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Search of human proteins with 193211610
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|193211610 dipeptidase 3 isoform b [Homo sapiens]
(512 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|193211610 dipeptidase 3 isoform b [Homo sapiens] 1013 0.0
gi|193211608 dipeptidase 3 isoform a [Homo sapiens] 1008 0.0
gi|11641269 dipeptidase 2 precursor [Homo sapiens] 642 0.0
gi|189458885 dipeptidase 1 [Homo sapiens] 337 2e-92
gi|4758190 dipeptidase 1 [Homo sapiens] 337 2e-92
gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens] 37 0.043
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens] 37 0.043
gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens] 37 0.043
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 35 0.21
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 34 0.36
gi|169166423 PREDICTED: hypothetical protein [Homo sapiens] 34 0.36
gi|18079216 CASK interacting protein 1 [Homo sapiens] 33 0.81
gi|116284392 mucin 2 precursor [Homo sapiens] 33 0.81
gi|38683827 ADAM metallopeptidase with thrombospondin type 1 mot... 33 0.81
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 32 1.1
gi|15529998 solute carrier family 9 (sodium/hydrogen exchanger),... 32 1.1
gi|169162130 PREDICTED: tetratricopeptide repeat domain 34 [Homo... 32 1.4
gi|13899255 membrane frizzled-related protein [Homo sapiens] 32 1.4
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 32 1.4
gi|18780273 collagen, type XXI, alpha 1 precursor [Homo sapiens] 32 1.4
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 32 1.4
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 32 1.4
gi|156938336 class II transactivator [Homo sapiens] 31 2.4
gi|117938768 GNAS complex locus alex [Homo sapiens] 31 2.4
gi|239757650 PREDICTED: hypothetical protein [Homo sapiens] 31 2.4
gi|239752141 PREDICTED: hypothetical protein XP_002348152 [Homo ... 31 2.4
gi|239746671 PREDICTED: hypothetical protein XP_002343829 [Homo ... 31 2.4
gi|239742474 PREDICTED: hypothetical protein [Homo sapiens] 31 3.1
gi|109150431 ring finger protein 31 [Homo sapiens] 31 3.1
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens] 30 4.0
>gi|193211610 dipeptidase 3 isoform b [Homo sapiens]
Length = 512
Score = 1013 bits (2619), Expect = 0.0
Identities = 512/512 (100%), Positives = 512/512 (100%)
Query: 1 MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR 60
MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR
Sbjct: 1 MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR 60
Query: 61 AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD 120
AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD
Sbjct: 61 AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD 120
Query: 121 GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR 180
GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR
Sbjct: 121 GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR 180
Query: 181 LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG 240
LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG
Sbjct: 181 LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG 240
Query: 241 VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI 300
VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI
Sbjct: 241 VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI 300
Query: 301 RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKNGGIVMVTLSMGVLQCNLLANVS 360
RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKNGGIVMVTLSMGVLQCNLLANVS
Sbjct: 301 RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKNGGIVMVTLSMGVLQCNLLANVS 360
