjct: 832 LHGNDISVV------PEGAFNDLSALSHLAIGANPL 861



 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 7/92 (7%)

Query: 54  CPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAASLKGLNNLAKLGLS 106
           CP +C C    V C  L L       P +   L L+GN I+R+      GL +L  L L 
Sbjct: 28  CPAQCSCSGSTVDCHGLALRSVPRNIPRNTERLDLNGNNITRITKTDFAGLRHLRVLQLM 87

Query: 107 FNSISAVDNGSLANTPHLRELHLDNNKLTRVP 138
            N IS ++ G+  +   L  L L+ N L   P
Sbjct: 88  ENKISTIERGAFQDLKELERLRLNRNHLQLFP 119



 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 54  CPFRCQCHLRVVQCSDLGL-------PPSLTELHLDGNKISRVDAASLKGLNNLAKLGLS 106
           CP  C C   +V C   GL       P ++TE+ L+ N I  +   +      L ++ LS
Sbjct: 273 CPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLS 332

Query: 107 FNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKY-IQVVYLHNNNIS 158
            N IS +   +      L  L L  NK+T +P  L E  + +Q++ L+ N I+
Sbjct: 333 NNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKIN 385



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 76  LTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLT 135
           L  L L  N+I  +   + +G  ++  L L +N IS +++G+      L  L L+NN +T
Sbjct: 129 LYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNIT 188

Query: 136 RVPGGLAEH-KYIQVVYLHNNNI 157
           R+      H   ++   LH+NN+
Sbjct: 189 RLSVASFNHMPKLRTFRLHSNNL 211



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 51/189 (26%)

Query: 40  VPDDRDFEPSLGP------VCPFRCQCHLRVVQCSDLGLP-------------------- 73
           +P   D+   L         CP +C+C    V CS+  L                     
Sbjct: 486 IPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEF 545

Query: 74  ------------PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 121
                       P L +++   NKI+ ++  + +G + + ++ L+ N +  V +      
Sbjct: 546 TVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGL 605

Query: 122 PHLRELHLDNNKLTRVPG----GLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASY 177
             L+ L L +N++T V      GL+    ++++ L++N I+ V       PG      S 
Sbjct: 606 ESLKTLMLRSNRITCVGNDSFIGLSS---VRLLSLYDNQITTVA------PGAFDTLHSL 656

Query: 178 SGVSLFSNP 186
           S ++L +NP
Sbjct: 657 STLNLLANP 665



 Score = 35.0 bits (79), Expect = 0.047
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           SL  L L GNKI+ +  +  +GL +L  L L+ N I+ +   +  +  +L  L L +NKL
Sbjct: 349 SLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 408

Query: 135 -TRVPGGLAEHKYIQVVYLHNN 155
            T   G  +  + IQ ++L  N
Sbjct: 409 QTIAKGTFSPLRAIQTMHLAQN 430


>gi|76880480 hypothetical protein LOC9865 [Homo sapiens]
          Length = 811

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 13/131 (9%)

Query: 48  PSLGPVCPFRCQCH-----------LRVV-QCSDLGLPPSLTELHLDGNKISRVDAASLK 95
           P   PVCP RC C            LRVV + S L  P  +    L GN I+ + A    
Sbjct: 21  PLAEPVCPERCDCQHPQHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGGNFITNITAFDFH 80

Query: 96  GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRV-PGGLAEHKYIQVVYLHN 154
            L  L +L L +N I ++   +      L EL+L NN L  + PG LA  + ++++Y + 
Sbjct: 81  RLGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANG 140

Query: 155 NNISVVGSSDF 165
           N IS +    F
Sbjct: 141 NEISRLSRGSF 151



 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 26/67 (38%), Positives = 42/67 (62%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           +L EL L+GN++S++  A L+ L++L  L LS N +SA+   +  +   LREL L NN L
Sbjct: 278 ALRELRLEGNRLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNAL 337

Query: 135 TRVPGGL 141
           + + G +
Sbjct: 338 SALSGDI 344



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/56 (37%), Positives = 36/56 (64%)

Query: 79  LHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           L+ +GN+ISR+   S +GL +L KL L  N++ A+ +   A   +L  LHL++N++
Sbjct: 136 LYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRI 191



 Score = 35.8 bits (81), Expect = 0.028
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 8/123 (6%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           SL+ L L  N +  +     + L  L  L L  N ++ +   +      LREL L+ N+L
Sbjct: 230 SLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRL 289

Query: 135 TRVPGGLAEHKY-IQVVYLHNNNISVVGSSDFCPPG-------HNTKKASYSGVSLFSNP 186
           +++P  L E  + ++ + L  N +S +  + F   G        N   ++ SG    ++P
Sbjct: 290 SQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAASP 349

Query: 187 VQY 189
             Y
Sbjct: 350 ALY 352



 Score = 27.7 bits (60), Expect = 7.5
 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 11/122 (9%)

Query: 79  LHLDGNKI--SRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTR 136
           L+L  N++  S   AA+   L +L+ L LS N++  +      + P L  L L  N+LT 
Sbjct: 208 LNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTH 267

