Guide to the Human Genome
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Name: THAP2 Sequence: fasta or formatted (228aa) NCBI GI: 13899259
Description:

THAP domain containing, apoptosis associated protein 2

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         14           3
 C cysteine            3.5          8           1
 D aspartate           3.1          7           1
 E glutamate           4.8         11           1
 F phenylalanine       4.8         11           1
 G glycine             2.2          5           1
 H histidine           3.1          7           1
 I isoleucine          4.8         11           2
 K lysine             11.8         27           2
 L leucine            11.4         26           2
 M methionine          2.6          6           1
 N asparagine          5.7         13           2
 P proline             4.8         11           1
 Q glutamine           3.5          8           2
 R arginine            7.5         17           2
 S serine              8.3         19           2
 T threonine           7.0         16           2
 V valine              3.1          7           1
 W tryptophan          0.9          2           1
 Y tyrosine            0.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   THAP domain containing, apoptosis associated protein... 
THAP1                 0.183   THAP domain containing, apoptosis associated protein ...
THAP3                 0.128   THAP domain containing, apoptosis associated protein...
THAP9                 0.112   THAP domain containing 9 
THAP6                 0.108   THAP domain containing 6 
THAP4                 0.098   THAP domain containing 4 
THAP5                 0.098   THAP domain containing 5 isoform 1 
PRKRIR                0.094   protein-kinase, interferon-inducible double stranded...
THAP7                 0.087   THAP domain containing 7 isoform 2 
THAP7                 0.087   THAP domain containing 7 isoform 1 
THAP8                 0.085   THAP domain containing 8 
THAP10                0.048   THAP domain containing 10 
THAP5                 0.046   THAP domain containing 5 isoform 2 
SYNE2                 0.030   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.030   spectrin repeat containing, nuclear envelope 2 isof...
THAP11                0.025   THAP domain containing 11 
CYTSB                 0.014   spectrin domain with coiled-coils 1 NSP5a3b 
CYTSB                 0.014   spectrin domain with coiled-coils 1 NSP5a3a 
CYTSB                 0.014   spectrin domain with coiled-coils 1 NSP5b3b 
CYTSB                 0.014   spectrin domain with coiled-coils 1 NSP5b3a 
HMMR                  0.014   hyaluronan-mediated motility receptor isoform c [Ho...
DYX1C1                0.011   dyslexia susceptibility 1 candidate 1 isoform c [Hom...
DYX1C1                0.011   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
DYX1C1                0.011   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
TBC1D1                0.011   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
C10orf96              0.011   hypothetical protein LOC374355 
KIAA1407              0.011   hypothetical protein LOC57577 
MYO5A                 0.011   myosin VA isoform 2 
MYO5A                 0.011   myosin VA isoform 1 
WDR44                 0.011   WD repeat domain 44 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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