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Search of human proteins with 194440668
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens]
(395 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens] 801 0.0
gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens] 708 0.0
gi|22749337 THAP domain containing 8 [Homo sapiens] 103 3e-22
gi|31982895 THAP domain containing 4 [Homo sapiens] 96 4e-20
gi|8922446 THAP domain containing, apoptosis associated protein ... 72 1e-12
gi|42734379 THAP domain containing, apoptosis associated protein... 70 3e-12
gi|13899259 THAP domain containing, apoptosis associated protein... 68 2e-11
gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens] 60 3e-09
gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens] 60 3e-09
gi|94536788 THAP domain containing 9 [Homo sapiens] 56 6e-08
gi|21389507 THAP domain containing 6 [Homo sapiens] 53 4e-07
gi|19923268 protein-kinase, interferon-inducible double stranded... 52 1e-06
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti... 47 4e-05
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l... 39 0.006
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 39 0.006
gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-l... 39 0.006
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l... 39 0.006
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti... 38 0.014
gi|46852178 potassium channel modulatory factor 1 [Homo sapiens] 38 0.018
gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens] 37 0.024
gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens] 37 0.024
gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens] 37 0.024
gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-l... 37 0.041
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 37 0.041
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 37 0.041
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 37 0.041
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 36 0.053
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 36 0.053
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 36 0.053
gi|124249396 coiled-coil domain containing 30 [Homo sapiens] 36 0.069
>gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens]
Length = 395
Score = 801 bits (2070), Expect = 0.0
Identities = 395/395 (100%), Positives = 395/395 (100%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSDH 60
MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSDH
Sbjct: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSDH 60
Query: 61 FTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNLEDEKEVCPKAKSEES 120
FTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNLEDEKEVCPKAKSEES
Sbjct: 61 FTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNLEDEKEVCPKAKSEES 120
Query: 121 FVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTL 180
FVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTL
Sbjct: 121 FVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTL 180
Query: 181 ETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSN 240
ETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSN
Sbjct: 181 ETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSN 240
Query: 241 SMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTEMED 300
SMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTEMED
Sbjct: 241 SMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTEMED 300
Query: 301 TDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLK 360
TDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLK
Sbjct: 301 TDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLK 360
Query: 361 SLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI 395
SLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI
Sbjct: 361 SLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI 395
>gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens]
Length = 353
Score = 708 bits (1828), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 43 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK 102
MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK
Sbjct: 1 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK 60
Query: 103 KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN 162
KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN
Sbjct: 61 KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN 120
Query: 163 MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ 222
MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ
Sbjct: 121 MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ 180
Query: 223 EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK 282
EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK
Sbjct: 181 EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK 240
Query: 283 PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH 342
PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH
Sbjct: 241 PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH 300
Query: 343 SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI 395
SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI
Sbjct: 301 SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI 353
>gi|22749337 THAP domain containing 8 [Homo sapiens]
Length = 274
Score = 103 bits (257), Expect = 3e-22
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 9/114 (7%)
Query: 1 MPRYCAAICCKNRRGRNNKD-RKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSD 59
MP+YC A C N GR D R +SFY FPL D RL+ WL++M + WVPS +Q LCS+
Sbjct: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE 60
Query: 60 HFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNLEDEKEVCP 113
HFTP RWG+RYL+ AVP+IFS + P KSQ++ +K V P
Sbjct: 61 HFTPSCFQWRWGVRYLRPDAVPSIFS-------RGP-PAKSQRRTRSTQKPVSP 106
>gi|31982895 THAP domain containing 4 [Homo sapiens]
Length = 577
Score = 96.3 bits (238), Expect = 4e-20
Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 5 CAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSDHFTPD 64
CAA+ C NR+G+ K R +SF+ FPL D +RL +WLK ++RD+W P+KY FLCS+HFT D
Sbjct: 5 CAAVNCSNRQGKGEK-RAVSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKD 63
Query: 65 SLDIRW--GIRYLKQTAVPTIFSLPEDNQG 92
S R R LK TAVP+IF L E +G
Sbjct: 64 SFSKRLEDQHRLLKPTAVPSIFHLTEKKRG 93
>gi|8922446 THAP domain containing, apoptosis associated protein 1
isoform 1 [Homo sapiens]
Length = 213
Score = 71.6 bits (174), Expect = 1e-12
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSDH 60
M + C+A CKNR +KD+ +SF+ FPL ++W ++R ++ P+KY +CS+H
Sbjct: 1 MVQSCSAYGCKNRY---DKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEH 57
Query: 61 FTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKD 94
FTPD + LK+ AVPTIF E + K+
Sbjct: 58 FTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKE 91
>gi|42734379 THAP domain containing, apoptosis associated protein 3
[Homo sapiens]
Length = 175
Score = 70.5 bits (171), Expect = 3e-12
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSDH 60
MP+ CAA C NR K +L+F+ FP E L++W+ N+ R ++ P ++ +CS+H
Sbjct: 1 MPKSCAARQCCNRYSSRRK--QLTFHRFPFSRPELLKEWVLNIGRGNFKPKQHTVICSEH 58
Query: 61 FTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQ----GKDPSKKKSQKKNLEDEK------E 110
F P+ + LK AVPT+F+ + Q DP+ ++ + + EK +
Sbjct: 59 FRPECFSAFGNRKNLKHNAVPTVFAFQDPTQQVRENTDPASERGNASSSQKEKTSPCRSQ 118
Query: 111 VCPKAKSEE 119
V P+A + E
Sbjct: 119 VLPEAGAGE 127
>gi|13899259 THAP domain containing, apoptosis associated protein 2
[Homo sapiens]
Length = 228
Score = 67.8 bits (164), Expect = 2e-11
Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 26/151 (17%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSDH 60
MP CAA C NK +SF+ FPL K R E W++ ++R ++VP K+ FLCS H
Sbjct: 1 MPTNCAAAGCATTY---NKHINISFHRFPLDPKRRKE-WVRLVRRKNFVPGKHTFLCSKH 56
Query: 61 FTPDSLDIRWGIRYLKQTAVPTIF--------------SLPEDNQGKDPSKKKSQKKNLE 106
F D+ R LK AVPTIF +L + N P+ + K N+
Sbjct: 57 FEASCFDLTGQTRRLKMDAVPTIFDFCTHIKSMKLKSRNLLKKNNSCSPAGPSNLKSNIS 116
Query: 107 DEKEVCPKAKSEESFVLN---ETKKNIVNTD 134
++ + E S+ E KK I+ +
Sbjct: 117 SQQVLL-----EHSYAFRNPMEAKKRIIKLE 142
>gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens]
Length = 309
Score = 60.1 bits (144), Expect = 3e-09
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKR------DSWVP-SKY 53