Query: 137 V-PGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQPS 195
           + P      + ++ + L  N +S + ++    P H+ +    SG  L +       + P+
Sbjct: 268 LAPEAFWGLEALRELRLEGNRLSQLPTA-LLEPLHSLEALDLSGNELSA-------LHPA 319

Query: 196 TF 197
           TF
Sbjct: 320 TF 321


>gi|229089140 leucine rich repeat containing 24 [Homo sapiens]
          Length = 513

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 54  CPFRCQCHLRVVQCS-------DLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLS 106
           CP  C+C+   V+C         LG+PP    L L  N I+R++  +L  L  L +L L 
Sbjct: 23  CPAACRCYSATVECGALRLRVVPLGIPPGTQTLFLQDNNIARLEPGALAPLAALRRLYLH 82

Query: 107 FNSISAVDNGSLANTPHLRELHLDNNKLTRV-PGGLAEHKYIQVVYLHNNNIS 158
            NS+ A++ G+    P L EL L +N+L  +  G       ++V+YL  N ++
Sbjct: 83  NNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQLRVLYLAGNQLA 135



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 22/59 (37%), Positives = 31/59 (52%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNN 132
           P L ELHL  N I  ++  +L GL++LA L LS N +  +   +L     L+ L L  N
Sbjct: 146 PRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISREALQPLASLQVLRLTEN 204



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/73 (28%), Positives = 37/73 (50%)

Query: 62  LRVVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 121
           LR ++       P L EL L  N++  + + +  GL  L  L L+ N ++ + + +  + 
Sbjct: 86  LRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQLRVLYLAGNQLARLLDFTFLHL 145

Query: 122 PHLRELHLDNNKL 134
           P L+ELHL  N +
Sbjct: 146 PRLQELHLQENSI 158



 Score = 30.8 bits (68), Expect = 0.89
 Identities = 20/59 (33%), Positives = 32/59 (54%)

Query: 76  LTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           L  L+L GN+++R+   +   L  L +L L  NSI  +++ +LA    L  L L  N+L
Sbjct: 124 LRVLYLAGNQLARLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQL 182



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 122 PHLRELHLDNNKLTRV-PGGLAEHKYIQVVYLHNNNISVVGSSDF 165
           P  + L L +N + R+ PG LA    ++ +YLHNN++  + +  F
Sbjct: 50  PGTQTLFLQDNNIARLEPGALAPLAALRRLYLHNNSLRALEAGAF 94


>gi|71040111 fibromodulin precursor [Homo sapiens]
          Length = 376

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 3/94 (3%)

Query: 72  LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDN 131
           LP SL ELHLD N+ISRV   +L+GL NL  L L  N I  V   S+     L  L L  
Sbjct: 174 LPRSLRELHLDHNQISRVPNNALEGLENLTALYLQHNEIQEV-GSSMRGLRSLILLDLSY 232

Query: 132 NKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDF 165
           N L +VP GL     ++ +Y+ +NN+  V  S F
Sbjct: 233 NHLRKVPDGLP--SALEQLYMEHNNVYTVPDSYF 264



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 11/109 (10%)

Query: 61  HLRVVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 120
           HLR V     GLP +L +L+++ N +  V  +  +G   L  + LS NS++  +NG  +N
Sbjct: 234 HLRKVPD---GLPSALEQLYMEHNNVYTVPDSYFRGAPKLLYVRLSHNSLT--NNGLASN 288

Query: 121 T---PHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFC 166
           T     L EL L  N+L ++P     +  ++ +YL  N I+    S FC
Sbjct: 289 TFNSSSLLELDLSYNQLQKIP---PVNTNLENLYLQGNRINEFSISSFC 334



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 21/134 (15%)

Query: 38  PEVPDDRDFEPSLGPVCPFRCQCHLR---VVQCSDLGL------PPSLTELHLDGNKISR 88
           P  PD RD        CP  C C       + C +  L      P  +  ++   N+I+ 
Sbjct: 68  PSPPDPRD--------CPQECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQITS 119

Query: 89  VDAASLKGLNNLAKLGLSFNSISA--VDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKY 146
           +          L  + L  N I++  V     +   HL  L+LD+N LTR+PG L   + 
Sbjct: 120 IQEGVFDNATGLLWIALHGNQITSDKVGRKVFSKLRHLERLYLDHNNLTRMPGPLP--RS 177

Query: 147 IQVVYLHNNNISVV 160
           ++ ++L +N IS V
Sbjct: 178 LRELHLDHNQISRV 191


>gi|219521831 adhesion molecule with Ig-like domain 2 [Homo sapiens]
          Length = 522

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)

Query: 48  PSLGPVCPFRCQCHLRVVQCSDLGL---PPSL----TELHLDGNKISRVDA----ASLKG 96
           P    VCP  C C   +V C++  L   P +L      L L  N+I  +D+     S   
Sbjct: 35  PGASGVCPTACICATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIGLLDSEWIPVSFAK 94

Query: 97  LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGL-AEHKYIQVVYLHNN 155
           LN L    L  N+I+++  GS + TP+L+ L L +NKL  V   +  E K ++V+ L+NN
Sbjct: 95  LNTLI---LRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNN 151