Query: 361 TVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGV 420
TVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGV
Sbjct: 361 TVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGV 420
Query: 421 LRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQPT 480
LRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQPT
Sbjct: 421 LRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQPT 480
Query: 481 NRVPWRSSNASPYLVPGLVAAATIPTFTQWLC 512
NRVPWRSSNASPYLVPGLVAAATIPTFTQWLC
Sbjct: 481 NRVPWRSSNASPYLVPGLVAAATIPTFTQWLC 512
>gi|193211608 dipeptidase 3 isoform a [Homo sapiens]
Length = 513
Score = 1008 bits (2607), Expect = 0.0
Identities = 512/513 (99%), Positives = 512/513 (99%), Gaps = 1/513 (0%)
Query: 1 MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR 60
MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR
Sbjct: 1 MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR 60
Query: 61 AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD 120
AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD
Sbjct: 61 AETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVD 120
Query: 121 GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR 180
GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR
Sbjct: 121 GHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVR 180
Query: 181 LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG 240
LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG
Sbjct: 181 LALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLG 240
Query: 241 VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI 300
VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI
Sbjct: 241 VRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLI 300
Query: 301 RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLL-KNGGIVMVTLSMGVLQCNLLANV 359
RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLL KNGGIVMVTLSMGVLQCNLLANV
Sbjct: 301 RRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKKNGGIVMVTLSMGVLQCNLLANV 360
Query: 360 STVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQG 419
STVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQG
Sbjct: 361 STVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQG 420
Query: 420 VLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQP 479
VLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQP
Sbjct: 421 VLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQP 480
Query: 480 TNRVPWRSSNASPYLVPGLVAAATIPTFTQWLC 512
TNRVPWRSSNASPYLVPGLVAAATIPTFTQWLC
Sbjct: 481 TNRVPWRSSNASPYLVPGLVAAATIPTFTQWLC 513
>gi|11641269 dipeptidase 2 precursor [Homo sapiens]
Length = 486
Score = 642 bits (1656), Expect = 0.0
Identities = 343/494 (69%), Positives = 391/494 (79%), Gaps = 16/494 (3%)
Query: 26 MQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTRAETTPGAPRALSTLGSPSLFTTPGV 85
MQP+G EG R L LLLLLLLL QPVT A TTPG PRAL+TLG+P T PG
Sbjct: 1 MQPSGLEGPGTFGRWPLLSLLLLLLLL---QPVTCAYTTPGPPRALTTLGAPRAHTMPG- 56
Query: 86 PSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNF 145
T TT +P T L+ +A+ALMR FPLVDGHNDLP VLRQ Y+ LQDVNLRNF
Sbjct: 57 ----TYAPSTTLSSPSTQGLQEQARALMRDFPLVDGHNDLPLVLRQVYQKGLQDVNLRNF 112
Query: 146 SHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSA 205
S+GQTSLDRLRDGLVGAQFWSA V CQ+QD+ A+RL LEQIDLI RMCASYSELELVTSA
Sbjct: 113 SYGQTSLDRLRDGLVGAQFWSAYVPCQTQDRDALRLTLEQIDLIRRMCASYSELELVTSA 172
Query: 206 EGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHM 265
+ LN +QKLACLIGVEGGHSLD+SLS+LR+FY+LGVRYLTLT TC+TPWAESS K H
Sbjct: 173 KALNDTQKLACLIGVEGGHSLDNSLSILRTFYMLGVRYLTLTHTCNTPWAESSAKGVHSF 232
Query: 266 YTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNL 325
Y N+SGLT FGEKVV E+NRLGMM+DLS+ SD + RR LEVSQAPVIFSHSAAR VC++