MPR+C+A C R R ++R +SF+ P D R WL N +R W P S+Y
Sbjct: 1 MPRHCSAAGCCTRDTRETRNRGISFHRLPKKDNPRRGLWLANCQRLDPSGQGLWDPASEY 60
Query: 54 QFLCSDHFTPDSLDIRW--GIRYLKQTAVPTIF 84
+ CS HF D ++ G LK+ AVPTIF
Sbjct: 61 IYFCSKHFEEDCFELVGISGYHRLKEGAVPTIF 93
>gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens]
Length = 309
Score = 60.1 bits (144), Expect = 3e-09
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKR------DSWVP-SKY 53
MPR+C+A C R R ++R +SF+ P D R WL N +R W P S+Y
Sbjct: 1 MPRHCSAAGCCTRDTRETRNRGISFHRLPKKDNPRRGLWLANCQRLDPSGQGLWDPASEY 60
Query: 54 QFLCSDHFTPDSLDIRW--GIRYLKQTAVPTIF 84
+ CS HF D ++ G LK+ AVPTIF
Sbjct: 61 IYFCSKHFEEDCFELVGISGYHRLKEGAVPTIF 93
>gi|94536788 THAP domain containing 9 [Homo sapiens]
Length = 903
Score = 55.8 bits (133), Expect = 6e-08
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKRDS------WVPSKYQ 54
M R C+A+ C R +++R LSF+ FP +R KW++ + R W+P
Sbjct: 1 MTRSCSAVGCSTRDTVLSRERGLSFHQFPTDTIQR-SKWIRAVNRVDPRSKKIWIPGPGA 59
Query: 55 FLCSDHFTPDSLDIRWGIRYLKQTAVPTI--FSLPEDNQGKDPSKKKSQKKNLEDEKE 110
LCS HF + R LK+ AVP++ + +P+ K +++K K+ L D +
Sbjct: 60 ILCSKHFQESDFESYGIRRKLKKGAVPSVSLYKIPQGVHLKGKARQKILKQPLPDNSQ 117
>gi|21389507 THAP domain containing 6 [Homo sapiens]
Length = 222
Score = 53.1 bits (126), Expect = 4e-07
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKR------DSWVPSKYQ 54
M + C+AI C +R N+K + L+F+ FP D+ KW+ MKR W P K
Sbjct: 1 MVKCCSAIGCASRCLPNSKLKGLTFHVFPT-DENIKRKWVLAMKRLDVNAAGIWEPKKGD 59
Query: 55 FLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGK 93
LCS HF D LK +P+IF P QGK
Sbjct: 60 VLCSRHFKKTDFDRSAPNIKLKPGVIPSIFDSPYHLQGK 98
>gi|19923268 protein-kinase, interferon-inducible double stranded
RNA dependent inhibitor, repressor of (P58 repressor)
[Homo sapiens]
Length = 761
Score = 51.6 bits (122), Expect = 1e-06
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 1 MPRYCAAICCKNRRGRNNKDRKLSFYPFPLHDKERLEKWLKNMKR---DSWVP---SKYQ 54
MP +CAA C R + L+F+ FP D R +KW++N +R + P +K+
Sbjct: 1 MPNFCAAPNCT----RKSTQSDLAFFRFP-RDPARCQKWVENCRRADLEDKTPDQLNKHY 55
Query: 55 FLCSDHFTPDSLDIRWGIR-YLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNLEDEKEVCP 113
LC+ HF + R L+ A+PTIF L +K K+ EDE
Sbjct: 56 RLCAKHFETSMICRTSPYRTVLRDNAIPTIFDLTSHLNNPHSRHRKRIKELSEDEIRTLK 115
Query: 114 KAKSEESFVLNETKKNIVNTDVPHQHPE 141
+ K +E+ + K N++ + E
Sbjct: 116 QKKIDETSEQEQKHKETNNSNAQNPSEE 143
>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
[Homo sapiens]
Length = 909
Score = 46.6 bits (109), Expect = 4e-05
Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 9/191 (4%)
Query: 126 TKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVN 185
T N + H P + S + + P+ T S +++ T T S++ T+
Sbjct: 151 TSSNTITETTSHSTPSYITSITTTETPSSSTPSFSSSITTTETTSHSTPGFTSSITTTET 210
Query: 186 QDTGRGGFHTCFENLNST-------TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFT 238
F + +T T ++TTS + S T + T+ + P+FT
Sbjct: 211 TSHSTPSFTSSITTTETTSHDTPSFTSSITTSETPSHSTPSSTSLITTTKTTSHSTPSFT 270
Query: 239 SNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISA--QKETT 296
S+ ++ + F++ T E + N S + E + S SF S+ ETT
Sbjct: 271 SSITTTETTSHSAHSFTSSITTTETTSHNTRSFTSSITTTETNSHSTTSFTSSITTTETT 330
Query: 297 EMEDTDIEDSL 307
S+
Sbjct: 331 SHSTPSFSSSI 341
Score = 35.0 bits (79), Expect = 0.12
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 137 HQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTC 196
H P S S + + T S +++T+ H+ +T T+ + H+
Sbjct: 43 HSTPSFTSSISTTETTSHSTPSF-TSLITITETTSHSTPSYTTSITTTETPS-----HST 96
Query: 197 FENLNSTTITLTTSNSE-SIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFS 255
S T T T S+S S S+ T E TTSH + P+FTS+ ++ + F+
Sbjct: 97 PSYTTSITTTETPSHSTPSFTSSITTTE----TTSH-STPSFTSSIRTTETTSYSTPSFT 151
Query: 256 TINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTE 297
+ N E + + S I E S SF S+ TTE
Sbjct: 152 SSNTITETTSHSTPSYITSITTTETPSSSTPSF-SSSITTTE 192
Score = 29.3 bits (64), Expect = 6.5
Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 14/174 (8%)
Query: 137 HQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTC 196
H P ++ + + T S ++ T T +++ T+ F
Sbjct: 60 HSTPSFTSLITITETTSHSTPSYTTSITTTETPSHSTPSYTTSITTTETPSHSTPSF--- 116