Query: 156 NISVVGSSDF 165
           +IS +  S F
Sbjct: 152 HISYLDPSAF 161



 Score = 35.4 bits (80), Expect = 0.036
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P+L  L L  NK+  V  A  + L  L  L L  N IS +D  +      L++L+L  N 
Sbjct: 117 PNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHISYLDPSAFGGLSQLQKLYLSGNF 176

Query: 134 LTRVPGG-------LAEHKYIQVVY 151
           LT+ P         LAE  ++ V Y
Sbjct: 177 LTQFPMDLYVGRFKLAELMFLDVSY 201


>gi|32469517 adhesion molecule with Ig-like domain 2 [Homo sapiens]
          Length = 522

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 15/130 (11%)

Query: 48  PSLGPVCPFRCQCHLRVVQCSDLGL---PPSL----TELHLDGNKISRVDA----ASLKG 96
           P    VCP  C C   +V C++  L   P +L      L L  N+I  +D+     S   
Sbjct: 35  PGASGVCPTACICATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIGLLDSEWIPVSFAK 94

Query: 97  LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGL-AEHKYIQVVYLHNN 155
           LN L    L  N+I+++  GS + TP+L+ L L +NKL  V   +  E K ++V+ L+NN
Sbjct: 95  LNTLI---LRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNN 151

Query: 156 NISVVGSSDF 165
           +IS +  S F
Sbjct: 152 HISYLDPSAF 161



 Score = 35.4 bits (80), Expect = 0.036
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P+L  L L  NK+  V  A  + L  L  L L  N IS +D  +      L++L+L  N 
Sbjct: 117 PNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHISYLDPSAFGGLSQLQKLYLSGNF 176

Query: 134 LTRVPGG-------LAEHKYIQVVY 151
           LT+ P         LAE  ++ V Y
Sbjct: 177 LTQFPMDLYVGRFKLAELMFLDVSY 201


>gi|42544233 leucine rich repeat neuronal 2 [Homo sapiens]
          Length = 713

 Score = 57.4 bits (137), Expect = 9e-09
 Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 27/128 (21%)

Query: 54  CPFRCQCHLR-------------VVQCSDLGL---PPSLTE----LHLDGNKISRVDAAS 93
           CP +C C +R              V C+DL L   PP+L      L L  N I RVD + 
Sbjct: 29  CPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAGTQTLLLQSNSIVRVDQSE 88

Query: 94  LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVP----GGLAEHKYIQV 149
           L  L NL +L LS NS S   +      P L  LHL+ N+LTR+      GLA    +Q 
Sbjct: 89  LGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLAS---LQE 145

Query: 150 VYLHNNNI 157
           +YL++N +
Sbjct: 146 LYLNHNQL 153



 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 21/63 (33%), Positives = 37/63 (58%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           SL EL+L+ N++ R+   +  GL+NL +L L+ N + A+D+      P+L  L +  NK+
Sbjct: 142 SLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKV 201

Query: 135 TRV 137
             +
Sbjct: 202 DAI 204



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 62  LRVVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 121
           LR +      + P+L  L + GNK+  +   + + L NL  L L+  ++  + + +L   
Sbjct: 177 LRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGL 236

Query: 122 PHLRELHLDNNKLTRVP-GGLAEHKYIQVVYLHNNNISVVGSSDF 165
             L  L   +N+L RVP   L +   ++ + L+ N +  VG  DF
Sbjct: 237 QSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDF 281



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLS-FNSISAVDNGSLANTPHLRELHLDNN 132
           P L  L L+ N + RV       + +L +LGL+    + ++D  +L N P L +L + NN
Sbjct: 261 PGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNN 320

Query: 133 -KLTRV-PGGLAEHKYIQVVYLHNNNISVV 160
            +L+ + P        ++ + L+NN +S +
Sbjct: 321 PRLSFIHPRAFHHLPQMETLMLNNNALSAL 350



 Score = 35.8 bits (81), Expect = 0.028
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDN 131
           SL  L    N+++RV   +L+ +  L  L L+ N +  V  G  AN  HL+EL L+N
Sbjct: 238 SLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNN 294


>gi|42544231 leucine rich repeat neuronal 2 [Homo sapiens]
          Length = 713

 Score = 57.4 bits (137), Expect = 9e-09
 Identities = 46/128 (35%), Positives = 61/128 (47%), Gaps = 27/128 (21%)

Query: 54  CPFRCQCHLR-------------VVQCSDLGL---PPSLTE----LHLDGNKISRVDAAS 93
           CP +C C +R              V C+DL L   PP+L      L L  N I RVD + 
Sbjct: 29  CPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALPAGTQTLLLQSNSIVRVDQSE 88

Query: 94  LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVP----GGLAEHKYIQV 149
           L  L NL +L LS NS S   +      P L  LHL+ N+LTR+      GLA    +Q 
Sbjct: 89  LGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQLTRLEDHSFAGLAS---LQE 145

Query: 150 VYLHNNNI 157
           +YL++N +
Sbjct: 146 LYLNHNQL 153



 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 21/63 (33%), Positives = 37/63 (58%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           SL EL+L+ N++ R+   +  GL+NL +L L+ N + A+D+      P+L  L +  NK+
Sbjct: 142 SLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKV 201