Sbjct: 233 YNNISGLTDFGEKVVAEMNRLGMMVDLSHVSDAVARRALEVSQAPVIFSHSAARGVCNSA 292
Query: 326 LNVPDDILQLL-KNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNY 384
NVPDDILQLL KNGG+VMV+LSMGV+QCN ANVSTVADHFDHI+AVIGS+FIGIGG+Y
Sbjct: 293 RNVPDDILQLLKKNGGVVMVSLSMGVIQCNPSANVSTVADHFDHIKAVIGSKFIGIGGDY 352
Query: 385 DGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSP 444
DG G+FPQGLEDVSTYPVLIEELLSR WSEEELQGVLRGNLLRVFRQVEKV+EE++ QSP
Sbjct: 353 DGAGKFPQGLEDVSTYPVLIEELLSRGWSEEELQGVLRGNLLRVFRQVEKVQEENKWQSP 412
Query: 445 VEAEFPYGQLSTSCHSHL--VPQNGHQATHLEVTKQP---TNRVP--WRSSNASPYLVPG 497
+E +FP QLS+SCHS L + Q + E+T+ P T ++P W S +SP++ P
Sbjct: 413 LEDKFPDEQLSSSCHSDLSRLRQRQSLTSGQELTEIPIHWTAKLPAKWSVSESSPHMAPV 472
Query: 498 LVAAATIPTFTQWL 511
L AT P WL
Sbjct: 473 LAVVATFPVLILWL 486
>gi|189458885 dipeptidase 1 [Homo sapiens]
Length = 411
Score = 337 bits (864), Expect = 2e-92
Identities = 179/374 (47%), Positives = 243/374 (64%), Gaps = 9/374 (2%)
Query: 106 RGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQD--VNLRNFSHGQTSLDRLRDGLVGAQ 163
R A+ +MR P++DGHNDLP L + N LQD NL + T++ +LR G VG Q
Sbjct: 20 RDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQ 79
Query: 164 FWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELEL-VTSAEGLNSS---QKLACLIG 219
FWS C +Q++ AVR LEQ+D++HRMC Y E L VTS+ G+ + K+A LIG
Sbjct: 80 FWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIG 139
Query: 220 VEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKV 279
VEGGHS+DSSL VLR+ Y LG+RYLTLT +C+TPWA++ GL+ FG++V
Sbjct: 140 VEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRV 199
Query: 280 VEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKN- 338
V+ELNRLG++IDL++ S ++ L++S+APVIFSHS+A +VC + NVPDD+L+L+K
Sbjct: 200 VKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQT 259
Query: 339 GGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVS 398
+VMV + C AN+S VADH DHI+ V G+ +G GG++DG R P+GLEDVS
Sbjct: 260 DSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVS 319
Query: 399 TYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSC 458
YP LI ELL R+W+E E++G L NLLRVF VE+ + Q+P E P QL SC
Sbjct: 320 KYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQA--SNLTQAPEEEPIPLDQLGGSC 377
Query: 459 HSHLVPQNGHQATH 472
+H +G + H
Sbjct: 378 RTHYGYSSGASSLH 391
>gi|4758190 dipeptidase 1 [Homo sapiens]
Length = 411
Score = 337 bits (864), Expect = 2e-92
Identities = 179/374 (47%), Positives = 243/374 (64%), Gaps = 9/374 (2%)
Query: 106 RGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQD--VNLRNFSHGQTSLDRLRDGLVGAQ 163
R A+ +MR P++DGHNDLP L + N LQD NL + T++ +LR G VG Q
Sbjct: 20 RDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQ 79
Query: 164 FWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELEL-VTSAEGLNSS---QKLACLIG 219
FWS C +Q++ AVR LEQ+D++HRMC Y E L VTS+ G+ + K+A LIG
Sbjct: 80 FWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIG 139
Query: 220 VEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKV 279
VEGGHS+DSSL VLR+ Y LG+RYLTLT +C+TPWA++ GL+ FG++V
Sbjct: 140 VEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRV 199
Query: 280 VEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKN- 338
V+ELNRLG++IDL++ S ++ L++S+APVIFSHS+A +VC + NVPDD+L+L+K
Sbjct: 200 VKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQT 259
Query: 339 GGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVS 398
+VMV + C AN+S VADH DHI+ V G+ +G GG++DG R P+GLEDVS
Sbjct: 260 DSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVS 319
Query: 399 TYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSC 458
YP LI ELL R+W+E E++G L NLLRVF VE+ + Q+P E P QL SC
