Guide to the Human Genome
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Name: FAM135A Sequence: fasta or formatted (1319aa) NCBI GI: 157671937
Description:

hypothetical protein LOC57579 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {1302aa} hypothetical protein LOC57579 isoform b
alt prot {1515aa} hypothetical protein LOC57579 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         60           2
 C cysteine            2.1         28           1
 D aspartate           5.9         78           2
 E glutamate           7.5         99           4
 F phenylalanine       4.5         59           2
 G glycine             3.9         51           2
 H histidine           3.2         42           3
 I isoleucine          5.5         73           2
 K lysine              5.5         73           2
 L leucine            11.5        152           3
 M methionine          2.0         26           1
 N asparagine          4.9         64           2
 P proline             4.4         58           2
 Q glutamine           4.2         55           3
 R arginine            3.3         43           2
 S serine             11.8        156           2
 T threonine           6.2         82           2
 V valine              5.6         74           3
 W tryptophan          0.5          6           1
 Y tyrosine            3.0         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57579 isoform a 
FAM135A               0.954   hypothetical protein LOC57579 isoform b 
FAM135A               0.678   hypothetical protein LOC57579 isoform c 
FAM135B               0.190   hypothetical protein LOC51059 
DSPP                  0.010   dentin sialophosphoprotein preproprotein 
MYH9                  0.007   myosin, heavy polypeptide 9, non-muscle 
MUC16                 0.005   mucin 16 
HRC                   0.005   histidine rich calcium binding protein precursor [Hom...
THAP5                 0.005   THAP domain containing 5 isoform 2 
THAP5                 0.005   THAP domain containing 5 isoform 1 
KIAA1462              0.005   hypothetical protein LOC57608 
SPARCL1               0.005   SPARC-like 1 
SPARCL1               0.005   SPARC-like 1 
GALK2                 0.005   galactokinase 2 isoform 2 
GALK2                 0.005   galactokinase 2 isoform 1 
PHIP                  0.004   pleckstrin homology domain interacting protein [Homo...
MUC21                 0.004   mucin 21 
ANKRD31               0.004   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.004   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.004   PREDICTED: ankyrin repeat domain 31 
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
MYT1                  0.004   myelin transcription factor 1 
TAF7L                 0.004   TATA box binding protein-associated factor, RNA poly...
LOC644893             0.004   PREDICTED: hypothetical protein 
LOC644893             0.004   PREDICTED: hypothetical protein 
KIF5C                 0.004   kinesin family member 5C 
CANX                  0.004   calnexin precursor 
CANX                  0.004   calnexin precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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