Guide to the Human Genome
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Name: THAP1 Sequence: fasta or formatted (213aa) NCBI GI: 8922446
Description:

THAP domain containing, apoptosis associated protein 1 isoform 1

Referenced in:

Zinc Finger Proteins

Other entries for this name:
alt prot [53aa] THAP domain containing, apoptosis associated protein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8          8           2
 C cysteine            4.2          9           1
 D aspartate           5.2         11           2
 E glutamate           8.9         19           1
 F phenylalanine       4.2          9           1
 G glycine             1.4          3           1
 H histidine           3.3          7           1
 I isoleucine          2.8          6           1
 K lysine             10.3         22           2
 L leucine             8.9         19           2
 M methionine          1.4          3           1
 N asparagine          3.8          8           2
 P proline             9.4         20           4
 Q glutamine           6.6         14           2
 R arginine            6.1         13           2
 S serine              4.7         10           2
 T threonine           4.2          9           1
 V valine              7.5         16           2
 W tryptophan          0.5          1           1
 Y tyrosine            2.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   THAP domain containing, apoptosis associated protein ... 
THAP2                 0.189   THAP domain containing, apoptosis associated protein...
THAP3                 0.170   THAP domain containing, apoptosis associated protein...
THAP4                 0.135   THAP domain containing 4 
THAP5                 0.111   THAP domain containing 5 isoform 1 
THAP8                 0.099   THAP domain containing 8 
THAP1                 0.076   THAP domain containing, apoptosis associated protein...
THAP6                 0.073   THAP domain containing 6 
THAP9                 0.057   THAP domain containing 9 
THAP5                 0.054   THAP domain containing 5 isoform 2 
BZRAP1                0.045   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.045   peripheral benzodiazepine receptor-associated prote...
THAP7                 0.045   THAP domain containing 7 isoform 2 
THAP7                 0.045   THAP domain containing 7 isoform 1 
PRKRIR                0.035   protein-kinase, interferon-inducible double stranded...
LOC651807             0.035   PREDICTED: hypothetical protein 
MICALCL               0.033   MICAL C-terminal like 
SFRS17A               0.033   DNA segment on chromosome X and Y (unique) 155 expre...
MLLT4                 0.028   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.028   myeloid/lymphoid or mixed-lineage leukemia (trithora...
MLLT4                 0.028   myeloid/lymphoid or mixed-lineage leukemia (trithora...
ZNF853                0.026   zinc finger protein 853 
LOC100133758          0.024   PREDICTED: hypothetical protein, partial 
LOC647042             0.024   PREDICTED: hypothetical protein isoform 1 
LOC727832             0.024   golgi autoantigen, golgin subfamily a-like 
LOC100289169          0.024   PREDICTED: hypothetical protein XP_002343477 
LOC728741             0.024   PREDICTED: hypothetical protein 
LOC728734             0.024   PREDICTED: similar to NPIP-like protein ENSP0000028...
NPIPL1                0.024   PREDICTED: nuclear pore complex interacting protein...
LOC400352             0.024   PREDICTED: similar to Putative golgin subfamily A m...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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