Guide to the Human Genome
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Name: DPEP2 Sequence: fasta or formatted (486aa) NCBI GI: 11641269
Description:

dipeptidase 2 precursor

Referenced in:

Metalloproteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         33           2
 C cysteine            1.6          8           1
 D aspartate           4.9         24           2
 E glutamate           4.9         24           3
 F phenylalanine       2.9         14           1
 G glycine             7.4         36           2
 H histidine           2.5         12           1
 I isoleucine          3.3         16           1
 K lysine              3.1         15           2
 L leucine            13.8         67           8
 M methionine          2.3         11           2
 N asparagine          3.3         16           2
 P proline             5.6         27           2
 Q glutamine           5.3         26           1
 R arginine            5.6         27           2
 S serine              9.3         45           3
 T threonine           5.8         28           2
 V valine              7.8         38           2
 W tryptophan          1.6          8           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dipeptidase 2 precursor 
DPEP3                 0.659   dipeptidase 3 isoform a 
DPEP3                 0.652   dipeptidase 3 isoform b 
DPEP1                 0.357   dipeptidase 1 
DPEP1                 0.357   dipeptidase 1 
ST8SIA6               0.008   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
LTBP4                 0.008   latent transforming growth factor beta binding prot...
HIVEP2                0.008   human immunodeficiency virus type I enhancer bindin...
TNXB                  0.007   tenascin XB isoform 1 precursor 
FGD5                  0.006   FYVE, RhoGEF and PH domain containing 5 
COL4A4                0.005   alpha 4 type IV collagen precursor 
SHANK1                0.005   SH3 and multiple ankyrin repeat domains 1 
IL11                  0.005   interleukin 11 precursor 
C19orf24              0.005   hypothetical protein LOC55009 
MIER2                 0.005   mesoderm induction early response 1, family member 2...
EWSR1                 0.005   Ewing sarcoma breakpoint region 1 isoform 4 
MUC2                  0.005   mucin 2 precursor 
CCHCR1                0.005   coiled-coil alpha-helical rod protein 1 isoform 1 [...
CCHCR1                0.005   coiled-coil alpha-helical rod protein 1 isoform 2 [...
CCHCR1                0.005   coiled-coil alpha-helical rod protein 1 isoform 3 [...
ProSAPiP1             0.005   ProSAPiP1 protein 
TMEM108               0.005   transmembrane protein 108 
TMEM108               0.005   transmembrane protein 108 
C20orf117             0.005   hypothetical protein LOC140710 
TRPV1                 0.004   transient receptor potential cation channel, subfami...
TRPV1                 0.004   transient receptor potential cation channel, subfami...
TRPV1                 0.004   transient receptor potential cation channel, subfami...
TRPV1                 0.004   transient receptor potential cation channel, subfami...
LOC644893             0.004   PREDICTED: hypothetical protein 
LOC644893             0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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