Query: 135 TRV 137
             +
Sbjct: 202 DAI 204



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 62  LRVVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 121
           LR +      + P+L  L + GNK+  +   + + L NL  L L+  ++  + + +L   
Sbjct: 177 LRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGL 236

Query: 122 PHLRELHLDNNKLTRVP-GGLAEHKYIQVVYLHNNNISVVGSSDF 165
             L  L   +N+L RVP   L +   ++ + L+ N +  VG  DF
Sbjct: 237 QSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDF 281



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLS-FNSISAVDNGSLANTPHLRELHLDNN 132
           P L  L L+ N + RV       + +L +LGL+    + ++D  +L N P L +L + NN
Sbjct: 261 PGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNN 320

Query: 133 -KLTRV-PGGLAEHKYIQVVYLHNNNISVV 160
            +L+ + P        ++ + L+NN +S +
Sbjct: 321 PRLSFIHPRAFHHLPQMETLMLNNNALSAL 350



 Score = 35.8 bits (81), Expect = 0.028
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDN 131
           SL  L    N+++RV   +L+ +  L  L L+ N +  V  G  AN  HL+EL L+N
Sbjct: 238 SLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNN 294


>gi|4557543 extracellular matrix protein 2 precursor [Homo sapiens]
          Length = 699

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 72  LPPSLTELHLDGNKISRVDAASLKGLN-NLAKLGLSFNSIS--AVDNGSLANTPH-LREL 127
           LP SL  L L GN+I R+       +   L  L LSFN ++   +D  S     H LREL
Sbjct: 554 LPKSLLHLVLLGNQIERIPGYVFGHMEPGLEYLYLSFNKLADDGMDRVSFYGAYHSLREL 613

Query: 128 HLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPV 187
            LD+N L  +P G+ E K +  + L+NN I  +   + C        ++   + L +N +
Sbjct: 614 FLDHNDLKSIPPGIQEMKALHFLRLNNNKIRNILPEEIC-NAEEDDDSNLEHLHLENNYI 672

Query: 188 QYWEIQPSTFRCVYVRSAIQL 208
           +  EI   TF C+   S+I L
Sbjct: 673 KIREIPSYTFSCIRSYSSIVL 693



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 11/115 (9%)

Query: 55  PFRCQCHLRVVQCSDLGLP-------PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSF 107
           P  C    R + C +  L        P +T L L GN I+ +   +  GL NL +L LS 
Sbjct: 317 PSGCSLSYRTISCINAMLTQIPPLTAPQITSLELTGNSIASIPDEAFNGLPNLERLDLSK 376

Query: 108 NSISAVDNGSLA--NTPHLRELHLDNNKLTRVPGGLAEHKYIQVVYLHNNNISVV 160
           N+I++   G  A      L  L++D N L ++P  L     ++ + ++ NN+  +
Sbjct: 377 NNITSSGIGPKAFKLLKKLMRLNMDGNNLIQIPSQLP--STLEELKVNENNLQAI 429



 Score = 35.4 bits (80), Expect = 0.036
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 71  GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLA--NTPHLRELH 128
           GLP S+ EL+L+ N+I  +          +  + L +N I       LA  N  +L  + 
Sbjct: 482 GLPGSIEELYLENNQIEEITEICFNHTRKINVIVLRYNKIEENRIAPLAWINQENLESID 541

Query: 129 LDNNKLTRVPGGLAEHKYIQVVYLHN 154
           L  NKL  VP  L +   + +V L N
Sbjct: 542 LSYNKLYHVPSYLPK-SLLHLVLLGN 566


>gi|13375646 leucine rich repeat and fibronectin type III domain
           containing 3 [Homo sapiens]
          Length = 628

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 48/141 (34%), Positives = 66/141 (46%), Gaps = 14/141 (9%)

Query: 54  CPFRCQCHLRV----VQCSDLGL---PPSL----TELHLDGNKISRVDAASLKGLNNLAK 102
           CP RC+C  +     V C   GL   PPSL     EL L  N I+ V    L  +  L  
Sbjct: 28  CPRRCRCQTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLADNFIASVRRRDLANMTGLLH 87

Query: 103 LGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRV-PGGLAEHKYIQVVYLHNNNISVV- 160
           L LS N+I  V  G+ A+   LR LHLD N+LT +  G L     ++ + L NN ++ + 
Sbjct: 88  LSLSRNTIRHVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALA 147

Query: 161 -GSSDFCPPGHNTKKASYSGV 180
            G+ D C         SY+ +
Sbjct: 148 AGALDDCAETLEDLDLSYNNL 168



 Score = 38.1 bits (87), Expect = 0.006
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 25/91 (27%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRE-------- 126
           +L  LHLDGN+++ +    L+GL NL  L LS N ++A+  G+L +     E        
Sbjct: 108 ALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAALAAGALDDCAETLEDLDLSYNN 167

Query: 127 -----------------LHLDNNKLTRVPGG 140
                            L LD+N L  VP G
Sbjct: 168 LEQLPWEALGRLGNVNTLGLDHNLLASVPAG 198