Sbjct: 320 KYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQA--SNLTQAPEEEPIPLDQLGGSC 377
Query: 459 HSHLVPQNGHQATH 472
+H +G + H
Sbjct: 378 RTHYGYSSGASSLH 391
>gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]
Length = 660
Score = 37.0 bits (84), Expect = 0.043
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 16 PGSRGR-----PPRNMQPTGREGSRALSRRYLRRLLLLL-LLLLLRQPVTRAETTPGAPR 69
PG +G PP P G++G + Y RLL LL + L PV + T G
Sbjct: 148 PGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQS 207
Query: 70 ALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTL 103
S G P PG L PGL P P L
Sbjct: 208 QASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 241
>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
Length = 686
Score = 37.0 bits (84), Expect = 0.043
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 16 PGSRGR-----PPRNMQPTGREGSRALSRRYLRRLLLLL-LLLLLRQPVTRAETTPGAPR 69
PG +G PP P G++G + Y RLL LL + L PV + T G
Sbjct: 186 PGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQS 245
Query: 70 ALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTL 103
S G P PG L PGL P P L
Sbjct: 246 QASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 279
>gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens]
Length = 698
Score = 37.0 bits (84), Expect = 0.043
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Query: 16 PGSRGR-----PPRNMQPTGREGSRALSRRYLRRLLLLL-LLLLLRQPVTRAETTPGAPR 69
PG +G PP P G++G + Y RLL LL + L PV + T G
Sbjct: 186 PGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQS 245
Query: 70 ALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTL 103
S G P PG L PGL P P L
Sbjct: 246 QASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 279
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 34.7 bits (78), Expect = 0.21
Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 6 LSASA---HRLLLPGS--RGRPPRNMQPTGREGSRAL-SRRYLRRLLLLLLLLLLRQPVT 59
LSA+A H L P S +GR PR P+ S S+R RR + LL R P T
Sbjct: 324 LSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRLLEGRGPQT 383
Query: 60 RAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPG 98
+ P AP + S + P +PS L+ GL TPG
Sbjct: 384 PRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPG 422
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 33.9 bits (76), Expect = 0.36
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 54 LRQPVTRAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTL 103
L P+ A +P AP +L TL SP P ++TTP + P + +T+
Sbjct: 337 LATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTI 386
>gi|169166423 PREDICTED: hypothetical protein [Homo sapiens]
Length = 286
Score = 33.9 bits (76), Expect = 0.36
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 64 TPGAPRALSTLGSPSLFT--TPGVPSALTTPGLTTPGTPK 101
TP PR G+PSL T P VP A TP L TP P+
Sbjct: 33 TPQVPRVPCAQGTPSLQTPQVPRVPCAQGTPSLQTPQVPR 72
Score = 33.9 bits (76), Expect = 0.36
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 64 TPGAPRALSTLGSPSLFT--TPGVPSALTTPGLTTPGTPK 101
TP PR G+PSL T P VP A TP L TP P+
Sbjct: 50 TPQVPRVPCAQGTPSLQTPQVPRVPCAQGTPSLQTPQVPR 89
Score = 33.9 bits (76), Expect = 0.36
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 64 TPGAPRALSTLGSPSLFT--TPGVPSALTTPGLTTPGTPK 101
TP PR G+PSL T P VP A TP L TP P+
Sbjct: 67 TPQVPRVPCAQGTPSLQTPQVPRVPCAQGTPSLQTPQVPR 106
Score = 33.9 bits (76), Expect = 0.36
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 64 TPGAPRALSTLGSPSLFT--TPGVPSALTTPGLTTPGTPK 101
TP PR G+PSL T P VP A TP L TP P+
Sbjct: 84 TPQVPRVPCAQGTPSLQTPQVPRVPCAQGTPSLQTPQVPR 123
Score = 32.0 bits (71), Expect = 1.4
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 59 TRAET--TPGAPRALSTLGSPSLFT--TPGVPSALTTPGLTTPGTPK 101
