Guide to the Human Genome
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Name: DPEP3 Sequence: fasta or formatted (513aa) NCBI GI: 193211608
Description:

dipeptidase 3 isoform a

Referenced in:

Metalloproteases

Other entries for this name:
alt prot [512aa] dipeptidase 3 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         32           3
 C cysteine            1.6          8           1
 D aspartate           3.5         18           2
 E glutamate           4.9         25           3
 F phenylalanine       2.9         15           1
 G glycine             7.2         37           2
 H histidine           2.7         14           2
 I isoleucine          2.9         15           1
 K lysine              1.8          9           2
 L leucine            14.6         75          10
 M methionine          1.8          9           2
 N asparagine          3.5         18           1
 P proline             5.7         29           2
 Q glutamine           4.9         25           1
 R arginine            8.0         41           2
 S serine              9.9         51           2
 T threonine           7.0         36           2
 V valine              7.8         40           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dipeptidase 3 isoform a 
DPEP3                 0.993   dipeptidase 3 isoform b 
DPEP2                 0.630   dipeptidase 2 precursor 
DPEP1                 0.320   dipeptidase 1 
DPEP1                 0.320   dipeptidase 1 
COL13A1               0.012   alpha 1 type XIII collagen isoform 16 
COL13A1               0.012   alpha 1 type XIII collagen isoform 11 
COL13A1               0.012   alpha 1 type XIII collagen isoform 4 
MBD6                  0.010   methyl-CpG binding domain protein 6 
FLJ22184              0.009   PREDICTED: hypothetical protein FLJ22184 
LOC100128084          0.009   PREDICTED: hypothetical protein 
CASKIN1               0.008   CASK interacting protein 1 
MUC2                  0.008   mucin 2 precursor 
ADAMTS7               0.008   ADAM metallopeptidase with thrombospondin type 1 mot...
LOC100294420          0.007   PREDICTED: similar to mucin 2 
SLC9A2                0.007   solute carrier family 9 (sodium/hydrogen exchanger),...
TTC34                 0.007   PREDICTED: tetratricopeptide repeat domain 34 [Homo...
MFRP                  0.007   membrane frizzled-related protein 
COL4A5                0.007   type IV collagen alpha 5 isoform 2 precursor 
COL21A1               0.007   collagen, type XXI, alpha 1 precursor 
COL4A5                0.007   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.007   type IV collagen alpha 5 isoform 3 precursor 
CIITA                 0.006   class II transactivator 
GNAS                  0.006   GNAS complex locus alex 
LOC100292439          0.006   PREDICTED: hypothetical protein 
LOC100290392          0.006   PREDICTED: hypothetical protein XP_002348152 
LOC100286925          0.006   PREDICTED: hypothetical protein XP_002343829 
DEF6                  0.006   differentially expressed in FDCP 6 homolog 
LOC100132605          0.006   PREDICTED: hypothetical protein 
RNF31                 0.006   ring finger protein 31 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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