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 19/64 (29%), Positives = 35/64 (54%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           +L +L L  N + ++   +L  L N+  LGL  N +++V  G+ +    L  L + +N+L
Sbjct: 157 TLEDLDLSYNNLEQLPWEALGRLGNVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRL 216

Query: 135 TRVP 138
           T +P
Sbjct: 217 TTIP 220


>gi|157426829 leucine rich repeat and Ig domain containing 3 [Homo
           sapiens]
          Length = 592

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 9/97 (9%)

Query: 54  CPFRCQCHL--RVVQCSDL-------GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLG 104
           CP RC+C +  R V C+         G+P     L L  N+I  ++   L  L  L +L 
Sbjct: 25  CPARCECTVQTRAVACTRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLAALPALEELD 84

Query: 105 LSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGL 141
           LS N+I+ V+ G+ AN P LR L L  N+L  +P G+
Sbjct: 85  LSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGV 121



 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           +LT L +    I+ V AA+L+   +L  L LS N IS V  GS  +   LRELHL    L
Sbjct: 247 NLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALL 306

Query: 135 TRV-PGGLAEHKYIQVVYLHNNNISVVGSSDF 165
             V P      + I+++ L NN +S +  S F
Sbjct: 307 AVVEPQAFLGLRQIRLLNLSNNLLSTLEESTF 338



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 61  HLRVVQCSDLGLP--PSLTELHLDG-NKISRVDAASLKGLNNLAKLGLSFNSISAVDNGS 117
           HL +    D      P L  L +D    +  V A SL+GLN L  L ++  +I+AV   +
Sbjct: 207 HLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLN-LTSLSVTHTNITAVPAAA 265

Query: 118 LANTPHLRELHLDNNKLTRVPGG 140
           L +  HL  L+L +N ++ VP G
Sbjct: 266 LRHQAHLTCLNLSHNPISTVPRG 288



 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P L  L L GN++  +       L+NL  L LS N +  + + +  +   LR L + +N 
Sbjct: 102 PRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDND 161

Query: 134 LTRV 137
           L  V
Sbjct: 162 LVFV 165


>gi|38202222 fibronectin leucine rich transmembrane protein 3
           precursor [Homo sapiens]
          Length = 649

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 32/139 (23%)

Query: 54  CPFRCQCHLRVVQCSD-------LGLPPSLTELHLDGNKISRVDAAS-LKGL-------- 97
           CP  C+C    + C+D        G+P   T L+L  N+I+     S LK L        
Sbjct: 31  CPSVCRCDAGFIYCNDRFLTSIPTGIPEDATTLYLQNNQINNAGIPSDLKNLLKVERIYL 90

Query: 98  ---------NNLAK----LGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRV---PGGL 141
                     NL K    L L  N+I  +   SL+  P+L ELHLD+N ++ V    G  
Sbjct: 91  YHNSLDEFPTNLPKYVKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSAVSIEEGAF 150

Query: 142 AEHKYIQVVYLHNNNISVV 160
            +  Y+++++L  N++S +
Sbjct: 151 RDSNYLRLLFLSRNHLSTI 169



 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 4/93 (4%)

Query: 72  LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAV--DNGSLANTPHLRELHL 129
           LP  + ELHL  N I  +   SL  +  L +L L  NS+SAV  + G+  ++ +LR L L
Sbjct: 102 LPKYVKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSAVSIEEGAFRDSNYLRLLFL 161

Query: 130 DNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGS 162
             N L+ +P GL   + I+ + L +N IS + S
Sbjct: 162 SRNHLSTIPWGLP--RTIEELRLDDNRISTISS 192



 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 71  GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSIS--AVDNGSLANTPHLRELH 128
           GLP ++ EL LD N+IS + + SL+GL +L +L L  N ++   + +    N  +L EL 
Sbjct: 172 GLPRTIEELRLDDNRISTISSPSLQGLTSLKRLVLDGNLLNNHGLGDKVFFNLVNLTELS 231

Query: 129 LDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDF 165
           L  N LT  P  L     ++ +YL +N+I+ V  + F
Sbjct: 232 LVRNSLTAAPVNLPGTN-LRKLYLQDNHINRVPPNAF 267


>gi|7019383 fibronectin leucine rich transmembrane protein 3
           precursor [Homo sapiens]
          Length = 649

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 32/139 (23%)

Query: 54  CPFRCQCHLRVVQCSD-------LGLPPSLTELHLDGNKISRVDAAS-LKGL-------- 97
           CP  C+C    + C+D        G+P   T L+L  N+I+     S LK L        
Sbjct: 31  CPSVCRCDAGFIYCNDRFLTSIPTGIPEDATTLYLQNNQINNAGIPSDLKNLLKVERIYL 90

Query: 98  ---------NNLAK----LGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRV---PGGL 141
                     NL K    L L  N+I  +   SL+  P+L ELHLD+N ++ V    G  
Sbjct: 91  YHNSLDEFPTNLPKYVKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSAVSIEEGAF 150

Query: 142 AEHKYIQVVYLHNNNISVV 160
            +  Y+++++L  N++S +
Sbjct: 151 RDSNYLRLLFLSRNHLSTI 169



 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 4/93 (4%)