Query: 197 FENLNSTTITLTTSNSE-SIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFS 255
+S T T TTS+S S S+ T E TTS+ + P+FTS++ ++ + +
Sbjct: 117 ---TSSITTTETTSHSTPSFTSSIRTTE----TTSY-STPSFTSSNTITETTSHSTPSYI 168
Query: 256 TINQTVEELNTNKESVIAIFVPAENSKPSVNSFISA--QKETTEMEDTDIEDSL 307
T T E +++ S + E + S F S+ ETT S+
Sbjct: 169 TSITTTETPSSSTPSFSSSITTTETTSHSTPGFTSSITTTETTSHSTPSFTSSI 222
Score = 28.9 bits (63), Expect = 8.5
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 201 NSTTITLTTSNSE-SIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQ 259
+S T T TTS+S S S+ T E TTSH + P+FTS ++ + ++T
Sbjct: 33 SSITTTETTSHSTPSFTSSISTTE----TTSH-STPSFTSLITITETTSHSTPSYTTSIT 87
Query: 260 TVEELNTNKESVIAIFVPAENSKPSVNSFISA--QKETTEMEDTDIEDSL 307
T E + + S E S SF S+ ETT S+
Sbjct: 88 TTETPSHSTPSYTTSITTTETPSHSTPSFTSSITTTETTSHSTPSFTSSI 137
>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 39.3 bits (90), Expect = 0.006
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 269 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 324
ES ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 173 ESALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 232
Query: 325 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 372
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 233 CAEHIEGERARWHQRMSKMSQEICTLKKEKQQDMRRVEELERSLSKLKNQ 282
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 39.3 bits (90), Expect = 0.006
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 269 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 324
ES ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 181 ESALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 240
Query: 325 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 372
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 241 CAEHIEGERARWHQRMSKMSQEICTLKKEKQQDMRRVEELERSLSKLKNQ 290
>gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 39.3 bits (90), Expect = 0.006
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 269 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 324
ES ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 173 ESALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 232
Query: 325 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 372
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 233 CAEHIEGERARWHQRMSKMSQEICTLKKEKQQDMRRVEELERSLSKLKNQ 282
>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 39.3 bits (90), Expect = 0.006
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 269 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 324
ES ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 181 ESALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 240
Query: 325 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 372
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 241 CAEHIEGERARWHQRMSKMSQEICTLKKEKQQDMRRVEELERSLSKLKNQ 290
>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
[Homo sapiens]
Length = 1063
Score = 38.1 bits (87), Expect = 0.014
Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 10/195 (5%)
Query: 129 NIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDT 188
+IV T+ H SS P + +++T + + H+ P T + + T
Sbjct: 15 SIVTTETTSPHTPGFTSSITTTETIPHSTPTFTSLITTSEMTSHS-TPSLTFSITTTKST 73
Query: 189 GRG--GFHTCFENLNST-------TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTS 239
F + + ST T ++TT+ + S T + + T+ + P+FTS
Sbjct: 74 SYSPPSFTSSITSTESTSHSTPPFTSSITTNETTSHSTPSFTTSITKTKTTSHSTPSFTS 133
Query: 240 NSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTEME 299
++ S + F++ T E + N S ++ + E + S SF S+ +T
Sbjct: 134 SNSITDSRSHSTPPFTSSVTTPEMTSHNTPSFMSSIITTETTSHSTPSFTSSTIHSTVSS 193
Query: 300 DTDIEDSLYKDVDYG 314
T S + + G
Sbjct: 194 STTAITSPFTTAETG 208
Score = 33.5 bits (75), Expect = 0.34
Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 20/144 (13%)
Query: 155 KTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSES 214
+T S T ++ K T + TS N T T + TT +T+ N+ S
Sbjct: 105 ETTSHSTPSFTTSITKTKTTSHSTPSFTSSNSITDSRSHSTPPFTSSVTTPEMTSHNTPS 164
Query: 215 IHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAI 274