TRA TP P G+PSL T P VP A TP L TP P+
Sbjct: 9 TRASVCRTPQIPHVPCAQGTPSLQTPQVPRVPCAQGTPSLQTPQVPR 55
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 32.7 bits (73), Expect = 0.81
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 4 TPLSASAHRLLLPG-SRGRPPRNMQPTGREGSRALSRRYLR------RLLLLLLLLLLRQ 56
+P+S S LL G + G PPR +P GR G ++ R + R +L
Sbjct: 719 SPMSRSQEYLLDEGPAPGTPPREARP-GRHG-HSIKRASVPPVPGKPRQVLPPGTSHFTP 776
Query: 57 PVTRAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTL 103
P T +T PG+P+AL P+ T P+ P P +P++L
Sbjct: 777 PQTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLPPTERPMSPRSL 823
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 32.7 bits (73), Expect = 0.81
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 63 TTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKT 102
TTP P +ST +P TTP P+ +P TTP P T
Sbjct: 1452 TTPSPP--ISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTT 1489
Score = 32.3 bits (72), Expect = 1.1
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 22 PPRNMQP-TGREGSRALSRRYLRRLLLLLLLLLLRQPVTRAETTPGAPRALS---TLGSP 77
PP + P T R S L+ LL L + T +TP AP S TL P
Sbjct: 4215 PPESSTPQTSRSTSSPLTES---TTLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPP 4271
Query: 78 SLFTT--PGVPSALTTPGLTTPGTPKTL 103
TT PG P+ TT G ++ TP T+
Sbjct: 4272 PSTTTSPPGTPTRGTTTGSSSAPTPSTV 4299
Score = 32.0 bits (71), Expect = 1.4
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 63 TTPGAPRALSTLGSPSLFTTPGVP-SALTTPGLTTPGTPKT 102
TTP +P ++T +PS TTP P + +TTP TT +P T
Sbjct: 1703 TTPSSP--ITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPT 1741
Score = 30.8 bits (68), Expect = 3.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 63 TTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKT 102
TTP P +T P+ +P + + T P TTP P T
Sbjct: 1436 TTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTT 1475
Score = 30.8 bits (68), Expect = 3.1
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 57 PVTRAETTPGAPRALSTLGSPSLFTTPGVPSALTT--PGLTTPGTPKT 102
P TTP P +T P+ TTP P+ TT P TTP P T
Sbjct: 1578 PSPPTTTTPSPPTITTTTPPPT--TTPSPPTTTTTTPPPTTTPSPPTT 1623
Score = 30.0 bits (66), Expect = 5.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 63 TTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTP 100
TTP P +T P+ +P + + T P TTP P
Sbjct: 1420 TTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPP 1457
Score = 29.6 bits (65), Expect = 6.8
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 63 TTPGAPRALSTLGSPSLFTTPGVPSALTT--PGLTTPGTPKT 102
TTP P A +T P+ TTP P+ TT P TTP P T
Sbjct: 1505 TTPITPPASTTTLPPT--TTPSPPTTTTTTPPPTTTPSPPTT 1544
Score = 29.6 bits (65), Expect = 6.8
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 57 PVTRAETTPGAPRALSTLGSPSLFTTPGVPSALTT--PGLTTPGTPKT 102
P + TTP P +T+ +PS TTP P TT TTP P T
Sbjct: 1681 PSSPITTTPSPP--TTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPT 1726
>gi|38683827 ADAM metallopeptidase with thrombospondin type 1 motif, 7
preproprotein [Homo sapiens]
Length = 1686
Score = 32.7 bits (73), Expect = 0.81
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 25/96 (26%)
Query: 55 RQPVTRAETTPG------APRALSTLGSPSLFTTPGVPSA----LTTPGLTTPGTPKTLD 104
R P +E TPG P + +G+P L G+PS ++T GL TP TP++
Sbjct: 1139 RSPPPPSEQTPGNPLINFLPEEDTPIGAPDL----GLPSLSWPRVSTDGLQTPATPES-- 1192
Query: 105 LRGRAQALMRSFPL-VDGHNDLPQVLRQRYKNVLQD 139
FP+ D + LP R R V +D
Sbjct: 1193 --------QNDFPVGKDSQSQLPPPWRDRTNEVFKD 1220
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 32.3 bits (72), Expect = 1.1
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 9/88 (10%)
Query: 22 PPRNMQP-TGREGSRALSRRYLRRLLLLLLLLLLRQPVTRAETTPGAPRALS---TLGSP 77