Query: 72  LPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAV--DNGSLANTPHLRELHL 129
           LP  + ELHL  N I  +   SL  +  L +L L  NS+SAV  + G+  ++ +LR L L
Sbjct: 102 LPKYVKELHLQENNIRTITYDSLSKIPYLEELHLDDNSVSAVSIEEGAFRDSNYLRLLFL 161

Query: 130 DNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGS 162
             N L+ +P GL   + I+ + L +N IS + S
Sbjct: 162 SRNHLSTIPWGLP--RTIEELRLDDNRISTISS 192



 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 3/97 (3%)

Query: 71  GLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSIS--AVDNGSLANTPHLRELH 128
           GLP ++ EL LD N+IS + + SL+GL +L +L L  N ++   + +    N  +L EL 
Sbjct: 172 GLPRTIEELRLDDNRISTISSPSLQGLTSLKRLVLDGNLLNNHGLGDKVFFNLVNLTELS 231

Query: 129 LDNNKLTRVPGGLAEHKYIQVVYLHNNNISVVGSSDF 165
           L  N LT  P  L     ++ +YL +N+I+ V  + F
Sbjct: 232 LVRNSLTAAPVNLPGTN-LRKLYLQDNHINRVPPNAF 267


>gi|4758460 glycoprotein V (platelet) [Homo sapiens]
          Length = 560

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 10/122 (8%)

Query: 54  CPFRCQCHLR---------VVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLG 104
           CP  C+C  R         V + S LGLP +LT + L G     + + S  G+  L +L 
Sbjct: 21  CPPACKCVFRDAAQCSGGDVARISALGLPTNLTHILLFGMGRGVLQSQSFSGMTVLQRLM 80

Query: 105 LSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHK-YIQVVYLHNNNISVVGSS 163
           +S + ISAV  G+ ++   L+ L L  NK+T +PG L +    ++ ++L +N +  +  +
Sbjct: 81  ISDSHISAVAPGTFSDLIKLKTLRLSRNKITHLPGALLDKMVLLEQLFLDHNALRGIDQN 140

Query: 164 DF 165
            F
Sbjct: 141 MF 142



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           +LTEL    N I  +   +   L NL+ L LS N ++ + +    ++ +L  L L  N L
Sbjct: 219 ALTELQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPL 278

Query: 135 TRVPGGL-AEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSL 182
             +PG L  E   +Q ++L+   +  + ++ F     N  +  Y GV+L
Sbjct: 279 AELPGVLFGEMGGLQELWLNRTQLRTLPAAAF----RNLSRLRYLGVTL 323



 Score = 35.8 bits (81), Expect = 0.028
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 76  LTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLT 135
           L  L L  N ++ +    L+GL  L ++ L  N + A+      N   L  + LD+N+L 
Sbjct: 341 LQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRNLSSLESVQLDHNQLE 400

Query: 136 RVPGGL--AEHKYIQVVYLHNN 155
            +PG +  A  +  +V+  HN+
Sbjct: 401 TLPGDVFGALPRLTEVLLGHNS 422



 Score = 34.7 bits (78), Expect = 0.061
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 85  KISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEH 144
           ++S +   + +GL  L  L L  N ++A+ +G L     LR++ L  N+L  +P  L  +
Sbjct: 326 RLSALPQGAFQGLGELQVLALHSNGLTALPDGLLRGLGKLRQVSLRRNRLRALPRALFRN 385

Query: 145 -KYIQVVYLHNNNISVVGSSDF 165
              ++ V L +N +  +    F
Sbjct: 386 LSSLESVQLDHNQLETLPGDVF 407



 Score = 33.1 bits (74), Expect = 0.18
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           +L  L L GN ++ +    L     L +L L  N + ++D+G L +   L EL    N +
Sbjct: 171 NLKLLDLSGNNLTHLPKGLLGAQAKLERLLLHSNRLVSLDSGLLNSLGALTELQFHRNHI 230

Query: 135 TRV-PGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPV 187
             + PG       +  + L  N+++ + S+ F    HN      + ++LF NP+
Sbjct: 231 RSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFL-HSHN-----LTLLTLFENPL 278


>gi|153791507 leucine rich repeat neuronal 3 [Homo sapiens]
          Length = 708

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 22/133 (16%)

Query: 54  CPFRCQCHLR-------------VVQCSDLGL-------PPSLTELHLDGNKISRVDAAS 93
           CP  C C +R              V C+DLGL       P +   L L  N I++++ ++
Sbjct: 29  CPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPANTQILLLQTNNIAKIEYST 88

Query: 94  LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGG-LAEHKYIQVVYL 152
              +N L  L LS N++S+V N ++   P L  ++L+ NKLT +P   L+E   +Q +Y+
Sbjct: 89  DFPVN-LTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYI 147

Query: 153 HNNNISVVGSSDF 165
           ++N +S +    F
Sbjct: 148 NHNLLSTISPGAF 160



 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 2/114 (1%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P L  ++L+ NK++ +    L  L+NL +L ++ N +S +  G+     +L  LHL++N+
Sbjct: 116 PQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNR 175