S+ T E TTSH + P+FTS STI+ TV T S
Sbjct: 165 FMSSIITTE----TTSH-STPSFTS---------------STIHSTVSSSTTAITSPFTT 204
Query: 275 FVPAENSKPSVNSFISAQKETTEM 298
S PS S +S TT +
Sbjct: 205 AETGVTSTPSSPSSLSTDIPTTSL 228
>gi|46852178 potassium channel modulatory factor 1 [Homo sapiens]
Length = 381
Score = 37.7 bits (86), Expect = 0.018
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 27/224 (12%)
Query: 56 LCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNLEDEKEVCPKA 115
L +H P LD G+R++++ P G+ ++++ N+
Sbjct: 132 LTLEHRAPRDLDESSGVRHVRRMFHP----------GRGLGGPRARRSNMHFTSSSTGGL 181
Query: 116 KSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPA--------PKTGSIQNNMLTLN 167
S +S + N + ELL S V+ A P +Q + L
Sbjct: 182 SSSQS------SYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQ 235
Query: 168 LVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEV 227
L +QH LET+ N T R + + +T T +N+ES Q+L+ + L
Sbjct: 236 LERQHAQAARQQLETARNA-TRRTNTSSVTTTITQSTATTNIANTESSQQTLQNSQFLLT 294
Query: 228 TTSHLANPNFTSNSMEIKSAQENPFLFSTINQTV--EELNTNKE 269
+ SME + A + F+ + T+ EE +++ E
Sbjct: 295 RLNDPKMSETERQSMESERADRSLFVQELLLSTLVREESSSSDE 338
>gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens]
Length = 1515
Score = 37.4 bits (85), Expect = 0.024
Identities = 69/322 (21%), Positives = 123/322 (38%), Gaps = 75/322 (23%)
Query: 77 QTAVPTIFSLPEDNQ-GKDPSKKKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDV 135
Q+++ +I SLP D++ D + KKS V P+ +S +T N+ TD+
Sbjct: 834 QSSLTSINSLPSDDELSPDENSKKS----------VVPECHLNDS----KTVLNLGTTDL 879
Query: 136 PHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKP--------------ESTLE 181
P S +L + +G++ N + ++ + P +S+
Sbjct: 880 PKCDDTKKSSITLQQQSVVFSGNLDNETVAIHSLNSSIKDPLQFVFSDEETSSDVKSSCS 939
Query: 182 TSVNQDTGRGGFHTCFENLNSTTITLTTSN-----------SESIHQSLETQE------- 223
+ N DT GF + ++ NST +T ++ S SI + + E
Sbjct: 940 SKPNLDTMCKGFQSPDKSNNSTGTAITLNSKLICLGTPCVISGSISSNTDVSEDRTMKKN 999
Query: 224 --VLEVTTSHLANPNFTSNSMEIKSAQENPFLFST--INQTVEELNTNKESVIAIFVPAE 279
VL +T + P S E +PF ST + Q + E +S I ++
Sbjct: 1000 SDVLNLTQMYSEIPTVES---ETHLGTSDPFSASTDIVKQGLVENYFGSQSSTDI---SD 1053
Query: 280 NSKPSVNSFISAQKETTEMEDTD------------------IEDSLYKDVDYGTEVLQIE 321
S ++ +S QKET+E E ++ +++ Y++ DY I
Sbjct: 1054 TCAVSYSNALSPQKETSEKEISNLQQEQDKEDEEEEQDQQMVQNGYYEETDYSALDGTIN 1113
Query: 322 HSYCRQDINKEHLWQKVSKLHS 343
Y +D E K K++S
Sbjct: 1114 AHYTSRDELMEERLTKSEKINS 1135
>gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens]
Length = 1302
Score = 37.4 bits (85), Expect = 0.024
Identities = 69/322 (21%), Positives = 123/322 (38%), Gaps = 75/322 (23%)
Query: 77 QTAVPTIFSLPEDNQ-GKDPSKKKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDV 135
Q+++ +I SLP D++ D + KKS V P+ +S +T N+ TD+
Sbjct: 621 QSSLTSINSLPSDDELSPDENSKKS----------VVPECHLNDS----KTVLNLGTTDL 666
Query: 136 PHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKP--------------ESTLE 181
P S +L + +G++ N + ++ + P +S+
Sbjct: 667 PKCDDTKKSSITLQQQSVVFSGNLDNETVAIHSLNSSIKDPLQFVFSDEETSSDVKSSCS 726
Query: 182 TSVNQDTGRGGFHTCFENLNSTTITLTTSN-----------SESIHQSLETQE------- 223
+ N DT GF + ++ NST +T ++ S SI + + E
Sbjct: 727 SKPNLDTMCKGFQSPDKSNNSTGTAITLNSKLICLGTPCVISGSISSNTDVSEDRTMKKN 786
Query: 224 --VLEVTTSHLANPNFTSNSMEIKSAQENPFLFST--INQTVEELNTNKESVIAIFVPAE 279
VL +T + P S E +PF ST + Q + E +S I ++
Sbjct: 787 SDVLNLTQMYSEIPTVES---ETHLGTSDPFSASTDIVKQGLVENYFGSQSSTDI---SD 840
Query: 280 NSKPSVNSFISAQKETTEMEDTD------------------IEDSLYKDVDYGTEVLQIE 321
S ++ +S QKET+E E ++ +++ Y++ DY I
Sbjct: 841 TCAVSYSNALSPQKETSEKEISNLQQEQDKEDEEEEQDQQMVQNGYYEETDYSALDGTIN 900
Query: 322 HSYCRQDINKEHLWQKVSKLHS 343
Y +D E K K++S
Sbjct: 901 AHYTSRDELMEERLTKSEKINS 922
>gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens]
Length = 1319
Score = 37.4 bits (85), Expect = 0.024
Identities = 69/322 (21%), Positives = 123/322 (38%), Gaps = 75/322 (23%)
Query: 77 QTAVPTIFSLPEDNQ-GKDPSKKKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDV 135
Q+++ +I SLP D++ D + KKS V P+ +S +T N+ TD+
Sbjct: 638 QSSLTSINSLPSDDELSPDENSKKS----------VVPECHLNDS----KTVLNLGTTDL 683