PP + P T R S L+ LL L + T +TP AP S TL P
Sbjct: 1675 PPESSTPQTSRSTSSPLTES---TTLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPP 1731
Query: 78 SLFTT--PGVPSALTTPGLTTPGTPKTL 103
TT PG P+ TT G ++ TP T+
Sbjct: 1732 PSTTTSPPGTPTRGTTTGSSSAPTPSTV 1759
>gi|15529998 solute carrier family 9 (sodium/hydrogen exchanger),
member 2 [Homo sapiens]
Length = 812
Score = 32.3 bits (72), Expect = 1.1
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 46 LLLLLLLLLRQPV-TRAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLT 95
+LLLLLL + PV AET APRA+ T SP P+++ PG T
Sbjct: 17 MLLLLLLQVAGPVGALAETLLNAPRAMGTSSSPP------SPASVVAPGTT 61
>gi|169162130 PREDICTED: tetratricopeptide repeat domain 34 [Homo
sapiens]
Length = 901
Score = 32.0 bits (71), Expect = 1.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 56 QPVTRAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQA 111
+P ++A +P P GSPS T P +P + T L +P ++ + G +QA
Sbjct: 28 EPWSQAHGSPTHPNHTCEAGSPSSSTAPDLPPCVPTELLLSPWPTRSDHINGGSQA 83
>gi|13899255 membrane frizzled-related protein [Homo sapiens]
Length = 579
Score = 32.0 bits (71), Expect = 1.4
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 20 GRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTRAETTPGAPRALSTLGSPSL 79
GR PR ++P R L L LLLLLL LL+ + + + P + + S L + L
Sbjct: 53 GRRPRGLRPDCRFSW--LCVLLLSSLLLLLLGLLVAIILAQLQAAPPSGASHSPLPAGGL 110
Query: 80 FTTPGVPSALTTPGLTTP 97
TT P+ T+ TP
Sbjct: 111 TTTTTTPTITTSQAAGTP 128
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 32.0 bits (71), Expect = 1.4
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 65 PGAPRALSTLGSPSLFTTPGVPSALTTPGLT-TPGTP 100
PG P ++G P L PG P A PGL PGTP
Sbjct: 1091 PGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTP 1127
Score = 29.3 bits (64), Expect = 8.9
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 65 PGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTP 100
PG P +G P L PG PGL PG P
Sbjct: 824 PGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPP 859
>gi|18780273 collagen, type XXI, alpha 1 precursor [Homo sapiens]
Length = 957
Score = 32.0 bits (71), Expect = 1.4
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 16 PGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTR-------AETTPGAP 68
PG +G P + +P GRE S R+ ++ L +LL+ R +PG P
Sbjct: 772 PGPQGPPGLDGKP-GREFSEQFIRQVCTDVIRAQLPVLLQSGRIRNCDHCLSQHGSPGIP 830
Query: 69 RALSTLGSPSLFTTPGVPSALTTPGLT-TPGTPKTLDLRG 107
+G PG+P PGL PG P L+G
Sbjct: 831 GPPGPIGPEGPRGLPGLPGRDGVPGLVGVPGRPGVRGLKG 870
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 32.0 bits (71), Expect = 1.4
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 65 PGAPRALSTLGSPSLFTTPGVPSALTTPGLT-TPGTP 100
PG P ++G P L PG P A PGL PGTP
Sbjct: 1091 PGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTP 1127
Score = 29.3 bits (64), Expect = 8.9
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 65 PGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTP 100
PG P +G P L PG PGL PG P
Sbjct: 824 PGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPP 859
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 32.0 bits (71), Expect = 1.4
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 65 PGAPRALSTLGSPSLFTTPGVPSALTTPGLT-TPGTP 100
PG P ++G P L PG P A PGL PGTP
Sbjct: 1091 PGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTP 1127
Score = 29.3 bits (64), Expect = 8.9
Identities = 14/36 (38%), Positives = 15/36 (41%)
Query: 65 PGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTP 100
PG P +G P L PG PGL PG P
Sbjct: 824 PGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPP 859
>gi|156938336 class II transactivator [Homo sapiens]