Query: 134 LTRVPGGLAEH-KYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNP 186
           L  +     +    ++++ +  N I  +   +F  P  N +    +G++L   P
Sbjct: 176 LQMINSKWFDALPNLEILMIGENPIIRIKDMNF-KPLINLRSLVIAGINLTEIP 228



 Score = 33.9 bits (76), Expect = 0.10
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P+L  L +  N I R+   + K L NL  L ++  +++ + + +L    +L  +   +N+
Sbjct: 188 PNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNR 247

Query: 134 LTRVPGGLAEHKYIQVVY--LHNNNISVVGSSDF 165
           L +VP  +A  K + + +  L+ N I+ +   DF
Sbjct: 248 LIKVP-HVALQKVVNLKFLDLNKNPINRIRRGDF 280


>gi|153792651 leucine rich repeat neuronal 3 [Homo sapiens]
          Length = 708

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 22/133 (16%)

Query: 54  CPFRCQCHLR-------------VVQCSDLGL-------PPSLTELHLDGNKISRVDAAS 93
           CP  C C +R              V C+DLGL       P +   L L  N I++++ ++
Sbjct: 29  CPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPANTQILLLQTNNIAKIEYST 88

Query: 94  LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGG-LAEHKYIQVVYL 152
              +N L  L LS N++S+V N ++   P L  ++L+ NKLT +P   L+E   +Q +Y+
Sbjct: 89  DFPVN-LTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYI 147

Query: 153 HNNNISVVGSSDF 165
           ++N +S +    F
Sbjct: 148 NHNLLSTISPGAF 160



 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 2/114 (1%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P L  ++L+ NK++ +    L  L+NL +L ++ N +S +  G+     +L  LHL++N+
Sbjct: 116 PQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNR 175

Query: 134 LTRVPGGLAEH-KYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNP 186
           L  +     +    ++++ +  N I  +   +F  P  N +    +G++L   P
Sbjct: 176 LQMINSKWFDALPNLEILMIGENPIIRIKDMNF-KPLINLRSLVIAGINLTEIP 228



 Score = 33.9 bits (76), Expect = 0.10
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P+L  L +  N I R+   + K L NL  L ++  +++ + + +L    +L  +   +N+
Sbjct: 188 PNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNR 247

Query: 134 LTRVPGGLAEHKYIQVVY--LHNNNISVVGSSDF 165
           L +VP  +A  K + + +  L+ N I+ +   DF
Sbjct: 248 LIKVP-HVALQKVVNLKFLDLNKNPINRIRRGDF 280


>gi|153792227 leucine rich repeat neuronal 3 [Homo sapiens]
          Length = 708

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 22/133 (16%)

Query: 54  CPFRCQCHLR-------------VVQCSDLGL-------PPSLTELHLDGNKISRVDAAS 93
           CP  C C +R              V C+DLGL       P +   L L  N I++++ ++
Sbjct: 29  CPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPANTQILLLQTNNIAKIEYST 88

Query: 94  LKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGG-LAEHKYIQVVYL 152
              +N L  L LS N++S+V N ++   P L  ++L+ NKLT +P   L+E   +Q +Y+
Sbjct: 89  DFPVN-LTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYI 147

Query: 153 HNNNISVVGSSDF 165
           ++N +S +    F
Sbjct: 148 NHNLLSTISPGAF 160



 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 2/114 (1%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P L  ++L+ NK++ +    L  L+NL +L ++ N +S +  G+     +L  LHL++N+
Sbjct: 116 PQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNR 175

Query: 134 LTRVPGGLAEH-KYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNP 186
           L  +     +    ++++ +  N I  +   +F  P  N +    +G++L   P
Sbjct: 176 LQMINSKWFDALPNLEILMIGENPIIRIKDMNF-KPLINLRSLVIAGINLTEIP 228



 Score = 33.9 bits (76), Expect = 0.10
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P+L  L +  N I R+   + K L NL  L ++  +++ + + +L    +L  +   +N+
Sbjct: 188 PNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNR 247

Query: 134 LTRVPGGLAEHKYIQVVY--LHNNNISVVGSSDF 165
           L +VP  +A  K + + +  L+ N I+ +   DF
Sbjct: 248 LIKVP-HVALQKVVNLKFLDLNKNPINRIRRGDF 280


>gi|149773484 leucine rich repeat and fibronectin type III domain
           containing 1 [Homo sapiens]
          Length = 771

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 18/132 (13%)

Query: 49  SLGPVCPFRCQCH----LRVVQCSDLGL---PPSL----TELHLDGNKISRVDAASLKGL 97
           S G  CP RC C        + C+  GL   PP++     EL L  N I+ V       +
Sbjct: 29  SRGQPCPGRCICQNVAPTLTMLCAKTGLLFVPPAIDRRVVELRLTDNFIAAVRRRDFANM 88

Query: 98  NNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPG----GLAEHKYIQVVYLH 153
            +L  L LS N+I  V  G+ A+   LR LHLD+N+L  V G    GL   +++    L 
Sbjct: 89  TSLVHLTLSRNTIGQVAAGAFADLRALRALHLDSNRLAEVRGDQLRGLGNLRHL---ILG 145