Query: 136 PHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKP--------------ESTLE 181
P S +L + +G++ N + ++ + P +S+
Sbjct: 684 PKCDDTKKSSITLQQQSVVFSGNLDNETVAIHSLNSSIKDPLQFVFSDEETSSDVKSSCS 743
Query: 182 TSVNQDTGRGGFHTCFENLNSTTITLTTSN-----------SESIHQSLETQE------- 223
+ N DT GF + ++ NST +T ++ S SI + + E
Sbjct: 744 SKPNLDTMCKGFQSPDKSNNSTGTAITLNSKLICLGTPCVISGSISSNTDVSEDRTMKKN 803
Query: 224 --VLEVTTSHLANPNFTSNSMEIKSAQENPFLFST--INQTVEELNTNKESVIAIFVPAE 279
VL +T + P S E +PF ST + Q + E +S I ++
Sbjct: 804 SDVLNLTQMYSEIPTVES---ETHLGTSDPFSASTDIVKQGLVENYFGSQSSTDI---SD 857
Query: 280 NSKPSVNSFISAQKETTEMEDTD------------------IEDSLYKDVDYGTEVLQIE 321
S ++ +S QKET+E E ++ +++ Y++ DY I
Sbjct: 858 TCAVSYSNALSPQKETSEKEISNLQQEQDKEDEEEEQDQQMVQNGYYEETDYSALDGTIN 917
Query: 322 HSYCRQDINKEHLWQKVSKLHS 343
Y +D E K K++S
Sbjct: 918 AHYTSRDELMEERLTKSEKINS 939
>gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 595
Score = 36.6 bits (83), Expect = 0.041
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 269 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 324
E ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 173 ERALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 232
Query: 325 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 372
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 233 CAEHIEGERARWHQRMSKMLQEICTLKKEKQQDMRRVEELERSLSKLKNQ 282
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 36.6 bits (83), Expect = 0.041
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 269 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 324
E ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 181 ERALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 240
Query: 325 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 372
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 241 CAEHIEGERARWHQRMSKMLQEICTLKKEKQQDMRRVEELERSLSKLKNQ 290
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 36.6 bits (83), Expect = 0.041
Identities = 65/310 (20%), Positives = 130/310 (41%), Gaps = 39/310 (12%)
Query: 98 KKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTG 157
K+ +KK E+E++ K E+ ++ + ++ +++ + + S L+ A K
Sbjct: 346 KEERKKQKEEERKRREKEYEEKKNIVKQEREQLISKEKIILREDA--SQQLIISSALKKS 403
Query: 158 SIQNNMLTL------------NLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTI 205
N L+L NLV +++ K E L V + + EN++ TI
Sbjct: 404 GYNNKHLSLEDISNDKGDIAKNLVDENSKKQEDVLLWLVEESNMK-------ENVDRQTI 456
Query: 206 TLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELN 265
L S + +S+ +Q +L N N + ++ +T N+T E N
Sbjct: 457 -LKESIQVKLKESISSQTILADFKMEEKNENLAKKRCSEELVKQERKYENTDNKT-ELGN 514
Query: 266 TNKESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYKD---VDYGTEVLQIEH 322
++ + + P + K AQKE M+ E++ K + + E+ +++
Sbjct: 515 SDLKGNLKEQFPLQELKS------DAQKEEKIMKHVINENTGQKTQIILGHNQEISEVKT 568
Query: 323 SYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQENW-LSEENVK 381
+ Q I K++ +K+ K+ + E++EQ L K + L+ +KQ + L+ EN K
Sbjct: 569 NE-EQKIIKDNQQKKIQKVEKE----EIQEQNGL-LYKDKDTLVISVKQRSLSLTSENSK 622
Query: 382 IIENHFTTYE 391
+ + E
Sbjct: 623 DVRENVILQE 632
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 36.6 bits (83), Expect = 0.041
Identities = 65/310 (20%), Positives = 130/310 (41%), Gaps = 39/310 (12%)
Query: 98 KKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTG 157
K+ +KK E+E++ K E+ ++ + ++ +++ + + S L+ A K
Sbjct: 346 KEERKKQKEEERKRREKEYEEKKNIVKQEREQLISKEKIILREDA--SQQLIISSALKKS 403
Query: 158 SIQNNMLTL------------NLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTI 205
N L+L NLV +++ K E L V + + EN++ TI
Sbjct: 404 GYNNKHLSLEDISNDKGDIAKNLVDENSKKQEDVLLWLVEESNMK-------ENVDRQTI 456
Query: 206 TLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELN 265
L S + +S+ +Q +L N N + ++ +T N+T E N
Sbjct: 457 -LKESIQVKLKESISSQTILADFKMEEKNENLAKKRCSEELVKQERKYENTDNKT-ELGN 514
Query: 266 TNKESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYKD---VDYGTEVLQIEH 322
++ + + P + K AQKE M+ E++ K + + E+ +++
Sbjct: 515 SDLKGNLKEQFPLQELKS------DAQKEEKIMKHVINENTGQKTQIILGHNQEISEVKT 568
Query: 323 SYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQENW-LSEENVK 381
