Guide to the Human Genome
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Name: THAP9 Sequence: fasta or formatted (903aa) NCBI GI: 94536788
Description:

THAP domain containing 9

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         48           1
 C cysteine            2.7         24           1
 D aspartate           4.3         39           2
 E glutamate           4.8         43           2
 F phenylalanine       5.3         48           2
 G glycine             4.3         39           1
 H histidine           3.3         30           2
 I isoleucine          6.0         54           3
 K lysine              7.6         69           3
 L leucine            12.8        116           2
 M methionine          1.7         15           1
 N asparagine          4.3         39           2
 P proline             3.2         29           2
 Q glutamine           5.2         47           2
 R arginine            5.0         45           2
 S serine              9.4         85           4
 T threonine           4.4         40           1
 V valine              5.5         50           2
 W tryptophan          1.3         12           1
 Y tyrosine            3.4         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   THAP domain containing 9 
THAP6                 0.039   THAP domain containing 6 
THAP7                 0.032   THAP domain containing 7 isoform 2 
THAP7                 0.032   THAP domain containing 7 isoform 1 
THAP2                 0.027   THAP domain containing, apoptosis associated protein...
THAP5                 0.017   THAP domain containing 5 isoform 1 
THAP3                 0.016   THAP domain containing, apoptosis associated protein...
THAP4                 0.016   THAP domain containing 4 
THAP1                 0.013   THAP domain containing, apoptosis associated protein ...
THAP8                 0.009   THAP domain containing 8 
PRKRIR                0.008   protein-kinase, interferon-inducible double stranded...
TEX9                  0.006   testis expressed 9 
THAP11                0.006   THAP domain containing 11 
THAP5                 0.006   THAP domain containing 5 isoform 2 
PIK3C2G               0.004   phosphoinositide-3-kinase, class 2 gamma polypeptid...
PPP1R14D              0.003   protein phosphatase 1, regulatory subunit 14D isofo...
FBXL18                0.003   F-box and leucine-rich repeat protein 18 
EIF2AK1               0.003   eukaryotic translation initiation factor 2-alpha kin...
ANKRD6                0.003   ankyrin repeat domain 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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