Query: 154 NNNISVVGSSDF 165
           NN I  V S+ F
Sbjct: 146 NNQIRRVESAAF 157



 Score = 33.5 bits (75), Expect = 0.14
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 75  SLTELHLDGNKISRVDAASLKG-LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           +L  L L  N+I RV++A+    L+ +  L LS+N++ A+   ++    +L  L LD+N 
Sbjct: 138 NLRHLILGNNQIRRVESAAFDAFLSTVEDLDLSYNNLEALPWEAVGQMVNLNTLTLDHNL 197

Query: 134 LTRVPGG--LAEHKYIQV 149
           +  +  G  +  HK +++
Sbjct: 198 IDHIAEGTFVQLHKLVRL 215


>gi|31542244 leucine rich repeat and fibronectin type III domain
           containing 5 [Homo sapiens]
          Length = 719

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 12/125 (9%)

Query: 53  VCPFRCQCHLR----VVQCSDLGL---PPSL----TELHLDGNKISRVDAASLKGLNNLA 101
           +CP RC C +        C+  GL   PP++     EL L  N ++ +       + +L 
Sbjct: 19  ICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLV 78

Query: 102 KLGLSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGL-AEHKYIQVVYLHNNNISVV 160
            L LS N+IS +   + A+  +LR LHL++N+LT++   + +    +  + L+NN ++++
Sbjct: 79  DLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLI 138

Query: 161 GSSDF 165
            S+ F
Sbjct: 139 SSTAF 143



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           +L  LHL+ N+++++      GL+NL  L L+ N ++ + + +  +   L EL L  N L
Sbjct: 100 NLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNL 159

Query: 135 TRVPGGLAEHKYIQVVYLH 153
             +P    E    ++V LH
Sbjct: 160 ETIPWDAVE----KMVSLH 174



 Score = 35.0 bits (79), Expect = 0.047
 Identities = 17/70 (24%), Positives = 36/70 (51%)

Query: 75  SLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNKL 134
           +L  L L+ N+++ + + +   +  L +L LS+N++  +   ++     L  L LD+N +
Sbjct: 124 NLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMI 183

Query: 135 TRVPGGLAEH 144
             +P G   H
Sbjct: 184 DNIPKGTFSH 193


>gi|62912472 leucine-rich repeat-containing G protein-coupled
           receptor 6 isoform 2 [Homo sapiens]
          Length = 915

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 1/93 (1%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           PSL  L LD N IS V   S +GL++L  L L  N+++ +   +L N P L+ + L  N+
Sbjct: 86  PSLQSLRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNR 145

Query: 134 LTRVPGGLAEH-KYIQVVYLHNNNISVVGSSDF 165
           ++ +P    ++   + V++LHNN I  +G+  F
Sbjct: 146 ISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSF 178



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P+L  + L  N+IS +   + + L +L  L L  N I  +   S     +L  L L+ NK
Sbjct: 134 PALQAMTLALNRISHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLDLNYNK 193

Query: 134 LTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQY 189
           L   P  +     +Q +  HNNNI  +    F              +  + NP+Q+
Sbjct: 194 LQEFPVAIRTLGRLQELGFHNNNIKAIPEKAF------MGNPLLQTIHFYDNPIQF 243



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 61  HLRVVQCSDLGLPPSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLAN 120
           H ++ +   L     L E+ L  N+I  + A +   L++L  L LS+N+I ++   + + 
Sbjct: 309 HNQIEELPSLHRCQKLEEIGLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFST 368

Query: 121 TPHLRELHLDNNKLTRVP----GGLAEHK 145
              L +L L +N+LT +P    GGL   K
Sbjct: 369 LHSLVKLDLTDNQLTTLPLAGLGGLMHLK 397



 Score = 35.0 bits (79), Expect = 0.047
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 10/128 (7%)

Query: 74  PSLTELHLDGNKISRVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLDNNK 133
           P L  L L+G  +   +   LKG  +L  L L+   I  + +G     P LR L L +N+
Sbjct: 253 PKLHTLSLNG-AMDIQEFPDLKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQ 311

Query: 134 LTRVPGGLAEHKYIQVVYLHNNNISVVGSSDFCPPGHNTKKASYSGVSLFSNPVQYWEIQ 193
           +  +P  L   + ++ + L +N I  +G+  F      ++ +S   + L  N ++   I 
Sbjct: 312 IEELP-SLHRCQKLEEIGLQHNRIWEIGADTF------SQLSSLQALDLSWNAIR--SIH 362

Query: 194 PSTFRCVY 201
           P  F  ++
Sbjct: 363 PEAFSTLH 370



 Score = 30.8 bits (68), Expect = 0.89
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 105 LSFNSISAVDNGSLANTPHLRELHLDNNKLTRVPGGLAEHKY-IQVVYLHNNNI 157
           LS N+++ +  G   +   L EL L  N L+ +PG      Y ++++ L NN +
Sbjct: 21  LSMNNLTELQPGLFHHLRFLEELRLSGNHLSHIPGQAFSGLYSLKILMLQNNQL 74


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,760,026
Number of Sequences: 37866
Number of extensions: 390098
Number of successful extensions: 1801
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 805
Number of HSP's gapped (non-prelim): 816
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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