+ Q I K++ +K+ K+ + E++EQ L K + L+ +KQ + L+ EN K
Sbjct: 569 NE-EQKIIKDNQQKKIQKVEKE----EIQEQNGL-LYKDKDTLVISVKQRSLSLTSENSK 622
Query: 382 IIENHFTTYE 391
+ + E
Sbjct: 623 DVRENVILQE 632
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 36.2 bits (82), Expect = 0.053
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 202 STTITLTTSNSESIHQSLETQEVLEVT--TSHLANPNFTSNSMEIKSAQENPFLFSTINQ 259
S T +TT+ S S H L V+ T TSH + P+FTS+ ++ P F+++
Sbjct: 292 SFTSLITTTESTS-HSPLSFTSVITTTESTSH-STPSFTSSIATTETTSHTPPSFTSLIT 349
Query: 260 TVEELNTNKESVIAIFVPAENSKPSVNSFISA 291
T E + + S ++ E++ S SF SA
Sbjct: 350 TTETPSHSNPSFTSLITATESTSHSPPSFTSA 381
Score = 35.4 bits (80), Expect = 0.090
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 202 STTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTV 261
S T +TT+ + S+ T + T+ + P+FTS+ ++ +P F+++ T
Sbjct: 241 SFTSLMTTTETTSLSPPAFTFSISTTETNSHSPPSFTSSIATTETPSHSPPSFTSLITTT 300
Query: 262 EELNTNKESVIAIFVPAENSKPSVNSFIS--AQKETT 296
E + + S ++ E++ S SF S A ETT
Sbjct: 301 ESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETT 337
Score = 32.7 bits (73), Expect = 0.59
Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)
Query: 137 HQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTC 196
H S + + + T SI +++ T + S++ TS F +
Sbjct: 135 HSTASFTSSITTTETTSHSTRSITSSITTTKRTSHSSLSYTSSIATSETPSHTVPSFTSL 194
Query: 197 FENLNST-------TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTS--NSMEIKSA 247
ST T +TT+ + S + T + + T+ + P+FTS + E S
Sbjct: 195 ITTTESTSHSNPSLTSAITTTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSL 254
Query: 248 QENPFLFS-TINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETT 296
F FS + +T + S IA +S PS S I+ + T+
Sbjct: 255 SPPAFTFSISTTETNSHSPPSFTSSIATTETPSHSPPSFTSLITTTESTS 304
Score = 32.7 bits (73), Expect = 0.59
Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 11/163 (6%)
Query: 135 VPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFH 194
+ H P S + + P+ T S ++ T + T S + T+ GF
Sbjct: 697 ISHSTPSYTSSIATTETPSHSTPSFPFSITTTETIPHSTPSLNSAITTTETMSHSIPGF- 755
Query: 195 TCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLF 254
+S T + TTS SL T TTSH + P+FT++ ++ +P F
Sbjct: 756 -----ASSITTSETTSPFPPRFTSLITTTK---TTSH-SPPSFTASLTSTEATSHSPLSF 806
Query: 255 STINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTE 297
+++ + + + + S+ ++ S + +S+ +TT+
Sbjct: 807 TSVIASTKITSQSTPSLTSLITTTGTSSHNTLG-LSSSVDTTK 848
Score = 29.3 bits (64), Expect = 6.5
Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 8/160 (5%)
Query: 131 VNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGR 190
+ T H L ++SS+ P + +L + T +L +++ R
Sbjct: 161 ITTTKRTSHSSLSYTSSIATSETPS--HTVPSFTSLITTTESTSHSNPSLTSAITTTETR 218
Query: 191 GGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQEN 250
F + + TTI T+ ++ S + T E T+ L+ P FT + ++ +
Sbjct: 219 SHSPPIFTS-SITTIETTSHSTPSFTSLMTTTE-----TTSLSPPAFTFSISTTETNSHS 272
Query: 251 PFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFIS 290
P F++ T E + + S ++ E++ S SF S
Sbjct: 273 PPSFTSSIATTETPSHSPPSFTSLITTTESTSHSPLSFTS 312
Score = 28.9 bits (63), Expect = 8.5
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 204 TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLF---STINQT 260
T T TTS+S +L T TTSH + P+FTS+ ++ +P F ST +T
Sbjct: 505 TTTKTTSHSPPSFTALITSTK---TTSH-STPSFTSSIATTETTSHSPPSFTSSSTTTET 560
Query: 261 VEELNTNKESVIAIFVPAENSKPSVNSFISAQKET 295
S IA S P I+ K T
Sbjct: 561 HSHSTPGFSSSIATSKTTSTSPPRFTFAIATTKTT 595
Score = 28.9 bits (63), Expect = 8.5
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 182 TSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNS 241
TS+ TG +T + + T T+ ++ S + T E TTSH P FTS+
Sbjct: 824 TSLITTTGTSSHNTLGLSSSVDTTKTTSHSTASFTSLIATTE----TTSH-NTPGFTSSI 878
Query: 242 MEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISA--QKETTEME 299
+ + F++ T+E + + S ++ ++ S SF S+ ETT
Sbjct: 879 ATTEITSHSTPSFTSSITTMETTSRSSPSFTSLITITGSTSHSTASFTSSITTTETTSHS 938
Query: 300 DTDIEDSL 307
I S+
Sbjct: 939 TPSITSSV 946
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 36.2 bits (82), Expect = 0.053