Length = 1130
Score = 31.2 bits (69), Expect = 2.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 72 STLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVDGHNDLP 126
S + PS FT G+P++ PG T+P P DL + + S + H P
Sbjct: 264 SQVPPPSGFTVHGLPTSPDRPGSTSPFAPSATDLPSMPEPALTSRANMTEHKTSP 318
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 31.2 bits (69), Expect = 2.4
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 64 TPGAPRALSTLGSPSLFTTPGVPSALTTPG-------LTTPGTPKT 102
TPG P+ + T G TPG + TPG + TPG P T
Sbjct: 341 TPGQPQKIPTPGQHQPILTPGHSQPIPTPGQPLPPQPIPTPGRPLT 386
>gi|239757650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 129
Score = 31.2 bits (69), Expect = 2.4
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 60 RAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQA 111
RA T G +L SP+LF PG AL P L G + +G+ A
Sbjct: 19 RAPTDAGGLGYSLSLSSPTLFLFPGCTHALVMPNLEQQGKERKWQRKGKEMA 70
>gi|239752141 PREDICTED: hypothetical protein XP_002348152 [Homo
sapiens]
Length = 129
Score = 31.2 bits (69), Expect = 2.4
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 60 RAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQA 111
RA T G +L SP+LF PG AL P L G + +G+ A
Sbjct: 19 RAPTDAGGLGYSLSLSSPTLFLFPGCTHALVMPNLEQQGKERKWQRKGKEMA 70
>gi|239746671 PREDICTED: hypothetical protein XP_002343829 [Homo
sapiens]
Length = 129
Score = 31.2 bits (69), Expect = 2.4
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 60 RAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQA 111
RA T G +L SP+LF PG AL P L G + +G+ A
Sbjct: 19 RAPTDAGGLGYSLSLSSPTLFLFPGCTHALVMPNLEQQGKERKWQRKGKEMA 70
>gi|239742474 PREDICTED: hypothetical protein [Homo sapiens]
Length = 589
Score = 30.8 bits (68), Expect = 3.1
Identities = 39/139 (28%), Positives = 55/139 (39%), Gaps = 17/139 (12%)
Query: 8 ASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTRAETTPGA 67
+SA LLL RG P + P + S RR++L+ + +P +
Sbjct: 5 SSALGLLLCSGRGSPSTELWP-----QQVHSWESGRRVVLMR--------ASEGGASPPS 51
Query: 68 PRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKT---LDLRGRAQALMRSFPLVDGHND 124
LGSP + P LT G +PG P+ +D R AQ + R V
Sbjct: 52 CTVSLALGSPLPWPEPDRSHGLTGSGKVSPGLPQAHPQVDSRTTAQQVTRVAVAVSTRPA 111
Query: 125 LPQVLRQRYKNVL-QDVNL 142
LP L + K L + VNL
Sbjct: 112 LPLPLPEGSKRSLWEPVNL 130
>gi|109150431 ring finger protein 31 [Homo sapiens]
Length = 1072
Score = 30.8 bits (68), Expect = 3.1
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 76 SPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFP-LVDGHNDLPQVLRQRYK 134
+P TTP VP + P P TL QAL + L GH LRQ
Sbjct: 200 APGPLTTPSVPGSTPGPCFLCGSAPGTLHCPSCKQALCPACDHLFHGHPSRAHHLRQTLP 259
Query: 135 NVLQDVNL 142
VLQ +L
Sbjct: 260 GVLQGTHL 267
>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
Length = 1142
Score = 30.4 bits (67), Expect = 4.0
Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Query: 59 TRAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLT-------TPGTPKTLDLRGRAQA 111
T A+ G P G P L TPG P PG PG P L L G A
Sbjct: 631 TGAQGPAGEPGIQGPRGLPGLPGTPGTPGNDGVPGRDGKPGLPGPPGDPIALPLLGDIGA 690
Query: 112 LMRSF 116
L+++F
Sbjct: 691 LLKNF 695
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,777,377
Number of Sequences: 37866
Number of extensions: 940948
Number of successful extensions: 4087
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 3883
Number of HSP's gapped (non-prelim): 204
length of query: 512
length of database: 18,247,518
effective HSP length: 107
effective length of query: 405
effective length of database: 14,195,856
effective search space: 5749321680
effective search space used: 5749321680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.