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 202 STTITLTTSNSESIHQSLETQEVLEVT--TSHLANPNFTSNSMEIKSAQENPFLFSTINQ 259
S T +TT+ S S H L V+ T TSH + P+FTS+ ++ P F+++
Sbjct: 121 SFTSLITTTESTS-HSPLSFTSVITTTESTSH-STPSFTSSIATTETTSHTPPSFTSLIT 178
Query: 260 TVEELNTNKESVIAIFVPAENSKPSVNSFISA 291
T E + + S ++ E++ S SF SA
Sbjct: 179 TTETPSHSNPSFTSLITATESTSHSPPSFTSA 210
Score = 35.4 bits (80), Expect = 0.090
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 202 STTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTV 261
S T +TT+ + S+ T + T+ + P+FTS+ ++ +P F+++ T
Sbjct: 70 SFTSLMTTTETTSLSPPAFTFSISTTETNSHSPPSFTSSIATTETPSHSPPSFTSLITTT 129
Query: 262 EELNTNKESVIAIFVPAENSKPSVNSFIS--AQKETT 296
E + + S ++ E++ S SF S A ETT
Sbjct: 130 ESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETT 166
Score = 32.0 bits (71), Expect = 1.00
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 202 STTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTS--NSMEIKSAQENPFLFS-TIN 258
S T +TT+ + S + T + + T+ + P+FTS + E S F FS +
Sbjct: 36 SLTSAITTTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSLSPPAFTFSISTT 95
Query: 259 QTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETT 296
+T + S IA +S PS S I+ + T+
Sbjct: 96 ETNSHSPPSFTSSIATTETPSHSPPSFTSLITTTESTS 133
Score = 29.3 bits (64), Expect = 6.5
Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 18/170 (10%)
Query: 140 PELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFEN 199
P + + + P+ T S +++ T T S + T+ F +
Sbjct: 386 PSYISLIATTETPSHSTPSFPSSITTTQSASHSTPSLTSAISTTEAMSHSIPVFTSLITT 445
Query: 200 LNST-----------TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQ 248
+T T T TTS+S +L T TTSH + P+FTS+ ++
Sbjct: 446 TETTSHLPPRFTSLITTTKTTSHSPPSFTALITSTK---TTSH-STPSFTSSIATTETTS 501
Query: 249 ENPFLF---STINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKET 295
+P F ST +T S IA S P I+ K T
Sbjct: 502 HSPPSFTSSSTTTETHSHSTPGFSSSIATSKTTSTSPPRFTFAIATTKTT 551
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 36.2 bits (82), Expect = 0.053
Identities = 62/320 (19%), Positives = 128/320 (40%), Gaps = 49/320 (15%)
Query: 103 KNLEDEKEVCPKAK-----SEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTG 157
+NL+ EKE+ ++ ES + + +N++ T++ L S + K
Sbjct: 782 ENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETK------- 834
Query: 158 SIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQ 217
Q + ++ + LE V Q HT NL+ + +
Sbjct: 835 --QRLSSQIEKLEHEISHLKKKLENEVEQR------HTLTRNLDVQLLDTKRQLDTETNL 886
Query: 218 SLETQEVLEVTTSHLANPNFTSNSMEIKSAQEN---------------PFLFSTINQTVE 262
L T+E+L+ +A ++ME++ A ++ L S + QT E
Sbjct: 887 HLNTKELLKNAQKEIATLKQHLSNMEVQVASQSSQRTGKGQPSNKEDVDDLVSQLRQTEE 946
Query: 263 ELNTNKESVIAIFVPAENSKPSVNSF---ISAQKETTEMEDTDIEDSLYKDVDYGTE--- 316
++N KE + E + V S ++ +K+ TE +IE L + ++ T+
Sbjct: 947 QVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEK 1006
Query: 317 -VLQIEHSYCRQDINK----EHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQ 371
++++E +K E + Q++S+L ++ ++ + Q+ L R + + +Q ++
Sbjct: 1007 KLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARR 1066
Query: 372 ENWLSEENVKIIENHFTTYE 391
+ +E KI YE
Sbjct: 1067 D---CQEQAKIAVEAQNKYE 1083
>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
Length = 783
Score = 35.8 bits (81), Expect = 0.069
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 319 QIEHSYCRQDINKEHLWQKVSKLHSKITLLELKEQ-------QTLGRLKSLEALIRQLKQ 371
+++ Y + ++ L+Q V +LH ++ L+ KE Q R++ EAL++QL+
Sbjct: 395 KVKQQYQEEQQKRKLLYQNVDELHRQVRTLQDKENLLEMTCSQQQSRIQQQEALLKQLEN 454
Query: 372 ENWLSEENVK 381
E +E+VK
Sbjct: 455 EKRKYDEHVK 464
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,330,165
Number of Sequences: 37866
Number of extensions: 708473
Number of successful extensions: 2922
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 2767
Number of HSP's gapped (non-prelim): 249
length of query: 395
length of database: 18,247,518
effective HSP length: 104
effective length of query: 291
effective length of database: 14,309,454
effective search space: 4164051114
effective search space used: 4164051114
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.